View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1126_low_23 (Length: 523)

Name: NF1126_low_23
Description: NF1126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1126_low_23
NF1126_low_23
[»] chr3 (72 HSPs)
chr3 (30-517)||(45093861-45094346)
chr3 (426-517)||(36665158-36665251)
chr3 (429-517)||(32285207-32285297)
chr3 (397-517)||(32951136-32951257)
chr3 (413-517)||(35717870-35717976)
chr3 (426-517)||(7671341-7671434)
chr3 (443-517)||(51062530-51062606)
chr3 (429-517)||(17053004-17053094)
chr3 (443-514)||(49057999-49058072)
chr3 (443-517)||(37833040-37833116)
chr3 (397-498)||(53066531-53066631)
chr3 (429-517)||(21907136-21907226)
chr3 (429-517)||(38492191-38492281)
chr3 (429-517)||(38833803-38833893)
chr3 (397-498)||(4238494-4238594)
chr3 (443-517)||(7459865-7459941)
chr3 (443-517)||(43137991-43138067)
chr3 (420-517)||(29728120-29728219)
chr3 (443-508)||(48706891-48706958)
chr3 (429-517)||(10571175-10571265)
chr3 (445-513)||(25097234-25097304)
chr3 (443-515)||(52668531-52668605)
chr3 (429-517)||(54840159-54840249)
chr3 (411-517)||(3547433-3547542)
chr3 (443-517)||(1327452-1327528)
chr3 (443-517)||(8559050-8559126)
chr3 (443-517)||(18659192-18659268)
chr3 (429-498)||(47638216-47638285)
chr3 (443-517)||(54673918-54673994)
chr3 (412-517)||(15503163-15503270)
chr3 (426-515)||(48143905-48143996)
chr3 (429-517)||(45167439-45167529)
chr3 (440-498)||(901047-901105)
chr3 (440-498)||(34669650-34669708)
chr3 (440-498)||(36179095-36179153)
chr3 (440-498)||(50673719-50673777)
chr3 (460-517)||(10435274-10435333)
chr3 (466-508)||(9145648-9145690)
chr3 (440-498)||(9484638-9484696)
chr3 (440-498)||(12948082-12948140)
chr3 (456-498)||(18013429-18013471)
chr3 (440-498)||(29455667-29455725)
chr3 (440-498)||(29793337-29793395)
chr3 (440-498)||(34263663-34263721)
chr3 (440-498)||(42098586-42098644)
chr3 (419-517)||(46483690-46483788)
chr3 (440-498)||(49076385-49076443)
chr3 (440-498)||(53274954-53275012)
chr3 (455-517)||(3086281-3086345)
chr3 (445-498)||(34555198-34555251)
chr3 (445-498)||(38833924-38833977)
chr3 (453-498)||(44057542-44057587)
chr3 (443-498)||(5030034-5030089)
chr3 (451-498)||(23631551-23631598)
chr3 (451-498)||(48927761-48927808)
chr3 (440-498)||(1778403-1778461)
chr3 (456-498)||(4464939-4464981)
chr3 (440-498)||(4945810-4945868)
chr3 (451-481)||(30080715-30080745)
chr3 (440-498)||(32961288-32961346)
chr3 (444-498)||(35135764-35135818)
chr3 (440-498)||(43370333-43370391)
chr3 (456-498)||(47340043-47340085)
chr3 (443-496)||(21271897-21271950)
chr3 (445-498)||(26759526-26759579)
chr3 (441-490)||(39557546-39557595)
chr3 (443-517)||(48690193-48690269)
chr3 (443-495)||(1778216-1778268)
chr3 (460-517)||(27849091-27849150)
chr3 (465-517)||(28690656-28690707)
chr3 (451-495)||(30681939-30681983)
chr3 (446-498)||(54684627-54684679)
[»] chr2 (65 HSPs)
chr2 (397-517)||(43925074-43925195)
chr2 (419-517)||(7106418-7106518)
chr2 (419-517)||(4083347-4083447)
chr2 (437-517)||(1110432-1110514)
chr2 (397-517)||(39418020-39418141)
chr2 (446-517)||(38137579-38137652)
chr2 (426-508)||(332423-332507)
chr2 (443-517)||(38963659-38963735)
chr2 (397-517)||(20517558-20517679)
chr2 (411-517)||(13399118-13399226)
chr2 (443-517)||(18718379-18718455)
chr2 (420-517)||(42038663-42038762)
chr2 (429-517)||(9877114-9877204)
chr2 (455-517)||(3987289-3987353)
chr2 (443-517)||(44283324-44283400)
chr2 (420-517)||(7442913-7443012)
chr2 (397-517)||(42020203-42020325)
chr2 (429-517)||(30708868-30708958)
chr2 (429-517)||(40598269-40598359)
chr2 (443-517)||(14372217-14372293)
chr2 (443-517)||(16941856-16941932)
chr2 (443-517)||(17012521-17012597)
chr2 (411-517)||(24282973-24283081)
chr2 (429-498)||(32775934-32776003)
chr2 (443-517)||(34827052-34827128)
chr2 (443-517)||(41172802-41172878)
chr2 (420-517)||(41463539-41463638)
chr2 (445-517)||(27559715-27559789)
chr2 (429-517)||(44330524-44330614)
chr2 (443-517)||(14707580-14707655)
chr2 (455-517)||(23671516-23671580)
chr2 (455-517)||(36199008-36199072)
chr2 (455-517)||(40425306-40425370)
chr2 (440-498)||(7724574-7724632)
chr2 (440-498)||(8373476-8373534)
chr2 (440-498)||(8896313-8896371)
chr2 (440-498)||(12209031-12209089)
chr2 (440-498)||(38963837-38963895)
chr2 (440-498)||(40471778-40471836)
chr2 (427-517)||(4045262-4045354)
chr2 (445-498)||(16127743-16127796)
chr2 (443-492)||(30776245-30776294)
chr2 (445-498)||(41436879-41436932)
chr2 (441-514)||(18733968-18734043)
chr2 (443-498)||(3037874-3037929)
chr2 (459-498)||(4137470-4137509)
chr2 (439-498)||(5096289-5096348)
chr2 (443-498)||(42951545-42951599)
chr2 (451-498)||(43328764-43328811)
chr2 (445-508)||(2831754-2831819)
chr2 (453-517)||(4045990-4046055)
chr2 (440-498)||(6075167-6075225)
chr2 (440-498)||(16126045-16126103)
chr2 (456-498)||(37987899-37987941)
chr2 (453-498)||(5030339-5030384)
chr2 (445-498)||(10333541-10333594)
chr2 (440-481)||(11277593-11277634)
chr2 (445-498)||(27668005-27668058)
chr2 (445-498)||(32776168-32776221)
chr2 (441-498)||(33046199-33046256)
chr2 (455-517)||(43409425-43409489)
chr2 (445-498)||(45036410-45036463)
chr2 (459-508)||(11383996-11384047)
chr2 (450-498)||(15177421-15177469)
chr2 (451-495)||(41491995-41492039)
[»] chr8 (56 HSPs)
chr8 (411-517)||(20167590-20167698)
chr8 (443-517)||(25256473-25256549)
chr8 (443-517)||(31127850-31127926)
chr8 (413-517)||(10658117-10658223)
chr8 (426-513)||(886097-886186)
chr8 (429-517)||(6470985-6471075)
chr8 (429-517)||(18809416-18809506)
chr8 (429-517)||(30380670-30380760)
chr8 (413-508)||(44123819-44123916)
chr8 (443-517)||(13138177-13138253)
chr8 (429-517)||(3293132-3293222)
chr8 (412-508)||(45253895-45253993)
chr8 (443-517)||(14847349-14847425)
chr8 (443-517)||(23248992-23249068)
chr8 (443-517)||(29791082-29791158)
chr8 (443-517)||(30290064-30290140)
chr8 (443-517)||(43066266-43066342)
chr8 (419-498)||(3383569-3383648)
chr8 (429-517)||(8350911-8351001)
chr8 (429-517)||(37710039-37710129)
chr8 (445-517)||(38845747-38845821)
chr8 (443-517)||(1580810-1580886)
chr8 (426-508)||(12893677-12893761)
chr8 (444-517)||(2805522-2805597)
chr8 (420-517)||(2986465-2986564)
chr8 (440-498)||(40645651-40645709)
chr8 (443-517)||(38739797-38739873)
chr8 (445-498)||(38842210-38842263)
chr8 (455-517)||(39361265-39361329)
chr8 (429-515)||(40013793-40013881)
chr8 (455-517)||(45081952-45082016)
chr8 (448-517)||(11854665-11854736)
chr8 (445-514)||(20671303-20671374)
chr8 (451-498)||(4327080-4327127)
chr8 (443-498)||(13888591-13888646)
chr8 (429-517)||(14522520-14522609)
chr8 (459-515)||(23764510-23764568)
chr8 (440-498)||(21132889-21132947)
chr8 (440-498)||(25691558-25691616)
chr8 (440-498)||(30464474-30464532)
chr8 (443-514)||(35584117-35584190)
chr8 (445-514)||(29917871-29917942)
chr8 (429-517)||(6470645-6470735)
chr8 (451-498)||(17523858-17523905)
chr8 (451-498)||(23547121-23547168)
chr8 (451-498)||(29616287-29616334)
chr8 (451-498)||(30653413-30653460)
chr8 (459-498)||(44039886-44039925)
chr8 (440-498)||(3466325-3466383)
chr8 (440-498)||(8496847-8496905)
chr8 (445-498)||(9302399-9302453)
chr8 (456-498)||(15870233-15870275)
chr8 (456-498)||(25009202-25009244)
chr8 (445-498)||(43184740-43184793)
chr8 (451-495)||(11335390-11335434)
chr8 (458-498)||(23437774-23437814)
[»] chr7 (49 HSPs)
chr7 (411-517)||(44389299-44389407)
chr7 (412-517)||(18795154-18795261)
chr7 (429-517)||(37231594-37231684)
chr7 (429-517)||(47713533-47713623)
chr7 (429-517)||(48531462-48531552)
chr7 (429-517)||(44479752-44479842)
chr7 (421-517)||(46657773-46657871)
chr7 (443-517)||(32618987-32619063)
chr7 (429-498)||(34478039-34478108)
chr7 (443-517)||(36819836-36819912)
chr7 (429-514)||(21392161-21392248)
chr7 (411-517)||(31497722-31497825)
chr7 (429-517)||(10464146-10464236)
chr7 (429-517)||(31466389-31466479)
chr7 (429-517)||(35500778-35500868)
chr7 (443-517)||(2400425-2400501)
chr7 (455-517)||(36859265-36859329)
chr7 (429-517)||(4612118-4612208)
chr7 (429-517)||(23474000-23474090)
chr7 (429-517)||(36643302-36643392)
chr7 (429-517)||(47538063-47538153)
chr7 (443-517)||(37950990-37951066)
chr7 (443-517)||(42086683-42086759)
chr7 (455-517)||(42834349-42834413)
chr7 (443-517)||(47081120-47081196)
chr7 (443-508)||(28185456-28185523)
chr7 (444-517)||(36905666-36905741)
chr7 (443-498)||(7314309-7314364)
chr7 (429-517)||(19072909-19072999)
chr7 (420-508)||(33613362-33613451)
chr7 (444-498)||(42493563-42493617)
chr7 (444-517)||(31110765-31110840)
chr7 (441-517)||(27248788-27248866)
chr7 (440-498)||(16807110-16807168)
chr7 (440-498)||(30462185-30462243)
chr7 (440-498)||(38069093-38069151)
chr7 (445-498)||(9173300-9173353)
chr7 (440-497)||(23348398-23348455)
chr7 (451-498)||(28016168-28016215)
chr7 (420-478)||(22127312-22127370)
chr7 (440-498)||(25273981-25274039)
chr7 (456-498)||(26651173-26651215)
chr7 (470-517)||(29770546-29770595)
chr7 (420-478)||(40535551-40535609)
chr7 (445-498)||(38850749-38850802)
chr7 (453-498)||(40348568-40348613)
chr7 (450-494)||(2450851-2450895)
chr7 (419-498)||(23734190-23734270)
chr7 (451-499)||(40818660-40818708)
[»] chr4 (71 HSPs)
chr4 (412-515)||(51736968-51737073)
chr4 (444-517)||(19525760-19525835)
chr4 (413-514)||(50033163-50033266)
chr4 (429-517)||(18360004-18360094)
chr4 (429-517)||(25644499-25644589)
chr4 (429-517)||(36602834-36602924)
chr4 (397-515)||(6922940-6923059)
chr4 (396-517)||(23603646-23603768)
chr4 (413-508)||(50035685-50035782)
chr4 (443-517)||(19170584-19170660)
chr4 (443-517)||(28152131-28152207)
chr4 (443-517)||(28166414-28166490)
chr4 (429-515)||(39260163-39260251)
chr4 (443-517)||(46803772-46803848)
chr4 (420-517)||(4264274-4264373)
chr4 (429-517)||(6494728-6494820)
chr4 (429-517)||(7738850-7738940)
chr4 (429-508)||(4209508-4209589)
chr4 (426-517)||(39194052-39194145)
chr4 (443-517)||(3442389-3442465)
chr4 (443-517)||(3901184-3901260)
chr4 (443-517)||(20678633-20678709)
chr4 (443-517)||(26205749-26205825)
chr4 (443-517)||(47278322-47278398)
chr4 (429-498)||(55190597-55190666)
chr4 (429-517)||(3443418-3443508)
chr4 (429-517)||(5123188-5123278)
chr4 (426-517)||(19631448-19631542)
chr4 (419-515)||(19652277-19652375)
chr4 (429-517)||(45198371-45198461)
chr4 (429-517)||(46212381-46212471)
chr4 (443-517)||(5735411-5735487)
chr4 (443-517)||(19633894-19633970)
chr4 (455-517)||(37688090-37688154)
chr4 (443-517)||(47579426-47579502)
chr4 (443-517)||(49768585-49768661)
chr4 (450-498)||(53568512-53568560)
chr4 (429-517)||(1377172-1377261)
chr4 (445-517)||(5744130-5744204)
chr4 (440-498)||(3708295-3708353)
chr4 (419-517)||(23256075-23256175)
chr4 (443-508)||(55997260-55997327)
chr4 (443-517)||(10181128-10181203)
chr4 (443-498)||(18881320-18881375)
chr4 (443-498)||(19731211-19731266)
chr4 (440-498)||(8525379-8525437)
chr4 (440-498)||(31152703-31152761)
chr4 (440-498)||(43447207-43447265)
chr4 (470-517)||(50971599-50971648)
chr4 (440-498)||(53987743-53987801)
chr4 (443-517)||(21858964-21859040)
chr4 (443-517)||(21914827-21914903)
chr4 (443-517)||(39786402-39786478)
chr4 (445-498)||(47834107-47834160)
chr4 (445-498)||(48380520-48380573)
chr4 (426-498)||(27976598-27976670)
chr4 (439-498)||(28914409-28914468)
chr4 (440-499)||(33394119-33394178)
chr4 (439-498)||(37164057-37164116)
chr4 (453-517)||(39195545-39195611)
chr4 (451-498)||(43047440-43047487)
chr4 (443-498)||(48336642-48336697)
chr4 (451-498)||(50684973-50685020)
chr4 (443-498)||(55014420-55014475)
chr4 (456-498)||(1613181-1613223)
chr4 (440-498)||(10384890-10384948)
chr4 (440-498)||(28909803-28909861)
chr4 (440-498)||(39171000-39171058)
chr4 (455-517)||(14958139-14958203)
chr4 (445-498)||(46608260-46608313)
chr4 (455-508)||(26660559-26660614)
[»] chr1 (53 HSPs)
chr1 (419-517)||(3529316-3529416)
chr1 (411-517)||(21034542-21034650)
chr1 (429-517)||(16265173-16265263)
chr1 (429-517)||(16266302-16266392)
chr1 (443-517)||(24982491-24982567)
chr1 (429-517)||(3898602-3898692)
chr1 (397-517)||(4605139-4605260)
chr1 (429-517)||(29161983-29162073)
chr1 (413-517)||(31971402-31971508)
chr1 (397-517)||(37281232-37281353)
chr1 (443-517)||(23569719-23569795)
chr1 (429-498)||(26441795-26441864)
chr1 (429-498)||(43680231-43680300)
chr1 (409-498)||(47222376-47222465)
chr1 (429-517)||(25531918-25532008)
chr1 (443-498)||(38737877-38737932)
chr1 (426-517)||(50481416-50481509)
chr1 (429-498)||(16751484-16751553)
chr1 (443-517)||(42708640-42708716)
chr1 (443-517)||(50876504-50876580)
chr1 (444-517)||(50539400-50539475)
chr1 (429-515)||(14075876-14075963)
chr1 (429-517)||(30529081-30529171)
chr1 (429-517)||(38458870-38458960)
chr1 (429-517)||(1849840-1849931)
chr1 (419-496)||(27581039-27581116)
chr1 (443-517)||(39354309-39354385)
chr1 (443-517)||(52379129-52379205)
chr1 (443-515)||(27990760-27990834)
chr1 (429-517)||(32988380-32988470)
chr1 (445-517)||(49805299-49805373)
chr1 (443-517)||(48219687-48219763)
chr1 (455-517)||(48264868-48264932)
chr1 (397-514)||(38737378-38737496)
chr1 (426-517)||(48376288-48376378)
chr1 (451-498)||(2138997-2139044)
chr1 (439-498)||(26543909-26543968)
chr1 (440-498)||(10100481-10100539)
chr1 (440-498)||(10124151-10124209)
chr1 (439-517)||(23330592-23330673)
chr1 (456-498)||(36035744-36035786)
chr1 (456-498)||(49903653-49903695)
chr1 (443-517)||(41501652-41501728)
chr1 (451-498)||(6017417-6017464)
chr1 (451-498)||(7075298-7075345)
chr1 (451-498)||(38786914-38786961)
chr1 (440-498)||(45299360-45299418)
chr1 (440-498)||(48312070-48312128)
chr1 (453-498)||(3555259-3555304)
chr1 (445-498)||(23337854-23337907)
chr1 (453-498)||(30005775-30005820)
chr1 (453-498)||(31698638-31698683)
chr1 (445-510)||(40883458-40883525)
[»] chr6 (39 HSPs)
chr6 (412-517)||(13206967-13207074)
chr6 (429-517)||(8796189-8796279)
chr6 (397-517)||(16696016-16696137)
chr6 (429-517)||(25163304-25163394)
chr6 (411-514)||(19068784-19068889)
chr6 (429-517)||(18992043-18992133)
chr6 (429-517)||(30237307-30237397)
chr6 (443-517)||(20662104-20662180)
chr6 (455-517)||(29986215-29986279)
chr6 (429-517)||(25435551-25435641)
chr6 (443-517)||(7097918-7097994)
chr6 (443-517)||(24150881-24150957)
chr6 (443-517)||(33121682-33121758)
chr6 (444-517)||(643477-643552)
chr6 (439-498)||(2141609-2141668)
chr6 (429-517)||(11114705-11114795)
chr6 (429-517)||(22020416-22020506)
chr6 (440-498)||(6142475-6142533)
chr6 (440-498)||(29514994-29515052)
chr6 (443-517)||(31854958-31855034)
chr6 (440-498)||(9022882-9022940)
chr6 (440-498)||(17496286-17496344)
chr6 (440-498)||(24798514-24798572)
chr6 (440-498)||(24825207-24825265)
chr6 (445-498)||(12869382-12869435)
chr6 (445-498)||(30699308-30699361)
chr6 (453-517)||(19788633-19788699)
chr6 (456-498)||(2397828-2397870)
chr6 (440-498)||(2656638-2656696)
chr6 (440-498)||(2667293-2667351)
chr6 (443-481)||(3686954-3686992)
chr6 (456-498)||(4890094-4890136)
chr6 (440-498)||(16969420-16969478)
chr6 (452-498)||(17417682-17417728)
chr6 (440-498)||(31708935-31708993)
chr6 (456-498)||(32541445-32541487)
chr6 (453-498)||(16434598-16434643)
chr6 (443-499)||(6612220-6612276)
chr6 (453-481)||(34500928-34500956)
[»] chr5 (54 HSPs)
chr5 (429-517)||(16048225-16048315)
chr5 (429-517)||(22613740-22613830)
chr5 (397-517)||(37843575-37843696)
chr5 (429-517)||(39405904-39405994)
chr5 (426-517)||(41411185-41411278)
chr5 (411-517)||(2864094-2864202)
chr5 (429-517)||(4299864-4299954)
chr5 (429-517)||(14475261-14475351)
chr5 (443-515)||(25563642-25563716)
chr5 (429-517)||(37516285-37516375)
chr5 (429-517)||(39036550-39036640)
chr5 (426-517)||(1830795-1830888)
chr5 (443-517)||(19868731-19868807)
chr5 (443-517)||(43517105-43517181)
chr5 (426-498)||(19087644-19087716)
chr5 (412-517)||(30779760-30779867)
chr5 (429-517)||(970278-970368)
chr5 (429-517)||(5212953-5213043)
chr5 (429-517)||(32002045-32002135)
chr5 (429-517)||(35290426-35290516)
chr5 (429-517)||(39894921-39895011)
chr5 (426-517)||(40316262-40316355)
chr5 (443-517)||(4924883-4924959)
chr5 (443-517)||(23988717-23988793)
chr5 (443-517)||(42148447-42148523)
chr5 (429-517)||(40512711-40512801)
chr5 (429-498)||(5364585-5364654)
chr5 (429-498)||(43067382-43067451)
chr5 (444-517)||(29627408-29627483)
chr5 (445-498)||(33402555-33402608)
chr5 (443-517)||(35448042-35448118)
chr5 (443-517)||(38698103-38698179)
chr5 (450-498)||(15268554-15268602)
chr5 (429-517)||(32334669-32334759)
chr5 (440-498)||(1098217-1098275)
chr5 (440-498)||(13548255-13548313)
chr5 (440-498)||(14057750-14057808)
chr5 (440-498)||(20022902-20022960)
chr5 (440-498)||(20040379-20040437)
chr5 (440-498)||(41263093-41263151)
chr5 (445-498)||(30788252-30788305)
chr5 (451-498)||(30211705-30211752)
chr5 (456-498)||(1781109-1781151)
chr5 (440-498)||(14633049-14633107)
chr5 (419-461)||(15268602-15268644)
chr5 (440-498)||(19344663-19344721)
chr5 (443-481)||(25773387-25773425)
chr5 (448-498)||(27477702-27477752)
chr5 (456-498)||(27675598-27675640)
chr5 (456-498)||(28142986-28143028)
chr5 (467-517)||(5985008-5985060)
chr5 (441-498)||(21961388-21961445)
chr5 (445-498)||(25946177-25946230)
chr5 (453-498)||(35641824-35641869)
[»] scaffold0459 (1 HSPs)
scaffold0459 (429-517)||(12892-12982)
[»] scaffold0366 (2 HSPs)
scaffold0366 (429-517)||(10533-10623)
scaffold0366 (429-517)||(14199-14289)
[»] scaffold0027 (1 HSPs)
scaffold0027 (443-515)||(117463-117537)
[»] scaffold0092 (1 HSPs)
scaffold0092 (443-517)||(44153-44229)
[»] scaffold0604 (1 HSPs)
scaffold0604 (456-517)||(1254-1317)
[»] scaffold0111 (1 HSPs)
scaffold0111 (409-498)||(38243-38332)
[»] scaffold0051 (1 HSPs)
scaffold0051 (443-517)||(41262-41338)
[»] scaffold0007 (1 HSPs)
scaffold0007 (429-517)||(15247-15337)
[»] scaffold0221 (1 HSPs)
scaffold0221 (440-498)||(5418-5476)
[»] scaffold0001 (1 HSPs)
scaffold0001 (440-498)||(184008-184066)
[»] scaffold0204 (1 HSPs)
scaffold0204 (443-498)||(24164-24219)
[»] scaffold0500 (1 HSPs)
scaffold0500 (440-498)||(639-697)
[»] scaffold0340 (1 HSPs)
scaffold0340 (429-495)||(14502-14568)
[»] scaffold1248 (1 HSPs)
scaffold1248 (445-498)||(1420-1473)
[»] scaffold0952 (1 HSPs)
scaffold0952 (445-498)||(840-893)
[»] scaffold0281 (1 HSPs)
scaffold0281 (456-514)||(13162-13222)


Alignment Details
Target: chr3 (Bit Score: 370; Significance: 0; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 30 - 517
Target Start/End: Complemental strand, 45094346 - 45093861
Alignment:
Q  30 agttagtgtgtaacgttacatgcatggttatgccaattatcatacctctctccaaaaccctccaaaactaattgccactactcttctagctagttaagaa 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||    
T  45094346 agttagtgtgtaacgttacatgcatggttatgccaattatcatacctctctccaaaaccctccaaaactaattgccactactcttctag----ttaagaa 45094251  T
Q  130 aagtggaaaacttgaaagaaaaattagtgttatagggatcaaattaacaaagtagtactccaacttaagtgaaatggcgtgtgtagaaagcaaggttaag 229  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45094250 aagtggaagacttgaaagaaaaacgagtgttatagggatcaaattaacaaagtagtactccaacttaagtgaaatggcgtgtgtagaaaacaaggttaag 45094151  T
Q  230 gaatgattgtgtgcgtttctcatcccattcatcatggctttgcagcttcatattgggaaacggtgcttggttggttgctctgtaacgtttcaacctcatg 329  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45094150 gaatgattgtgtgcgtttctcatcccattcatcatggttttgcagcttcatattgggaaacggtgcttggttggttgctctgtaacgtttcaacctcatg 45094051  T
Q  330 ttatgttatgtgcactcc----taaaagtttgagctgtannnnnnnnatacacattttccatgaaaaattctactccctccgtttcctcaatggatgatt 425  Q
    ||||||||||||||||||    |||||||||||||||||        ||||||||||||||||||||||||||||||||||| | ||||||| |||||||    
T  45094050 ttatgttatgtgcactccctaataaaagtttgagctgta-tttttttatacacattttccatgaaaaattctactccctccg-tccctcaat-gatgatt 45093954  T
Q  426 tatttgac-aaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataatcatgtaagatattgttgga 517  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  45093953 tatttgacaaaaaaacaatattgacttaacatattttgatcatatttttctactaattcacaacgataaataatcatgtaagatattattgga 45093861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 426 - 517
Target Start/End: Complemental strand, 36665251 - 36665158
Alignment:
Q  426 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat--catgtaagatattgttgga 517  Q
    |||||||||| | ||| |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  36665251 tatttgacaatatacattattaacttaacatactttgactatatttttctactaattcacaaagataaataataccatgtaagatattgttgga 36665158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 32285207 - 32285297
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  32285207 ttgacaatatacattattgacttgacatactttgatcatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 32285297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 397 - 517
Target Start/End: Original strand, 32951136 - 32951257
Alignment:
Q  397 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 496  Q
    ||||||||||||  |||||||  ||||| || ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  32951136 tactccctccgtc-cctcaataaatgatctagttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaata 32951234  T
Q  497 --atcatgtaagatattgttgga 517  Q
      ||||| |||||| ||||||||    
T  32951235 atatcatataagatgttgttgga 32951257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 413 - 517
Target Start/End: Original strand, 35717870 - 35717976
Alignment:
Q  413 tcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatat 510  Q
    ||||| |||||  |||||||||| | ||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||  || ||||||||| |    
T  35717870 tcaatagatgacgtatttgacaatatacattattgacttaacatattttgaccatatttttctactaattcacaaagataaataatattatgtaagatgt 35717969  T
Q  511 tgttgga 517  Q
    |||||||    
T  35717970 tgttgga 35717976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 426 - 517
Target Start/End: Original strand, 7671341 - 7671434
Alignment:
Q  426 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||||||||||||||||||||||||||  |||||  ||||||||||| ||| |||||||||||||||  |||||||||||| ||||||||    
T  7671341 tatttgacaaaaaacaatattgacttaacatgttttgacaatatttttctattaactcacaaagataaataatatcatgtaagatgttgttgga 7671434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 51062606 - 51062530
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  51062606 tattgacttgacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 51062530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 17053094 - 17053004
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| |||||| |||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  17053094 ttgacaatatacattattgatttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 17053004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 443 - 514
Target Start/End: Complemental strand, 49058072 - 49057999
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgtt 514  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  49058072 tattgacttgacgtactttgatcatatttttctactaattcacaaagataaataatatcatgtaagatgttgtt 49057999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 37833116 - 37833040
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  37833116 tattgacttgatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 37833040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 498
Target Start/End: Complemental strand, 53066631 - 53066531
Alignment:
Q  397 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 496  Q
    ||||||||||||  ||| ||| |||||| || ||||||| | | | ||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  53066631 tactccctccgtc-ccttaatagatgatctagttgacaatatatattattgacttgacatactttgatcatacttttctactaattcacaaagataaata 53066533  T
Q  497 at 498  Q
    ||    
T  53066532 at 53066531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 21907226 - 21907136
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  21907226 ttgacaatatacattattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 21907136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 38492281 - 38492191
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| |||||| |||||||||||||| |||||||||||||||||| |||||||||||||  ||||||||| || ||||||||    
T  38492281 ttgacaatatacattattgatttaacatactttgaccatatttttctactaatttacaaagataaataatatcatgtaaaatgttgttgga 38492191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 38833893 - 38833803
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||| ||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  38833893 ttgacaatatacattattgacttgacatattttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 38833803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 498
Target Start/End: Original strand, 4238494 - 4238594
Alignment:
Q  397 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 496  Q
    ||||||||||||  |||||||  |||| ||| ||||||| | ||| |||| |||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  4238494 tactccctccgtc-cctcaataaatgacttagttgacaatatacattattaacttaatatactttgaccatatttttccactaattcacaaagataaata 4238592  T
Q  497 at 498  Q
    ||    
T  4238593 at 4238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 7459865 - 7459941
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  7459865 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 7459941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 43138067 - 43137991
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  43138067 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 43137991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 517
Target Start/End: Original strand, 29728120 - 29728219
Alignment:
Q  420 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||| || ||||||| | ||| ||||||||| | ||| ||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  29728120 atgatctagttgacaatatacattattgacttgagatattttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 29728219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 508
Target Start/End: Original strand, 48706891 - 48706958
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  48706891 tattgacttgacatattttgatcatacttttctactaattcacaaagataaataatatcatgtaagat 48706958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 10571175 - 10571265
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||  |||| ||||||| ||||||||    
T  10571175 ttgacaatatacattattgacttgacatactttgaccatatttttatactaatttacaaagataaataatatcaagtaagatgttgttgga 10571265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 445 - 513
Target Start/End: Original strand, 25097234 - 25097304
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgt 513  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||    
T  25097234 ttgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgt 25097304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 443 - 515
Target Start/End: Original strand, 52668531 - 52668605
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttg 515  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||    
T  52668531 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttg 52668605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 54840159 - 54840249
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  54840159 ttgacaatatacattattgacttgacatactttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 54840249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 411 - 517
Target Start/End: Original strand, 3547433 - 3547542
Alignment:
Q  411 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcata-tttttctactaattcacaaagataaata--atcatgtaaga 507  Q
    ||||||| |||||  |||||||||| | ||| ||||||||||||||||||||| |||| ||||| ||||| ||||||| ||||||||  || ||||||||    
T  3547433 cctcaatagatgacctatttgacaatatacattattgacttaacatactttgaccatattttttttactatttcacaatgataaataatataatgtaaga 3547532  T
Q  508 tattgttgga 517  Q
    | ||||||||    
T  3547533 tgttgttgga 3547542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 1327528 - 1327452
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| ||||||||||||| |||||||||||||  |||||||||||| ||||||||    
T  1327528 tattgacttgatatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttgga 1327452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 8559050 - 8559126
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| ||||  ||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  8559050 tattgacttgatatactttgaccatacatttctactaattcacaaagataaataatatcatgtaagatgttgttgga 8559126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 18659268 - 18659192
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| ||||||||||||||| |||||||||||  |||||||||||| ||||||||    
T  18659268 tattgacttgatatactttgaccatacttttctactaattcataaagataaataatatcatgtaagatgttgttgga 18659192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 429 - 498
Target Start/End: Complemental strand, 47638285 - 47638216
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||| | ||| |||||| || ||||||||||| |||| |||||||||||||||||||||||||||||    
T  47638285 ttgacaatatacattattgatttgacatactttgaccatacttttctactaattcacaaagataaataat 47638216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 54673994 - 54673918
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||| || || ||||||||||||||||||||||||||| |||||||||||||  ||||| |||||| ||||||||    
T  54673994 tattgatttgacgtactttgatcatatttttctactaattaacaaagataaataatatcatataagatgttgttgga 54673918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 517
Target Start/End: Complemental strand, 15503270 - 15503163
Alignment:
Q  412 ctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagata 509  Q
    |||||| |||||| || |||| || | ||| ||||||||||| ||||||||||| |||||||||||||||| | ||||| |||||  || |||||||||     
T  15503270 ctcaatagatgatctagttgataatatacattattgacttaatatactttgatcttatttttctactaatttaaaaagaaaaataatattatgtaagatg 15503171  T
Q  510 ttgttgga 517  Q
    ||||||||    
T  15503170 ttgttgga 15503163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 426 - 515
Target Start/End: Complemental strand, 48143996 - 48143905
Alignment:
Q  426 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttg 515  Q
    |||||||||| | | | ||||||| ||| ||| ||||| |||||||||||||||||| |||||||||||||  |||||||||||| ||||||    
T  48143996 tatttgacaatatatattattgacataatatattttgaccatatttttctactaatttacaaagataaataatatcatgtaagatgttgttg 48143905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 45167529 - 45167439
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||| ||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  45167529 ttgacaatatacattattgacttgacatattttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 45167439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 901105 - 901047
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  901105 caattttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 901047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 34669650 - 34669708
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  34669650 caattttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 34669708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 36179153 - 36179095
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||||  ||||||||||||||||||||||||||  |||||||||||||||    
T  36179153 caattttgacttaatttactttgatcatatttttctactaatatacaaagataaataat 36179095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 50673719 - 50673777
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||||| |||||||| |||||||||||||||||  |||||||||||||||    
T  50673719 caattttgacttaacttactttgaccatatttttctactaatatacaaagataaataat 50673777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 460 - 517
Target Start/End: Complemental strand, 10435333 - 10435274
Alignment:
Q  460 ttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||| ||||||||||||||||||||||||||||||||  || ||||||||| ||||||||    
T  10435333 ttgaccatatttttctactaattcacaaagataaataatattatgtaagatgttgttgga 10435274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 508
Target Start/End: Complemental strand, 9145690 - 9145648
Alignment:
Q  466 atatttttctactaattcacaaagataaataatcatgtaagat 508  Q
    |||||||||||||||||||||||||||||||  ||||||||||    
T  9145690 atatttttctactaattcacaaagataaatatacatgtaagat 9145648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 9484638 - 9484696
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  9484638 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 9484696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 12948082 - 12948140
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  12948082 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 12948140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 18013471 - 18013429
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  18013471 tactttgatcatatttttctactaatatacaaagataaataat 18013429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 29455725 - 29455667
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  29455725 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 29455667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 29793395 - 29793337
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  29793395 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 29793337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 34263721 - 34263663
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  34263721 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 34263663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 42098644 - 42098586
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  42098644 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 42098586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 517
Target Start/End: Complemental strand, 46483788 - 46483690
Alignment:
Q  419 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgg 516  Q
    |||||| || ||||||| | ||| |||||| || |||||||  || |||| |||||||||||||||||||||||||||  || ||||||||| |||||||    
T  46483788 gatgatctagttgacaatatacattattgatttgacatact--gaccatacttttctactaattcacaaagataaataatattatgtaagattttgttgg 46483691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 49076443 - 49076385
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  49076443 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 49076385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 53275012 - 53274954
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| || |||||||||||||||||||||||  |||||||||||||||    
T  53275012 caattttgacctaacttattttgatcatatttttctactaatatacaaagataaataat 53274954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 517
Target Start/End: Complemental strand, 3086345 - 3086281
Alignment:
Q  455 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| ||||||||| |||||||  |||||||||||||  ||||| |||||||||||||||    
T  3086345 atactttgaccatatttttttactaatatacaaagataaataatatcatataagatattgttgga 3086281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 34555198 - 34555251
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  34555198 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 34555251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 38833977 - 38833924
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  38833977 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 38833924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 453 - 498
Target Start/End: Complemental strand, 44057587 - 44057542
Alignment:
Q  453 acatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||    
T  44057587 acatactttgatcatgtttttctactaatatacaaagataaataat 44057542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 498
Target Start/End: Original strand, 5030034 - 5030089
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||| ||||||||| | || ||||||||||||  |||||||||||||||    
T  5030034 tattgacttaatatactttgaccgtacttttctactaatatacaaagataaataat 5030089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Complemental strand, 23631598 - 23631551
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||||| | |||||||||||||||  |||||||||||||||    
T  23631598 taacatactttgaccgtatttttctactaatatacaaagataaataat 23631551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Complemental strand, 48927808 - 48927761
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  48927808 taacttactttgaccatatttttctactaatatacaaagataaataat 48927761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 1778403 - 1778461
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||| | |||||||| |||||||||||||||||  ||| |||||||||||    
T  1778403 caattttgacttagcttactttgaccatatttttctactaatatacatagataaataat 1778461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 4464939 - 4464981
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||||||||||||||||||  ||| |||||||||||    
T  4464939 tactttgatcatatttttctactaatgtacatagataaataat 4464981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 4945868 - 4945810
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  ||| |||||||||||    
T  4945868 caattttgacctaacttactttgaccatatttttctactaatatacatagataaataat 4945810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 481
Target Start/End: Complemental strand, 30080745 - 30080715
Alignment:
Q  451 taacatactttgatcatatttttctactaat 481  Q
    |||||||||||||||||||||||||||||||    
T  30080745 taacatactttgatcatatttttctactaat 30080715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 32961288 - 32961346
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| || ||||| |||||||||||||||||  |||||||||||||||    
T  32961288 caattttgacctaacttagtttgaccatatttttctactaatatacaaagataaataat 32961346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 35135764 - 35135818
Alignment:
Q  444 attgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||| | ||||||||||| ||| |||||||||||||  |||||||||||||||    
T  35135764 attgacctgacatactttgaccatgtttttctactaatatacaaagataaataat 35135818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 43370333 - 43370391
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||||| ||||||| |||||||  |||||||||||||||    
T  43370333 caattttgacataacttactttgatcgtatttttatactaatatacaaagataaataat 43370391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 47340085 - 47340043
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||||||||||||||||||  | |||||||||||||    
T  47340085 tactttgatcatatttttctactaatatataaagataaataat 47340043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 496
Target Start/End: Original strand, 21271897 - 21271950
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata 496  Q
    ||||||||||||||||||||||| |||| || |||||||  || ||||||||||    
T  21271897 tattgacttaacatactttgatcgtattgttatactaatatacgaagataaata 21271950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 26759526 - 26759579
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| |||||||| |||||||||||||||||  ||| |||||||||||    
T  26759526 ttgacctaacttactttgaccatatttttctactaatatacatagataaataat 26759579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 490
Target Start/End: Complemental strand, 39557595 - 39557546
Alignment:
Q  441 aatattgacttaacatactttgatcatatttttctactaattcacaaaga 490  Q
    |||||| || |||||||||| || ||||||||||||||||| ||||||||    
T  39557595 aatattcacataacatacttagaccatatttttctactaatgcacaaaga 39557546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 48690269 - 48690193
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| ||||| ||| |  ||||||||||||||||  |||||||||||||  ||||| |||||| ||||||||    
T  48690269 tattgacttgacatattttaacaatatttttctactaatatacaaagataaataatatcatataagatgttgttgga 48690193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 495
Target Start/End: Original strand, 1778216 - 1778268
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaat 495  Q
    |||||| |||| ||||||||||||||||||||||| |||  | ||||||||||    
T  1778216 tattgatttaatatactttgatcatatttttctacaaatatataaagataaat 1778268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 460 - 517
Target Start/End: Complemental strand, 27849150 - 27849091
Alignment:
Q  460 ttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||| |||| ||||||| ||||| |||||||||||||  |||||||||||| ||||||||    
T  27849150 ttgaccatacttttctattaattaacaaagataaataatatcatgtaagatgttgttgga 27849091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 28690707 - 28690656
Alignment:
Q  465 catatttttctactaattcacaaagataaataatcatgtaagatattgttgga 517  Q
    |||||||||||||||||| |||||||||||| |||  ||||||| ||||||||    
T  28690707 catatttttctactaatttacaaagataaat-atctcgtaagatgttgttgga 28690656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 495
Target Start/End: Complemental strand, 30681983 - 30681939
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaat 495  Q
    |||||||| ||||||||||||||||| ||||  ||||||||||||    
T  30681983 taacataccttgatcatatttttctaataatatacaaagataaat 30681939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 498
Target Start/End: Complemental strand, 54684679 - 54684627
Alignment:
Q  446 tgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||||| ||||| | |||||||||||||||  |||||||||||||||    
T  54684679 tgactaaacatattttgaccgtatttttctactaatatacaaagataaataat 54684627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 9e-28; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 397 - 517
Target Start/End: Original strand, 43925074 - 43925195
Alignment:
Q  397 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 496  Q
    ||||||||||||  ||||||| || ||  ||||||| || | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43925074 tactccctccgtc-cctcaatagacgacctatttgataatatacattattgacttaacatactttgatcatatttttctactaattcacaaagataaata 43925172  T
Q  497 --atcatgtaagatattgttgga 517  Q
      |||||||||||| ||||||||    
T  43925173 atatcatgtaagatgttgttgga 43925195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 419 - 517
Target Start/End: Complemental strand, 7106518 - 7106418
Alignment:
Q  419 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgg 516  Q
    |||||| | ||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||  ||||||||| || |||||||    
T  7106518 gatgatctctttgacaaaaaacaatattgagttaacatactctaatcatatttttctactaattcacaaagataaataatatcatgtaaaatgttgttgg 7106419  T
Q  517 a 517  Q
    |    
T  7106418 a 7106418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 419 - 517
Target Start/End: Complemental strand, 4083447 - 4083347
Alignment:
Q  419 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgg 516  Q
    |||||| |||||||||| | ||| ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||  ||||||||| ||||||||||    
T  4083447 gatgatctatttgacaatatacattattgacttgacatactttgaccatatttttctactaaatcacaaagataaataatatcatgtaaaatattgttgg 4083348  T
Q  517 a 517  Q
    |    
T  4083347 a 4083347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 437 - 517
Target Start/End: Complemental strand, 1110514 - 1110432
Alignment:
Q  437 aaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  1110514 aaacattattgatttaacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 1110432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 397 - 517
Target Start/End: Original strand, 39418020 - 39418141
Alignment:
Q  397 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 496  Q
    |||||||||||| || | ||||||||| ||| ||||||| | ||| ||||||||| |||||||||||  | |||||||||||||||||||||||||||||    
T  39418020 tactccctccgtctctt-aatggatgacttagttgacaatatacattattgacttgacatactttgactacatttttctactaattcacaaagataaata 39418118  T
Q  497 --atcatgtaagatattgttgga 517  Q
      |||||||||||| ||||||||    
T  39418119 atatcatgtaagatgttgttgga 39418141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 446 - 517
Target Start/End: Original strand, 38137579 - 38137652
Alignment:
Q  446 tgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  38137579 tgacttaacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 38137652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 426 - 508
Target Start/End: Complemental strand, 332507 - 332423
Alignment:
Q  426 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    |||||||||| | ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||||    
T  332507 tatttgacaatatacattattgacttaacatactttgattatatttttttactaattcacaaagataaataatatcatgtaagat 332423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 38963735 - 38963659
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  38963735 tattgacttgacgtactttgatcatatttttctactaattcacaaagataaataatattatgtaagatattgttgga 38963659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 397 - 517
Target Start/End: Complemental strand, 20517679 - 20517558
Alignment:
Q  397 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 496  Q
    ||||||||||||| ||| |||  |||| ||| ||||||| |  || ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  20517679 tactccctccgtt-ccttaataaatgacttagttgacaatatgcattattgacttgatatactttgaccatatttttctactaattcacaaagataaata 20517581  T
Q  497 --atcatgtaagatattgttgga 517  Q
      |||||||||||| ||||||||    
T  20517580 atatcatgtaagatgttgttgga 20517558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 411 - 517
Target Start/End: Original strand, 13399118 - 13399226
Alignment:
Q  411 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    ||||||| |||||| || ||||||| | ||| |||||||||||||| |||| | |||||||||||||||||| |||||||||||||  |||||||||| |    
T  13399118 cctcaatagatgatctagttgacaatatacattattgacttaacattctttaaccatatttttctactaatttacaaagataaataatatcatgtaagct 13399217  T
Q  509 attgttgga 517  Q
     ||||||||    
T  13399218 gttgttgga 13399226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 18718455 - 18718379
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | |||||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  18718455 tattgacttgatatactttgatcatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 18718379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 420 - 517
Target Start/End: Complemental strand, 42038762 - 42038663
Alignment:
Q  420 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||| | ||||||| | ||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||  ||||| |||||| ||||||||    
T  42038762 atgattcagttgacaatatacattattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatataagatgttgttgga 42038663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 9877114 - 9877204
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||  ||||| |||||| ||||||||    
T  9877114 ttgacaatatacattattgacttgacatactttgaccatatttttttactaattcacaaagataaataatatcatataagatgttgttgga 9877204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 455 - 517
Target Start/End: Original strand, 3987289 - 3987353
Alignment:
Q  455 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  3987289 atactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 3987353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 44283324 - 44283400
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  44283324 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 44283400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 517
Target Start/End: Original strand, 7442913 - 7443012
Alignment:
Q  420 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||| || ||||||| | ||| ||||||||| ||||||||||| |||| ||||||||||||| ||||||||||| |  |||||||||||| ||||||||    
T  7442913 atgatctagttgacaatatacattattgacttgacatactttgaccatacttttctactaatttacaaagataaaaaatatcatgtaagatgttgttgga 7443012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 517
Target Start/End: Original strand, 42020203 - 42020325
Alignment:
Q  397 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatacttt-gatcatatttttctactaattcacaaagataaat 495  Q
    ||||||||||||  ||||||| ||| |  |||||||||| | ||| |||||| |||||||||||| || |||||| ||||||||||||||||| ||||||    
T  42020203 tactccctccgtc-cctcaatagataacctatttgacaatatacattattgatttaacatactttagaccatattattctactaattcacaaatataaat 42020301  T
Q  496 a--atcatgtaagatattgttgga 517  Q
    |  |||||||||||| ||||||||    
T  42020302 aatatcatgtaagatgttgttgga 42020325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 30708958 - 30708868
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| | ||| ||||| |||||||||||||||||| |||||||||||||  |||||||||||| ||||||||    
T  30708958 ttgacaatatacattattgacttgatatattttgaccatatttttctactaatttacaaagataaataatatcatgtaagatgttgttgga 30708868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 40598359 - 40598269
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| |||| | |||| ||||||||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||    
T  40598359 ttgacaatatacattattaatttaatatactttgaccatatttttctaataattcacaaagataaataatatcatgtaagatgttgttgga 40598269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 14372293 - 14372217
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat--catgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| ||||||||||||||||||| |||||||||  |||||||||| ||||||||    
T  14372293 tattgacttgatatactttgaccatacttttctactaattcacaaatataaataataacatgtaagatgttgttgga 14372217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 16941856 - 16941932
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | |||||||||||||| |||||||||||||||||||||| ||||  || ||||||||| ||||||||    
T  16941856 tattgacttgatatactttgatcatacttttctactaattcacaaagatgaataatattatgtaagatgttgttgga 16941932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 17012521 - 17012597
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | |||||||||||||| |||||||||||||||||||||| ||||  || ||||||||| ||||||||    
T  17012521 tattgacttgatatactttgatcatacttttctactaattcacaaagatgaataatattatgtaagatgttgttgga 17012597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 411 - 517
Target Start/End: Original strand, 24282973 - 24283081
Alignment:
Q  411 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    ||||||| |||||| || ||||||| | | | |||||| || ||||| |||||  |||||||| ||||||||||||||||||||||  ||||||||||||    
T  24282973 cctcaatagatgatctagttgacaatatatattattgatttgacatattttgactatatttttttactaattcacaaagataaataatatcatgtaagat 24283072  T
Q  509 attgttgga 517  Q
     ||||||||    
T  24283073 gttgttgga 24283081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 429 - 498
Target Start/End: Original strand, 32775934 - 32776003
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||| | ||| ||||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||    
T  32775934 ttgacaatatacattattgacttgacatactttgaccatatttttctactaattcactaagaaaaataat 32776003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 34827128 - 34827052
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| ||||||||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  34827128 tattgacttgacatactttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 34827052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 41172802 - 41172878
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaat--aatcatgtaagatattgttgga 517  Q
    ||||||||| | |||||||||||||| ||||||| ||||||||||||||||||   |||||||||||| ||||||||    
T  41172802 tattgacttgatatactttgatcatacttttctattaattcacaaagataaatgatatcatgtaagatgttgttgga 41172878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 517
Target Start/End: Original strand, 41463539 - 41463638
Alignment:
Q  420 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||| || ||||||| | ||| |||||| || ||||||||| | || ||||||||||||||| |||||||||||||  |||||||||||| ||||||||    
T  41463539 atgatctagttgacaatatacattattgatttgacatactttcaccacatttttctactaatttacaaagataaataatatcatgtaagatgttgttgga 41463638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 445 - 517
Target Start/End: Complemental strand, 27559789 - 27559715
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| ||||||||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  27559789 ttgacttgacatactttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 27559715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 44330614 - 44330524
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||| | || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  44330614 ttgacaatatacattattgacttgacatactttaaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 44330524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 14707580 - 14707655
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| |  |||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  14707580 tattgacttgatgtactttga-catacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 14707655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 517
Target Start/End: Complemental strand, 23671580 - 23671516
Alignment:
Q  455 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| |||| |||||||||||||||||||||||||||  ||||| |||||| ||||||||    
T  23671580 atactttgaccatacttttctactaattcacaaagataaataatatcatataagatgttgttgga 23671516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 517
Target Start/End: Original strand, 36199008 - 36199072
Alignment:
Q  455 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | || |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  36199008 atactttgaccgtacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 36199072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 517
Target Start/End: Original strand, 40425306 - 40425370
Alignment:
Q  455 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| |||| |||||||||||||| ||||||||||||  |||||||||||| ||||||||    
T  40425306 atactttgaccatacttttctactaattcgcaaagataaataatatcatgtaagatgttgttgga 40425370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 7724632 - 7724574
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  7724632 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 7724574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 8373476 - 8373534
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  8373476 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 8373534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 8896313 - 8896371
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  8896313 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 8896371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 12209031 - 12209089
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  12209031 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 12209089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 38963837 - 38963895
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  38963837 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 38963895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 40471778 - 40471836
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||||| || ||||||||||||||| |||||||  |||||||||||||||    
T  40471778 caattttgacttaacttattttgatcatatttttttactaatatacaaagataaataat 40471836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 427 - 517
Target Start/End: Original strand, 4045262 - 4045354
Alignment:
Q  427 atttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||| | ||||||| ||||| ||||| || |||||| |||||||| |||||||||||||  ||||||||| || ||||||||    
T  4045262 atttgacaatatacattgttgacttgacatattttgaccacatttttatactaatttacaaagataaataatatcatgtaaaatgttgttgga 4045354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 16127796 - 16127743
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| ||||||||||||||||||| ||||||  |||||||||||||||    
T  16127796 ttgacctaacttactttgatcatatttttccactaatatacaaagataaataat 16127743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 443 - 492
Target Start/End: Original strand, 30776245 - 30776294
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagata 492  Q
    ||||||||| |||||||||||  ||||||||||||||||| |||||||||    
T  30776245 tattgacttgacatactttgacaatatttttctactaatttacaaagata 30776294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 41436879 - 41436932
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  41436879 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 41436932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 514
Target Start/End: Original strand, 18733968 - 18734043
Alignment:
Q  441 aatattgacttaacatactttgatcatatttttctactaattcacaaagataaataa--tcatgtaagatattgtt 514  Q
    ||||||||||||||||| ||||||  |||||||||||||||  || |||||||| ||  ||||||||||| |||||    
T  18733968 aatattgacttaacatattttgattgtatttttctactaatatacgaagataaaaaatttcatgtaagatgttgtt 18734043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 498
Target Start/End: Complemental strand, 3037929 - 3037874
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||| ||||||| |||||||| |||||| |||||||  |||||||||||||||    
T  3037929 tattgacctaacatattttgatcacatttttttactaatatacaaagataaataat 3037874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 498
Target Start/End: Original strand, 4137470 - 4137509
Alignment:
Q  459 tttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  4137470 tttgatcatatttttctactaatatacaaagataaataat 4137509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 498
Target Start/End: Original strand, 5096289 - 5096348
Alignment:
Q  439 acaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| ||||| |||| || |||||||||||||||||||||||  | |||||||||||||    
T  5096289 acaattttgacataacttattttgatcatatttttctactaatatataaagataaataat 5096348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 498
Target Start/End: Complemental strand, 42951599 - 42951545
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||| ||||||||||||||  |||||||| ||||||||||||| ||||||||||    
T  42951599 tattgatttaacatactttgacaatattttt-tactaattcacaacgataaataat 42951545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Complemental strand, 43328811 - 43328764
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  43328811 taacttactttgaccatatttttctactaatatacaaagataaataat 43328764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 508
Target Start/End: Original strand, 2831754 - 2831819
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    ||||| |||| |||||||| |||||||||||||||||  ||||| |||||||  ||||||||||||    
T  2831754 ttgacctaacttactttgaccatatttttctactaatatacaaatataaataatatcatgtaagat 2831819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 517
Target Start/End: Complemental strand, 4046055 - 4045990
Alignment:
Q  453 acatactttgatcatatttttctactaattcacaaagataaata---atcatgtaagatattgttgga 517  Q
    ||||||||||  |||| ||||||||||||||||||||||||| |   |||||||||||| ||||||||    
T  4046055 acatactttg--catacttttctactaattcacaaagataaaaatatatcatgtaagatgttgttgga 4045990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 6075167 - 6075225
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||| ||||| |||||||| |||||||||||| ||||  |||||||||||||||    
T  6075167 caattttgatttaacttactttgaccatatttttctattaatatacaaagataaataat 6075225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 16126103 - 16126045
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||| ||||||  |||||||||||||||    
T  16126103 caattttgacctaacttactttgaccatatttttccactaatatacaaagataaataat 16126045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 37987941 - 37987899
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||||||||||||| |||||||  |||||||||||||||    
T  37987941 tactttgatcatatttttttactaatatacaaagataaataat 37987899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 498
Target Start/End: Original strand, 5030339 - 5030384
Alignment:
Q  453 acatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||||| ||||||| |||||||  |||||||||||||||    
T  5030339 acatactttgatcgtatttttatactaatatacaaagataaataat 5030384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 10333594 - 10333541
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| || ||||| |||||||||||||||||  |||||||||||||||    
T  10333594 ttgacctaacttattttgaccatatttttctactaatatacaaagataaataat 10333541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 481
Target Start/End: Original strand, 11277593 - 11277634
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaat 481  Q
    |||| ||||| |||| ||||||||||||||||||||||||||    
T  11277593 caattttgacataacttactttgatcatatttttctactaat 11277634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 27668005 - 27668058
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||| ||||||||||| |||||||||||| ||||   ||||||||||||||    
T  27668005 ttgacttgacatactttgaccatatttttctagtaatatgcaaagataaataat 27668058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 32776221 - 32776168
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||| |||||||||   |||||||||||||||||  |||||||||||||||    
T  32776221 ttgactttacatactttagccatatttttctactaatatacaaagataaataat 32776168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 498
Target Start/End: Complemental strand, 33046256 - 33046199
Alignment:
Q  441 aatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||| || || |||| |||||| ||||||||||||||||  |||||||||||||||    
T  33046256 aatattaacctagcatattttgattatatttttctactaatatacaaagataaataat 33046199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 517
Target Start/End: Complemental strand, 43409489 - 43409425
Alignment:
Q  455 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| |||||||||||| ||||  |||||||||||||  |||||  ||||||||||||||    
T  43409489 atactttgaccatatttttctattaatatacaaagataaataatatcataaaagatattgttgga 43409425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 45036410 - 45036463
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||||| |||  ||| |||||||||||||||||  |||||||||||||||    
T  45036410 ttgacttaacttacgctgaccatatttttctactaatatacaaagataaataat 45036463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 459 - 508
Target Start/End: Complemental strand, 11384047 - 11383996
Alignment:
Q  459 tttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    |||||||||||||||||||||||  | |||||||||||  ||||||||||||    
T  11384047 tttgatcatatttttctactaatatataaagataaataatatcatgtaagat 11383996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 498
Target Start/End: Original strand, 15177421 - 15177469
Alignment:
Q  450 ttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||||||| ||||||||| |||||||  |||||||||||||||    
T  15177421 ttaacttactttgaccatatttttatactaatatacaaagataaataat 15177469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 495
Target Start/End: Original strand, 41491995 - 41492039
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaat 495  Q
    ||||||| |||||| ||||||||||||||| | ||||||||||||    
T  41491995 taacatattttgatgatatttttctactaagttacaaagataaat 41492039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 411 - 517
Target Start/End: Original strand, 20167590 - 20167698
Alignment:
Q  411 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    ||||||| |||||| |||||||||| | ||| ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||  ||||||||||||    
T  20167590 cctcaatagatgatctatttgacaatatacactattgacttaacatattttgataatatttttctactaattcacaaaaataaataatatcatgtaagat 20167689  T
Q  509 attgttgga 517  Q
     ||||||||    
T  20167690 gttgttgga 20167698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 25256549 - 25256473
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||| ||||||||    
T  25256549 tattgacttaacatactttgatcatatttttctactaatttacaaagataaataatatcatgtaagatgttgttgga 25256473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 31127850 - 31127926
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  31127850 tattgacttaatatactttgatcatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 31127926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 413 - 517
Target Start/End: Complemental strand, 10658223 - 10658117
Alignment:
Q  413 tcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatat 510  Q
    ||||| |||||| |||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||| ||||| |||||||  || ||||||||| |    
T  10658223 tcaatagatgatctatttgacaatatacattattgacttaacatactttgaccatatttttctactaattaacaaatataaataatattatgtaagatgt 10658124  T
Q  511 tgttgga 517  Q
    |||||||    
T  10658123 tgttgga 10658117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 426 - 513
Target Start/End: Original strand, 886097 - 886186
Alignment:
Q  426 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgt 513  Q
    |||||||||| | ||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||    
T  886097 tatttgacaatatacattattaacttaacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgt 886186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 6471075 - 6470985
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| |||||||||||||||| ||||||||||||||| |||||||||||  |||||||||||| ||||||||    
T  6471075 ttgacaatatacattattgacttgacatactttgatcatacttttctactaattcataaagataaataatatcatgtaagatgttgttgga 6470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 18809506 - 18809416
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  ||||| |||||| ||||||||    
T  18809506 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatataagatgttgttgga 18809416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 30380760 - 30380670
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  30380760 ttgacaatatacattattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 30380670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 413 - 508
Target Start/End: Complemental strand, 44123916 - 44123819
Alignment:
Q  413 tcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    ||||| |||||  |||||||||| | ||| | ||||||||||||||||| | ||||||||||||||||||||||||||||||||  ||||||||||||    
T  44123916 tcaatagatgacctatttgacaatatacattgttgacttaacatactttcaccatatttttctactaattcacaaagataaataatatcatgtaagat 44123819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 13138177 - 13138253
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  13138177 tattgacttgacatattttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 13138253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 3293132 - 3293222
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  3293132 ttgacaatatacattattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 3293222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 412 - 508
Target Start/End: Complemental strand, 45253993 - 45253895
Alignment:
Q  412 ctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    |||||| |||||  || ||||||| | ||| ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||  ||||||||||||    
T  45253993 ctcaatagatgacctagttgacaatatacattattgacttgacatactttgaccatatttttctactaattcacaaagaaaaataatatcatgtaagat 45253895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 14847425 - 14847349
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||  || || |||||||||||||||    
T  14847425 tattaactttacatactttgaccatatttttctactaattcacaaagataaataatattatttaagatattgttgga 14847349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 23249068 - 23248992
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  23249068 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 23248992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 29791158 - 29791082
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  29791158 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 29791082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 30290140 - 30290064
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  30290140 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 30290064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 43066342 - 43066266
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  43066342 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 43066266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 419 - 498
Target Start/End: Complemental strand, 3383648 - 3383569
Alignment:
Q  419 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||| |||||||||| | | | ||||||||||| ||||| |||||||||||||  |||||||||||||||||||||||    
T  3383648 gatgatatatttgacaatatatattattgacttaatatactgtgatcatattttttcactaattcacaaagataaataat 3383569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 8350911 - 8351001
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||||||||||| ||||| | |||||||||||  |||||||||||| ||||||||    
T  8350911 ttgacaatatacattattgacttgacatactttgaccatatttttctattaatttagaaagataaataatatcatgtaagatgttgttgga 8351001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 37710129 - 37710039
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  37710129 ttgacaatatacattattgacttgacatactttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 37710039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 445 - 517
Target Start/End: Complemental strand, 38845821 - 38845747
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| ||||||||||| || |||||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  38845821 ttgacttgacatactttgaccacatttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 38845747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 1580810 - 1580886
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||| || ||||||||||| |||| ||||||||||||| |||||||||||||  |||||||||||| ||||||||    
T  1580810 tattgagttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttgga 1580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 426 - 508
Target Start/End: Complemental strand, 12893761 - 12893677
Alignment:
Q  426 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    |||||||||| |  || ||||||||||||||||||||| ||||||||||||  |||| |||||||||||||  ||||||||||||    
T  12893761 tatttgacaatatgcattattgacttaacatactttgaccatatttttctatcaatttacaaagataaataatatcatgtaagat 12893677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 444 - 517
Target Start/End: Original strand, 2805522 - 2805597
Alignment:
Q  444 attgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||| | ||||||||| |||| ||||||||||||||||||||| |||||  |||||||||||| ||||||||    
T  2805522 attgacttgatatactttgaccatacttttctactaattcacaaagaaaaataatatcatgtaagatgttgttgga 2805597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 517
Target Start/End: Complemental strand, 2986564 - 2986465
Alignment:
Q  420 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||| ||| ||||||| | ||| ||||||||| ||||| ||||| |||| ||||||||||||| |||||||| ||||  |||||||||||| ||||||||    
T  2986564 atgacttagttgacaatatacattattgacttgacatattttgaccatacttttctactaatttacaaagattaataatatcatgtaagatgttgttgga 2986465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 40645651 - 40645709
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  40645651 caattttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 40645709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 38739873 - 38739797
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||| || ||||||||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  38739873 tattgatttgacatactttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 38739797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 38842210 - 38842263
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  38842210 ttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 38842263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 517
Target Start/End: Complemental strand, 39361329 - 39361265
Alignment:
Q  455 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||||||||| ||||||| |||||||||||||||||||  ||||| |||||| ||||||||    
T  39361329 atactttgatcatacttttctattaattcacaaagataaataatatcatataagatgttgttgga 39361265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 429 - 515
Target Start/End: Complemental strand, 40013881 - 40013793
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttg 515  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| || ||||||||||| |||||||  |||||||||||| ||||||    
T  40013881 ttgacaatatacattattgacttgacatactttgaccatacttttatattaattcacaaatataaataatatcatgtaagatgttgttg 40013793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 517
Target Start/End: Complemental strand, 45082016 - 45081952
Alignment:
Q  455 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||| || |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  45082016 atacttcgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 45081952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 448 - 517
Target Start/End: Complemental strand, 11854736 - 11854665
Alignment:
Q  448 acttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||| |||| || | ||||||||||||||||||||||||||||||||  ||| |||||||| ||||||||    
T  11854736 acttaatataccttaaccatatttttctactaattcacaaagataaataatatcctgtaagatgttgttgga 11854665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 514
Target Start/End: Original strand, 20671303 - 20671374
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgtt 514  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||  ||||| ||||||||||||    
T  20671303 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatattgtt 20671374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 451 - 498
Target Start/End: Complemental strand, 4327127 - 4327080
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  4327127 taacttactttgatcatatttttctactaatatacaaagataaataat 4327080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 498
Target Start/End: Complemental strand, 13888646 - 13888591
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||| |||||||||||||| | |||||||||||||||  |||||||||||||||    
T  13888646 tattgatttaacatactttgaccgtatttttctactaatatacaaagataaataat 13888591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 14522609 - 14522520
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| | ||||||||| |||| ||||||||||||| ||||||||||| |  |||||||||||| ||||||||    
T  14522609 ttgacaatatacattattgacttgatatactttgaccatacttttctactaatt-acaaagataaaaaatatcatgtaagatgttgttgga 14522520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 515
Target Start/End: Original strand, 23764510 - 23764568
Alignment:
Q  459 tttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttg 515  Q
    |||||||||||||||||| ||||||||||||| |||||  |||||||||||| ||||||    
T  23764510 tttgatcatatttttctattaattcacaaagaaaaataatatcatgtaagatgttgttg 23764568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 21132947 - 21132889
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||||| |||||||| |||||||||||||||||  ||||||| |||||||    
T  21132947 caattttgacttaacttactttgaccatatttttctactaatatacaaagaaaaataat 21132889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 25691616 - 25691558
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  25691616 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 25691558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 30464474 - 30464532
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  30464474 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 30464532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 514
Target Start/End: Complemental strand, 35584190 - 35584117
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgtt 514  Q
    ||||||| ||| ||| |||||||||||||||||| ||||  |||||||||||||  ||||| ||||||||||||    
T  35584190 tattgacctaatatattttgatcatatttttctattaatatacaaagataaataatatcatataagatattgtt 35584117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 514
Target Start/End: Complemental strand, 29917942 - 29917871
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgtt 514  Q
    ||||| |||| || ||||| |||||||||||||||||  |||||||||||||  ||||| ||||||||||||    
T  29917942 ttgacctaacttattttgaccatatttttctactaatatacaaagataaataatatcatataagatattgtt 29917871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 6470645 - 6470735
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| |||||| || | ||| |||||  ||| ||||||||||||||| |||||||||||  |||||||||||| ||||||||    
T  6470645 ttgacaatatacattattgatttgagatattttgacgatacttttctactaattcataaagataaataatatcatgtaagatgttgttgga 6470735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Original strand, 17523858 - 17523905
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||||||||||||||| |||||  |||||||||||||||    
T  17523858 taacttactttgatcatatttttctgctaatatacaaagataaataat 17523905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Original strand, 23547121 - 23547168
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||||||| ||||||||||||||||  |||||||||||||||    
T  23547121 taacttactttgataatatttttctactaatatacaaagataaataat 23547168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Complemental strand, 29616334 - 29616287
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||||||||||| |||||||||  |||||||||||||||    
T  29616334 taacttactttgatcatatttgtctactaatatacaaagataaataat 29616287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Original strand, 30653413 - 30653460
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  30653413 taacttactttgaccatatttttctactaatatacaaagataaataat 30653460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 498
Target Start/End: Original strand, 44039886 - 44039925
Alignment:
Q  459 tttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  44039886 tttgatcatatttttctactaatatacaaagataaataat 44039925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 3466325 - 3466383
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||||  |||||||||||||||  |||||||||||||||    
T  3466325 caattttgacctaacttactttgattttatttttctactaatatacaaagataaataat 3466383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 8496905 - 8496847
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| ||||||||||||| |||  |||||||||||||||    
T  8496905 caattttgacctaacttactttgaccatatttttctacgaatatacaaagataaataat 8496847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 9302399 - 9302453
Alignment:
Q  445 ttgacttaacatactttgatcatat-ttttctactaattcacaaagataaataat 498  Q
    |||||||||||||  |||||||||| ||||||| ||||| |||||||||||||||    
T  9302399 ttgacttaacatatattgatcatatattttctattaatttacaaagataaataat 9302453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 15870233 - 15870275
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||||||||||||||||||  ||||| |||||||||    
T  15870233 tactttgatcatatttttctactaatatacaaaaataaataat 15870275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 25009202 - 25009244
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  25009202 tactttgaccatatttttctactaatatacaaagataaataat 25009244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 43184793 - 43184740
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| |||||||| |||||||||||||||||  ||||| |||||||||    
T  43184793 ttgacctaacttactttgaccatatttttctactaatatacaaaaataaataat 43184740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 495
Target Start/End: Complemental strand, 11335434 - 11335390
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaat 495  Q
    ||||||||||||| |||||||||||||||||  ||||||| ||||    
T  11335434 taacatactttgaccatatttttctactaatatacaaagacaaat 11335390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 458 - 498
Target Start/End: Complemental strand, 23437814 - 23437774
Alignment:
Q  458 ctttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||| |||||||||||||||||  |||||||||||||||    
T  23437814 ctttgaccatatttttctactaatatacaaagataaataat 23437774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 411 - 517
Target Start/End: Original strand, 44389299 - 44389407
Alignment:
Q  411 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    ||||||| |||||| |||||||||| | ||| ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||  ||||||||||||    
T  44389299 cctcaatagatgatctatttgacaatatacactattgacttaacatattttgataatatttttctactaattcacaaaaataaataatatcatgtaagat 44389398  T
Q  509 attgttgga 517  Q
     ||||||||    
T  44389399 gttgttgga 44389407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 412 - 517
Target Start/End: Original strand, 18795154 - 18795261
Alignment:
Q  412 ctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagata 509  Q
    |||||| ||| | ||||||||||| | | | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||     
T  18795154 ctcaatagatcacttatttgacaatatatattattgacttaacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatg 18795253  T
Q  510 ttgttgga 517  Q
    ||||||||    
T  18795254 ttgttgga 18795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 37231594 - 37231684
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  37231594 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 37231684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 47713533 - 47713623
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  47713533 ttgacaatatacattattgacttgacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 47713623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 48531552 - 48531462
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  48531552 ttgacaatatacattattgacttgacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 48531462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 44479752 - 44479842
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  44479752 ttgacaatatacattattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 44479842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 421 - 517
Target Start/End: Complemental strand, 46657871 - 46657773
Alignment:
Q  421 tgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||| |||||||||| | ||| |||||||||||||| |||||| |||||||||||| ||||| |||||||||||||  |||||||||||| ||||||||    
T  46657871 tgatctatttgacaacatacattattgacttaacattctttgaccatatttttctattaatttacaaagataaataatatcatgtaagatgttgttgga 46657773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 32618987 - 32619063
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | |||||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  32618987 tattgactttatatactttgatcatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 32619063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 429 - 498
Target Start/End: Original strand, 34478039 - 34478108
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||| | ||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34478039 ttgacaatatacattattgatttaacatactttgaccatatttttctactaattcacaaagataaataat 34478108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 36819912 - 36819836
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  36819912 tattgacttgatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 36819836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 429 - 514
Target Start/End: Complemental strand, 21392248 - 21392161
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgtt 514  Q
    ||||||| | ||| |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  21392248 ttgacaatatacattattaacttgacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgtt 21392161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 411 - 517
Target Start/End: Original strand, 31497722 - 31497825
Alignment:
Q  411 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataatcatgtaagatat 510  Q
    |||||||  |||| ||||||||||| | ||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||||    |||||||||||| |    
T  31497722 cctcaatacatgacttatttgacaatatacattattgacttaatataatttgaccatatttttctactaattcacaaagata---tatcatgtaagatgt 31497818  T
Q  511 tgttgga 517  Q
    |||||||    
T  31497819 tgttgga 31497825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 10464146 - 10464236
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||| ||||||||| |||||||||||||||||||| |||||||||||  ||||| |||||| ||||||||    
T  10464146 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcataaagataaataatatcatataagatgttgttgga 10464236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 31466389 - 31466479
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||  |||||||||||| ||||||||    
T  31466389 ttgacaatatacattattgacttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttgga 31466479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 35500778 - 35500868
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||| |||||||||  ||||||||||||||||||| |||||||||||  |||||||||||| ||||||||    
T  35500778 ttgacaatatacattattgacttaagatactttgactatatttttctactaattcataaagataaataatatcatgtaagatgttgttgga 35500868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 2400501 - 2400425
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  2400501 tattgactttatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 2400425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 455 - 517
Target Start/End: Original strand, 36859265 - 36859329
Alignment:
Q  455 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  36859265 atactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 36859329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 4612118 - 4612208
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  4612118 ttgacaatatacattattgacttgacatactttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 4612208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 23474000 - 23474090
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| ||| ||||||||| |||||||||||||  |||||||||||| ||||||||    
T  23474000 ttgacaatatacattattgactttacatactttgaccatactttcctactaatttacaaagataaataatatcatgtaagatgttgttgga 23474090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 36643392 - 36643302
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| |||||| |||| ||||||||| |||||||||| |||||||||||||||||||||  ||||| |||||| ||||||||    
T  36643392 ttgacaatatacattattgatttaatatactttgaccatatttttccactaattcacaaagataaataatatcatataagatgttgttgga 36643302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 47538153 - 47538063
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||| ||||| |||||| |||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  47538153 ttgacaatatacattatggacttgacataccttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 47538063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 37950990 - 37951066
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||| |||||||||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  37950990 tattgacttgatatattttgatcatacttttttactaattcacaaagataaataatatcatgtaagatgttgttgga 37951066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 42086683 - 42086759
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||| ||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  42086683 tattgacttgatatattttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 42086759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 455 - 517
Target Start/End: Original strand, 42834349 - 42834413
Alignment:
Q  455 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  42834349 atactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 42834413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 47081196 - 47081120
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||| ||||||||||||||  |||||||||||| ||||||||    
T  47081196 tattgacttgatatactttgaccatacttttctactaatccacaaagataaataatatcatgtaagatgttgttgga 47081120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 508
Target Start/End: Original strand, 28185456 - 28185523
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  ||||||||||||    
T  28185456 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagat 28185523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 444 - 517
Target Start/End: Complemental strand, 36905741 - 36905666
Alignment:
Q  444 attgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||| |||||||||||  ||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  36905741 attgacttgacatactttgactatacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 36905666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 498
Target Start/End: Complemental strand, 7314364 - 7314309
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||| ||||||||||||| |||||||||||||||||  |||||||||||||||    
T  7314364 tattgacctaacatactttgaccatatttttctactaatatacaaagataaataat 7314309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 19072999 - 19072909
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| |||||| || ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||| ||||    
T  19072999 ttgacaatatacattattgatttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgctgga 19072909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 508
Target Start/End: Complemental strand, 33613451 - 33613362
Alignment:
Q  420 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    |||||||||||||| | | ||| ||||||||||| ||| ||||| ||||||||| |||||||||||||| |||||||  ||||||||||||    
T  33613451 atgatttatttgaccatatacattattgacttaatata-tttgaccatatttttttactaattcacaaaaataaataatatcatgtaagat 33613362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 42493563 - 42493617
Alignment:
Q  444 attgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||| ||||||||||||| |||||||||||||||||  |||||||||||||||    
T  42493563 attgacctaacatactttgaccatatttttctactaatatacaaagataaataat 42493617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 517
Target Start/End: Complemental strand, 31110840 - 31110765
Alignment:
Q  444 attgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||| | |||||||||  ||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  31110840 attgacttgaaatactttgactatacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 31110765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 441 - 517
Target Start/End: Complemental strand, 27248866 - 27248788
Alignment:
Q  441 aatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||  |||||||||||||||| ||||||||||||||  ||||| |||| ||  ||||| |||||||||||||||    
T  27248866 aatattgaactaacatactttgatcagatttttctactaatatacaaaaataattaatatcatataagatattgttgga 27248788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 16807168 - 16807110
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  16807168 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 16807110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 30462243 - 30462185
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||||| |||||||| ||||||||| |||||||  |||||||||||||||    
T  30462243 caattttgacttaacttactttgaccatatttttttactaatatacaaagataaataat 30462185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 38069093 - 38069151
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  38069093 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 38069151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 9173353 - 9173300
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  9173353 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 9173300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 440 - 497
Target Start/End: Original strand, 23348398 - 23348455
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataa 497  Q
    |||||||||  ||||||||||||| ||||||||| |||||||  ||||||||||||||    
T  23348398 caatattgaactaacatactttgaccatatttttttactaatatacaaagataaataa 23348455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Original strand, 28016168 - 28016215
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  28016168 taacttactttgaccatatttttctactaatatacaaagataaataat 28016215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 478
Target Start/End: Complemental strand, 22127370 - 22127312
Alignment:
Q  420 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctact 478  Q
    ||||| ||||||||||   | ||||||||| |||||||||||||||| |||||||||||    
T  22127370 atgatctatttgacaatgtataatattgacctaacatactttgatcacatttttctact 22127312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 25274039 - 25273981
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||| ||||||||||||  |||||||||||||||    
T  25274039 caattttgacctaacttactttgaccataattttctactaatatacaaagataaataat 25273981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 26651215 - 26651173
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  26651215 tactttgaccatatttttctactaatatacaaagataaataat 26651173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 517
Target Start/End: Original strand, 29770546 - 29770595
Alignment:
Q  470 ttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||||||||||||||||||||||  |||||| ||||| ||||||||    
T  29770546 ttttctactaattcacaaagataaataatatcatggaagatgttgttgga 29770595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 478
Target Start/End: Original strand, 40535551 - 40535609
Alignment:
Q  420 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctact 478  Q
    ||||| ||||||||||   | ||||||||| |||||||||||||||| |||||||||||    
T  40535551 atgatctatttgacaatgtataatattgacctaacatactttgatcacatttttctact 40535609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 38850749 - 38850802
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| |||||||| |||||||||| ||||||  |||||||||||||||    
T  38850749 ttgacctaacttactttgaccatatttttccactaatatacaaagataaataat 38850802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 498
Target Start/End: Complemental strand, 40348613 - 40348568
Alignment:
Q  453 acatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| ||||| |||||||||||||||||  |||||||||||||||    
T  40348613 acatattttgaccatatttttctactaatatacaaagataaataat 40348568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 494
Target Start/End: Complemental strand, 2450895 - 2450851
Alignment:
Q  450 ttaacatactttgatcatatttttctactaattcacaaagataaa 494  Q
    |||||||| ||| | |||||||||||| |||||||||||||||||    
T  2450895 ttaacatattttaaccatatttttctattaattcacaaagataaa 2450851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 498
Target Start/End: Original strand, 23734190 - 23734270
Alignment:
Q  419 gatgatttatttgacaaaaaacaatattgacttaa-catactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||||||||| || |  || ||||||||||| |||| |||||  ||||||||||||||||  || ||||||||||||    
T  23734190 gatgatttatttgaaaatatgcactattgacttaaacatattttgactatatttttctactaatatacgaagataaataat 23734270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 499
Target Start/End: Complemental strand, 40818708 - 40818660
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataatc 499  Q
    |||| |||| ||| |||||||||||||||||  ||||||||||||||||    
T  40818708 taacttactctgaccatatttttctactaatatacaaagataaataatc 40818660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 9e-25; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 412 - 515
Target Start/End: Original strand, 51736968 - 51737073
Alignment:
Q  412 ctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagata 509  Q
    |||||| |||||| |||||||||| | ||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||  ||||||||||||     
T  51736968 ctcaatagatgatctatttgacaatatacattattgacttaatatattttgaccatatttttctactaattcacaaagataaataatatcatgtaagatg 51737067  T
Q  510 ttgttg 515  Q
    ||||||    
T  51737068 ttgttg 51737073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 444 - 517
Target Start/End: Original strand, 19525760 - 19525835
Alignment:
Q  444 attgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  19525760 attgacttaacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 19525835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 413 - 514
Target Start/End: Complemental strand, 50033266 - 50033163
Alignment:
Q  413 tcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatat 510  Q
    ||||| |||||  |||||||| | | ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |    
T  50033266 tcaatagatgacctatttgacgatatacattattgacttaacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgt 50033167  T
Q  511 tgtt 514  Q
    ||||    
T  50033166 tgtt 50033163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 18360004 - 18360094
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  18360004 ttgacaatatacattattgacttgacatactttgattatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 18360094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 25644589 - 25644499
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  25644589 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 25644499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 36602924 - 36602834
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  36602924 ttgacaatatacattattgacttgacatactttgattatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 36602834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 397 - 515
Target Start/End: Original strand, 6922940 - 6923059
Alignment:
Q  397 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 496  Q
    ||||||||||||| |||||||  ||||  || |||| || | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  6922940 tactccctccgtt-cctcaataaatgacctagttgataatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaata 6923038  T
Q  497 --atcatgtaagatattgttg 515  Q
      |||||||||||| ||||||    
T  6923039 atatcatgtaagatgttgttg 6923059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 396 - 517
Target Start/End: Original strand, 23603646 - 23603768
Alignment:
Q  396 ctactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaat 495  Q
    |||||||||||||| ||||||| |||||  || ||||||| | ||| ||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||    
T  23603646 ctactccctccgtt-cctcaatagatgacctagttgacaatatacattattgacttgacatactttgaacatatttttctactaattcaaaaagaaaaat 23603744  T
Q  496 a--atcatgtaagatattgttgga 517  Q
    |  |||||||||| | ||||||||    
T  23603745 aatatcatgtaagttgttgttgga 23603768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 413 - 508
Target Start/End: Complemental strand, 50035782 - 50035685
Alignment:
Q  413 tcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    ||||| |||||  |||||||||| | ||| | ||||||||||||||||| | ||||||||||||||||||||||||||||||||  ||||||||||||    
T  50035782 tcaatagatgacctatttgacaatatacattgttgacttaacatactttcaccatatttttctactaattcacaaagataaataatatcatgtaagat 50035685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 19170584 - 19170660
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| || |||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  19170584 tattgacttgacgtactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 19170660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 28152207 - 28152131
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | |||||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  28152207 tattgacttgatatactttgatcatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 28152131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 28166490 - 28166414
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  28166490 tattgacttgatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 28166414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 429 - 515
Target Start/End: Original strand, 39260163 - 39260251
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttg 515  Q
    ||||||| | ||| ||||||||| ||||||||||||| || |||||||||||||||||||||||||||  |||||||||||| ||||||    
T  39260163 ttgacaatatacattattgacttgacatactttgatcctacttttctactaattcacaaagataaataatatcatgtaagatgttgttg 39260251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 46803848 - 46803772
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  46803848 tattgacttgatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 46803772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 420 - 517
Target Start/End: Complemental strand, 4264373 - 4264274
Alignment:
Q  420 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||| ||| ||||||| | ||| ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  4264373 atgacttagttgacaatatacattattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 4264274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 6494820 - 6494728
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat----catgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||    |||||||||| ||||||||    
T  6494820 ttgacaatatacattattgacttaacatactttgaccatacttttatactaattcacaaagataaataatactacatgtaagatgttgttgga 6494728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 7738850 - 7738940
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||  |||||||||||| ||||||||    
T  7738850 ttgacaatatacattattgacttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttgga 7738940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 429 - 508
Target Start/End: Complemental strand, 4209589 - 4209508
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    ||||||| | ||| |||||| || ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||    
T  4209589 ttgacaatatacattattgatttgacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagat 4209508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 426 - 517
Target Start/End: Complemental strand, 39194145 - 39194052
Alignment:
Q  426 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataa--ataatcatgtaagatattgttgga 517  Q
    |||||||||| | |||||||||||||||||||||||||   ||||||||||||||| |||||||||||  || || ||||||||| ||||||||    
T  39194145 tatttgacaatatacaatattgacttaacatactttgactgtatttttctactaatacacaaagataaacattataatgtaagatgttgttgga 39194052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 3442389 - 3442465
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  3442389 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 3442465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 3901184 - 3901260
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  3901184 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 3901260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 20678633 - 20678709
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  20678633 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 20678709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 26205749 - 26205825
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  26205749 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 26205825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 47278322 - 47278398
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||||||||||  || |||||||||| |||||||    
T  47278322 tattgacttaatatactttgatcatatttttctagcaattcacaaagataaataatattatgtaagataatgttgga 47278398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 429 - 498
Target Start/End: Original strand, 55190597 - 55190666
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  55190597 ttgacaatatacattattgacttgacatactttgaccatacttttctactaattcacaaagataaataat 55190666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 3443418 - 3443508
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| ||||||||||||| |||||||||| ||  |||||||||||| ||||||||    
T  3443418 ttgacaatatacattattgacttgacatactttgaccatacttttctactaatttacaaagataagtaatatcatgtaagatgttgttgga 3443508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 5123188 - 5123278
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat--catgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||||   ||||||||| ||||||||    
T  5123188 ttgacaatatacattattgacttgacatactttgaccatacttttttactaattcacaaagataaataataagatgtaagatgttgttgga 5123278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 426 - 517
Target Start/End: Complemental strand, 19631542 - 19631448
Alignment:
Q  426 tatttgacaaaaaacaatattgacttaacatactttgatcatattttt-ctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| || | ||| ||| ||||||||||||||||| ||||||||| || ||||||||||||||||||||  |||||||||||| ||||||||    
T  19631542 tatttgataatatacattatagacttaacatactttgaccatattttttctgctaattcacaaagataaataatatcatgtaagatgttgttgga 19631448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 419 - 515
Target Start/End: Original strand, 19652277 - 19652375
Alignment:
Q  419 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttg 515  Q
    |||||| || ||||||| | ||| ||||||||| |||||||||||  ||||||||||||||||||| ||||| |||||  |||||||||||| ||||||    
T  19652277 gatgatctagttgacaatatacattattgacttgacatactttgactatatttttctactaattcaaaaagaaaaataatatcatgtaagatgttgttg 19652375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 45198371 - 45198461
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||  ||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  45198371 ttgacaatatacattattgacttaatatactttgaacataaatttatactaattcacaaagataaataatatcatgtaagatgttgttgga 45198461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 46212381 - 46212471
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| |||||||||| |||||||||||  |||||||||||| ||||||||    
T  46212381 ttgacaatatacattattgacttgacatactttgaccatacttttatactaattcataaagataaataatatcatgtaagatgttgttgga 46212471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 5735487 - 5735411
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| ||||||||||||||| |||||||||||  |||||||||||| ||||||||    
T  5735487 tattgacttgatatactttgaccatacttttctactaattcataaagataaataatatcatgtaagatgttgttgga 5735411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 19633894 - 19633970
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| || |||||||| |||||||||||||||||||| ||||| |||||  |||||||||||| ||||||||    
T  19633894 tattgacttgacctactttgaccatatttttctactaattcaaaaagaaaaataatatcatgtaagatgttgttgga 19633970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 455 - 517
Target Start/End: Original strand, 37688090 - 37688154
Alignment:
Q  455 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  37688090 atactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 37688154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 47579502 - 47579426
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  47579502 tattgacttgatatactttgaccatacttttttactaattcacaaagataaataatatcatgtaagatgttgttgga 47579426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 49768661 - 49768585
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  49768661 tattgacttgatatactttgaccatacttttttactaattcacaaagataaataatatcatgtaagatgttgttgga 49768585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 450 - 498
Target Start/End: Complemental strand, 53568560 - 53568512
Alignment:
Q  450 ttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  53568560 ttaacatattttgaccatatttttctactaattcacaaagataaataat 53568512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 1377261 - 1377172
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| |||||||||||||| |||||||  |||||||||||| ||||||||    
T  1377261 ttgacaatatacattattgacttgacatactttga-catacttttatactaattcacaaatataaataatatcatgtaagatgttgttgga 1377172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 445 - 517
Target Start/End: Original strand, 5744130 - 5744204
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| ||||||||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  5744130 ttgacttgacatactttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 5744204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 3708295 - 3708353
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  3708295 caattttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 3708353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 419 - 517
Target Start/End: Complemental strand, 23256175 - 23256075
Alignment:
Q  419 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgg 516  Q
    |||||| || ||||||| | ||| |||||| || |||||||| || |||| ||||||||||||||||||| |||||||  || ||||||||| |||||||    
T  23256175 gatgatctagttgacaatatacattattgatttgacatacttggaccatacttttctactaattcacaaaaataaataatataatgtaagatgttgttgg 23256076  T
Q  517 a 517  Q
    |    
T  23256075 a 23256075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 508
Target Start/End: Complemental strand, 55997327 - 55997260
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    ||||||||||| ||  ||||| |||||||||||||||||||||||| |||||||  ||||||||||||    
T  55997327 tattgacttaatattttttgaccatatttttctactaattcacaaaaataaataatatcatgtaagat 55997260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 10181203 - 10181128
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata-atcatgtaagatattgttgga 517  Q
    ||||||||||||||| ||||| || ||||||||||||||  ||||||||||||| ||| | |||||| ||||||||    
T  10181203 tattgacttaacatattttgaccacatttttctactaatatacaaagataaatatatcgtataagatgttgttgga 10181128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 498
Target Start/End: Complemental strand, 18881375 - 18881320
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||| |||||||||  ||||||||||||||||  |||||||||||||||    
T  18881375 tattgacttaatatactttgactatatttttctactaatatacaaagataaataat 18881320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 498
Target Start/End: Original strand, 19731211 - 19731266
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||||||||||||| ||||| ||| | |||||||| |||||||||||||    
T  19731211 tattgacttaacatactttgaccatatatttatgctaattcagaaagataaataat 19731266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 8525437 - 8525379
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| ||||||||||||||||||||||||||  |||| ||||||||||    
T  8525437 caattttgacctaacttactttgatcatatttttctactaatatacaaggataaataat 8525379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 31152703 - 31152761
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  31152703 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 31152761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 43447207 - 43447265
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  43447207 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 43447265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 517
Target Start/End: Complemental strand, 50971648 - 50971599
Alignment:
Q  470 ttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  50971648 ttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 50971599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 53987801 - 53987743
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||| || |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  53987801 caatattaacctaacttactttgaccatatttttctactaatatacaaagataaataat 53987743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 21858964 - 21859040
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| ||||||||||||||||| |||||  ||  |||||||||||| ||||||||    
T  21858964 tattgacttgatatactttgaccatacttttctactaattcacatagatacttaatatcatgtaagatgttgttgga 21859040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 21914827 - 21914903
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| ||||||||||||||||| |||||  ||  |||||||||||| ||||||||    
T  21914827 tattgacttgatatactttgaccatacttttctactaattcacatagatacttaatatcatgtaagatgttgttgga 21914903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 39786402 - 39786478
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||| || ||||||||||| |||| |||| ||||||||||||||| | ||||  |||||||||||| ||||||||    
T  39786402 tattgatttgacatactttgaccatacttttatactaattcacaaagtttaataatatcatgtaagatgttgttgga 39786478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 47834160 - 47834107
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  47834160 ttgacataacttactttgaccatatttttctactaatatacaaagataaataat 47834107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 48380520 - 48380573
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  48380520 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 48380573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 498
Target Start/End: Original strand, 27976598 - 27976670
Alignment:
Q  426 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||||| | ||||||||||  ||| ||| ||||||||||||||| || ||||  |||||||||||||||    
T  27976598 tatttgacaagatacaatattgatctaatatattttgatcatatttttttattaatatacaaagataaataat 27976670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 498
Target Start/End: Original strand, 28914409 - 28914468
Alignment:
Q  439 acaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| ||||| |||| |||||||| |||||||||||||||||  | |||||||||||||    
T  28914409 acaattttgacctaacttactttgaccatatttttctactaatatataaagataaataat 28914468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 499
Target Start/End: Original strand, 33394119 - 33394178
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataatc 499  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  || |||||||||||||    
T  33394119 caattttgacctaacttactttgaccatatttttctactaatatacgaagataaataatc 33394178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 498
Target Start/End: Original strand, 37164057 - 37164116
Alignment:
Q  439 acaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| ||||| |||| ||||||||  ||||||||||||||||  |||||||||||||||    
T  37164057 acaattttgacctaacttactttgactatatttttctactaatatacaaagataaataat 37164116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 517
Target Start/End: Original strand, 39195545 - 39195611
Alignment:
Q  453 acatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||||| ||||||||| |||||||  |||||||||||||  ||||| |||||| ||||||||    
T  39195545 acatactttgaccatatttttatactaatatacaaagataaataatatcatataagatgttgttgga 39195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Original strand, 43047440 - 43047487
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  43047440 taacttactttgaccatatttttctactaatatacaaagataaataat 43047487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 498
Target Start/End: Complemental strand, 48336697 - 48336642
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||||||| ||||| | |||||||||||||||  ||||||||| |||||    
T  48336697 tattgacttaacatattttgaccgtatttttctactaatatacaaagatagataat 48336642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Original strand, 50684973 - 50685020
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||||||||||||||||||||||||  | |||||||||||||    
T  50684973 taacttactttgatcatatttttctactaatatataaagataaataat 50685020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 498
Target Start/End: Complemental strand, 55014475 - 55014420
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||||||||||||||||| | ||| ||  |||||| |||||||||||||    
T  55014475 tattgacttaacatactttgatcatttatttttaaaaattcataaagataaataat 55014420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 1613223 - 1613181
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  1613223 tactttgaccatatttttctactaatatacaaagataaataat 1613181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 10384890 - 10384948
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||| | |||||||||||||||||  |||||||||||||||    
T  10384890 caattttgacctaacttactttaaccatatttttctactaatatacaaagataaataat 10384948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 28909861 - 28909803
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||||  |||||||| ||||||||||||||||   |||||||||||||||    
T  28909861 caattttgacttaaattactttgaccatatttttctactaaaatacaaagataaataat 28909803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 39171000 - 39171058
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| || ||||| |||||||||||||||||  |||||||||||||||    
T  39171000 caattttgacctaacttattttgaccatatttttctactaatatacaaagataaataat 39171058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 517
Target Start/End: Complemental strand, 14958203 - 14958139
Alignment:
Q  455 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| |||||||||||||||||  ||||| |||||||  ||||| |||||| ||||||||    
T  14958203 atactttgaccatatttttctactaatatacaaaaataaataatatcatataagatgttgttgga 14958139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 46608260 - 46608313
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| |||||||| ||||||||| |||||||  |||||||||||||||    
T  46608260 ttgacctaacttactttgaccatatttttatactaatatacaaagataaataat 46608313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 508
Target Start/End: Complemental strand, 26660614 - 26660559
Alignment:
Q  455 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    ||||||||| |||||||||||| ||||||| |||| ||||||  ||||||||||||    
T  26660614 atactttgaccatatttttctattaattcataaaggtaaataatatcatgtaagat 26660559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 4e-24; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 419 - 517
Target Start/End: Complemental strand, 3529416 - 3529316
Alignment:
Q  419 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgg 516  Q
    ||||| ||||||||||| | | | ||||||||||||||||||||| |||||||||||||||||||| |||||||||||  |||||||||||| |||||||    
T  3529416 gatgacttatttgacaatatatattattgacttaacatactttgaccatatttttctactaattcataaagataaataatatcatgtaagatgttgttgg 3529317  T
Q  517 a 517  Q
    |    
T  3529316 a 3529316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 411 - 517
Target Start/End: Original strand, 21034542 - 21034650
Alignment:
Q  411 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    ||||||| ||| || |||||||||| | ||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||  |||||||| |||    
T  21034542 cctcaatagataatctatttgacaatatacattattgacttaacatactttgattatatttttctactaaatcacaaagataaataatatcatgtaggat 21034641  T
Q  509 attgttgga 517  Q
     ||||||||    
T  21034642 gttgttgga 21034650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 16265263 - 16265173
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  16265263 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 16265173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 16266392 - 16266302
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  16266392 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 16266302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 24982567 - 24982491
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  24982567 tattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 24982491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 3898602 - 3898692
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  || ||||||||| ||||||||    
T  3898602 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatattatgtaagatgttgttgga 3898692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 397 - 517
Target Start/End: Complemental strand, 4605260 - 4605139
Alignment:
Q  397 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 496  Q
    ||||||||||||  ||| ||| |||||  |||||||||| | ||| ||||||||| ||||||||||  |||||||| ||| |||||||||||||||||||    
T  4605260 tactccctccgtc-ccttaatagatgacctatttgacaatatacattattgactttacatactttggccatattttcctattaattcacaaagataaata 4605162  T
Q  497 --atcatgtaagatattgttgga 517  Q
      |||||||||||||||||||||    
T  4605161 atatcatgtaagatattgttgga 4605139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 29162073 - 29161983
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| | |||||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  29162073 ttgacaatatacattattgacttgagatactttgatcatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 29161983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 413 - 517
Target Start/End: Original strand, 31971402 - 31971508
Alignment:
Q  413 tcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatat 510  Q
    ||||||||| ||||||||||||| | | | |||| | |||||||| |||||||||||||||||||||||| |||||||||||||  ||||| |||||| |    
T  31971402 tcaatggataatttatttgacaatatatattattaatttaacatattttgatcatatttttctactaattaacaaagataaataatatcatataagatgt 31971501  T
Q  511 tgttgga 517  Q
    |||||||    
T  31971502 tgttgga 31971508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 397 - 517
Target Start/End: Complemental strand, 37281353 - 37281232
Alignment:
Q  397 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 496  Q
    ||||||||||||  ||| ||| |||||| || ||||||| | | | ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  37281353 tactccctccgtc-ccttaatagatgatctagttgacaatatatattattgacttgacatactttgaccatacttttctactaattcacaaagataaata 37281255  T
Q  497 --atcatgtaagatattgttgga 517  Q
      |||||||||||| ||||||||    
T  37281254 atatcatgtaagatgttgttgga 37281232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 23569719 - 23569795
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| || |||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  23569719 tattgacttgacgtactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 23569795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 429 - 498
Target Start/End: Complemental strand, 26441864 - 26441795
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  26441864 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataat 26441795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 429 - 498
Target Start/End: Complemental strand, 43680300 - 43680231
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  43680300 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataat 43680231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 498
Target Start/End: Complemental strand, 47222465 - 47222376
Alignment:
Q  409 ttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||||  ||||  ||||||| || | ||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  47222465 ttcctcaataaatgacctatttgataatatacattattgacttaacatactttgaccatatttttttactaattcacaaagataaataat 47222376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 25532008 - 25531918
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  25532008 ttgacaatatacattattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 25531918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 443 - 498
Target Start/End: Original strand, 38737877 - 38737932
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38737877 tattgatttaacatactttaatcatatttttctactaattcacaaagataaataat 38737932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 426 - 517
Target Start/End: Complemental strand, 50481509 - 50481416
Alignment:
Q  426 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat--catgtaagatattgttgga 517  Q
    |||||||||| | ||| ||||||| |||||||||||||  || ||||||||||||||||||||| ||||||||  |||||||||| ||||||||    
T  50481509 tatttgacaatatacattattgacctaacatactttgacaatttttttctactaattcacaaaggtaaataataccatgtaagatgttgttgga 50481416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 429 - 498
Target Start/End: Original strand, 16751484 - 16751553
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||| | ||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  16751484 ttgacaatatacattattgacttaacatattttgaccatatttttttactaattcacaaagataaataat 16751553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 42708716 - 42708640
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  42708716 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 42708640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 50876580 - 50876504
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  50876580 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 50876504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 444 - 517
Target Start/End: Complemental strand, 50539475 - 50539400
Alignment:
Q  444 attgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||| ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  50539475 attgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 50539400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 515
Target Start/End: Complemental strand, 14075963 - 14075876
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat-catgtaagatattgttg 515  Q
    ||||||| | ||| ||||||||||||||| ||| | |||||||||||||||||||||||| |||||||||  ||||||||| ||||||    
T  14075963 ttgacaatatacattattgacttaacatattttaaccatatttttctactaattcacaaatataaataatatatgtaagatgttgttg 14075876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 30529081 - 30529171
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| | ||| ||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  30529081 ttgacaatatacattattgacttgagataatttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 30529171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 38458960 - 38458870
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||| | ||||||||    
T  38458960 ttgacaatatacattattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaaggtgttgttgga 38458870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 1849931 - 1849840
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata---atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| || | ||||||||||||||||||| |||||||   |||||||||||| ||||||||    
T  1849931 ttgacaatatacattattgacttgacatactttgaccacacttttctactaattcacaaaaataaataagtatcatgtaagatgttgttgga 1849840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 419 - 496
Target Start/End: Complemental strand, 27581116 - 27581039
Alignment:
Q  419 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 496  Q
    ||||||||||||||||| |   ||| ||||| |||||||||||||||||||||||||| ||||  |||||||||||||    
T  27581116 gatgatttatttgacaatatgtaattttgacctaacatactttgatcatatttttctaataatatacaaagataaata 27581039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 39354309 - 39354385
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||| ||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  39354309 tattgacttgatatattttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 39354385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 52379205 - 52379129
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| ||||||||||||||| |||||||||||  |||||||||||| ||||||||    
T  52379205 tattgacttgatatactttgaccatacttttctactaattcataaagataaataatatcatgtaagatgttgttgga 52379129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 515
Target Start/End: Original strand, 27990760 - 27990834
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttg 515  Q
    ||||||| ||||||||||||| |||||||||||||||||  ||||| |||||||  |||||||||||| ||||||    
T  27990760 tattgacctaacatactttgaccatatttttctactaatatacaaaaataaataacatcatgtaagatgttgttg 27990834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 32988380 - 32988470
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||| ||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  32988380 ttgacaatatacattattgacttgacatattttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 32988470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 445 - 517
Target Start/End: Original strand, 49805299 - 49805373
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| ||||||||||| || |||||  ||||||||||||||||||||||  |||||||||||| ||||||||    
T  49805299 ttgacttgacatactttgaccacattttaatactaattcacaaagataaataatatcatgtaagatgttgttgga 49805373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 48219687 - 48219763
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | |||| |||| |||| ||||||| |||||||||||||||||||  |||||||||||| ||||||||    
T  48219687 tattgacttgatatacgttgaccatacttttctagtaattcacaaagataaataatatcatgtaagatgttgttgga 48219763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 517
Target Start/End: Original strand, 48264868 - 48264932
Alignment:
Q  455 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| |||| ||||||||||||||| |||||||||||  |||||||||||| ||||||||    
T  48264868 atactttgaccatacttttctactaattcagaaagataaataatatcatgtaagatgttgttgga 48264932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 514
Target Start/End: Original strand, 38737378 - 38737496
Alignment:
Q  397 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataa--a 494  Q
    ||||||||||||  || |||| |||||| ||||||||||   | |||||||||||||||| |||||||  |||||||||||||||  | ||||||||  |    
T  38737378 tactccctccgtc-ccacaatagatgatctatttgacaatgtataatattgacttaacattctttgattgtatttttctactaatatataaagataaaca 38737476  T
Q  495 taatcatgtaagatattgtt 514  Q
    | |||||||||||| |||||    
T  38737477 ttatcatgtaagatgttgtt 38737496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 517
Target Start/End: Complemental strand, 48376378 - 48376288
Alignment:
Q  426 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||||| | ||| ||||||||||| ||||||||| ||| |||||   |||||||||||||||| |||  |||||||||||| ||||||||    
T  48376378 tatttgacaatatacattattgacttaagatactttgaacatgttttt---ctaattcacaaagatagataatatcatgtaagatgttgttgga 48376288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 451 - 498
Target Start/End: Complemental strand, 2139044 - 2138997
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  2139044 taacttactttgatcatatttttctactaatatacaaagataaataat 2138997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 439 - 498
Target Start/End: Original strand, 26543909 - 26543968
Alignment:
Q  439 acaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  26543909 acaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 26543968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 10100539 - 10100481
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  10100539 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 10100481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 10124151 - 10124209
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  10124151 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 10124209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 517
Target Start/End: Complemental strand, 23330673 - 23330592
Alignment:
Q  439 acaatattgacttaacat-actttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||||||||||||| |||||||  || ||||| | |||||||||||| |||||||  |||||||||||| ||||||||    
T  23330673 acaatattgacttaacattactttgacaatgtttttatgctaattcacaaacataaataatatcatgtaagatgttgttgga 23330592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 36035744 - 36035786
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  36035744 tactttgatcatatttttctactaatatacaaagataaataat 36035786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 49903695 - 49903653
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  49903695 tactttgatcatatttttctactaatatacaaagataaataat 49903653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 41501652 - 41501728
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||| || ||||||||||||||||  || ||||||||||||| | |||||||  |||||||||||| ||||||||    
T  41501652 tattgaattgacatactttgatcatacattcctactaattcacacaaataaataatatcatgtaagatgttgttgga 41501728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Complemental strand, 6017464 - 6017417
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  6017464 taacttactttgaccatatttttctactaatatacaaagataaataat 6017417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Complemental strand, 7075345 - 7075298
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  7075345 taacttactttgaccatatttttctactaatatacaaagataaataat 7075298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Complemental strand, 38786961 - 38786914
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||||||||||||||||| ||||||  |||||||||||||||    
T  38786961 taacttactttgatcatatttttcaactaatatacaaagataaataat 38786914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 45299360 - 45299418
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| ||||||||| |||||||  |||||||||||||||    
T  45299360 caattttgacctaacttactttgaccatatttttatactaatatacaaagataaataat 45299418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 48312070 - 48312128
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||| |||||| || ||||||| |||||||||||||||  |||||||||||||||    
T  48312070 caattttggcttaacttattttgatcgtatttttctactaatatacaaagataaataat 48312128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 498
Target Start/End: Original strand, 3555259 - 3555304
Alignment:
Q  453 acatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||||||  ||||||||||||||||  |||||||||||||||    
T  3555259 acatactttgaatatatttttctactaatatacaaagataaataat 3555304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 23337854 - 23337907
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| || ||||| |||||||||||||||||  |||||||||||||||    
T  23337854 ttgacctaacttagtttgaccatatttttctactaatatacaaagataaataat 23337907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 498
Target Start/End: Complemental strand, 30005820 - 30005775
Alignment:
Q  453 acatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||| |||||||||||||||||||  ||||| |||||||||    
T  30005820 acatactttaatcatatttttctactaatatacaaaaataaataat 30005775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 498
Target Start/End: Original strand, 31698638 - 31698683
Alignment:
Q  453 acatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||||||||||||| || ||||  |||||||||||||||    
T  31698638 acatactttgatcatatttttttattaatatacaaagataaataat 31698683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 510
Target Start/End: Original strand, 40883458 - 40883525
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatat 510  Q
    ||||| |||| ||||||||||||||||||| ||||||  ||||| |||||||  ||||| ||||||||    
T  40883458 ttgacctaacttactttgatcatatttttcaactaatatacaaatataaatagtatcatataagatat 40883525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 412 - 517
Target Start/End: Original strand, 13206967 - 13207074
Alignment:
Q  412 ctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagata 509  Q
    |||||| |||||  |||||||||| | ||  |||||||||||||| |||||| ||||||||||||||||||||||||||||||||  ||||||||||||     
T  13206967 ctcaatagatgacctatttgacaatatactttattgacttaacattctttgaccatatttttctactaattcacaaagataaataatatcatgtaagatg 13207066  T
Q  510 ttgttgga 517  Q
    ||||||||    
T  13207067 ttgttgga 13207074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 8796279 - 8796189
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||||||||||||    
T  8796279 ttgacaatatacattattgacttaacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatattgttgga 8796189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 397 - 517
Target Start/End: Original strand, 16696016 - 16696137
Alignment:
Q  397 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 496  Q
    ||||||||||||  ||||||| |||||  || ||||||| | |||  |||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  16696016 tactccctccgtc-cctcaatagatgacctagttgacaatatacatcattgacttgacatactttgaccatatttttctactaattcacaaagataaata 16696114  T
Q  497 --atcatgtaagatattgttgga 517  Q
      |||||||||||| ||||||||    
T  16696115 atatcatgtaagatgttgttgga 16696137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 25163394 - 25163304
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  25163394 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatataagatattgttgga 25163304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 411 - 514
Target Start/End: Original strand, 19068784 - 19068889
Alignment:
Q  411 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    ||||||| |||||| ||||||||||||  || |||||| |||||||||||||| |||||||||||||||||||||||||| || ||  ||||||||||||    
T  19068784 cctcaatagatgatctatttgacaaaatgcattattgatttaacatactttgaccatatttttctactaattcacaaagagaagtaatatcatgtaagat 19068883  T
Q  509 attgtt 514  Q
     |||||    
T  19068884 gttgtt 19068889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 18992133 - 18992043
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||  |||||||||||| ||||||||    
T  18992133 ttgacaatatacattattgacttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttgga 18992043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 30237397 - 30237307
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |  || |||||||||||| |||||    
T  30237397 ttgacaatatacattattgacttgacatactttgaccatatttttctactaattcacaaagataaacaatataatgtaagatattattgga 30237307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 20662104 - 20662180
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  20662104 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 20662180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 455 - 517
Target Start/End: Original strand, 29986215 - 29986279
Alignment:
Q  455 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  29986215 atactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 29986279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 25435641 - 25435551
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| |||||| || ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  25435641 ttgacaatatacattattgatttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 25435551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 7097918 - 7097994
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||  |||||||||||| | ||||||    
T  7097918 tattgacttaacatactttgaccatacttttatactaattcataaagataaataatatcatgtaagatgtagttgga 7097994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 24150957 - 24150881
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| ||||||| |||||||||||||||||||  |||||||||||| ||||||||    
T  24150957 tattgacttgatatactttgaccatacttttctattaattcacaaagataaataatatcatgtaagatgttgttgga 24150881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 33121758 - 33121682
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| |  |||||||| |||||||||||||||||||| |||||||||||  |||||||||||| ||||||||    
T  33121758 tattgacttgatgtactttgaccatatttttctactaattcataaagataaataatatcatgtaagatgttgttgga 33121682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 444 - 517
Target Start/End: Original strand, 643477 - 643552
Alignment:
Q  444 attgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||| ||||||||||| |||| |||| |||||| |||||||||||||||  |||||||||||| ||||||||    
T  643477 attgacttgacatactttgaccatacttttatactaagtcacaaagataaataatatcatgtaagatgttgttgga 643552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 439 - 498
Target Start/End: Original strand, 2141609 - 2141668
Alignment:
Q  439 acaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  2141609 acaattttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 2141668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 11114795 - 11114705
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| |||||| || ||||| ||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  11114795 ttgacaatatacattattgatttgacatattttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 11114705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 22020506 - 22020416
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||| | || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  22020506 ttgacaatatacattattgacttgacatactttaaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 22020416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 6142533 - 6142475
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  6142533 caattttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 6142475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 29515052 - 29514994
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  29515052 caattttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 29514994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 31855034 - 31854958
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| ||||||||||| || | |||| || |||||||||||||||||||  |||||||||||| ||||||||    
T  31855034 tattgacttgacatactttgaccacacttttatattaattcacaaagataaataatatcatgtaagatgttgttgga 31854958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 9022882 - 9022940
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| ||||||||||||| |||||||||||||||||  ||||| |||||||||    
T  9022882 caattttgacctaacatactttgaccatatttttctactaatatacaaaaataaataat 9022940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 17496344 - 17496286
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  17496344 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 17496286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 24798572 - 24798514
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  24798572 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 24798514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 24825207 - 24825265
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  24825207 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 24825265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 12869435 - 12869382
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||| ||||| ||||| |||||||||||||||||  |||||||||||||||    
T  12869435 ttgacttgacatagtttgaccatatttttctactaatatacaaagataaataat 12869382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 30699308 - 30699361
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  30699308 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 30699361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 517
Target Start/End: Original strand, 19788633 - 19788699
Alignment:
Q  453 acatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | |||||||||||||||||  ||||| |||||||  |||||||||||| ||||||||    
T  19788633 acatactttaaccatatttttctactaatatacaaatataaataatatcatgtaagatgttgttgga 19788699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 2397828 - 2397870
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  2397828 tactttgaccatatttttctactaatatacaaagataaataat 2397870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 2656696 - 2656638
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| ||||||||  ||||||||||||||||  |||||||||||||||    
T  2656696 caattttgacctaacttactttgactatatttttctactaatatacaaagataaataat 2656638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 2667351 - 2667293
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| ||||||||  ||||||||||||||||  |||||||||||||||    
T  2667351 caattttgacctaacttactttgactatatttttctactaataaacaaagataaataat 2667293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 481
Target Start/End: Complemental strand, 3686992 - 3686954
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaat 481  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  3686992 tattgacctaacatactttgatcatatttttctattaat 3686954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 4890136 - 4890094
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  4890136 tactttgaccatatttttctactaatatacaaagataaataat 4890094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 16969420 - 16969478
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||||  |||||||| |||||||||||||||||  ||||| |||||||||    
T  16969420 caattttgacttaatttactttgaccatatttttctactaatatacaaatataaataat 16969478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 498
Target Start/End: Complemental strand, 17417728 - 17417682
Alignment:
Q  452 aacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||| ||| |||||||||||||||||||  |||||||||||||||    
T  17417728 aacataatttaatcatatttttctactaatatacaaagataaataat 17417682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 31708935 - 31708993
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||||  |||||||| | |||||||||||||||  |||||||||||||||    
T  31708935 caattttgacttaatttactttgaccgtatttttctactaatatacaaagataaataat 31708993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 32541487 - 32541445
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  32541487 tactttgaccatatttttctactaatatacaaagataaataat 32541445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 498
Target Start/End: Original strand, 16434598 - 16434643
Alignment:
Q  453 acatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||| |||||||||| ||||||  |||||||||||||||    
T  16434598 acatactttgaccatatttttccactaatatacaaagataaataat 16434643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 499
Target Start/End: Original strand, 6612220 - 6612276
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataatc 499  Q
    |||||| |||||||||||||||||| ||||| ||||||   |||| |||||||||||    
T  6612220 tattgaattaacatactttgatcatttttttttactaaaatacaatgataaataatc 6612276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 453 - 481
Target Start/End: Original strand, 34500928 - 34500956
Alignment:
Q  453 acatactttgatcatatttttctactaat 481  Q
    |||||||||||||||||||||||||||||    
T  34500928 acatactttgatcatatttttctactaat 34500956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 6e-23; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 16048315 - 16048225
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  16048315 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 16048225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 22613740 - 22613830
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  22613740 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 22613830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 397 - 517
Target Start/End: Original strand, 37843575 - 37843696
Alignment:
Q  397 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 496  Q
    ||||||||||||  ||||||| |||||  || ||||||| | ||| ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  37843575 tactccctccgtc-cctcaatagatgacctacttgacaatatacattattgacttgacatactttgaccatatttttctactaattcacaaagaaaaata 37843673  T
Q  497 --atcatgtaagatattgttgga 517  Q
      |||||||||||| ||||||||    
T  37843674 atatcatgtaagatgttgttgga 37843696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 39405994 - 39405904
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  39405994 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 39405904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 426 - 517
Target Start/End: Original strand, 41411185 - 41411278
Alignment:
Q  426 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||||| | | | |||||||||||| |||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  41411185 tatttgacaatatatattattgacttaacgtactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 41411278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 411 - 517
Target Start/End: Complemental strand, 2864202 - 2864094
Alignment:
Q  411 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 508  Q
    ||||||| |||||  ||||||| || | ||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||  ||||| ||||||    
T  2864202 cctcaatagatgacatatttgataatatacattattgacttaacatactttcaccatatttttctactaattcacaaagataaataatatcatataagat 2864103  T
Q  509 attgttgga 517  Q
     ||||||||    
T  2864102 gttgttgga 2864094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 4299864 - 4299954
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  ||||| |||||| ||||||||    
T  4299864 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatataagatgttgttgga 4299954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 14475261 - 14475351
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||  |||||||||||| ||||||||    
T  14475261 ttgacaatatacattattgacttgacatactttgaccatatttttctactaattcacaaagaaaaataatatcatgtaagatgttgttgga 14475351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 443 - 515
Target Start/End: Complemental strand, 25563716 - 25563642
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaat--aatcatgtaagatattgttg 515  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||    
T  25563716 tattgatttaacatactttgatcatatttttctactaattcacaaagataaattatatcatgtaagatgttgttg 25563642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 37516375 - 37516285
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  37516375 ttgacaatatacattattgacttgatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 37516285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 39036640 - 39036550
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  39036640 ttgacaatatacattattgacttgtcatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 39036550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 426 - 517
Target Start/End: Complemental strand, 1830888 - 1830795
Alignment:
Q  426 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||||| | | | |||||||||||| |||||||| |||||||||||||||||||| |||||||||||  |||||||||||| ||||||||    
T  1830888 tatttgacaatatatattattgacttaacgtactttgaccatatttttctactaattcataaagataaataatatcatgtaagatgttgttgga 1830795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 19868731 - 19868807
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||  |||||||||||| || |||||    
T  19868731 tattgacttaacatactttgaagatatttttctactaattcacaaagataaataatatcatgtaagatgttattgga 19868807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 43517105 - 43517181
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||| || |||||    
T  43517105 tattgacttgacatactttgatcatacttttctactaattcacaaagataaataatatcatgtaagatgttattgga 43517181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 426 - 498
Target Start/End: Original strand, 19087644 - 19087716
Alignment:
Q  426 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||||| | ||| |||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  19087644 tatttgacaatatacattattgatttaatatactttgaccatatttttctactaattcacaaagataaataat 19087716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 412 - 517
Target Start/End: Original strand, 30779760 - 30779867
Alignment:
Q  412 ctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagata 509  Q
    |||||| ||||| ||| ||||||| | ||| |||||| |||| | |||||||| ||||||||||||||||| |||||||||||||  ||||||||||||     
T  30779760 ctcaatagatgacttagttgacaatatacattattgatttaatacactttgattatatttttctactaatttacaaagataaataatatcatgtaagatg 30779859  T
Q  510 ttgttgga 517  Q
    ||||||||    
T  30779860 ttgttgga 30779867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 970368 - 970278
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| |||| |||||| ||||||||| ||||||||||||||||||||||||||||||||  ||||| |||||| ||||||||    
T  970368 ttgacaatatacattattaacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatataagatgttgttgga 970278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 5212953 - 5213043
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||  |||||||||||| ||||||||    
T  5212953 ttgacaatatacattattgacttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttgga 5213043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 32002045 - 32002135
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  32002045 ttgacaatatacattattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 32002135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 35290516 - 35290426
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||  || ||||||||| ||||||||    
T  35290516 ttgacaatatacattattgacttgtcatactttgaccatatttttctactaattcacaaagataaataatattatgtaagatgttgttgga 35290426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 39895011 - 39894921
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||  ||||| |||||| ||||||||    
T  39895011 ttgacaatatacattattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatataagatgttgttgga 39894921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 426 - 517
Target Start/End: Complemental strand, 40316355 - 40316262
Alignment:
Q  426 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||||| | | | |||||||||||| || ||||| |||||||||||||||||||| |||||||||||  |||||||||||| ||||||||    
T  40316355 tatttgacaatatatattattgacttaacgtaatttgaccatatttttctactaattcataaagataaataatatcatgtaagatgttgttgga 40316262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 4924883 - 4924959
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  4924883 tattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 4924959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 23988793 - 23988717
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  23988793 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 23988717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 42148523 - 42148447
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  42148523 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 42148447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 40512711 - 40512801
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| |||||| || |||||||||||  ||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  40512711 ttgacaatatacattattgatttgacatactttgactatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 40512801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 429 - 498
Target Start/End: Complemental strand, 5364654 - 5364585
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||| | ||| ||||||||| ||||| ||||| |||| |||||||||||||||||||||||||||||    
T  5364654 ttgacaatatacattattgacttgacatattttgaccatacttttctactaattcacaaagataaataat 5364585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 429 - 498
Target Start/End: Complemental strand, 43067451 - 43067382
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||| | ||| |||||| |||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  43067451 ttgacaatatacattattgatttaatatactttgaccatatttttctactaatttacaaagataaataat 43067382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 444 - 517
Target Start/End: Complemental strand, 29627483 - 29627408
Alignment:
Q  444 attgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||| |||||||||||  ||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  29627483 attgacttgacatactttgactatacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 29627408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 33402608 - 33402555
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  33402608 ttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 33402555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 35448042 - 35448118
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat--catgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||| ||||||||||||||||||||||||  ||| |||||| ||||||||    
T  35448042 tattgacttgatatactttgaccatacttttttactaattcacaaagataaataataacatctaagatgttgttgga 35448118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 38698179 - 38698103
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat--catgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| ||||||||| |||||||| |||||||| ||||||  |||||||||| ||||||||    
T  38698179 tattgacttgatatactttgaccatatttttttactaatttacaaagatgaataatatcatgtaagatgttgttgga 38698103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 450 - 498
Target Start/End: Complemental strand, 15268602 - 15268554
Alignment:
Q  450 ttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  15268602 ttaacatactttgaccatatttttctacttattcacatagataaataat 15268554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 32334669 - 32334759
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| |||||| || ||||||||||| || | |||| |||||||| |||||||||||||  |||||||||||| ||||||||    
T  32334669 ttgacaatatacattattgatttgacatactttgaccacacttttatactaattgacaaagataaataatatcatgtaagatgttgttgga 32334759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 1098217 - 1098275
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  1098217 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 1098275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 13548255 - 13548313
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  13548255 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 13548313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 14057750 - 14057808
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| ||||||||||||||||||||| ||||  |||||||||||||||    
T  14057750 caattttgacctaacttactttgatcatatttttctattaatatacaaagataaataat 14057808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 20022902 - 20022960
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  20022902 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 20022960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 20040437 - 20040379
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  20040437 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 20040379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 41263151 - 41263093
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  41263151 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 41263093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 30788252 - 30788305
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  30788252 ttgacataacttactttgaccatatttttctactaatatacaaagataaataat 30788305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Complemental strand, 30211752 - 30211705
Alignment:
Q  451 taacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  30211752 taacttactttgaccatatttttctactaatatacaaagataaataat 30211705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 1781151 - 1781109
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  1781151 tactttgaccatatttttctactaatatacaaagataaataat 1781109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 14633049 - 14633107
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| ||||||||||||| |||  |||||||||||||||    
T  14633049 caattttgacctaacttactttgaccatatttttctacaaatatacaaagataaataat 14633107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 461
Target Start/End: Complemental strand, 15268644 - 15268602
Alignment:
Q  419 gatgatttatttgacaaaaaacaatattgacttaacatacttt 461  Q
    |||||| | ||||||||||||||||||| ||||||||||||||    
T  15268644 gatgatctttttgacaaaaaacaatattcacttaacatacttt 15268602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 19344721 - 19344663
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| || ||||| |||||||||||||||||  |||||||||||||||    
T  19344721 caattttgacctaacttattttgaccatatttttctactaatatacaaagataaataat 19344663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 481
Target Start/End: Complemental strand, 25773425 - 25773387
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaat 481  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  25773425 tattgacctaacatactttgaccatatttttctactaat 25773387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 498
Target Start/End: Complemental strand, 27477752 - 27477702
Alignment:
Q  448 acttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||||||||||| | ||||||| |||||||  |||||||||||||||    
T  27477752 acttaacatactttgaccgtatttttttactaatatacaaagataaataat 27477702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 27675598 - 27675640
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||||||||||||||||||  ||| |||||||||||    
T  27675598 tactttgatcatatttttctactaatatacatagataaataat 27675640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 28142986 - 28143028
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  28142986 tactttgaccatatttttctactaatatacaaagataaataat 28143028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 517
Target Start/End: Original strand, 5985008 - 5985060
Alignment:
Q  467 tatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||||||||||  |||||||||||||  ||||| |||||||||||||||    
T  5985008 tatttttctactaatatacaaagataaataatatcatataagatattgttgga 5985060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 498
Target Start/End: Complemental strand, 21961445 - 21961388
Alignment:
Q  441 aatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||| ||||||||||| ||||||| |||||||||  | ||| |||||||||    
T  21961445 aatattgacttgacatactttgaccatatttatctactaatatataaaaataaataat 21961388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 25946177 - 25946230
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||||||||||| |||| | |||||||||||||| ||  |||||||||||||||    
T  25946177 ttgacttaacattctttaaccatatttttctactgatatacaaagataaataat 25946230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 498
Target Start/End: Original strand, 35641824 - 35641869
Alignment:
Q  453 acatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||| |||||||||||||||||  | |||||||||||||    
T  35641824 acatactttgaccatatttttctactaatatataaagataaataat 35641869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 12982 - 12892
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  12982 ttgacaatatacattattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 12892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 10623 - 10533
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  10623 ttgacaatatacattattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 10533  T

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Target: scaffold0366; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 14289 - 14199
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||  |||||||||||| ||||||||    
T  14289 ttgacaatatacattattgacttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttgga 14199  T

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Target: scaffold0027 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 443 - 515
Target Start/End: Complemental strand, 117537 - 117463
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttg 515  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||    
T  117537 tattgacttgatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttg 117463  T

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Target: scaffold0092 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 44153 - 44229
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  44153 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 44229  T

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Target: scaffold0604 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 456 - 517
Target Start/End: Complemental strand, 1317 - 1254
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    |||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  1317 tactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 1254  T

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Target: scaffold0111 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 498
Target Start/End: Original strand, 38243 - 38332
Alignment:
Q  409 ttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||| |||||  |||||||||| | ||| | |||| |||| ||||||||| |||||||||||||||| |||||||| ||||||||    
T  38243 ttcctcaatagatgacctatttgacaatatacatttttgatttaaaatactttgaccatatttttctactaagtcacaaaggtaaataat 38332  T

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Target: scaffold0051 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 517
Target Start/End: Original strand, 41262 - 41338
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||||| ||||||||| | |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  41262 tattgacttgacatactttaaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 41338  T

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Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 15247 - 15337
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 517  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |  |||||||||| |||||||||||||  |||||||||||| ||||||||    
T  15247 ttgacaatatacattattgacttgacatactttgaccatactagtctactaatttacaaagataaataatatcatgtaagatgttgttgga 15337  T

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Target: scaffold0221 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 5418 - 5476
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  5418 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 5476  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 184008 - 184066
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  184008 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 184066  T

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Target: scaffold0204 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 498
Target Start/End: Complemental strand, 24219 - 24164
Alignment:
Q  443 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||||||||||||| ||||| | |||||||||||||||  ||||||||| |||||    
T  24219 tattgacttaacatattttgaccgtatttttctactaatatacaaagatagataat 24164  T

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Target: scaffold0500 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 697 - 639
Alignment:
Q  440 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    |||| ||||| |||| || ||||| |||||||||||||||||  |||||||||||||||    
T  697 caattttgacctaacttagtttgaccatatttttctactaatatacaaagataaataat 639  T

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Target: scaffold0340 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 429 - 495
Target Start/End: Complemental strand, 14568 - 14502
Alignment:
Q  429 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaat 495  Q
    ||||||| | ||| |||||| || | |||||||||  ||||||||||||||||||||||||| ||||    
T  14568 ttgacaatatacattattgatttgatatactttgactatatttttctactaattcacaaagaaaaat 14502  T

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Target: scaffold1248 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 1473 - 1420
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| |||||||| |||||||||||||||||  ||||| |||||||||    
T  1473 ttgacataacttactttgaccatatttttctactaatatacaaaaataaataat 1420  T

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Target: scaffold0952 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 840 - 893
Alignment:
Q  445 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 498  Q
    ||||| |||| |||||||| |||||||||||||||||  ||||| |||||||||    
T  840 ttgacataacttactttgaccatatttttctactaatatacaaaaataaataat 893  T

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Target: scaffold0281 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 514
Target Start/End: Original strand, 13162 - 13222
Alignment:
Q  456 tactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgtt 514  Q
    |||||||| |||||||||||||||||  ||| |||||||||  ||||| ||||||||||||    
T  13162 tactttgaccatatttttctactaatatacatagataaataatatcatataagatattgtt 13222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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