View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1126_low_71 (Length: 420)

Name: NF1126_low_71
Description: NF1126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1126_low_71
NF1126_low_71
[»] chr8 (10 HSPs)
chr8 (30-410)||(5840264-5840640)
chr8 (123-175)||(29490376-29490428)
chr8 (108-176)||(23961665-23961733)
chr8 (123-178)||(10028655-10028710)
chr8 (135-177)||(23768775-23768817)
chr8 (137-175)||(32029662-32029700)
chr8 (121-175)||(41424410-41424464)
chr8 (135-176)||(21136603-21136644)
chr8 (125-178)||(32029411-32029464)
chr8 (194-238)||(42941193-42941237)
[»] scaffold0360 (1 HSPs)
scaffold0360 (30-375)||(4600-4941)
[»] chr4 (10 HSPs)
chr4 (190-418)||(6349978-6350192)
chr4 (121-178)||(39051105-39051162)
chr4 (123-175)||(44137393-44137445)
chr4 (128-177)||(55264653-55264702)
chr4 (121-166)||(13302236-13302281)
chr4 (121-166)||(13432688-13432733)
chr4 (121-170)||(13432781-13432830)
chr4 (121-169)||(3692058-3692106)
chr4 (121-177)||(5162836-5162892)
chr4 (136-176)||(40942598-40942638)
[»] chr6 (8 HSPs)
chr6 (88-174)||(21969298-21969385)
chr6 (119-176)||(8446943-8447000)
chr6 (119-176)||(8455747-8455804)
chr6 (121-177)||(21394256-21394312)
chr6 (121-176)||(3960874-3960929)
chr6 (121-175)||(19122008-19122062)
chr6 (121-177)||(9530549-9530605)
chr6 (123-175)||(26330339-26330391)
[»] chr2 (5 HSPs)
chr2 (122-177)||(22191535-22191590)
chr2 (97-177)||(17184753-17184834)
chr2 (127-178)||(17672952-17673003)
chr2 (123-176)||(32014000-32014053)
chr2 (137-177)||(6511035-6511075)
[»] chr3 (11 HSPs)
chr3 (121-176)||(39840661-39840716)
chr3 (121-175)||(40472832-40472886)
chr3 (121-177)||(55447203-55447259)
chr3 (121-176)||(45965675-45965730)
chr3 (121-166)||(34763141-34763186)
chr3 (125-175)||(3910237-3910287)
chr3 (121-175)||(27812207-27812261)
chr3 (123-177)||(48338573-48338627)
chr3 (121-178)||(40860971-40861028)
chr3 (137-178)||(51862691-51862731)
chr3 (123-175)||(45965827-45965879)
[»] chr7 (7 HSPs)
chr7 (97-166)||(30935371-30935440)
chr7 (121-176)||(42709919-42709974)
chr7 (123-177)||(41008943-41008997)
chr7 (126-175)||(41008801-41008850)
chr7 (133-178)||(26752035-26752080)
chr7 (121-177)||(43669486-43669540)
chr7 (121-165)||(16830294-16830338)
[»] scaffold0154 (1 HSPs)
scaffold0154 (123-175)||(6243-6295)
[»] chr5 (9 HSPs)
chr5 (121-172)||(39643020-39643071)
chr5 (121-177)||(31046162-31046218)
chr5 (105-176)||(36184758-36184830)
chr5 (135-177)||(8285259-8285301)
chr5 (121-175)||(11275811-11275865)
chr5 (121-178)||(12640232-12640288)
chr5 (125-166)||(39174627-39174668)
chr5 (121-177)||(31051223-31051279)
chr5 (121-177)||(31066103-31066159)
[»] chr1 (8 HSPs)
chr1 (121-176)||(38783894-38783949)
chr1 (135-177)||(15395209-15395251)
chr1 (121-178)||(8792969-8793026)
chr1 (123-175)||(1818406-1818458)
chr1 (121-177)||(28504713-28504769)
chr1 (122-175)||(27293283-27293336)
chr1 (121-166)||(38576576-38576621)
chr1 (121-177)||(46410844-46410900)
[»] scaffold0022 (1 HSPs)
scaffold0022 (121-178)||(122561-122618)
[»] scaffold0066 (1 HSPs)
scaffold0066 (123-175)||(11992-12044)
[»] scaffold0340 (1 HSPs)
scaffold0340 (121-175)||(10875-10929)
[»] scaffold0137 (1 HSPs)
scaffold0137 (121-175)||(17102-17156)
[»] scaffold0528 (1 HSPs)
scaffold0528 (121-177)||(1662-1718)


Alignment Details
Target: chr8 (Bit Score: 336; Significance: 0; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 30 - 410
Target Start/End: Original strand, 5840264 - 5840640
Alignment:
Q  30 aaatcatagagtatatgcatgctggcgtctaggtcacatttaagaactgcctttggagaaaataaaggagtgaactatcaatttggttatttctttgtaa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  5840264 aaatcatagagtatatgcatgctggcgtctaggtcacatttaagaactgcctttggagaaaataaaggagtaaactaccaatttggttatgtctttgtaa 5840363  T
Q  130 gttactctcaaattagtctctgattctattaatattttaaaatagtcttgatttgaactgggtaaaggaagtggacgagattgtggaggagatcaaagtc 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  5840364 gttactctcaaattagtctctgattctattaatattttaaaatagtcttaatttgaaccgggtaaagtaagtggacgagattgtggaggaggtcaaagtc 5840463  T
Q  230 ttatcttggcaatgaagtttaattatcaaggttgaggaacgcctcgtgtctctgctatgagtgatgttggaacgccctaaaggagtgtataaggagaggg 329  Q
    ||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5840464 ttatcttggcaatgaagt----ttatcaaggttgaggaacgcctcgtgtctctgctatgagtgatgttggaacgccctaaaggagtgtataaggagaggg 5840559  T
Q  330 taacttatgtgatctttgttcttgaggatggtggtttttgtagtggctttgttttctacttgctgctgcatttttgttttt 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5840560 taacttatgtgatctttgttcttgaggatggtggtttttgtagtggctttgttttctacttgctgctgcatttttgttttt 5840640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 29490376 - 29490428
Alignment:
Q  123 tttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    ||||||||| ||| |||||||||||| ||||| ||||||||||||||||||||    
T  29490376 tttgtaagtcactatcaaattagtctatgattatattaatattttaaaatagt 29490428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 23961733 - 23961665
Alignment:
Q  108 caatttggttatttctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtc 176  Q
    |||||| || || ||||||||||| | | |||||| |||||||||||| |||||||||| |||||||||    
T  23961733 caatttagtcatgtctttgtaagtcattttcaaatcagtctctgattcaattaatatttcaaaatagtc 23961665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 10028655 - 10028710
Alignment:
Q  123 tttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtctt 178  Q
    ||||||||| | ||||||||||||| |||| ||||||||||||| ||| |||||||    
T  10028655 tttgtaagtcattctcaaattagtcactgactctattaatatttcaaattagtctt 10028710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 23768775 - 23768817
Alignment:
Q  135 tctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    |||||||||||||| | ||| ||||||||||||||||||||||    
T  23768775 tctcaaattagtctataattttattaatattttaaaatagtct 23768817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 32029700 - 32029662
Alignment:
Q  137 tcaaattagtctctgattctattaatattttaaaatagt 175  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  32029700 tcaaattagtctctgactctatttatattttaaaatagt 32029662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 41424410 - 41424464
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    ||||||||||| | | |||||| ||||||||| ||||||||||||||||| ||||    
T  41424410 tctttgtaagtaattttcaaatcagtctctgactctattaatattttaaattagt 41424464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 21136603 - 21136644
Alignment:
Q  135 tctcaaattagtctctgattctattaatattttaaaatagtc 176  Q
    |||||||||||||| ||| ||||||||||||| |||||||||    
T  21136603 tctcaaattagtctttgactctattaatatttcaaaatagtc 21136644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 32029411 - 32029464
Alignment:
Q  125 tgtaagttactctcaaattagtctctgattctattaatattttaaaatagtctt 178  Q
    ||||||| | |||||||||| ||||||| ||| ||||||||| |||||||||||    
T  32029411 tgtaagtgattctcaaattaatctctgactctgttaatatttcaaaatagtctt 32029464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 42941193 - 42941237
Alignment:
Q  194 aaggaagtggacgagattgtggaggagatcaaagtcttatcttgg 238  Q
    ||||| ||||| |||||||||||||| |||||||| |||||||||    
T  42941193 aaggatgtggatgagattgtggaggaaatcaaagttttatcttgg 42941237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 305; Significance: 1e-171; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 30 - 375
Target Start/End: Complemental strand, 4941 - 4600
Alignment:
Q  30 aaatcatagagtatatgcatgctggcgtctaggtcacatttaagaactgcctttggagaaaataaaggagtgaactatcaatttggttatttctttgtaa 129  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4941 aaatcatagagtatatgcatgctggcctctaggtcacatttaagaactgcctttggagaaaataaaggagtgaactatcaatttggttatttctttgtaa 4842  T
Q  130 gttactctcaaattagtctctgattctattaatattttaaaatagtcttgatttgaactgggtaaaggaagtggacgagattgtggaggagatcaaagtc 229  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  4841 attattctcaaattagtctctgattctattaatattttaaaatagtcttaatttgaaccgggtaaaggaagtggacgagattgtggaggaggtcaaagtc 4742  T
Q  230 ttatcttggcaatgaagtttaattatcaaggttgaggaacgcctcgtgtctctgctatgagtgatgttggaacgccctaaaggagtgtataaggagaggg 329  Q
    ||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4741 ttatcttggcaatgaagt----ttatcaaggttgaggaacgcctcgtgtctctgctatgagtgatgttggaacgccctaaaggagtgtataaggagaggg 4646  T
Q  330 taacttatgtgatctttgttcttgaggatggtggtttttgtagtgg 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4645 taacttatgtgatctttgttcttgaggatggtggtttttgtagtgg 4600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 9e-46; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 190 - 418
Target Start/End: Complemental strand, 6350192 - 6349978
Alignment:
Q  190 ggtaaaggaagtggacgagattgtggaggagatcaaagtcttatcttggcaatgaagtttaattatcaaggttgaggaacgcctcgtgtctctgctatga 289  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||  |||||    ||||||  ||||||||||| |||||||| ||||||    
T  6350192 ggtaaaggaagtggacaagattgtggaggaggtcaaagtcttatcttggcaatggtgttta----tcaagggagaggaacgccttgtgtctctactatga 6350097  T
Q  290 gtgatgttggaacgccctaaaggagtgtataaggagagggtaacttatgtgatc-tttgttcttgaggatggtggtttttgtagtggctttgttttctac 388  Q
    ||| |||||||||   |||||        |||||||||||||||||| |||  | ||||||||||||||||||||||| ||||||||||| ||||||||     
T  6350096 gtggtgttggaac---ctaaa--------taaggagagggtaacttaggtggccctttgttcttgaggatggtggtttctgtagtggcttagttttctat 6350008  T
Q  389 ttgctgctgcatttttgtttttcttctgcc 418  Q
    |||||||||| ||||||||||||| |||||    
T  6350007 ttgctgctgcttttttgtttttctgctgcc 6349978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 39051105 - 39051162
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtctt 178  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||    
T  39051105 tctttgtaagtcactctcaaattagtcattgattctattaatattttaaaatagtctt 39051162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 44137393 - 44137445
Alignment:
Q  123 tttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    ||||||||| | |||||||||||||||||| ||||||||||||| ||||||||    
T  44137393 tttgtaagtgattctcaaattagtctctgactctattaatatttcaaaatagt 44137445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 55264702 - 55264653
Alignment:
Q  128 aagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    |||| |||||||||||||||||||| ||||||||||||| |||| |||||    
T  55264702 aagtgactctcaaattagtctctgaatctattaatatttcaaaagagtct 55264653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 13302281 - 13302236
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattt 166  Q
    ||||||||||| |||||||||||||||   ||||||||||||||||    
T  13302281 tctttgtaagtcactctcaaattagtcctcgattctattaatattt 13302236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 13432688 - 13432733
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattt 166  Q
    ||||||||||| |||||||||||||||   ||||||||||||||||    
T  13432688 tctttgtaagtaactctcaaattagtcctcgattctattaatattt 13432733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 13432830 - 13432781
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaa 170  Q
    ||||||||||| | |||||||||||||| || ||||||||| ||||||||    
T  13432830 tctttgtaagtcattctcaaattagtctatgcttctattaacattttaaa 13432781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 3692058 - 3692106
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaa 169  Q
    |||||||||  |||||| |||||||||| | ||||||||||||||||||    
T  3692058 tctttgtaaactactcttaaattagtctatcattctattaatattttaa 3692106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 5162836 - 5162892
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    ||||| ||||| | |||||||||||||||| | ||||||||||||| ||| ||||||    
T  5162836 tctttataagtcaatctcaaattagtctctaactctattaatatttcaaattagtct 5162892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 40942598 - 40942638
Alignment:
Q  136 ctcaaattagtctctgattctattaatattttaaaatagtc 176  Q
    ||||||||||| ||||||| ||||||||||||||| |||||    
T  40942598 ctcaaattagtgtctgattttattaatattttaaactagtc 40942638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 21969385 - 21969298
Alignment:
Q  88 aaaataaaggagtgaactatcaatttggttatt-tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatag 174  Q
    ||||||||||||| |||||| || ||||| ||| ||||||||||| | |||||||||||||||||| || ||||||||||||||||||    
T  21969385 aaaataaaggagtaaactataaaattggtcattatctttgtaagtgaatctcaaattagtctctgactcaattaatattttaaaatag 21969298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 8446943 - 8447000
Alignment:
Q  119 tttctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtc 176  Q
    ||||||| ||||| | | ||||||||||| |||||||||||||||||| |||||||||    
T  8446943 tttctttataagtgattttcaaattagtcactgattctattaatatttcaaaatagtc 8447000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 8455747 - 8455804
Alignment:
Q  119 tttctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtc 176  Q
    ||||||| ||||| | | ||||||||||| |||||||||||||||||| |||||||||    
T  8455747 tttctttataagtgattttcaaattagtcactgattctattaatatttcaaaatagtc 8455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 21394256 - 21394312
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    ||||||||||  |||||||||||||||  | | ||||||||||||||||||||||||    
T  21394256 tctttgtaagccactctcaaattagtcattaactctattaatattttaaaatagtct 21394312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 3960929 - 3960874
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtc 176  Q
    ||||||||||||| | ||||| |||||| ||| ||||||||||||||||| |||||    
T  3960929 tctttgtaagttattatcaaactagtctatgactctattaatattttaaattagtc 3960874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 19122062 - 19122008
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    ||||||||||| ||| |||||||||||| ||| ||||||||||||| ||| ||||    
T  19122062 tctttgtaagtcactttcaaattagtctatgactctattaatatttcaaactagt 19122008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 9530549 - 9530605
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    ||||||||||| | |||||||||||||||| | | ||||||||||| ||| ||||||    
T  9530549 tctttgtaagtcattctcaaattagtctctaactttattaatatttcaaactagtct 9530605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 26330391 - 26330339
Alignment:
Q  123 tttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    ||||||||| | | |||||||||||  ||| ||||||||||||||||||||||    
T  26330391 tttgtaagtgattatcaaattagtcattgactctattaatattttaaaatagt 26330339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 22191590 - 22191535
Alignment:
Q  122 ctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||    
T  22191590 ctttgtaagtcactctcaaattagtccctgactctattaatattttaaaatagtct 22191535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 17184753 - 17184834
Alignment:
Q  97 gagtgaactatcaatttggtt-atttctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    |||| ||||||||| |||||| || |||||||||| || | ||||| |||||||||| ||||||||||||||||| ||||||    
T  17184753 gagtaaactatcaaattggttcatgtctttgtaagctattatcaaactagtctctgactctattaatattttaaactagtct 17184834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 17672952 - 17673003
Alignment:
Q  127 taagttactctcaaattagtctctgattctattaatattttaaaatagtctt 178  Q
    ||||| |||||||||||||||||  ||||||||||||||| |||||||||||    
T  17672952 taagtcactctcaaattagtctccaattctattaatatttcaaaatagtctt 17673003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 32014053 - 32014000
Alignment:
Q  123 tttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtc 176  Q
    ||||||||| | |||||||||||||| ||| |||||| |||||| |||||||||    
T  32014053 tttgtaagtgattctcaaattagtctatgactctattgatatttcaaaatagtc 32014000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 6511035 - 6511075
Alignment:
Q  137 tcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    |||||||||||| ||||||| ||||||||| ||||||||||    
T  6511035 tcaaattagtctatgattctgttaatatttcaaaatagtct 6511075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 39840661 - 39840716
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtc 176  Q
    ||||||||||| | |||||||||||||||||| ||||||||||||| |||||||||    
T  39840661 tctttgtaagtgattctcaaattagtctctgactctattaatatttcaaaatagtc 39840716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 40472832 - 40472886
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||    
T  40472832 tctttgtaagttactctcaaattagtctttgactctattaaaattttaaactagt 40472886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 55447259 - 55447203
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    ||||||||||| | |||||||| ||||||||| ||| ||||||||||||||||||||    
T  55447259 tctttgtaagtgattctcaaatcagtctctgactctcttaatattttaaaatagtct 55447203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 45965675 - 45965730
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtc 176  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||| || ||||||    
T  45965675 tctttgtaagtcgctctcaaattaatctctgattctattaatatttcaatatagtc 45965730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 34763186 - 34763141
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattt 166  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||    
T  34763186 tctttgtaagttgttctcaaattaatctctgattctattaatattt 34763141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 3910237 - 3910287
Alignment:
Q  125 tgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    |||||| |||||||||||||||| || | ||||||||||||||||| ||||    
T  3910237 tgtaagctactctcaaattagtccctaactctattaatattttaaactagt 3910287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 27812207 - 27812261
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    ||||||||||| | ||| |||||||||||||| ||||||||||||| ||| ||||    
T  27812207 tctttgtaagtcattcttaaattagtctctgagtctattaatatttcaaattagt 27812261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 48338627 - 48338573
Alignment:
Q  123 tttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    ||||||||| | | |||||||||||||||| ||||||||||| | ||||||||||    
T  48338627 tttgtaagtgattatcaaattagtctctgactctattaatatatcaaaatagtct 48338573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 40861028 - 40860971
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtctt 178  Q
    ||||||||||| | ||| || ||||||||||||| ||||||||||| ||| |||||||    
T  40861028 tctttgtaagtcattcttaatttagtctctgattttattaatatttcaaattagtctt 40860971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 51862731 - 51862691
Alignment:
Q  137 tcaaattagtctctgattctattaatattttaaaatagtctt 178  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  51862731 tcaaattagtc-ctgactctattaatattttaaaatagtctt 51862691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 45965879 - 45965827
Alignment:
Q  123 tttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    ||||||||| |||||||||||||| | ||| ||||||||||||| ||| ||||    
T  45965879 tttgtaagtcactctcaaattagtttgtgactctattaatatttcaaactagt 45965827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 30935440 - 30935371
Alignment:
Q  97 gagtgaactatcaatttggttatttctttgtaagttactctcaaattagtctctgattctattaatattt 166  Q
    |||| ||||||||| |||||| | ||||||||||| ||||||||||||||||| || | |||||||||||    
T  30935440 gagtaaactatcaaattggttctctctttgtaagtcactctcaaattagtctccgactttattaatattt 30935371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 42709919 - 42709974
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtc 176  Q
    ||||||||||| | |||||||| |||||| || |||||||||||||||||||||||    
T  42709919 tctttgtaagtgattctcaaatcagtctccgactctattaatattttaaaatagtc 42709974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 41008997 - 41008943
Alignment:
Q  123 tttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    ||||||||| | | |||||||| ||||||| ||||||||||||||||||||||||    
T  41008997 tttgtaagtcattttcaaattaatctctgactctattaatattttaaaatagtct 41008943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 41008801 - 41008850
Alignment:
Q  126 gtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    |||||| | ||||||| |||||| ||||||||||||||||||||||||||    
T  41008801 gtaagtcattctcaaactagtctgtgattctattaatattttaaaatagt 41008850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 26752080 - 26752035
Alignment:
Q  133 actctcaaattagtctctgattctattaatattttaaaatagtctt 178  Q
    |||||||||||||||||||| | | ||| |||||||||||||||||    
T  26752080 actctcaaattagtctctgactttgttattattttaaaatagtctt 26752035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 43669540 - 43669486
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    ||||||||||  ||| ||||||||||||  || ||||||||||||||||||||||||    
T  43669540 tctttgtaagccactttcaaattagtct--gactctattaatattttaaaatagtct 43669486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 16830294 - 16830338
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatatt 165  Q
    ||||||||||| |||||||||||||| ||  ||||||||||||||    
T  16830294 tctttgtaagtcactctcaaattagtgtcaaattctattaatatt 16830338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 6295 - 6243
Alignment:
Q  123 tttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||    
T  6295 tttgtaagttattctcaaattagtctttgactctattaatatttcaaaatagt 6243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 39643020 - 39643071
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaat 172  Q
    ||||||||||||||||| |||||||| | ||| |||||||||||||||||||    
T  39643020 tctttgtaagttactctaaaattagtttatgactctattaatattttaaaat 39643071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 31046218 - 31046162
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    ||||||||||| | ||||||||||  ||| || ||||||||||||||||||||||||    
T  31046218 tctttgtaagtgattctcaaattatcctccgactctattaatattttaaaatagtct 31046162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 36184830 - 36184758
Alignment:
Q  105 tatcaatttggttatt-tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtc 176  Q
    ||||||||||||  || ||||||||| | |||||||||||||||||| | ||||||| ||||| |||||||||    
T  36184830 tatcaatttggtatttgtctttgtaaatcactctcaaattagtctctaactctattagtatttcaaaatagtc 36184758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 8285301 - 8285259
Alignment:
Q  135 tctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    ||||||||||||| |||| | ||||||||||||||||||||||    
T  8285301 tctcaaattagtccctgactatattaatattttaaaatagtct 8285259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 11275865 - 11275811
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    ||||||||| | | |||||||||||||||||| | ||||||||||||||| ||||    
T  11275865 tctttgtaaatcattctcaaattagtctctgactttattaatattttaaattagt 11275811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 12640288 - 12640232
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtctt 178  Q
    ||||||||||| | ||||||||||||| |||| |||||||||| || |||||||||||    
T  12640288 tctttgtaagtgattctcaaattagtcactgaatctattaata-ttcaaaatagtctt 12640232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 166
Target Start/End: Original strand, 39174627 - 39174668
Alignment:
Q  125 tgtaagttactctcaaattagtctctgattctattaatattt 166  Q
    ||||||||||| ||||||| |||||||| |||||||||||||    
T  39174627 tgtaagttactttcaaattcgtctctgactctattaatattt 39174668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 31051279 - 31051223
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    ||||||||||| | ||||||||||| | | || |||| |||||||||||||||||||    
T  31051279 tctttgtaagtgattctcaaattagcccccgactctactaatattttaaaatagtct 31051223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 31066159 - 31066103
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    ||||||||||| | ||| ||||||| | | || ||||||||||||||||||||||||    
T  31066159 tctttgtaagtgattcttaaattagcccccgactctattaatattttaaaatagtct 31066103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 38783894 - 38783949
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtc 176  Q
    ||||||||||| ||| |||||||||||  ||| |||||||||||||||||||||||    
T  38783894 tctttgtaagtcactttcaaattagtccatgactctattaatattttaaaatagtc 38783949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 15395209 - 15395251
Alignment:
Q  135 tctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    |||||||||||||| ||| ||||||||||||||||||||||||    
T  15395209 tctcaaattagtctatgactctattaatattttaaaatagtct 15395251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 8792969 - 8793026
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtctt 178  Q
    ||||||||||| |||||||||||||||||  | ||||||||||||| |||||| ||||    
T  8792969 tctttgtaagtcactctcaaattagtctccaactctattaatatttcaaaataatctt 8793026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 1818458 - 1818406
Alignment:
Q  123 tttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    ||||||||| | |||||||||| | ||||| ||||||||||||||||||||||    
T  1818458 tttgtaagtgattctcaaattaatatctgactctattaatattttaaaatagt 1818406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 28504713 - 28504769
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    ||||||||||| | |||||||||||||| ||| ||||||||||||| ||| ||||||    
T  28504713 tctttgtaagtcattctcaaattagtctatgactctattaatatttcaaactagtct 28504769  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 27293283 - 27293336
Alignment:
Q  122 ctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    |||||||| | | |||||||||||||||||| ||||||||||||| ||| ||||    
T  27293283 ctttgtaaatcattctcaaattagtctctgactctattaatatttcaaattagt 27293336  T

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Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 38576576 - 38576621
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattt 166  Q
    ||||||||| | | |||||||||||||| |||||||||||||||||    
T  38576576 tctttgtaaatcattctcaaattagtctttgattctattaatattt 38576621  T

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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 46410900 - 46410844
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    ||||||||||| | |||||| ||||||| ||| |||| |||||||| ||||||||||    
T  46410900 tctttgtaagtgattctcaatttagtctatgactctaataatatttcaaaatagtct 46410844  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 122618 - 122561
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtctt 178  Q
    ||||||||||  | |||||||||||||||||| ||||||||||||| ||| |||||||    
T  122618 tctttgtaagaaattctcaaattagtctctgactctattaatatttcaaactagtctt 122561  T

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Target: scaffold0066 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 11992 - 12044
Alignment:
Q  123 tttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    ||||||||||||||||||||| || | | ||| ||||||||||||||||||||    
T  11992 tttgtaagttactctcaaatttgtttttaattttattaatattttaaaatagt 12044  T

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Target: scaffold0340 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 10875 - 10929
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    ||||| ||||| | |||| ||||||||| ||||| ||||||||||||||||||||    
T  10875 tctttttaagtgattctctaattagtctatgattttattaatattttaaaatagt 10929  T

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Target: scaffold0137 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 17102 - 17156
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 175  Q
    |||||||||| |||||||||||||||| |  | ||||||||||||||||| ||||    
T  17102 tctttgtaagatactctcaaattagtcccaaactctattaatattttaaactagt 17156  T

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Target: scaffold0528 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 1662 - 1718
Alignment:
Q  121 tctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagtct 177  Q
    ||||||||||| | ||||||||||| | | || |||| |||||||||||||||||||    
T  1662 tctttgtaagtgattctcaaattagcccccgactctactaatattttaaaatagtct 1718  T

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