View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11271_high_36 (Length: 265)
Name: NF11271_high_36
Description: NF11271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11271_high_36 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 36930387 - 36930651
Alignment:
| Q |
1 |
aataatccatgggaccctccaggtgaaggcactcatgttggcttgaatttcaactctatgaggtctaacataactaagccatggttgacaaatattcaag |
100 |
Q |
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| T |
36930387 |
aataatccatgggaccctccaggtgaaggcactcatgttggcttgaatttcaactctatgaggtctaacataactaagccatggttgacaaatattcaag |
36930486 |
T |
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| Q |
101 |
aacggagagtttacaattgtagcattgagtacaaatcaagcactctaaatttgagtgtttcattcaccatgtnnnnnnnnnnnnnnnnnaaaccatttga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
36930487 |
aacggagagtttacaattgtagcattgagtacaaatcaagcactctaaatttgagtgtttcattcaccatgtatgatgatgatgatgataaaccatttga |
36930586 |
T |
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| Q |
201 |
agagtacatatcacacaaggttgatttgagagatgtcttaccagagagggttattgttggcttct |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36930587 |
agagtacatatcacacaaggttgatttgagagatgtcttaccagagagggttattgttggcttct |
36930651 |
T |
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