View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11271_low_15 (Length: 500)

Name: NF11271_low_15
Description: NF11271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11271_low_15
NF11271_low_15
[»] chr3 (54 HSPs)
chr3 (20-338)||(20622796-20623114)
chr3 (398-487)||(46589871-46589962)
chr3 (398-470)||(4179229-4179301)
chr3 (398-487)||(4172902-4172992)
chr3 (398-483)||(30694659-30694745)
chr3 (317-383)||(9625034-9625100)
chr3 (299-383)||(24559422-24559506)
chr3 (317-383)||(10959184-10959250)
chr3 (317-383)||(27183659-27183725)
chr3 (398-466)||(45731511-45731579)
chr3 (317-380)||(42823966-42824029)
chr3 (317-380)||(14868736-14868799)
chr3 (298-383)||(36331704-36331789)
chr3 (317-383)||(52030172-52030238)
chr3 (318-383)||(36476411-36476476)
chr3 (322-383)||(985895-985958)
chr3 (335-383)||(7448341-7448389)
chr3 (335-383)||(7456483-7456531)
chr3 (320-373)||(24136738-24136793)
chr3 (298-383)||(4478344-4478431)
chr3 (298-380)||(35483301-35483383)
chr3 (298-372)||(49146116-49146190)
chr3 (317-383)||(3784121-3784187)
chr3 (337-383)||(38555006-38555052)
chr3 (290-364)||(50676864-50676938)
chr3 (317-370)||(28226178-28226231)
chr3 (326-383)||(44671529-44671586)
chr3 (298-381)||(13874814-13874897)
chr3 (314-382)||(35140767-35140835)
chr3 (317-378)||(41460331-41460394)
chr3 (300-383)||(43774219-43774302)
chr3 (301-364)||(31202942-31203004)
chr3 (335-382)||(32453502-32453549)
chr3 (317-383)||(33206808-33206874)
chr3 (335-373)||(45118712-45118751)
chr3 (317-383)||(46328902-46328968)
chr3 (317-364)||(49429511-49429558)
chr3 (317-364)||(50271780-50271827)
chr3 (317-364)||(50381765-50381812)
chr3 (317-382)||(3955359-3955424)
chr3 (298-383)||(13539942-13540027)
chr3 (314-364)||(22602200-22602250)
chr3 (298-383)||(32508772-32508857)
chr3 (317-363)||(45431678-45431724)
chr3 (298-383)||(49639060-49639145)
chr3 (297-350)||(20221465-20221518)
chr3 (298-362)||(21420187-21420252)
chr3 (313-362)||(23651069-23651118)
chr3 (317-383)||(29645803-29645871)
chr3 (317-383)||(31435477-31435545)
chr3 (326-383)||(36763491-36763551)
chr3 (315-347)||(17262268-17262300)
chr3 (277-329)||(35492804-35492856)
chr3 (296-364)||(43897632-43897700)
[»] chr2 (28 HSPs)
chr2 (398-487)||(9795557-9795646)
chr2 (317-383)||(34034401-34034467)
chr2 (317-383)||(43871004-43871070)
chr2 (298-383)||(2304322-2304407)
chr2 (317-373)||(29035027-29035083)
chr2 (298-383)||(44187736-44187821)
chr2 (300-383)||(11133110-11133193)
chr2 (316-369)||(13019274-13019327)
chr2 (298-373)||(8234780-8234855)
chr2 (298-366)||(21970434-21970502)
chr2 (300-383)||(29664637-29664720)
chr2 (317-365)||(32527073-32527121)
chr2 (398-469)||(35917847-35917918)
chr2 (298-383)||(3179356-3179441)
chr2 (298-383)||(16028086-16028171)
chr2 (314-383)||(30474173-30474242)
chr2 (298-372)||(36106853-36106926)
chr2 (315-380)||(41535238-41535303)
chr2 (298-382)||(2114414-2114498)
chr2 (300-353)||(14307702-14307755)
chr2 (318-382)||(17115523-17115587)
chr2 (298-347)||(20533789-20533838)
chr2 (298-347)||(36520794-36520843)
chr2 (315-364)||(43684327-43684376)
chr2 (317-380)||(1244620-1244685)
chr2 (298-373)||(11837021-11837096)
chr2 (317-369)||(23403357-23403409)
chr2 (318-383)||(42678300-42678367)
[»] chr1 (39 HSPs)
chr1 (402-487)||(27024278-27024364)
chr1 (317-383)||(13870059-13870125)
chr1 (317-383)||(25819236-25819302)
chr1 (300-373)||(17954847-17954920)
chr1 (318-383)||(47763363-47763428)
chr1 (317-373)||(17350112-17350168)
chr1 (298-373)||(29491502-29491576)
chr1 (314-373)||(39238764-39238823)
chr1 (317-383)||(40678874-40678940)
chr1 (317-382)||(52833085-52833150)
chr1 (317-373)||(19976540-19976596)
chr1 (298-383)||(49916472-49916557)
chr1 (317-373)||(32635191-32635248)
chr1 (20-64)||(18439629-18439673)
chr1 (20-64)||(18450487-18450531)
chr1 (298-372)||(15774301-15774375)
chr1 (297-364)||(19424077-19424144)
chr1 (317-372)||(35111700-35111755)
chr1 (318-373)||(23368718-23368775)
chr1 (300-373)||(39994836-39994909)
chr1 (318-367)||(38021304-38021353)
chr1 (327-383)||(29106846-29106902)
chr1 (265-332)||(9413797-9413864)
chr1 (317-383)||(12553245-12553313)
chr1 (317-383)||(15368856-15368922)
chr1 (317-364)||(42946464-42946511)
chr1 (298-383)||(11213427-11213512)
chr1 (336-374)||(12675730-12675768)
chr1 (298-382)||(4616905-4616989)
chr1 (317-383)||(7438672-7438740)
chr1 (300-372)||(11405490-11405562)
chr1 (303-364)||(25800330-25800391)
chr1 (317-373)||(32660881-32660938)
chr1 (343-383)||(2044942-2044982)
chr1 (298-346)||(11238043-11238091)
chr1 (338-370)||(19516479-19516511)
chr1 (336-372)||(27321299-27321335)
chr1 (317-369)||(32585399-32585451)
chr1 (316-383)||(34560316-34560383)
[»] chr6 (20 HSPs)
chr6 (398-470)||(15107735-15107807)
chr6 (277-382)||(29284128-29284234)
chr6 (398-487)||(19403302-19403392)
chr6 (317-373)||(33628929-33628985)
chr6 (317-383)||(14981680-14981746)
chr6 (318-382)||(24470370-24470434)
chr6 (317-383)||(9064917-9064983)
chr6 (298-371)||(6143997-6144069)
chr6 (317-383)||(22389728-22389794)
chr6 (317-373)||(6658531-6658587)
chr6 (317-383)||(25020506-25020572)
chr6 (298-383)||(10377102-10377187)
chr6 (318-383)||(12089149-12089214)
chr6 (277-372)||(20568244-20568341)
chr6 (298-383)||(30566090-30566175)
chr6 (330-363)||(7927068-7927101)
chr6 (298-347)||(10424549-10424598)
chr6 (326-383)||(11636746-11636803)
chr6 (319-383)||(12127887-12127951)
chr6 (331-363)||(7929072-7929104)
[»] chr7 (31 HSPs)
chr7 (398-470)||(37381528-37381600)
chr7 (398-470)||(48260746-48260818)
chr7 (317-380)||(31475821-31475884)
chr7 (298-373)||(41139119-41139194)
chr7 (317-364)||(3961405-3961452)
chr7 (317-364)||(28914874-28914921)
chr7 (317-383)||(38451914-38451980)
chr7 (315-365)||(19126786-19126836)
chr7 (318-383)||(24396997-24397062)
chr7 (317-374)||(21461637-21461696)
chr7 (292-364)||(40011738-40011810)
chr7 (299-383)||(41417253-41417337)
chr7 (314-383)||(34948154-34948223)
chr7 (299-353)||(41000793-41000847)
chr7 (298-371)||(14818355-14818428)
chr7 (298-371)||(15265353-15265426)
chr7 (318-381)||(35890870-35890933)
chr7 (317-364)||(3889797-3889844)
chr7 (317-364)||(5228121-5228168)
chr7 (318-364)||(20013633-20013679)
chr7 (298-372)||(24304272-24304346)
chr7 (403-469)||(42694751-42694817)
chr7 (317-373)||(21285341-21285397)
chr7 (317-373)||(29658260-29658316)
chr7 (252-333)||(31191600-31191681)
chr7 (317-350)||(47880197-47880230)
chr7 (317-383)||(4590589-4590657)
chr7 (318-383)||(23602326-23602393)
chr7 (313-364)||(27454058-27454110)
chr7 (273-341)||(28735218-28735286)
chr7 (318-362)||(36528218-36528262)
[»] scaffold1619 (1 HSPs)
scaffold1619 (409-487)||(670-749)
[»] chr5 (30 HSPs)
chr5 (298-383)||(20735153-20735238)
chr5 (398-470)||(11140981-11141053)
chr5 (317-383)||(18303056-18303122)
chr5 (298-383)||(4674793-4674878)
chr5 (317-372)||(25346235-25346290)
chr5 (317-383)||(1463922-1463988)
chr5 (298-365)||(36045130-36045197)
chr5 (317-372)||(38230194-38230249)
chr5 (297-373)||(18175238-18175316)
chr5 (317-383)||(6671764-6671830)
chr5 (317-383)||(20945869-20945935)
chr5 (317-383)||(6447458-6447524)
chr5 (298-383)||(37303966-37304050)
chr5 (317-353)||(33599960-33599996)
chr5 (317-373)||(37417118-37417173)
chr5 (317-383)||(1244705-1244771)
chr5 (297-364)||(34729503-34729569)
chr5 (314-361)||(35168632-35168679)
chr5 (317-382)||(10943767-10943832)
chr5 (318-383)||(29096286-29096351)
chr5 (317-377)||(8015886-8015946)
chr5 (319-373)||(17077414-17077470)
chr5 (298-383)||(18872553-18872636)
chr5 (298-383)||(30733152-30733237)
chr5 (330-382)||(34921093-34921145)
chr5 (317-374)||(1572161-1572220)
chr5 (313-378)||(1984170-1984237)
chr5 (298-373)||(7234860-7234935)
chr5 (272-308)||(14574289-14574325)
chr5 (298-373)||(37986853-37986930)
[»] scaffold0105 (1 HSPs)
scaffold0105 (398-487)||(18642-18732)
[»] chr4 (44 HSPs)
chr4 (398-487)||(8192067-8192157)
chr4 (298-383)||(8690246-8690331)
chr4 (298-383)||(15640421-15640506)
chr4 (398-470)||(54421030-54421102)
chr4 (317-383)||(9693013-9693079)
chr4 (317-383)||(14149844-14149910)
chr4 (317-383)||(28520709-28520775)
chr4 (317-383)||(48968188-48968254)
chr4 (314-379)||(46799455-46799520)
chr4 (317-383)||(53815747-53815813)
chr4 (298-383)||(36954169-36954254)
chr4 (285-364)||(37889603-37889682)
chr4 (317-372)||(52031258-52031313)
chr4 (317-383)||(27296873-27296939)
chr4 (317-383)||(40150524-40150590)
chr4 (299-373)||(42411441-42411516)
chr4 (315-371)||(34773673-34773729)
chr4 (298-366)||(7768783-7768851)
chr4 (317-373)||(11128771-11128827)
chr4 (297-353)||(39494195-39494251)
chr4 (339-383)||(46799569-46799613)
chr4 (318-380)||(3465635-3465697)
chr4 (298-372)||(6330925-6330999)
chr4 (298-353)||(11872905-11872960)
chr4 (317-383)||(20610790-20610858)
chr4 (317-364)||(22525439-22525486)
chr4 (298-380)||(33536257-33536339)
chr4 (297-364)||(38690697-38690764)
chr4 (317-372)||(52330898-52330953)
chr4 (317-383)||(54304907-54304973)
chr4 (330-372)||(5909772-5909814)
chr4 (298-383)||(13073133-13073217)
chr4 (298-383)||(20753103-20753188)
chr4 (314-364)||(22096388-22096438)
chr4 (318-383)||(55656086-55656151)
chr4 (319-383)||(31578070-31578134)
chr4 (317-373)||(36257745-36257801)
chr4 (318-362)||(44074905-44074950)
chr4 (328-372)||(46206650-46206695)
chr4 (264-333)||(51298690-51298759)
chr4 (317-365)||(9759422-9759470)
chr4 (315-347)||(12868041-12868073)
chr4 (298-346)||(43336993-43337041)
chr4 (335-383)||(48501636-48501684)
[»] scaffold0809 (1 HSPs)
scaffold0809 (317-373)||(4794-4850)
[»] scaffold0057 (1 HSPs)
scaffold0057 (398-465)||(60656-60723)
[»] chr8 (38 HSPs)
chr8 (317-383)||(2800070-2800136)
chr8 (298-383)||(35301141-35301226)
chr8 (319-383)||(10292405-10292469)
chr8 (317-383)||(31129353-31129419)
chr8 (317-383)||(35253802-35253867)
chr8 (322-383)||(10310338-10310399)
chr8 (317-373)||(43508436-43508492)
chr8 (317-372)||(1588818-1588873)
chr8 (314-373)||(7314781-7314840)
chr8 (317-383)||(2696584-2696650)
chr8 (318-383)||(36359696-36359761)
chr8 (317-383)||(38790550-38790616)
chr8 (313-383)||(42762010-42762078)
chr8 (317-383)||(14683927-14683993)
chr8 (297-364)||(19957318-19957385)
chr8 (298-380)||(34073220-34073302)
chr8 (398-469)||(40147455-40147526)
chr8 (298-383)||(31373352-31373437)
chr8 (298-383)||(18009693-18009778)
chr8 (298-383)||(22426433-22426518)
chr8 (317-373)||(39165031-39165088)
chr8 (400-487)||(14139435-14139523)
chr8 (298-361)||(41125432-41125496)
chr8 (317-383)||(4798519-4798585)
chr8 (298-372)||(5323954-5324028)
chr8 (318-364)||(32822167-32822213)
chr8 (298-383)||(33524428-33524513)
chr8 (300-373)||(43468693-43468766)
chr8 (303-364)||(39172210-39172271)
chr8 (300-383)||(220338-220423)
chr8 (300-383)||(689493-689578)
chr8 (300-383)||(733961-734046)
chr8 (300-383)||(857857-857942)
chr8 (434-481)||(12619869-12619917)
chr8 (298-346)||(12926493-12926541)
chr8 (300-383)||(23239158-23239241)
chr8 (318-378)||(33155333-33155392)
chr8 (308-364)||(33820392-33820448)
[»] scaffold0308 (1 HSPs)
scaffold0308 (317-383)||(7127-7193)
[»] scaffold0740 (1 HSPs)
scaffold0740 (398-469)||(2749-2820)
[»] scaffold0227 (1 HSPs)
scaffold0227 (317-383)||(21901-21965)
[»] scaffold0054 (1 HSPs)
scaffold0054 (292-362)||(22485-22555)
[»] scaffold1990 (1 HSPs)
scaffold1990 (317-383)||(945-1011)
[»] scaffold0178 (1 HSPs)
scaffold0178 (298-380)||(4355-4437)
[»] scaffold0092 (1 HSPs)
scaffold0092 (317-383)||(47295-47361)
[»] scaffold1086 (1 HSPs)
scaffold1086 (298-383)||(2520-2605)
[»] scaffold0112 (1 HSPs)
scaffold0112 (317-379)||(17913-17975)
[»] scaffold0111 (1 HSPs)
scaffold0111 (290-367)||(37361-37438)
[»] scaffold0102 (1 HSPs)
scaffold0102 (338-383)||(31233-31277)
[»] scaffold0005 (1 HSPs)
scaffold0005 (317-350)||(270749-270782)


Alignment Details
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 338
Target Start/End: Complemental strand, 20623114 - 20622796
Alignment:
Q  20 gatcctacaagcaattaatttaaaactaatgcttgtttaccaaaaagaatggtaaacatagtgtaaattagtttttcattgacactcaataagaatggaa 119  Q
    |||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  20623114 gatcctacaaacaattaatttaaaactaatgtttgtttaccaaaaacaatggtaaacagagtgtaaattagtttttcattgacactcaacaagaatggaa 20623015  T
Q  120 tatttggtagttatttcttaaagaaaattacaaaatagacttatatgtatgaaaagatgataagttcttattagacaagggtgtaatttttcaccttcaa 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20623014 tatttggtagttatttcttaaagaaaattacaaaatagacttatatgtatgaaaagatgataagttcttattagacaagggtgtaatttttcaccttcaa 20622915  T
Q  220 tttatagtcattcgcctcatgattaaatacttatatataaattcccgtgaatttaattcagttggtaagtacaatatatattatatgtagagttcgaggt 319  Q
    || |||||||||||||||||||||||||||||||||||||||  || ||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  20622914 ttcatagtcattcgcctcatgattaaatacttatatataaatctccatgagtttaactcagttggtaagtacaatatatattatatgtagaattcgaggt 20622815  T
Q  320 tcgaatcccggacatccca 338  Q
    ||||| |||||||||||||    
T  20622814 tcgaaccccggacatccca 20622796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 398 - 487
Target Start/End: Complemental strand, 46589962 - 46589871
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcact--ttttctataattttgtcggcct 487  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||  |||||| ||| |||||||||||    
T  46589962 gttgcatctttaaaattgtagataatttgactgatctagatgataattttattattagaaacttcactttttttctgtaaatttgtcggcct 46589871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 398 - 470
Target Start/End: Original strand, 4179229 - 4179301
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcactttttc 470  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  4179229 gttgtatctttaaaattgtagataatttgactgatccagatgataattttatcattagaaacttcactttttc 4179301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 398 - 487
Target Start/End: Original strand, 4172902 - 4172992
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcacttttt-ctataattttgtcggcct 487  Q
    |||| ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| || |||||||| ||||||    
T  4172902 gttgtatctttaaaattgtagataatttgactgattcagatgataattttatcattagaaacttcactttttcctttaattttgccggcct 4172992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 398 - 483
Target Start/End: Complemental strand, 30694745 - 30694659
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcactttt-tctataattttgtcg 483  Q
    |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||  |||| ||| |||||||||||    
T  30694745 gttgcatctttaaaattggagataatttgattgatctagatgataattttatcattagaaacttcgtttttctctgtaattttgtcg 30694659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 9625034 - 9625100
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  9625034 ggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagccactagactacctgac 9625100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 299 - 383
Target Start/End: Original strand, 24559422 - 24559506
Alignment:
Q  299 attatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| || | ||| |||||||| |||||||| ||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  24559422 attatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaagtgaatttctaaccactaggttacctgac 24559506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 10959184 - 10959250
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  10959184 ggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagtcactagactacctgac 10959250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 27183725 - 27183659
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  27183725 ggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 27183659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 398 - 466
Target Start/End: Complemental strand, 45731579 - 45731511
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcactt 466  Q
    ||||||||||||||||||| |||||||||||||||  | |||||||||| || ||||||||||||||||    
T  45731579 gttgcatctttaaaattgttgataatttgactaattcaaatgataatttaattattagaaacttcactt 45731511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 42824029 - 42823966
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacct 380  Q
    |||||||||| |||||| || |||||||||||||||| |||||||||||||||||||| |||||    
T  42824029 ggttcgaatctcggacaccctacttattcactttaaaagtgaatttctagccactagactacct 42823966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 380
Target Start/End: Original strand, 14868736 - 14868799
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacct 380  Q
    |||||||| |||| ||| ||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  14868736 ggttcgaaccccgaacaccccacttattcactttaaaagtgaaattctagccactaggttacct 14868799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 36331789 - 36331704
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttt-aaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| || | ||| |||||||| |||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||||||    
T  36331789 tattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaaagtgaa-ttctagccactagactacctgac 36331704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 52030172 - 52030238
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| || |||||||||||||||| |||||||| ||||||||||  ||||||||    
T  52030172 ggttcgaaccccggacaccctacttattcactttaaaagtgaatttttagccactaggctacctgac 52030238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 36476411 - 36476476
Alignment:
Q  318 gttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||| |||| ||| ||||||||||||||||||| ||||||| |||||||||||  ||||||||    
T  36476411 gttcgaaccccgaacaccccacttattcactttaaaagtgaattcctagccactaggctacctgac 36476476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 383
Target Start/End: Complemental strand, 985958 - 985895
Alignment:
Q  322 gaatcccggacatcccacttattcactttaaaggtgaatt--tctagccactagattacctgac 383  Q
    |||||||||||| ||||||||||||  |||||||||||||  ||||||||||||||||| ||||    
T  985958 gaatcccggacaccccacttattcatcttaaaggtgaatttctctagccactagattacttgac 985895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 383
Target Start/End: Complemental strand, 7448389 - 7448341
Alignment:
Q  335 cccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  7448389 cccacttattcacttcaaaagtgaatttctagccactagactacctgac 7448341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 383
Target Start/End: Complemental strand, 7456531 - 7456483
Alignment:
Q  335 cccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  7456531 cccacttattcacttcaaaagtgaatttctagccactagactacctgac 7456483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 373
Target Start/End: Complemental strand, 24136793 - 24136738
Alignment:
Q  320 tcgaatcccggacatcccacttattcacttt--aaaggtgaatttctagccactag 373  Q
    ||||| |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  24136793 tcgaaccccggacaccccacttattcactttaaaaaggtgaatttctagccactag 24136738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 4478431 - 4478344
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattca-ctttaaaggtg-aatttctagccactagattacctgac 383  Q
    ||||||||| || | ||| |||||||||||||||||||||||||||||| |||||||  || || || ||||||||||| ||||||||    
T  4478431 tattatatgcaggggtcggggttcgaatcccggacatcccacttattcatctttaaaaatgtaaattttagccactagactacctgac 4478344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 380
Target Start/End: Original strand, 35483301 - 35483383
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacct 380  Q
    ||||||||| || | ||| ||||||||||||||||| ||||||||||||| ||| ||||| || |||||||||||||| |||||    
T  35483301 tattatatgcaggggtcggggttcgaatcccggacaccccacttattcaccttataaggt-aaattctagccactagactacct 35483383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 372
Target Start/End: Original strand, 49146116 - 49146190
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccacta 372  Q
    ||||||||| || | ||| |||||||| |||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  49146116 tattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttataaggtgaa-ttctagccacta 49146190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 3784121 - 3784187
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||| | |||| |||||| |||||||||||||||||| | ||||||||    
T  3784121 ggttcgaaccccggacaccccaccttttcattttaaaagtgaatttctagccactaaactacctgac 3784187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 38555052 - 38555006
Alignment:
Q  337 cacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  38555052 cacttattcactttaaaagtgaatttctagccaccagactacctgac 38555006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 50676938 - 50676864
Alignment:
Q  290 acaatatatattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||||| ||||||||||||| | | | |||||||| |||| ||| ||||||||||||| || |||||||||||||    
T  50676938 acaatacatattatatgtaggggttggggttcgaaccccgaacaccccacttattcacctttaaggtgaatttct 50676864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 28226231 - 28226178
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccac 370  Q
    ||||||||||||| ||| ||||||||||||||||||| || ||||| |||||||    
T  28226231 ggttcgaatcccgaacaccccacttattcactttaaaagtaaatttgtagccac 28226178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 44671529 - 44671586
Alignment:
Q  326 cccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||| ||||||||||||||||||||||| |||||||||||  || |||| ||||||||    
T  44671529 cccgaacatcccacttattcactttaaaagtgaatttctattcattagactacctgac 44671586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 13874897 - 13874814
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctg 381  Q
    ||||||||| || | ||| ||||| |||||| ||||||||| |||||||| ||| |||||||||| |||||||||||| ||||||    
T  13874897 tattatatgcaggggtcggggttcaaatcccagacatcccatttattcaccttataaggtgaatt-ctagccactagactacctg 13874814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 382
Target Start/End: Original strand, 35140767 - 35140835
Alignment:
Q  314 cgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctga 382  Q
    |||||| ||||||||||||| |||| |||||||| ||| | || || |||||||||||||| |||||||    
T  35140767 cgaggtgcgaatcccggacaccccaattattcaccttataagttaaattctagccactagactacctga 35140835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 378
Target Start/End: Complemental strand, 41460394 - 41460331
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcac--tttaaaggtgaatttctagccactagattac 378  Q
    ||||||||||||||| | |||||||||||||  | |||| ||||||||||||||||||| ||||    
T  41460394 ggttcgaatcccggataccccacttattcaccttataaaagtgaatttctagccactagtttac 41460331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 383
Target Start/End: Original strand, 43774219 - 43774302
Alignment:
Q  300 ttatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||| || | ||| |||||||| ||| |||| ||||||||||||| ||| |||||||| ||||||||||||| |||||||||    
T  43774219 ttatatgcaggggtcggggttcgaaccccagacaccccacttattcaccttataaggtgaa-ttctagccactaggttacctgac 43774302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 364
Target Start/End: Original strand, 31202942 - 31203004
Alignment:
Q  301 tatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    ||||||||| | |||| ||||||| | || |||||||||||||||||||| |||||||||||||    
T  31202942 tatatgtagtggtcgatgttcgaaccacgaacatcccacttattcacttt-aaggtgaatttct 31203004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 382
Target Start/End: Complemental strand, 32453549 - 32453502
Alignment:
Q  335 cccacttattcactttaaaggtgaatttctagccactagattacctga 382  Q
    ||||||||||||||||||| |||||||||||| ||||||  |||||||    
T  32453549 cccacttattcactttaaaagtgaatttctagtcactaggctacctga 32453502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 33206808 - 33206874
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||| ||| |||||||| |||||||||||||  ||||||||    
T  33206808 ggttcgaaccccggacaccccacttattcaccttataaggtgaa-ttctagccactaggctacctgac 33206874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 45118712 - 45118751
Alignment:
Q  335 cccacttattcactttaa-aggtgaatttctagccactag 373  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  45118712 cccacttattcactttaagaggtgaatttctagccactag 45118751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 46328968 - 46328902
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||| ||| |||||||| |||||||||||||  ||||||||    
T  46328968 ggttcgaaccccggacaccccacttattcaccttataaggtgaa-ttctagccactaggctacctgac 46328902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 49429511 - 49429558
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||||||| |||||||| ||||||||||||| || |||||||||||||    
T  49429511 ggttcgaaccccggacaccccacttattcacctttaaggtgaatttct 49429558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 50271780 - 50271827
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||||||| |||| ||||||||||||||||| || |||||||||||||    
T  50271780 ggttcgaaccccgtacatcccacttattcacctttaaggtgaatttct 50271827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 50381765 - 50381812
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    ||||||||||||||||| ||||||||||||  || |||||||||||||    
T  50381765 ggttcgaatcccggacaccccacttattcatctttaaggtgaatttct 50381812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 3955359 - 3955424
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttt-aaaggtgaatttctagccactagattacctga 382  Q
    |||||||| |||||||| |||||||||||||||| ||| ||||| |||||||||||| | |||||||    
T  3955359 ggttcgaaccccggacaccccacttattcactttaaaaagtgaa-ttctagccactaaactacctga 3955424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 13540027 - 13539942
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||||||| | | | |||||||| |||||||| |||||||||| || ||| |||||||| ||||||||| |||| ||||||||    
T  13540027 tattatatgtaggggttggggttcgaaccccggacaccccacttatttaccttataaggtgaa-ttctagccattagactacctgac 13539942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 22602250 - 22602200
Alignment:
Q  314 cgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    ||||||||||||||| |||||| ||||||||||  || |||||||||||||    
T  22602250 cgaggttcgaatcccagacatcgcacttattcatctttaaggtgaatttct 22602200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 32508857 - 32508772
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| || | ||| |||||||| |||| ||| ||||||||||||| ||| |||||||| ||||||||||||  |||||||||    
T  32508857 tattatatgcaggggtcggggttcgaaccccgaacaccccacttattcaccttataaggtgaa-ttctagccactaagttacctgac 32508772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 363
Target Start/End: Original strand, 45431678 - 45431724
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttc 363  Q
    |||||||| |||||||| ||||||||||||| || ||||||||||||    
T  45431678 ggttcgaaccccggacaccccacttattcacctttaaggtgaatttc 45431724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 49639060 - 49639145
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattca-ctttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||||||| |  || |||||||| |||| ||| |||||||||||| |||  |||||||| ||||||||||||| |||||||||    
T  49639060 tattatatgtaggggccggggttcgaaccccgaacaccccacttattcaccttgtaaggtgaa-ttctagccactaggttacctgac 49639145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 20221465 - 20221518
Alignment:
Q  297 atattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttt 350  Q
    ||||||||||||| | |||  ||||||| | |||||||||||||||||||||||    
T  20221465 atattatatgtaggggtcggtgttcgaacctcggacatcccacttattcacttt 20221518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 21420252 - 21420187
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaattt 362  Q
    ||||||||| || | ||||||||||||||| ||||| |||||||||| || ||| |||||||||||    
T  21420252 tattatatgcagcggtcgaggttcgaatcctggacaccccacttatttaccttataaggtgaattt 21420187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 23651118 - 23651069
Alignment:
Q  313 tcgaggttcgaatcccggacatcccacttattcactttaaaggtgaattt 362  Q
    |||||||||||| | |||||||||||||||||||| || || ||||||||    
T  23651118 tcgaggttcgaacctcggacatcccacttattcacatttaaagtgaattt 23651069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 29645871 - 29645803
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatt--tctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||  || ||||||||||  ||||||||||||| ||| ||||    
T  29645871 ggttcgaaccccggacaccccacttattcatctttaaggtgaatttctctagccactagactacttgac 29645803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 31435545 - 31435477
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatt--tctagccactagattacctgac 383  Q
    |||||||| | |||||||||||||||||||  || ||||||||||  ||||||||||||| ||| ||||    
T  31435545 ggttcgaacctcggacatcccacttattcatctttaaggtgaatttctctagccactagactacttgac 31435477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 36763491 - 36763551
Alignment:
Q  326 cccggacatcccacttattca-ctttaaa--ggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||||||| |||||||  ||||||||||||||||||||| ||| ||||    
T  36763491 cccggacaccccacttattcatctttaaaaaggtgaatttctagccactagactacttgac 36763551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 17262268 - 17262300
Alignment:
Q  315 gaggttcgaatcccggacatcccacttattcac 347  Q
    ||||||||||||||||||| |||||||||||||    
T  17262268 gaggttcgaatcccggacaccccacttattcac 17262300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 35492804 - 35492856
Alignment:
Q  277 tcagttggtaagtacaatatatattatatgtagagttcgaggttcgaatcccg 329  Q
    |||||||||||| |||||  ||| |||||| | ||||||||||||||||||||    
T  35492804 tcagttggtaagaacaatgcataatatatgcaaagttcgaggttcgaatcccg 35492856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 43897632 - 43897700
Alignment:
Q  296 tatattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||||||||||||| | | || ||||||| | | |||| ||||||||||||| || |||||||||||||    
T  43897632 tatattatatgtagggattgatgttcgaacctcagacaccccacttattcacctttaaggtgaatttct 43897700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 7e-41; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 398 - 487
Target Start/End: Original strand, 9795557 - 9795646
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcactttttctataattttgtcggcct 487  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9795557 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcactttttctataattttgccggcct 9795646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 34034401 - 34034467
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  34034401 ggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagccactagactacctgac 34034467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 43871004 - 43871070
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  43871004 ggttcgaatcccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 43871070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 2304322 - 2304407
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||||||| | ||| |||||||| |||||||| |||||||||| |||||||| ||||||||||| |||||||  ||||||||    
T  2304322 tattatatgtaggggtcggggttcgaaccccggacaccccacttatttactttaaaagtgaatttctaaccactaggctacctgac 2304407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 29035027 - 29035083
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactag 373  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  29035027 ggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagccactag 29035083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 44187736 - 44187821
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| || | ||| |||||||| ||| |||| ||||||||||||||||||| |||||||| ||||||||| | ||||||||    
T  44187736 tattatatgcaggggtcggggttcgaaccccagacaccccacttattcactttaaaagtgaatttttagccactaaactacctgac 44187821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 383
Target Start/End: Original strand, 11133110 - 11133193
Alignment:
Q  300 ttatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||| || | ||| |||||||| |||||||| ||||||||||||| ||| |||||||| ||||||||||||| |||||||||    
T  11133110 ttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttataaggtgaa-ttctagccactaggttacctgac 11133193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 13019274 - 13019327
Alignment:
Q  316 aggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagcca 369  Q
    ||||| ||| ||||||||  |||||||||||| |||||||||||||||||||||    
T  13019274 aggttggaaacccggacacaccacttattcaccttaaaggtgaatttctagcca 13019327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 8234855 - 8234780
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactag 373  Q
    |||||||||||| |  || |||||||| |||||||| ||||||||||||| ||| |||||||| |||||||||||||    
T  8234855 tattatatgtaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaa-ttctagccactag 8234780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 366
Target Start/End: Complemental strand, 21970502 - 21970434
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctag 366  Q
    ||||||||| || | ||| |||||||| |||||| | ||| ||||||||||||||| ||||||||||||    
T  21970502 tattatatgcagggatcggggttcgaaccccggataccccgcttattcactttaaaagtgaatttctag 21970434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 383
Target Start/End: Original strand, 29664637 - 29664720
Alignment:
Q  300 ttatatgtagagttcgaggttcgaatcccggacatcccacttattca-ctttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||| || | ||| ||||| ||||||||||| |||||||||||| |||  |||||||| |||||||||||||| ||||||||    
T  29664637 ttatatgcaggggtcggggttcaaatcccggacaccccacttattcatcttataaggtgaa-ttctagccactagactacctgac 29664720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 365
Target Start/End: Complemental strand, 32527121 - 32527073
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttcta 365  Q
    |||||||| ||| |||| ||||||||||||||||||| |||||||||||    
T  32527121 ggttcgaaccccagacaacccacttattcactttaaaagtgaatttcta 32527073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 469
Target Start/End: Complemental strand, 35917918 - 35917847
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcacttttt 469  Q
    ||||||| ||||||||| | |||||||| | | ||  | ||||||||||||||||||||||||| |||||||    
T  35917918 gttgcatttttaaaattattgataatttaaatgattcaaatgataattttatcattagaaactttacttttt 35917847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 3179356 - 3179441
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| || | |||||||||||| | | |||| ||||||||||||| ||| |||||||| |||||||||||||  ||||||||    
T  3179356 tattatatgcaggggtcgaggttcgaacctcagacaccccacttattcaccttataaggtgaa-ttctagccactaggctacctgac 3179441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 16028171 - 16028086
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| || | ||| ||||||||  || |||||||||||||||||||||| |||||||| |||||||||| ||| || |||||    
T  16028171 tattatatgcagtggtcggggttcgaactccagacatcccacttattcactttataaggtgaa-ttctagccaccagactatctgac 16028086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 383
Target Start/End: Complemental strand, 30474242 - 30474173
Alignment:
Q  314 cgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||||||| ||| |||| ||||||||||||| ||| |||||||| ||||||||||| | |||||||||    
T  30474242 cgaggttcgaaccccagacaccccacttattcaccttataaggtgaa-ttctagccactgggttacctgac 30474173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 372
Target Start/End: Original strand, 36106853 - 36106926
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccacta 372  Q
    |||||||||| | | | |||||||||| ||| ||||  ||| |||||||||||||| ||||||||||||||||||    
T  36106853 tattatatgttgggattgaggttcgaa-ccctgacactccatttattcactttaaaagtgaatttctagccacta 36106926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 380
Target Start/End: Original strand, 41535238 - 41535303
Alignment:
Q  315 gaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacct 380  Q
    |||||||||| |||||| | ||||||||||||||||| ||||||||||| |||||| |||| |||||    
T  41535238 gaggttcgaaccccggataccccacttattcactttataaggtgaattt-tagccattagactacct 41535303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 382
Target Start/End: Complemental strand, 2114498 - 2114414
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctga 382  Q
    |||||||||||| | ||| |||||||| |||||||| | || |||||||| ||| |||||||| ||||||||||| || |||||||    
T  2114498 tattatatgtaggggtcggggttcgaaccccggacacctcatttattcaccttataaggtgaa-ttctagccactggactacctga 2114414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 353
Target Start/End: Complemental strand, 14307755 - 14307702
Alignment:
Q  300 ttatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaa 353  Q
    ||||||| || | |||||||||||| |||| ||| |||||||||||||||||||    
T  14307755 ttatatgcaggggtcgaggttcgaaccccgaacaccccacttattcactttaaa 14307702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 382
Target Start/End: Complemental strand, 17115587 - 17115523
Alignment:
Q  318 gttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctga 382  Q
    ||||||| ||||||||||||| |||||||||||| |||||||| ||||||| |||||  |||||||    
T  17115587 gttcgaaccccggacatcccatttattcactttataaggtgaa-ttctagcaactaggctacctga 17115523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 347
Target Start/End: Original strand, 20533789 - 20533838
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcac 347  Q
    ||||||||| |||| |||||||||||| |||  |||||||||||||||||    
T  20533789 tattatatgcagagatcgaggttcgaaccccacacatcccacttattcac 20533838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 36520843 - 36520794
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcac 347  Q
    |||||||||||| | ||| |||||||| |||||||| |||||||||||||    
T  36520843 tattatatgtaggggtcggggttcgaaccccggacaccccacttattcac 36520794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 43684327 - 43684376
Alignment:
Q  315 gaggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||||||||| |||| ||| ||||||||||||| || |||||||||||||    
T  43684327 gaggttcgaaccccgaacaccccacttattcacctttaaggtgaatttct 43684376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 380
Target Start/End: Original strand, 1244620 - 1244685
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttt---aaaggtgaatttctagccactagattacct 380  Q
    |||||||| |||||||| ||||||||||||| ||   ||||||||| |||||||||||||| |||||    
T  1244620 ggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaa-ttctagccactagactacct 1244685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 11837021 - 11837096
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactag 373  Q
    |||||||||||| | ||| |||||||| |||||||| | ||||||||||| ||| || ||||| |||||||||||||    
T  11837021 tattatatgtaggggtcggggttcgaaccccggacacctcacttattcaccttataaagtgaa-ttctagccactag 11837096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 23403357 - 23403409
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagcca 369  Q
    |||||||| ||||||   ||||||||||||| |||||||||||||| ||||||    
T  23403357 ggttcgaaccccggattccccacttattcaccttaaaggtgaatttatagcca 23403409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 383
Target Start/End: Complemental strand, 42678367 - 42678300
Alignment:
Q  318 gttcgaatcccggacatcccacttattcactttaaaggtgaatt--tctagccactagattacctgac 383  Q
    ||||||| |||||||| ||||||||||||  || ||||||||||  |||| |||||||||||| ||||    
T  42678367 gttcgaaccccggacaccccacttattcatctttaaggtgaatttctctaaccactagattacttgac 42678300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 4e-27; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 402 - 487
Target Start/End: Complemental strand, 27024364 - 27024278
Alignment:
Q  402 catctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttca-ctttttctataattttgtcggcct 487  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  27024364 catctttaaaattgtagataatttgactgatcctgatgataattttatcattagaaacttcacctttttctataatttggtcggcct 27024278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 13870125 - 13870059
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  13870125 ggtttgaatcccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 13870059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 25819236 - 25819302
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||| | ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  25819236 ggttcgaaccccggataccccacttattcactttaaaagtgaatttctagccactagactacctgac 25819302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 17954920 - 17954847
Alignment:
Q  300 ttatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactag 373  Q
    ||||||| || | ||| ||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  17954920 ttatatgcagggatcgtggttcgaataccggacaccccacttattcactttaaaagtgaatttctagccactag 17954847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 383
Target Start/End: Complemental strand, 47763428 - 47763363
Alignment:
Q  318 gttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||| | |||||||||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  47763428 gttcgaacctcggacatcccacttattcactttaaaagtgaatttctagccactaggctacctgac 47763363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 17350112 - 17350168
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactag 373  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  17350112 ggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagccactag 17350168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 29491502 - 29491576
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactag 373  Q
    ||||||||| || | ||| |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  29491502 tattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaa-gtgaatttctagccactag 29491576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 373
Target Start/End: Original strand, 39238764 - 39238823
Alignment:
Q  314 cgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactag 373  Q
    ||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  39238764 cgaggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagccgctag 39238823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 40678874 - 40678940
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||  |||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  40678874 ggttcgatccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 40678940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 382
Target Start/End: Complemental strand, 52833150 - 52833085
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctga 382  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||| ||||||  |||||||    
T  52833150 ggttcgaaccccggacatcccatttattcactttaaaagtgaatttctagacactaggctacctga 52833085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 19976596 - 19976540
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactag 373  Q
    |||||||| |||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  19976596 ggttcgaaccccggacaccccacatattcactttaaaagtgaatttctagccactag 19976540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 49916472 - 49916557
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||||||| | ||| |||||||||||||||||||||| |||||||  ||| |||||||| |||||||||||| | ||||||||    
T  49916472 tattatatgtaggggtcggggttcgaatcccggacatcccatttattcatattataaggtgaa-ttctagccactaaactacctgac 49916557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 32635191 - 32635248
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaa-aggtgaatttctagccactag 373  Q
    |||||||| |||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  32635191 ggttcgaaccccggacaccccacttattcaccttaagaggtgaatttctagccactag 32635248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 18439629 - 18439673
Alignment:
Q  20 gatcctacaagcaattaatttaaaactaatgcttgtttaccaaaa 64  Q
    |||||| |||||||||||||||||||||||| |||||||||||||    
T  18439629 gatcctgcaagcaattaatttaaaactaatgattgtttaccaaaa 18439673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 18450487 - 18450531
Alignment:
Q  20 gatcctacaagcaattaatttaaaactaatgcttgtttaccaaaa 64  Q
    |||||| |||||||||||||||||||||||| |||||||||||||    
T  18450487 gatcctgcaagcaattaatttaaaactaatgattgtttaccaaaa 18450531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 372
Target Start/End: Complemental strand, 15774375 - 15774301
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccacta 372  Q
    |||||||||||| | ||| |||||||| |||||||| ||||||||||||| ||| |||||||| ||||||||||||    
T  15774375 tattatatgtaggggtcggggttcgaaccccggacaccccacttattcaccttataaggtgaa-ttctagccacta 15774301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 19424077 - 19424144
Alignment:
Q  297 atattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||||||||| || | ||| |||||||| |||||||| ||||||||||||| || |||||||||||||    
T  19424077 atattatatgcaggggtcggggttcgaaccccggacaccccacttattcacctttaaggtgaatttct 19424144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 35111700 - 35111755
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccacta 372  Q
    |||||||| |||  ||| ||||||||||||||||||| ||||||||||||||||||    
T  35111700 ggttcgaacccctaacaccccacttattcactttaaaagtgaatttctagccacta 35111755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 373
Target Start/End: Complemental strand, 23368775 - 23368718
Alignment:
Q  318 gttcgaatcccggacatcccacttattcactttaaaggtgaatt--tctagccactag 373  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||  ||||||||||||    
T  23368775 gttcgaaccccggacaccccacttattcacattaaaggtgaatttatctagccactag 23368718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 39994909 - 39994836
Alignment:
Q  300 ttatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactag 373  Q
    |||||||||| |  || |||| |||||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  39994909 ttatatgtaggggccggggtttgaatcccggacatcccacttattcaccttataaggtgaa-ttctagccactag 39994836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 367
Target Start/End: Original strand, 38021304 - 38021353
Alignment:
Q  318 gttcgaatcccggacatcccacttattcactttaaaggtgaatttctagc 367  Q
    ||||||| |||||||| ||||||||||||||||||| |||||||| ||||    
T  38021304 gttcgaaccccggacaccccacttattcactttaaaagtgaatttttagc 38021353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 29106902 - 29106846
Alignment:
Q  327 ccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||| |||| |||||||||| ||| |||||||||||||||| || |||||||||    
T  29106902 ccggacaccccatttattcacttgaaaagtgaatttctagccaccaggttacctgac 29106846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 9413797 - 9413864
Alignment:
Q  265 cgtgaatttaattcagttggtaagtacaatatatattatatgtagagttcgaggttcgaatcccggac 332  Q
    ||||| |||| ||||||||||||| |||||  ||| ||||||||  ||||| ||||||||||||||||    
T  9413797 cgtgagtttagttcagttggtaagaacaatgcataatatatgtaaggttcggggttcgaatcccggac 9413864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 12553245 - 12553313
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttt---aaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||||||   ||||||||| |||||||||||||  ||||||||    
T  12553245 ggttcgaaccccggacaccccacttattcactttgaaaaaggtgaa-ttctagccactaggctacctgac 12553313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 15368856 - 15368922
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| |||||||||||| |||| |||||||| |||||||||||||  ||||||||    
T  15368856 ggttcgaaccccggacaccccacttattcattttataaggtgaa-ttctagccactaggctacctgac 15368922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 42946511 - 42946464
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||| ||| |||||||| ||||||||||||| ||||||||||||||||    
T  42946511 ggtttgaaccccggacaccccacttattcaccttaaaggtgaatttct 42946464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 11213512 - 11213427
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||||||||| | |  ||||||| |||||||| |||||||||| |||||| |||||||| |||||| || |||| ||||||||    
T  11213512 tattatatgtagaggttggagttcgaaccccggacaccccacttatttactttataaggtgaa-ttctagtcaatagactacctgac 11213427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 12675768 - 12675730
Alignment:
Q  336 ccacttattcactttaaaggtgaatttctagccactaga 374  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  12675768 ccacttattcactttaaaagtgaatttctaaccactaga 12675730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 382
Target Start/End: Original strand, 4616905 - 4616989
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctga 382  Q
    |||||||||||| | ||| |||||||| | | |||| ||||||||||||| ||| || ||||| |||||||||||||| |||||||    
T  4616905 tattatatgtaggggtcgcggttcgaaccacagacaccccacttattcaccttataaagtgaa-ttctagccactagactacctga 4616989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 7438672 - 7438740
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttc--tagccactagattacctgac 383  Q
    ||||||||  ||||||| ||||||||||||  |||||||||||||||  ||||||||||| ||| ||||    
T  7438672 ggttcgaactccggacaccccacttattcatcttaaaggtgaatttctttagccactagactacttgac 7438740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 372
Target Start/End: Original strand, 11405490 - 11405562
Alignment:
Q  300 ttatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccacta 372  Q
    ||||||| || | ||| |||||||| |||||||| ||||||||||||| ||| |||||||| ||||||||||||    
T  11405490 ttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttataaggtgaa-ttctagccacta 11405562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 364
Target Start/End: Complemental strand, 25800391 - 25800330
Alignment:
Q  303 tatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    ||||||| || || ||||| || |||||||| ||||||||||||  ||||||||||||||||    
T  25800391 tatgtagggtccggggttccaaccccggacaccccacttattcatcttaaaggtgaatttct 25800330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 32660881 - 32660938
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaa-aggtgaatttctagccactag 373  Q
    ||||| || |||||||| ||||||| ||||| |||| |||||||||||||||||||||    
T  32660881 ggttcaaaccccggacaccccactttttcaccttaagaggtgaatttctagccactag 32660938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 383
Target Start/End: Complemental strand, 2044982 - 2044942
Alignment:
Q  343 ttcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||||| |||||||||||||||||||  ||||||||    
T  2044982 ttcactttaaaagtgaatttctagccactaggctacctgac 2044942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 346
Target Start/End: Complemental strand, 11238091 - 11238043
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattca 346  Q
    ||||||||| || | ||| ||||||||||||||||| ||||||||||||    
T  11238091 tattatatgcaggggtcggggttcgaatcccggacaccccacttattca 11238043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 19516511 - 19516479
Alignment:
Q  338 acttattcactttaaaggtgaatttctagccac 370  Q
    |||||||||||||||| ||||||||||||||||    
T  19516511 acttattcactttaaaagtgaatttctagccac 19516479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 372
Target Start/End: Original strand, 27321299 - 27321335
Alignment:
Q  336 ccacttattcactttaaaggtgaatttctagccacta 372  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  27321299 ccacttattcattttaaaggtgaatttttagccacta 27321335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 32585399 - 32585451
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagcca 369  Q
    |||||||| |||||||| ||||||| |||| || | |||||||||||||||||    
T  32585399 ggttcgaaccccggacaccccactttttcatttaagaggtgaatttctagcca 32585451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 34560383 - 34560316
Alignment:
Q  316 aggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| | |||||| ||||||||||||| ||| |||||||| |||||| ||||||| ||||||||    
T  34560383 aggttcgaacctcggacaccccacttattcaccttataaggtgaa-ttctagtcactagactacctgac 34560316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 6e-26; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 398 - 470
Target Start/End: Complemental strand, 15107807 - 15107735
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcactttttc 470  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  15107807 gttgcatctttaaaattgtagataatttgactgatctagatgataactttttcattagaaacttcactttttc 15107735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 382
Target Start/End: Original strand, 29284128 - 29284234
Alignment:
Q  277 tcagttggtaagtacaatatat-attatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagat 375  Q
    |||||||||| | ||||| ||| ||||||||||| | ||| |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||      
T  29284128 tcagttggtaggaacaatgtattattatatgtagggatcggggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagccactaggc 29284227  T
Q  376 tacctga 382  Q
    |||||||    
T  29284228 tacctga 29284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 398 - 487
Target Start/End: Original strand, 19403302 - 19403392
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcacttttt-ctataattttgtcggcct 487  Q
    |||||||||||||||||||||||||||||||| ||  ||||| ||||||  |||||||||| |||||||||| || |||||||||||||||    
T  19403302 gttgcatctttaaaattgtagataatttgactgattcagatggtaatttattcattagaaatttcactttttcctgtaattttgtcggcct 19403392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 33628985 - 33628929
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactag 373  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  33628985 ggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagccactag 33628929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 14981746 - 14981680
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| || ||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  14981746 ggttcgaaccctggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 14981680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 382
Target Start/End: Complemental strand, 24470434 - 24470370
Alignment:
Q  318 gttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctga 382  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||||||||||| |||  |||||||    
T  24470434 gttcgaaccccggaaatcccacttattcactttaaaagtgaatttctagccaataggctacctga 24470370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 9064917 - 9064983
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| ||| |||| |||||||||| |||||||| |||||||||||||||||||  ||||||||    
T  9064917 ggttcgaaccccagacaccccacttatttactttaaaagtgaatttctagccactaggctacctgac 9064983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 371
Target Start/End: Original strand, 6143997 - 6144069
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccact 371  Q
    |||||||||||| | ||| |||||||| |||||||| |||||||||||||||||||  ||||||||| ||||||    
T  6143997 tattatatgtaggggtcg-ggttcgaaccccggacaccccacttattcactttaaaactgaatttctggccact 6144069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 22389794 - 22389728
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||| |||||||| ||||| ||||||||    
T  22389794 ggttcgaatcccggacaccccacttattcaccttataaggtgaa-ttctagccgctagactacctgac 22389728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 6658587 - 6658531
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactag 373  Q
    |||||||| |||||||| ||||||||||| | ||||| | |||||||||||||||||    
T  6658587 ggttcgaaccccggacaccccacttattctccttaaaagagaatttctagccactag 6658531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 25020572 - 25020506
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||| ||| |||||||| |||||||||||||  ||||||||    
T  25020572 ggttcgaaccccggacaccccacttattcaccttataaggtgaa-ttctagccactaggctacctgac 25020506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 10377187 - 10377102
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| ||||  || |||||||| |||| ||| ||||||||||||| ||| ||| |||| |||||||||||||| ||||||||    
T  10377187 tattatatgcagaggccggggttcgaaccccgaacaccccacttattcacgttataagatgaa-ttctagccactagactacctgac 10377102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 12089149 - 12089214
Alignment:
Q  318 gttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||| |||||||| ||||||||||||| ||| |||||||| |||||||||||||  ||||||||    
T  12089149 gttcgaaccccggacaccccacttattcaccttataaggtgaa-ttctagccactaggatacctgac 12089214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 372
Target Start/End: Complemental strand, 20568341 - 20568244
Alignment:
Q  277 tcagttggtaagtacaatatatattatatgtagagttcgaggttcgaatcccggacatcccacttattcac--tttaaaggtgaatttctagccacta 372  Q
    |||||||||||| ||| |  ||| |||||| || | ||| |||||||| |||| ||| |||||||||||||  | ||||||||||||||||| |||||    
T  20568341 tcagttggtaaggacattgcataatatatgcaggggtcggggttcgaaccccgaacaccccacttattcaccttataaaggtgaatttctagtcacta 20568244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 30566090 - 30566175
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| |||| | || ||| ||| |||||||| ||||||||||||| ||| |||||||| ||| |||||||||| ||||||||    
T  30566090 tattatatgcagaggttgaagtttgaaccccggacaccccacttattcaccttataaggtgaa-ttccagccactagactacctgac 30566175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Complemental strand, 7927101 - 7927068
Alignment:
Q  330 gacatcccacttattcactttaaaggtgaatttc 363  Q
    ||||||||||||||||||||||||| ||||||||    
T  7927101 gacatcccacttattcactttaaagatgaatttc 7927068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 10424598 - 10424549
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcac 347  Q
    |||||||||||| | ||| |||| |||||||||||| |||||||||||||    
T  10424598 tattatatgtaggggtcgtggtttgaatcccggacaccccacttattcac 10424549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 11636746 - 11636803
Alignment:
Q  326 cccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| ||||||| |||| |||||| ||||||||||| |||||||  ||||||||    
T  11636746 cccggacaccccactttttcattttaaaagtgaatttctaaccactaggctacctgac 11636803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 12127951 - 12127887
Alignment:
Q  319 ttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||| ||||||||  |||||||||||| ||| |||||||||| |||||||||||| ||||||||    
T  12127951 ttcgaaccccggacacgccacttattcaccttataaggtgaatt-ctagccactagactacctgac 12127887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 363
Target Start/End: Complemental strand, 7929104 - 7929072
Alignment:
Q  331 acatcccacttattcactttaaaggtgaatttc 363  Q
    |||||||||||||||||||||||| ||||||||    
T  7929104 acatcccacttattcactttaaagatgaatttc 7929072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 398 - 470
Target Start/End: Original strand, 37381528 - 37381600
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcactttttc 470  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  37381528 gttgtatctttaaaattgtagataacttgactgatctagatgataattttttcattagaaacttcactttttc 37381600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 398 - 470
Target Start/End: Original strand, 48260746 - 48260818
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcactttttc 470  Q
    |||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||| |||||||| ||||||    
T  48260746 gttgtatctttaaaattgtagataatttgactgatccggatgataattttatcattaaaaacttcattttttc 48260818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 31475884 - 31475821
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacct 380  Q
    |||||||| ||| |||| ||||||||||||||||||| |||||||||||||||||||| |||||    
T  31475884 ggttcgaacccctgacaccccacttattcactttaaaagtgaatttctagccactagactacct 31475821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 41139119 - 41139194
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactag 373  Q
    ||||||||| || | ||| |||||||||||||||||   ||||||||||||||||| |||||||||||||||||||    
T  41139119 tattatatgcaggggtcggggttcgaatcccggacacttcacttattcactttaaaagtgaatttctagccactag 41139194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 3961452 - 3961405
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||    
T  3961452 ggttcgaaccccggacatcccacttattcattttaaaggtgaatttct 3961405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 28914921 - 28914874
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  28914921 ggttcgaaccccggacaccccacttattcactttaaaggtgaatttct 28914874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 38451914 - 38451980
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||| |||||||||||||| ||||||||    
T  38451914 ggttcgaatcccggacaccccacttattcacattataaggtgaa-ttctagccactagactacctgac 38451980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 315 - 365
Target Start/End: Original strand, 19126786 - 19126836
Alignment:
Q  315 gaggttcgaatcccggacatcccacttattcactttaaaggtgaatttcta 365  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  19126786 gaggttcgaaccccggacaccccacttattcactttaaaagtgaatttcta 19126836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 24396997 - 24397062
Alignment:
Q  318 gttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||| || ||||| || |||||||||||||||| |||||||||||||||||||  ||||||||    
T  24396997 gttcgaaccctggacaccctacttattcactttaaaagtgaatttctagccactaggctacctgac 24397062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 374
Target Start/End: Complemental strand, 21461696 - 21461637
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttt--aaaggtgaatttctagccactaga 374  Q
    |||||||||| |||||||||||||||||||||||  |||||||||||| || ||||||||    
T  21461696 ggttcgaatctcggacatcccacttattcactttaaaaaggtgaatttataaccactaga 21461637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 40011738 - 40011810
Alignment:
Q  292 aatatatattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||| |||||||||| || | |||||||||||| |||| |||||||||||||| ||||| || ||||||||||    
T  40011738 aatacatattatatgcaggggtcgaggttcgaaccccgaacatcccacttatttacttttaaagtgaatttct 40011810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 383
Target Start/End: Complemental strand, 41417337 - 41417253
Alignment:
Q  299 attatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| || | ||| |||||||| ||| |||| ||||||||||||||||||| |||||||| |||||| |||| ||| ||||    
T  41417337 attatatgcaggggtcggggttcgaaccccagacaccccacttattcactttaaaagtgaatttttagccattagactacttgac 41417253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 383
Target Start/End: Original strand, 34948154 - 34948223
Alignment:
Q  314 cgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||| |||||||||||||  ||||||||    
T  34948154 cgaggttcgaaccccggacaccccacttattcaccttataaggtgaa-ttctagccactaggctacctgac 34948223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 41000793 - 41000847
Alignment:
Q  299 attatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaa 353  Q
    |||||||| |||| ||||| ||||||||||| ||||||||||||||||| |||||    
T  41000793 attatatgcagagatcgagattcgaatcccgaacatcccacttattcaccttaaa 41000847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 371
Target Start/End: Complemental strand, 14818428 - 14818355
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccact 371  Q
    ||||||||| || | ||| ||||| || |||  ||| ||||||||||||||||||| |||||||||||||||||    
T  14818428 tattatatgcaggggtcggggttcaaaccccaaacaccccacttattcactttaaaagtgaatttctagccact 14818355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 371
Target Start/End: Complemental strand, 15265426 - 15265353
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccact 371  Q
    ||||||||| || | ||| ||||| || |||  ||| ||||||||||||||||||| |||||||||||||||||    
T  15265426 tattatatgcaggggtcggggttcaaaccccaaacaccccacttattcactttaaaagtgaatttctagccact 15265353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 381
Target Start/End: Complemental strand, 35890933 - 35890870
Alignment:
Q  318 gttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctg 381  Q
    |||||||||||| ||| ||||||||||||  ||| |||||||||| |||||||||||||||||||    
T  35890933 gttcgaatcccgaacaccccacttattcatcttataaggtgaatt-ctagccactagattacctg 35890870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 3889844 - 3889797
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||||||| |||||||| ||||||||||||  ||||||||||||||||    
T  3889844 ggttcgaaccccggacaccccacttattcatcttaaaggtgaatttct 3889797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 5228121 - 5228168
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    ||||||||||| ||||| ||||||||||||| || |||||||||||||    
T  5228121 ggttcgaatcctggacaccccacttattcacctttaaggtgaatttct 5228168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 20013633 - 20013679
Alignment:
Q  318 gttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||||||||||||||||||||||||| ||| || ||| |||||||||    
T  20013633 gttcgaatcccggacatcccacttatccacctttaagatgaatttct 20013679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 372
Target Start/End: Complemental strand, 24304346 - 24304272
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccacta 372  Q
    ||||||||| || | ||| ||||||||  ||| ||| |||| |||||||||||||| || |||||||||||||||    
T  24304346 tattatatgcaggggtcggggttcgaactccgaacaccccatttattcactttaaaagtaaatttctagccacta 24304272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 42694817 - 42694751
Alignment:
Q  403 atctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcacttttt 469  Q
    |||||||||||| | |||||||| ||| ||  |||| ||||| ||||||||| ||||||||||||||    
T  42694817 atctttaaaattattgataatttaactgattcagattataatcttatcattataaacttcacttttt 42694751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 21285397 - 21285341
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactag 373  Q
    |||||||| |||||||| ||||||||||||| ||| |||||||| |||||||||||||    
T  21285397 ggttcgaaccccggacaccccacttattcaccttataaggtgaa-ttctagccactag 21285341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 29658316 - 29658260
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactag 373  Q
    |||||||| |||||||| ||||||||||||| ||| |||||||| |||||||||||||    
T  29658316 ggttcgaaccccggacaccccacttattcaccttataaggtgaa-ttctagccactag 29658260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 31191681 - 31191600
Alignment:
Q  252 atatataaattcccgtgaatttaattcagttggtaagtacaatatatattatatgtagagttcgaggttcgaatcccggaca 333  Q
    ||||||||||||||||||  ||||||||||||||||| | | |  |||||||||| || | |||  ||||||| ||||||||    
T  31191681 atatataaattcccgtgagcttaattcagttggtaaggatattgcatattatatgcagggatcggagttcgaaccccggaca 31191600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 350
Target Start/End: Original strand, 47880197 - 47880230
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttt 350  Q
    ||||||||||||||||| ||||||||||||||||    
T  47880197 ggttcgaatcccggacaccccacttattcacttt 47880230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 4590657 - 4590589
Alignment:
Q  317 ggttcgaatcccggacatcccacttattca-ctttaaaggtgaa-tttctagccactagattacctgac 383  Q
    ||||||||||||||||| | |||||||||| |||  |||||||| ||||||||||||||  ||||||||    
T  4590657 ggttcgaatcccggacaccacacttattcatcttataaggtgaattttctagccactaggctacctgac 4590589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 23602326 - 23602393
Alignment:
Q  318 gttcgaatcccggacatcccacttattcactttaaaggtgaatttc--tagccactagattacctgac 383  Q
    ||||||| |||||||| | ||||||||||| || ||||||||||||  ||||||||||| ||| ||||    
T  23602326 gttcgaaccccggacacctcacttattcacctttaaggtgaatttctttagccactagactacttgac 23602393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 27454058 - 27454110
Alignment:
Q  313 tcgaggttcgaatcccggacatcccacttattca-ctttaaaggtgaatttct 364  Q
    |||||||||||| | |||||| |||||||||||| ||| ||||||||||||||    
T  27454058 tcgaggttcgaacctcggacaccccacttattcatcttaaaaggtgaatttct 27454110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 341
Target Start/End: Complemental strand, 28735286 - 28735218
Alignment:
Q  273 taattcagttggtaagtacaatatatattatatgtagagttcgaggttcgaatcccggacatcccactt 341  Q
    |||||||||||||||| |||||  ||| |||||| |||| |||| |||||||| |  ||||||||||||    
T  28735286 taattcagttggtaaggacaatgcataatatatgcagaggtcgaagttcgaattctagacatcccactt 28735218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 36528262 - 36528218
Alignment:
Q  318 gttcgaatcccggacatcccacttattcactttaaaggtgaattt 362  Q
    ||||||| |||||||||||||| |||||| ||| |||||||||||    
T  36528262 gttcgaaccccggacatcccacctattcatttttaaggtgaattt 36528218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1619 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold1619
Description:

Target: scaffold1619; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 409 - 487
Target Start/End: Complemental strand, 749 - 670
Alignment:
Q  409 aaaattgtagataatttgactaatctagatgataattttatcattagaaacttcactttttc-tataattttgtcggcct 487  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| | |||||||||||||||    
T  749 aaaattgtagataatttgactgatcgagatgataattttttcattagaaacttcactttttcatgtaattttgtcggcct 670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 8e-22; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 20735238 - 20735153
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||||||| |  || ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  20735238 tattatatgtaggggccggggttcgaatcccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 20735153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 398 - 470
Target Start/End: Original strand, 11140981 - 11141053
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcactttttc 470  Q
    |||||||||||||||||||||||||||| ||| ||| | ||||||||||| ||||||||||||||||||||||    
T  11140981 gttgcatctttaaaattgtagataattttactgatccaaatgataattttttcattagaaacttcactttttc 11141053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 18303122 - 18303056
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||| ||| ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  18303122 ggttcgaaccccgaacaccccacttattcactttaaaagtgaatttctagccactagactacctgac 18303056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 4674878 - 4674793
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| || | ||| |||||||| |||||||| ||||||||||||||||||| ||||||||||| |||||| | ||||||||    
T  4674878 tattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaagtgaatttctaaccactaaactacctgac 4674793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 25346235 - 25346290
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccacta 372  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  25346235 ggttcgaatcccggacaccccacgtattcactttaaaagtgaatttctagccacta 25346290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 1463922 - 1463988
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||| ||  ||||||||    
T  1463922 ggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagccaccaggctacctgac 1463988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 365
Target Start/End: Complemental strand, 36045197 - 36045130
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttcta 365  Q
    ||||||||| || | ||| |||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  36045197 tattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaagtgaatttcta 36045130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 372
Target Start/End: Complemental strand, 38230249 - 38230194
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccacta 372  Q
    |||| |||||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  38230249 ggtttgaatcccggacacctcacttattcactttaaaagtgaatttctagccacta 38230194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 297 - 373
Target Start/End: Original strand, 18175238 - 18175316
Alignment:
Q  297 atattatatgtagagttcgaggttcgaatcccggacatcccacttattca-cttta-aaggtgaatttctagccactag 373  Q
    ||||||||||||| | ||| |||||||| ||| ||||||||||||||||| |||||  |||||||||||||||||||||    
T  18175238 atattatatgtaggggtcggggttcgaaccccagacatcccacttattcatctttatgaggtgaatttctagccactag 18175316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 6671830 - 6671764
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| ||||||||| ||||||||||  ||| |||||||||| |||||||||||||||||||||    
T  6671830 ggttcgaattccggacatctcacttattcatcttataaggtgaatt-ctagccactagattacctgac 6671764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 20945935 - 20945869
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||||  ||||||| ||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  20945935 ggttcgaaatccggacaccccacttattcaccttataaggtgaatt-ctagccactagattacctgac 20945869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 6447524 - 6447458
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| | |||||| |||||||||||||||||||  |||||||||| |||||| | ||||||||    
T  6447524 ggttcgaacctcggacaccccacttattcactttaaaaatgaatttctaaccactacactacctgac 6447458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 37303966 - 37304050
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| || | ||| |||||||| || ||||| |||||||||||||||||||  ||||||| ||||||||||  ||||||||    
T  37303966 tattatatgcaggggtcggggttcgaaccctggacaccccacttattcactttaaa-atgaatttatagccactaggctacctgac 37304050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 33599960 - 33599996
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaa 353  Q
    ||||||||||||||||||||||||||||||| |||||    
T  33599960 ggttcgaatcccggacatcccacttattcaccttaaa 33599996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 37417173 - 37417118
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactag 373  Q
    |||||||| ||| |||| |||||||| |||||||||| |||||||||||||||||||    
T  37417173 ggttcgaa-ccctgacaccccacttactcactttaaaagtgaatttctagccactag 37417118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 1244771 - 1244705
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||| ||| |||| ||||||||||||| ||| |||||||||| ||||||||||| |||||||||    
T  1244771 ggttcgaaccccagacaccccacttattcaccttataaggtgaatt-ctagccactaggttacctgac 1244705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 34729503 - 34729569
Alignment:
Q  297 atattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||||||||| || | ||| |||||||| |||||||| ||||||||||||| || |||||||||||||    
T  34729503 atattatatgcaggggtcggggttcgaa-cccggacaccccacttattcacctttaaggtgaatttct 34729569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 361
Target Start/End: Complemental strand, 35168679 - 35168632
Alignment:
Q  314 cgaggttcgaatcccggacatcccacttattcactttaaaggtgaatt 361  Q
    ||||||||||| |||||||| ||||||||||||| || ||||||||||    
T  35168679 cgaggttcgaaccccggacaccccacttattcacctttaaggtgaatt 35168632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 10943767 - 10943832
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttt-aaaggtgaatttctagccactagattacctga 382  Q
    |||||||| |||||||| |||||||||||||||| ||| ||||| |||||||||||||  |||||||    
T  10943767 ggttcgaaccccggacaccccacttattcactttaaaaagtgaa-ttctagccactaggctacctga 10943832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 383
Target Start/End: Complemental strand, 29096351 - 29096286
Alignment:
Q  318 gttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||| |||||||| ||||||||||||| ||| |||||||| |||||||||||||  ||||||||    
T  29096351 gttcgaaccccggacaccccacttattcaccttataaggtgaa-ttctagccactaggctacctgac 29096286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 8015886 - 8015946
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagatta 377  Q
    |||||||| |||||||| ||||||||||||| ||| |||||||| ||||| |||||||||||    
T  8015886 ggttcgaaccccggacaccccacttattcaccttataaggtgaa-ttctacccactagatta 8015946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 373
Target Start/End: Original strand, 17077414 - 17077470
Alignment:
Q  319 ttcgaatcccggacatcccacttattcactttaaaggtgaatt--tctagccactag 373  Q
    |||||| |||||||| ||||||||||||  |||||||||||||  ||||||||||||    
T  17077414 ttcgaaccccggacaccccacttattcatcttaaaggtgaatttatctagccactag 17077470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 18872553 - 18872636
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| || | ||| |||||||| |||| ||| ||||||||||||| || |||||||| |||||||||||||  ||||||||    
T  18872553 tattatatgcaggggtcggggttcgaaccccgaacaccccacttattcacctt-aaggtgaa-ttctagccactaggctacctgac 18872636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 30733152 - 30733237
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| |||| ||  ||||||||  |||||||  |||||||||||||| |||  | ||||||||||||||||  ||||||||    
T  30733152 tattatatgcagaggtcagggttcgaactccggacactccacttattcacttgaaaaataaatttctagccactaggctacctgac 30733237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 34921145 - 34921093
Alignment:
Q  330 gacatcccacttattcacttta-aaggtgaatttctagccactagattacctga 382  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||    
T  34921145 gacatcccacttattcaccttataagttgaatt-ctagccactagattacctga 34921093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 374
Target Start/End: Original strand, 1572161 - 1572220
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatt--tctagccactaga 374  Q
    |||||||| |||||||  ||||||||||||  |||||||||||||  |||||||||||||    
T  1572161 ggttcgaaccccggactccccacttattcatcttaaaggtgaatttctctagccactaga 1572220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 378
Target Start/End: Complemental strand, 1984237 - 1984170
Alignment:
Q  313 tcgaggttcgaatcccggacatcccacttattcactttaaaggtgaat--ttctagccactagattac 378  Q
    ||||| |||||| ||  |||||||||||||||||  ||||||||||||  ||||||||||||| ||||    
T  1984237 tcgagtttcgaaccctagacatcccacttattcatcttaaaggtgaattcttctagccactaggttac 1984170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 7234935 - 7234860
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactag 373  Q
    |||||||||||||| ||| |||||||| ||| || | |||| |||||||| ||| |||||||| |||||||||||||    
T  7234935 tattatatgtagaggtcggggttcgaaccccagataccccatttattcaccttataaggtgaa-ttctagccactag 7234860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 14574325 - 14574289
Alignment:
Q  272 ttaattcagttggtaagtacaatatatattatatgta 308  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  14574325 ttaactcagttggtaagtacaatatataatatatgta 14574289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 37986930 - 37986853
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttt---aaaggtgaatttctagccactag 373  Q
    ||||||||| |||| |||  ||| ||| |||||||||||||||||||||| ||   ||||||||| |||||||||||||    
T  37986930 tattatatgcagaggtcggagtttgaaccccggacatcccacttattcaccttgaaaaaggtgaa-ttctagccactag 37986853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 398 - 487
Target Start/End: Complemental strand, 18732 - 18642
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcacttttt-ctataattttgtcggcct 487  Q
    ||||||||||||||||||| |||||||| ||| ||| |||||||||| |||||||||||||||| |||||||  | |||||||||||||||    
T  18732 gttgcatctttaaaattgttgataatttaactgatccagatgataatattatcattagaaactttactttttattgtaattttgtcggcct 18642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 5e-20; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 398 - 487
Target Start/End: Complemental strand, 8192157 - 8192067
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcacttttt-ctataattttgtcggcct 487  Q
    ||||||||||||||||||| |||||||| ||| ||| |||||||||| |||||||||||||||| |||||||  | |||||||||||||||    
T  8192157 gttgcatctttaaaattgttgataatttaactgatccagatgataatattatcattagaaactttactttttattgtaattttgtcggcct 8192067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 8690246 - 8690331
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| || | ||| |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  8690246 tattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 8690331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 15640506 - 15640421
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| || ||||| |||||||| | | |||| ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  15640506 tattatatgcagtgttcggggttcgaacctcagacaccccacttattcactttaaaagtgaatttctagccactagactacctgac 15640421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 398 - 470
Target Start/End: Original strand, 54421030 - 54421102
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcactttttc 470  Q
    |||||||||||||||||||||| |||| |||| ||  ||||||||||||| ||||||||||||||||||||||    
T  54421030 gttgcatctttaaaattgtagacaattcgactgattcagatgataattttttcattagaaacttcactttttc 54421102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 9693013 - 9693079
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  9693013 ggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 9693079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 14149844 - 14149910
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  14149844 ggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 14149910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 28520775 - 28520709
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  28520775 ggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 28520709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 48968254 - 48968188
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  48968254 ggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 48968188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 314 - 379
Target Start/End: Original strand, 46799455 - 46799520
Alignment:
Q  314 cgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacc 379  Q
    ||||||||||| |||||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  46799455 cgaggttcgaaccccggacaccccatttattcactttaaaagtgaatttctagccactagactacc 46799520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 53815747 - 53815813
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| |||||||||||||| |||| |||||||||||||||||||  ||||||||    
T  53815747 ggttcgaaccccggacaccccacttattcactataaaagtgaatttctagccactaggctacctgac 53815813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 36954169 - 36954254
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| || | ||| |||||||| |||||||| |||| |||||||||||||| ||||||||||||| |||||  ||||||||    
T  36954169 tattatatgcaggggtcggggttcgaaccccggacaccccatttattcactttaaaagtgaatttctagctactaggctacctgac 36954254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 364
Target Start/End: Complemental strand, 37889682 - 37889603
Alignment:
Q  285 taagtacaatatatattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||| ||||| ||||||||||| || | ||| |||||||| |||||||| | |||||||||||||| |||||||||||||    
T  37889682 taaggacaatgtatattatatgcaggggtcggggttcgaaccccggacacctcacttattcacttttaaggtgaatttct 37889603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 52031258 - 52031313
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccacta 372  Q
    |||||||| ||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  52031258 ggttcgaaccccagacaccccacttattcactttaaaagtgaatttctagccacta 52031313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 27296873 - 27296939
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||| ||||| || |||||||||||||| || ||||||||||||||||| ||||||||    
T  27296873 ggttcgaaccccgaacatctcatttattcactttaaaagtaaatttctagccactagactacctgac 27296939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 40150524 - 40150590
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| | ||||||||||||||||| ||||||||||| ||| |||| ||||||||    
T  40150524 ggttcgaaccccggacacctcacttattcactttaaaagtgaatttctatccattagactacctgac 40150590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 42411516 - 42411441
Alignment:
Q  299 attatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaag-gtgaatttctagccactag 373  Q
    |||||||| || | ||| |||||||| |||||||| |||||||||| ||||||||  |||||||||||||||||||    
T  42411516 attatatgcaggggtcggggttcgaaccccggacaccccacttatttactttaaaaagtgaatttctagccactag 42411441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 34773729 - 34773673
Alignment:
Q  315 gaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccact 371  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  34773729 gaggttcgaaccccggacaccccacttattcactttataaggtgaa-ttctagccact 34773673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 366
Target Start/End: Complemental strand, 7768851 - 7768783
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctag 366  Q
    ||||||||| ||||  || |||||||| |||||||| |||||||||||||||||||  |||| ||||||    
T  7768851 tattatatgcagaggccggggttcgaaccccggacaccccacttattcactttaaaaatgaaattctag 7768783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 11128771 - 11128827
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactag 373  Q
    |||||||| |||| || ||||| ||||||| ||||||||||||||||||||| ||||    
T  11128771 ggttcgaaccccgaacttcccatttattcattttaaaggtgaatttctagccgctag 11128827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 39494251 - 39494195
Alignment:
Q  297 atattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaa 353  Q
    ||||||||||||| |||||  |||||||||| | ||| |||||||||||||||||||    
T  39494251 atattatatgtagggttcggagttcgaatcctgaacaccccacttattcactttaaa 39494195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 383
Target Start/End: Original strand, 46799569 - 46799613
Alignment:
Q  339 cttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||||||||| ||||||||||| |||||||| ||||||||    
T  46799569 cttattcactttaaaagtgaatttctaaccactagactacctgac 46799613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 380
Target Start/End: Original strand, 3465635 - 3465697
Alignment:
Q  318 gttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacct 380  Q
    ||||||| |||||||| ||||||||||||| ||| |||||||| |||||||||||||| |||||    
T  3465635 gttcgaaccccggacaccccacttattcaccttataaggtgaa-ttctagccactagactacct 3465697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 372
Target Start/End: Complemental strand, 6330999 - 6330925
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccacta 372  Q
    |||||||||||| | | | ||||| ||||||||||| ||||||||||||| ||| ||||||||||| |||||||||    
T  6330999 tattatatgtaggggttggggttcaaatcccggacaccccacttattcaccttataaggtgaattt-tagccacta 6330925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 353
Target Start/End: Original strand, 11872905 - 11872960
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaa 353  Q
    |||||||||||| | |||  ||||||| ||||||||||| ||||||||||||||||    
T  11872905 tattatatgtaggggtcggagttcgaaccccggacatcctacttattcactttaaa 11872960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 20610790 - 20610858
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttt---aaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||  ||||||||||||||||||||| ||   ||||||||| |||||||||||||| ||||||||    
T  20610790 ggttcgaactccggacatcccacttattcaccttaaaaaaggtgaa-ttctagccactagactacctgac 20610858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 22525439 - 22525486
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    ||||||||||||||||| ||||||||||||| || ||| |||||||||    
T  22525439 ggttcgaatcccggacaccccacttattcacctttaagatgaatttct 22525486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 380
Target Start/End: Original strand, 33536257 - 33536339
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacct 380  Q
    |||| ||||||| | |||||||||||||| ||||||||| | ||||||| |||| |||||||||||| | |||||||| |||||    
T  33536257 tattttatgtaggggtcgaggttcgaatctcggacatccaatttattcattttataaggtgaatttc-aaccactagactacct 33536339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 38690697 - 38690764
Alignment:
Q  297 atattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||||||||| || | ||| |||||||| |||||||| ||||||||||| | || |||||||||||||    
T  38690697 atattatatgcaggggtcggggttcgaaccccggacaccccacttattctcctttaaggtgaatttct 38690764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 372
Target Start/End: Complemental strand, 52330953 - 52330898
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccacta 372  Q
    ||||||||  ||||||| ||||||||||||||||||| ||||||||| | ||||||    
T  52330953 ggttcgaactccggacaccccacttattcactttaaaagtgaatttccaaccacta 52330898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 54304973 - 54304907
Alignment:
Q  317 ggttcgaatcccggacatcccacttattca-ctttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||||||| |||||||||||||||| |||  |||||||| |||||||||||||  ||||||||    
T  54304973 ggttcgaatcccgaacatcccacttattcagcttataaggtgaa-ttctagccactaggctacctgac 54304907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 372
Target Start/End: Complemental strand, 5909814 - 5909772
Alignment:
Q  330 gacatcccacttattcactttaaaggtgaatttctagccacta 372  Q
    ||||||||||||||||||||||||  |||||||||| ||||||    
T  5909814 gacatcccacttattcactttaaaaatgaatttctaaccacta 5909772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 13073217 - 13073133
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||||||| | ||| |||||||| ||||||||||||||||||| || ||| |||||||| ||||||| |||||  ||||||||    
T  13073217 tattatatgtagggatcggggttcgaa-cccggacatcccacttattaaccttataaggtgaa-ttctagctactaggctacctgac 13073133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 20753188 - 20753103
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||||||| |  || |||||||| |||||||| | ||||||||||| ||| |||||||| |||||||||||||  ||||||||    
T  20753188 tattatatgtaggggccggggttcgaaccccggacaccacacttattcaccttataaggtgaa-ttctagccactaggctacctgac 20753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 22096438 - 22096388
Alignment:
Q  314 cgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||||||||||  ||||||| |||||||||||| ||| |||||||||||||    
T  22096438 cgaggttcgaactccggacaccccacttattcatttttaaggtgaatttct 22096388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 383
Target Start/End: Complemental strand, 55656151 - 55656086
Alignment:
Q  318 gttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||| ||||||||||| || |||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  55656151 gttcaaatcccggacaccctacttattcaccttataagatgaatt-ctagccactagattacctgac 55656086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 383
Target Start/End: Original strand, 31578070 - 31578134
Alignment:
Q  319 ttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||| |||||||| ||||||||||||| ||| |||||||| |||||||||||||  ||||||||    
T  31578070 ttcgaaacccggacaccccacttattcacattataaggtgaa-ttctagccactaggctacctgac 31578134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 36257745 - 36257801
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttt-aaaggtgaatttctagccactag 373  Q
    |||||||| |||||||| |||||||||||||||| ||| ||||| |||||||||||||    
T  36257745 ggttcgaaccccggacaccccacttattcactttaaaaagtgaa-ttctagccactag 36257801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 44074905 - 44074950
Alignment:
Q  318 gttcgaatcccggacatcccacttattcacttta-aaggtgaattt 362  Q
    |||||||||||||||| ||||||||||||| ||| |||||||||||    
T  44074905 gttcgaatcccggacaccccacttattcaccttataaggtgaattt 44074950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 46206650 - 46206695
Alignment:
Q  328 cggacatcccacttattcactttaa-aggtgaatttctagccacta 372  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||    
T  46206650 cggacaccccacttattcaccttaagaggtgaatttctagccacta 46206695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 51298759 - 51298690
Alignment:
Q  264 ccgtgaatttaattcagttggtaagtacaatatatattatatgtagagttcgaggttcgaatcccggaca 333  Q
    ||||||| |||| ||||||| |||| |||||||||| |||||| |  ||||| |||| ||||||||||||    
T  51298759 ccgtgaacttaactcagttgataaggacaatatataatatatgcaaggttcggggtttgaatcccggaca 51298690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 365
Target Start/End: Original strand, 9759422 - 9759470
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttcta 365  Q
    |||||||||||| |||| ||||||||||| | || ||||||||||||||    
T  9759422 ggttcgaatcccagacaccccacttattctccttcaaggtgaatttcta 9759470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 12868073 - 12868041
Alignment:
Q  315 gaggttcgaatcccggacatcccacttattcac 347  Q
    ||||||||||||||| |||||||||||||||||    
T  12868073 gaggttcgaatcccgaacatcccacttattcac 12868041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 346
Target Start/End: Original strand, 43336993 - 43337041
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattca 346  Q
    |||||||||||| | ||| ||||||||||||| ||| ||||||||||||    
T  43336993 tattatatgtagggatcggggttcgaatcccgaacaccccacttattca 43337041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 383
Target Start/End: Complemental strand, 48501684 - 48501636
Alignment:
Q  335 cccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||||||||||||| ||||||| ||| ||| |||| ||||||||    
T  48501684 cccacttattcactttaaaagtgaattcctaaccagtagactacctgac 48501636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 4850 - 4794
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactag 373  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  4850 ggttcgaatcccggacaccccacttattcactttaaaagtgaatttctagccactag 4794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 60656 - 60723
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcact 465  Q
    ||||||| || |||||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  60656 gttgcatattcaaaattgtagataatttgactaatcgggatgataattttttcattagaaacttcact 60723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 2800070 - 2800136
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  2800070 ggttcgaaccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 2800136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 35301226 - 35301141
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| || | ||| ||||||||  ||||||| || |||||||||||||||| |||||||||||||||||||| ||||||||    
T  35301226 tattatatgcaggggtcggggttcgaactccggacaccctacttattcactttaaaagtgaatttctagccactagactacctgac 35301141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 383
Target Start/End: Original strand, 10292405 - 10292469
Alignment:
Q  319 ttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||| | |||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  10292405 ttcgaacctcggacaccccacttattcactttaaaagtgaatttctagccactagactacctgac 10292469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 31129353 - 31129419
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||| ||||||||||  ||||||||    
T  31129353 ggttcgaaccccggacaccccacttattcactttaaaagtgaatttttagccactaggctacctgac 31129419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 35253867 - 35253802
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  35253867 ggttcgaatcc-ggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 35253802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 383
Target Start/End: Original strand, 10310338 - 10310399
Alignment:
Q  322 gaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| |||| || |||||    
T  10310338 gaatcccggacaccccacttattcactttaaaagtgaatttctagccattagactatctgac 10310399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 43508492 - 43508436
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactag 373  Q
    |||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  43508492 ggtttgaaccccggacaccccacttattcaccttaaaggtgaatttctagccactag 43508436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 1588818 - 1588873
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccacta 372  Q
    |||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||    
T  1588818 ggttcgaacctcggacaccccacttattcactttaaaagtgaatttctagccacta 1588873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 373
Target Start/End: Original strand, 7314781 - 7314840
Alignment:
Q  314 cgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactag 373  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||||||| |||| ||||||    
T  7314781 cgaggttcgaaccccggacaccccacttattcactttaaaagtgaattcctagtcactag 7314840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 2696584 - 2696650
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| ||||||||||||||||||| ||||||||||  |||||||  ||||||||    
T  2696584 ggttcgaaccccggacaccccacttattcactttaaaagtgaatttctgaccactaggctacctgac 2696650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 383
Target Start/End: Complemental strand, 36359761 - 36359696
Alignment:
Q  318 gttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||||||||||| ||||||||||||| ||| |||||||| |||||||||||||| ||||||||    
T  36359761 gttcgaatcccggacaccccacttattcaccttataaggtgaa-ttctagccactagactacctgac 36359696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 38790616 - 38790550
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| ||| |||| ||||||||||||||||||| |||||||||||| ||||||  ||||||||    
T  38790616 ggttcgaaccccagacaccccacttattcactttaaaagtgaatttctaggcactaggctacctgac 38790550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 313 - 383
Target Start/End: Complemental strand, 42762078 - 42762010
Alignment:
Q  313 tcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| ||||||||||| ||||||||||||| || |||||||| |||||||||||||| ||||||||    
T  42762078 tcgaggttcaaatcccggacaccccacttattcacctt-aaggtgaa-ttctagccactagactacctgac 42762010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 14683927 - 14683993
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||||||||||||||||| ||| |||||||| |||||| ||||||| ||||||||    
T  14683927 ggttcgaaccccggacatcccacttattcaccttataaggtgaa-ttctagtcactagactacctgac 14683993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 364
Target Start/End: Complemental strand, 19957385 - 19957318
Alignment:
Q  297 atattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||||||||| || |  ||||||||||| |||||||| ||||||||||||| || |||||||||||||    
T  19957385 atattatatgcaggggacgaggttcgaaccccggacaccccacttattcacctttaaggtgaatttct 19957318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 380
Target Start/End: Complemental strand, 34073302 - 34073220
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacct 380  Q
    |||||||||||| | || ||||||||| |||||||| ||||||||||||| ||| |||||||| |||||||||| ||| |||||    
T  34073302 tattatatgtaggggtcaaggttcgaaccccggacaccccacttattcaccttataaggtgaa-ttctagccacgagactacct 34073220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 469
Target Start/End: Complemental strand, 40147526 - 40147455
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcacttttt 469  Q
    ||||||| ||||||||||| |||||||| | | ||  || |||||||||||||||||||||||||| |||||    
T  40147526 gttgcatttttaaaattgttgataatttaaatgattcaggtgataattttatcattagaaacttcatttttt 40147455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 31373352 - 31373437
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||||||| |   ||||||||||||||||||||||||  ||||||| ||| |||||||| |||||||||||||| || |||||    
T  31373352 tattatatgtaggggcagaggttcgaatcccggacatcccatatattcaccttataaggtgaa-ttctagccactagactagctgac 31373437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 18009778 - 18009693
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| || || || ||||||||||||| | |   ||||||||||||||||| ||||||||||||||| |||  ||||||||    
T  18009778 tattatatgcagggtccggggttcgaatcccgaatacttcacttattcactttaaaagtgaatttctagccattaggctacctgac 18009693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 22426433 - 22426518
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||||||| | | |||||||||| ||| |||| |||| |||||||||||||| |||||||  || |||||||  ||||||||    
T  22426433 tattatatgtaggggttgaggttcgaacccctgacaccccatttattcactttaaaagtgaattcttaaccactaggctacctgac 22426518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 39165031 - 39165088
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaa-aggtgaatttctagccactag 373  Q
    ||||||||  ||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  39165031 ggttcgaacaccggacaccccacttattcaccttaagaggtgaatttctagccactag 39165088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 487
Target Start/End: Original strand, 14139435 - 14139523
Alignment:
Q  400 tgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcacttttt-ctataattttgtcggcct 487  Q
    ||||||||||||||||| || ||||| ||| ||    |||||||||||||||||| || |||||||||||  | |||||||||||||||    
T  14139435 tgcatctttaaaattgttgacaatttaactgattcgtatgataattttatcattaaaagcttcactttttagtgtaattttgtcggcct 14139523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 361
Target Start/End: Complemental strand, 41125496 - 41125432
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatt 361  Q
    |||||||||||| | |||| |||||||  ||||||||||||||||||||| ||| ||||||||||    
T  41125496 tattatatgtaggggtcgaagttcgaagtccggacatcccacttattcaccttataaggtgaatt 41125432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 4798585 - 4798519
Alignment:
Q  317 ggttcgaatcccggacatcccacttattca-ctttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| |||||||||||| |||  |||||||| |||||||||||||| ||||||||    
T  4798585 ggttcgaaccccggacaccccacttattcaccttgtaaggtgaa-ttctagccactagactacctgac 4798519  T

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Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 372
Target Start/End: Original strand, 5323954 - 5324028
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccacta 372  Q
    ||||||||| || | ||| |||||||| |||||||  | || |||||||||||||| ||||||||||| ||||||    
T  5323954 tattatatgcaggggtcggggttcgaaccccggactcctcagttattcactttaaaagtgaatttctaaccacta 5324028  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 32822167 - 32822213
Alignment:
Q  318 gttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    ||||||| ||| ||||||||||| ||||||||| |||||||||||||    
T  32822167 gttcgaaccccagacatcccactcattcacttttaaggtgaatttct 32822213  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 33524428 - 33524513
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| ||||  || |||||||| |||||||| |||||||||||||| || ||||| ||||| ||||||||| | ||||||||    
T  33524428 tattatatgcagagaccggggttcgaaccccggacaccccacttattcactctataaggttaattt-tagccactaaactacctgac 33524513  T

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Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 43468766 - 43468693
Alignment:
Q  300 ttatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactag 373  Q
    |||||||||| | ||| ||||||||  ||||||| ||||||||||||| ||| |||||||| |||||||||||||    
T  43468766 ttatatgtaggggtcggggttcgaactccggacaccccacttattcaccttataaggtgaa-ttctagccactag 43468693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 364
Target Start/End: Complemental strand, 39172271 - 39172210
Alignment:
Q  303 tatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||||||||  ||| |||||||||||||||| |||| |||||||| || || ||||||||||    
T  39172271 tatgtagaggccgaagttcgaatcccggacaccccatttattcacctttaaagtgaatttct 39172210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 383
Target Start/End: Complemental strand, 220423 - 220338
Alignment:
Q  300 ttatatgtagagttcgaggttcgaatcccggacatcccacttattcacttt---aaaggtgaatttctagccactagattacctgac 383  Q
    ||||||| |||| ||  ||||||||||||||||| ||||||||||||| ||   ||||||||| ||||| |||||||| ||| ||||    
T  220423 ttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaa-ttctaaccactagactacttgac 220338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 383
Target Start/End: Complemental strand, 689578 - 689493
Alignment:
Q  300 ttatatgtagagttcgaggttcgaatcccggacatcccacttattcacttt---aaaggtgaatttctagccactagattacctgac 383  Q
    ||||||| |||| ||  ||||||||||||||||| ||||||||||||| ||   ||||||||| ||||| |||||||| ||| ||||    
T  689578 ttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaa-ttctaaccactagactacttgac 689493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 383
Target Start/End: Complemental strand, 734046 - 733961
Alignment:
Q  300 ttatatgtagagttcgaggttcgaatcccggacatcccacttattcacttt---aaaggtgaatttctagccactagattacctgac 383  Q
    ||||||| |||| ||  ||||||||||||||||| ||||||||||||| ||   ||||||||| ||||| |||||||| ||| ||||    
T  734046 ttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaa-ttctaaccactagactacttgac 733961  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 383
Target Start/End: Complemental strand, 857942 - 857857
Alignment:
Q  300 ttatatgtagagttcgaggttcgaatcccggacatcccacttattcacttt---aaaggtgaatttctagccactagattacctgac 383  Q
    ||||||| |||| ||  ||||||||||||||||| ||||||||||||| ||   ||||||||| ||||| |||||||| ||| ||||    
T  857942 ttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaa-ttctaaccactagactacttgac 857857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 481
Target Start/End: Original strand, 12619869 - 12619917
Alignment:
Q  434 tagatgataattttatcattagaaacttcacttttt-ctataattttgt 481  Q
    |||| ||||||||||||| |||||||||||||||||  |||||||||||    
T  12619869 tagaagataattttatcactagaaacttcactttttagtataattttgt 12619917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 346
Target Start/End: Complemental strand, 12926541 - 12926493
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattca 346  Q
    |||||||||||| || || ||||||||||||||||| | ||||||||||    
T  12926541 tattatatgtagtgtccggggttcgaatcccggacacctcacttattca 12926493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 383
Target Start/End: Original strand, 23239158 - 23239241
Alignment:
Q  300 ttatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||||| | ||| |||| ||| |||||||| ||||||||||||| ||| || |||||||| || |||||||| ||||||||    
T  23239158 ttatatgtaggggtcggggtttgaaccccggacaccccacttattcaccttataaagtgaattt-taaccactagactacctgac 23239241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 33155333 - 33155392
Alignment:
Q  318 gttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattac 378  Q
    ||||||||||| ||||   ||||||||||| |||||||||||||| || ||||||||||||    
T  33155333 gttcgaatcccagacacgacacttattcaccttaaaggtgaattt-taaccactagattac 33155392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 33820448 - 33820392
Alignment:
Q  308 agagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttct 364  Q
    |||| ||| |||||||||||| |||| |||| |||||||  ||||||||||||||||    
T  33820448 agaggtcggggttcgaatcccagacaccccaattattcatcttaaaggtgaatttct 33820392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 7127 - 7193
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||||||| |||| |||||||||||||| |||||||||||||||||||  ||||||||    
T  7127 ggttcgaaccccggacaccccatttattcactttaaaagtgaatttctagccactaggctacctgac 7193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 469
Target Start/End: Complemental strand, 2820 - 2749
Alignment:
Q  398 gttgcatctttaaaattgtagataatttgactaatctagatgataattttatcattagaaacttcacttttt 469  Q
    ||||||||||||||||| | |||||||||| | ||| | || ||||||||||||||| ||||||||||||||    
T  2820 gttgcatctttaaaatttttgataatttgattgatccaaattataattttatcattacaaacttcacttttt 2749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 21901 - 21965
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||| |||| ||| |||||||||||||||||||  ||||||||||||||||||| ||||||||    
T  21901 ggttcgaa-cccgaacaccccacttattcactttaaaa-tgaatttctagccactagactacctgac 21965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 362
Target Start/End: Original strand, 22485 - 22555
Alignment:
Q  292 aatatatattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaattt 362  Q
    |||| ||||||||||||| |   |||||||||| ||| ||||||||||||||||| ||| |||||||||||    
T  22485 aatacatattatatgtaggggctgaggttcgaaccccagacatcccacttattcatttttaaggtgaattt 22555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1990 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 945 - 1011
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||||||| |||| ||||||||||||| ||| |||||||| |||||||||||||| || |||||    
T  945 ggttcgaatcccagacaccccacttattcaccttataaggtgaa-ttctagccactagaatatctgac 1011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 380
Target Start/End: Original strand, 4355 - 4437
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacct 380  Q
    ||||||||| || | ||| |||||||| ||||||||  |||||||||||||||| |||||||| |||||| ||||||| |||||    
T  4355 tattatatgcaggggtcggggttcgaaccccggacactccacttattcactttataaggtgaa-ttctagacactagactacct 4437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 47361 - 47295
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    |||||||||||| |||| ||||||||||||| ||| |||||||| |||||||||||||| || |||||    
T  47361 ggttcgaatcccagacaccccacttattcaccttataaggtgaa-ttctagccactagaatatctgac 47295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1086 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 2520 - 2605
Alignment:
Q  298 tattatatgtagagttcgaggttcgaatcccggacatcccacttattcacttta-aaggtgaatttctagccactagattacctgac 383  Q
    ||||||||| |||| | || ||| ||| |||||||| ||||||||||||| ||| |||||||| ||| |||||||||| ||||||||    
T  2520 tattatatgcagaggttgaagtttgaaccccggacaccccacttattcaccttataaggtgaa-ttccagccactagactacctgac 2605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 17975 - 17913
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagccactagattacc 379  Q
    |||||||| ||| ||||  ||||||||||||||||||  |||||| |||||||||||| ||||    
T  17975 ggttcgaaccccagacactccacttattcactttaaaattgaattcctagccactagactacc 17913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 37361 - 37438
Alignment:
Q  290 acaatatatattatatgtagagttcgaggttcgaatcccggacatcccacttattcactttaaaggtgaatttctagc 367  Q
    |||||||||| |||||| |||| | ||| ||||||  |||||||  |||||||||||| ||||| |||||||| ||||    
T  37361 acaatatataatatatgcagaggttgagattcgaagtccggacactccacttattcaccttaaatgtgaatttttagc 37438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 383
Target Start/End: Original strand, 31233 - 31277
Alignment:
Q  338 acttattcactttaaaggtgaatttctagccactagattacctgac 383  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||    
T  31233 acttattcactttaaaagtgaattt-tagccactagactacctgac 31277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 350
Target Start/End: Complemental strand, 270782 - 270749
Alignment:
Q  317 ggttcgaatcccggacatcccacttattcacttt 350  Q
    |||||||||||||||||||||||||| |||||||    
T  270782 ggttcgaatcccggacatcccacttactcacttt 270749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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