View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11271_low_47 (Length: 228)

Name: NF11271_low_47
Description: NF11271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11271_low_47
NF11271_low_47
[»] chr6 (59 HSPs)
chr6 (21-228)||(19701974-19702181)
chr6 (59-228)||(17694963-17695131)
chr6 (59-228)||(22351964-22352132)
chr6 (76-228)||(17035974-17036125)
chr6 (59-228)||(13467576-13467743)
chr6 (59-228)||(22342913-22343081)
chr6 (67-228)||(33215737-33215897)
chr6 (89-228)||(12166258-12166397)
chr6 (59-228)||(25466011-25466179)
chr6 (76-228)||(13878646-13878797)
chr6 (76-228)||(13883394-13883545)
chr6 (76-228)||(16785838-16785989)
chr6 (56-228)||(26643075-26643246)
chr6 (56-228)||(26749041-26749212)
chr6 (76-228)||(26887336-26887487)
chr6 (76-228)||(31248826-31248977)
chr6 (76-228)||(35201438-35201589)
chr6 (59-220)||(3577635-3577794)
chr6 (66-220)||(25941554-25941705)
chr6 (52-227)||(5165928-5166102)
chr6 (59-196)||(24542818-24542953)
chr6 (59-189)||(7293839-7293966)
chr6 (69-188)||(6843178-6843290)
chr6 (64-228)||(11138345-11138510)
chr6 (161-219)||(11983149-11983208)
chr6 (161-219)||(14458887-14458946)
chr6 (161-219)||(14507295-14507354)
chr6 (84-219)||(15719707-15719836)
chr6 (161-219)||(26065118-26065177)
chr6 (161-219)||(26085087-26085146)
chr6 (21-71)||(12166389-12166439)
chr6 (63-196)||(17904495-17904633)
chr6 (64-228)||(22858066-22858223)
chr6 (85-219)||(4816351-4816483)
chr6 (64-196)||(30443342-30443465)
chr6 (70-228)||(7542494-7542656)
chr6 (161-228)||(26945278-26945346)
chr6 (66-138)||(30445562-30445633)
chr6 (161-219)||(19227528-19227587)
chr6 (64-196)||(3027998-3028123)
chr6 (161-218)||(28241442-28241500)
chr6 (161-220)||(30967336-30967396)
chr6 (161-219)||(2629005-2629064)
chr6 (161-219)||(30728948-30729007)
chr6 (166-228)||(11262596-11262658)
chr6 (64-219)||(16455546-16455696)
chr6 (85-219)||(25477336-25477468)
chr6 (161-228)||(12186184-12186252)
chr6 (141-219)||(15532801-15532878)
chr6 (161-219)||(1230369-1230428)
chr6 (161-219)||(13057329-13057388)
chr6 (84-134)||(15346444-15346495)
chr6 (161-219)||(30034723-30034782)
chr6 (161-219)||(32280131-32280190)
chr6 (195-228)||(3577601-3577634)
chr6 (128-189)||(12911598-12911659)
chr6 (64-132)||(17012085-17012153)
chr6 (161-217)||(22490775-22490832)
chr6 (195-228)||(25941706-25941739)
[»] chr4 (87 HSPs)
chr4 (17-228)||(4558170-4558381)
chr4 (17-228)||(47566352-47566563)
chr4 (21-228)||(36771259-36771466)
chr4 (59-228)||(18586868-18587036)
chr4 (21-228)||(36769342-36769549)
chr4 (59-228)||(8529169-8529337)
chr4 (52-228)||(25699644-25699819)
chr4 (52-228)||(16489244-16489419)
chr4 (59-228)||(31300326-31300494)
chr4 (52-228)||(4569989-4570164)
chr4 (59-228)||(4556171-4556339)
chr4 (59-228)||(15316860-15317028)
chr4 (66-228)||(15312225-15312386)
chr4 (59-228)||(15831043-15831211)
chr4 (52-228)||(13072093-13072268)
chr4 (52-228)||(16638721-16638897)
chr4 (59-228)||(4884776-4884944)
chr4 (59-228)||(16689052-16689220)
chr4 (85-228)||(7050369-7050511)
chr4 (76-228)||(11853468-11853619)
chr4 (76-228)||(55822184-55822335)
chr4 (83-193)||(26557664-26557773)
chr4 (68-196)||(25614064-25614191)
chr4 (88-228)||(5336894-5337035)
chr4 (64-228)||(16185947-16186110)
chr4 (59-228)||(3982289-3982457)
chr4 (66-196)||(4874623-4874752)
chr4 (64-228)||(9022367-9022525)
chr4 (66-155)||(32274087-32274174)
chr4 (64-228)||(10112932-10113090)
chr4 (83-219)||(18534953-18535084)
chr4 (64-219)||(19322756-19322906)
chr4 (161-219)||(5637585-5637644)
chr4 (161-219)||(8631539-8631598)
chr4 (161-219)||(22044510-22044569)
chr4 (161-219)||(22046805-22046864)
chr4 (161-219)||(22132511-22132570)
chr4 (161-219)||(22802854-22802913)
chr4 (161-219)||(24348372-24348431)
chr4 (64-221)||(28453747-28453897)
chr4 (161-219)||(36921613-36921672)
chr4 (161-219)||(38409359-38409418)
chr4 (161-219)||(51015400-51015459)
chr4 (64-196)||(18537619-18537744)
chr4 (141-219)||(47868537-47868614)
chr4 (161-219)||(3824690-3824749)
chr4 (161-219)||(7941477-7941536)
chr4 (161-219)||(9148407-9148466)
chr4 (64-228)||(9863770-9863928)
chr4 (161-219)||(36919704-36919763)
chr4 (161-219)||(37089491-37089550)
chr4 (161-219)||(40091535-40091594)
chr4 (161-219)||(47210872-47210931)
chr4 (161-219)||(47274880-47274939)
chr4 (64-138)||(52043579-52043652)
chr4 (161-206)||(2485006-2485051)
chr4 (161-220)||(6764998-6765058)
chr4 (161-219)||(11006356-11006416)
chr4 (161-219)||(11008685-11008745)
chr4 (141-219)||(22800982-22801059)
chr4 (161-219)||(17662365-17662424)
chr4 (161-219)||(22134736-22134795)
chr4 (161-219)||(24888950-24889009)
chr4 (161-219)||(48486473-48486532)
chr4 (64-138)||(38208880-38208953)
chr4 (64-228)||(47151006-47151162)
chr4 (64-138)||(54906636-54906709)
chr4 (89-138)||(5516453-5516501)
chr4 (161-217)||(31849720-31849777)
chr4 (164-228)||(40999062-40999127)
chr4 (161-228)||(31983640-31983708)
chr4 (107-219)||(37313186-37313294)
chr4 (161-219)||(2891445-2891504)
chr4 (161-219)||(6133026-6133085)
chr4 (161-219)||(11435109-11435168)
chr4 (161-219)||(12395965-12396024)
chr4 (161-219)||(13544113-13544172)
chr4 (161-219)||(13547308-13547367)
chr4 (161-219)||(24879143-24879202)
chr4 (161-219)||(24880605-24880664)
chr4 (161-219)||(26086096-26086155)
chr4 (108-138)||(10114435-10114465)
chr4 (161-218)||(38890347-38890405)
chr4 (161-228)||(12102240-12102308)
chr4 (161-220)||(14787550-14787610)
chr4 (161-220)||(18709282-18709342)
chr4 (162-206)||(25357791-25357835)
[»] chr8 (53 HSPs)
chr8 (35-228)||(33032532-33032724)
chr8 (59-228)||(590696-590864)
chr8 (35-228)||(17799536-17799728)
chr8 (59-228)||(9021219-9021387)
chr8 (59-228)||(23179673-23179841)
chr8 (66-228)||(28895411-28895572)
chr8 (59-225)||(29554900-29555065)
chr8 (59-228)||(21033772-21033939)
chr8 (52-228)||(2267135-2267311)
chr8 (76-228)||(16752634-16752785)
chr8 (76-228)||(28327827-28327978)
chr8 (59-228)||(3276246-3276414)
chr8 (52-228)||(30423106-30423283)
chr8 (76-228)||(16757379-16757530)
chr8 (35-228)||(26268344-26268534)
chr8 (76-228)||(4812599-4812750)
chr8 (83-228)||(28332557-28332701)
chr8 (76-228)||(25684562-25684713)
chr8 (59-228)||(15949436-15949605)
chr8 (83-228)||(17847604-17847749)
chr8 (66-226)||(28228423-28228583)
chr8 (66-228)||(31573838-31573993)
chr8 (59-154)||(15944775-15944869)
chr8 (83-228)||(6376067-6376212)
chr8 (161-219)||(14807907-14807966)
chr8 (161-219)||(22684776-22684835)
chr8 (161-219)||(27829453-27829512)
chr8 (161-219)||(44721000-44721059)
chr8 (141-225)||(13985193-13985278)
chr8 (64-219)||(27911076-27911229)
chr8 (64-219)||(27957495-27957648)
chr8 (161-219)||(608890-608949)
chr8 (161-219)||(3874166-3874225)
chr8 (161-219)||(27827142-27827201)
chr8 (161-219)||(28251687-28251746)
chr8 (161-219)||(43530271-43530330)
chr8 (66-138)||(31035133-31035206)
chr8 (161-220)||(31162365-31162425)
chr8 (161-228)||(31578390-31578458)
chr8 (161-219)||(18810864-18810923)
chr8 (161-219)||(18813038-18813097)
chr8 (105-187)||(33839075-33839162)
chr8 (141-219)||(15809356-15809433)
chr8 (83-158)||(33021079-33021155)
chr8 (161-219)||(14419311-14419370)
chr8 (161-219)||(27107017-27107076)
chr8 (161-196)||(30480647-30480682)
chr8 (161-219)||(32339465-32339524)
chr8 (161-218)||(1225322-1225380)
chr8 (141-195)||(11701102-11701155)
chr8 (163-219)||(14477434-14477491)
chr8 (141-219)||(15072848-15072926)
chr8 (161-220)||(28283338-28283398)
[»] chr1 (62 HSPs)
chr1 (36-227)||(4144796-4144986)
chr1 (52-228)||(25133966-25134141)
chr1 (59-228)||(9526368-9526536)
chr1 (59-228)||(21353458-21353626)
chr1 (55-228)||(2393394-2393566)
chr1 (66-228)||(9521624-9521785)
chr1 (76-228)||(2232516-2232667)
chr1 (92-228)||(2401333-2401468)
chr1 (52-228)||(3091218-3091394)
chr1 (52-228)||(14996935-14997110)
chr1 (59-228)||(46783045-46783215)
chr1 (66-228)||(28279277-28279433)
chr1 (64-228)||(27916505-27916662)
chr1 (69-225)||(14352970-14353132)
chr1 (161-219)||(2617616-2617675)
chr1 (161-219)||(28840780-28840839)
chr1 (161-219)||(51750139-51750198)
chr1 (64-219)||(42922239-42922389)
chr1 (108-219)||(15669516-15669621)
chr1 (161-220)||(15294955-15295015)
chr1 (58-152)||(20566857-20566947)
chr1 (161-227)||(155806-155873)
chr1 (161-219)||(20291557-20291616)
chr1 (161-219)||(21948310-21948369)
chr1 (161-219)||(24325763-24325822)
chr1 (161-219)||(46431829-46431888)
chr1 (64-196)||(49959047-49959183)
chr1 (161-219)||(51757631-51757690)
chr1 (64-228)||(30738744-30738901)
chr1 (85-219)||(48665204-48665337)
chr1 (64-136)||(13127832-13127905)
chr1 (141-220)||(16428735-16428813)
chr1 (166-228)||(13125572-13125635)
chr1 (161-219)||(13761937-13761996)
chr1 (86-228)||(13785383-13785531)
chr1 (161-219)||(17324758-17324817)
chr1 (161-219)||(28842595-28842654)
chr1 (161-219)||(31735643-31735702)
chr1 (161-219)||(39462619-39462678)
chr1 (161-219)||(4131502-4131560)
chr1 (141-219)||(6115225-6115302)
chr1 (141-219)||(38925600-38925677)
chr1 (141-219)||(47906352-47906429)
chr1 (161-219)||(10399950-10400009)
chr1 (161-219)||(12302627-12302686)
chr1 (161-219)||(13215181-13215240)
chr1 (83-196)||(14183738-14183845)
chr1 (161-219)||(15823646-15823705)
chr1 (161-219)||(18307209-18307268)
chr1 (161-219)||(20302559-20302618)
chr1 (161-219)||(25251397-25251456)
chr1 (161-219)||(27337061-27337120)
chr1 (70-133)||(37990682-37990744)
chr1 (161-219)||(39932173-39932232)
chr1 (161-219)||(50076794-50076853)
chr1 (161-219)||(50307668-50307727)
chr1 (161-219)||(51752465-51752523)
chr1 (64-134)||(26332763-26332831)
chr1 (162-219)||(27339252-27339310)
chr1 (85-219)||(50078943-50079075)
chr1 (141-196)||(14098116-14098169)
chr1 (161-228)||(26613354-26613422)
[»] chr3 (96 HSPs)
chr3 (21-228)||(3329756-3329963)
chr3 (59-228)||(10896907-10897075)
chr3 (59-228)||(29914065-29914233)
chr3 (59-228)||(47878283-47878451)
chr3 (59-228)||(10612890-10613058)
chr3 (52-228)||(47882994-47883169)
chr3 (59-228)||(54193127-54193296)
chr3 (64-228)||(27762098-27762261)
chr3 (59-228)||(5858448-5858614)
chr3 (48-228)||(38002760-38002939)
chr3 (59-225)||(22626099-22626264)
chr3 (52-228)||(10595146-10595321)
chr3 (52-228)||(10949372-10949546)
chr3 (64-228)||(11079424-11079587)
chr3 (59-228)||(54188410-54188579)
chr3 (66-228)||(16462112-16462273)
chr3 (83-228)||(20031430-20031574)
chr3 (76-228)||(10094186-10094337)
chr3 (76-228)||(10201066-10201217)
chr3 (76-228)||(10100203-10100354)
chr3 (76-228)||(10208112-10208263)
chr3 (59-228)||(4535516-4535684)
chr3 (76-228)||(6303229-6303380)
chr3 (76-228)||(27544192-27544343)
chr3 (52-228)||(13893356-13893532)
chr3 (66-228)||(16996784-16996945)
chr3 (52-228)||(7417964-7418134)
chr3 (59-226)||(26762941-26763108)
chr3 (64-228)||(46966760-46966923)
chr3 (66-159)||(15823791-15823882)
chr3 (59-115)||(48390444-48390500)
chr3 (66-172)||(27703338-27703443)
chr3 (64-228)||(36871411-36871570)
chr3 (161-219)||(4104013-4104072)
chr3 (161-219)||(5191733-5191792)
chr3 (161-219)||(5522744-5522803)
chr3 (161-219)||(7606705-7606764)
chr3 (161-219)||(18097018-18097077)
chr3 (161-219)||(18099288-18099347)
chr3 (161-219)||(42990384-42990443)
chr3 (161-219)||(43226165-43226224)
chr3 (161-219)||(43228371-43228430)
chr3 (64-219)||(31151334-31151484)
chr3 (83-226)||(1620573-1620709)
chr3 (107-219)||(1321510-1321618)
chr3 (161-219)||(3859608-3859667)
chr3 (161-219)||(4308399-4308458)
chr3 (64-191)||(7768559-7768680)
chr3 (161-219)||(10084507-10084566)
chr3 (84-219)||(13420304-13420433)
chr3 (161-219)||(22114423-22114482)
chr3 (161-219)||(25688279-25688338)
chr3 (161-219)||(45883019-45883078)
chr3 (84-219)||(25635390-25635520)
chr3 (162-219)||(26720628-26720686)
chr3 (164-219)||(10956145-10956201)
chr3 (66-138)||(13419872-13419943)
chr3 (161-220)||(18162743-18162803)
chr3 (68-219)||(23633449-23633593)
chr3 (141-219)||(39715531-39715608)
chr3 (161-219)||(6561890-6561949)
chr3 (161-219)||(11168181-11168240)
chr3 (161-219)||(11170484-11170543)
chr3 (161-219)||(25533522-25533581)
chr3 (161-219)||(29956766-29956825)
chr3 (161-219)||(30005921-30005980)
chr3 (161-219)||(38890120-38890179)
chr3 (161-219)||(51727125-51727184)
chr3 (64-219)||(23637012-23637162)
chr3 (68-138)||(27420644-27420713)
chr3 (105-225)||(11066610-11066737)
chr3 (161-217)||(32264159-32264216)
chr3 (64-131)||(561977-562044)
chr3 (108-214)||(1674006-1674106)
chr3 (55-138)||(23941726-23941810)
chr3 (161-220)||(27101298-27101358)
chr3 (164-219)||(53915614-53915670)
chr3 (161-219)||(1313489-1313548)
chr3 (161-219)||(5926882-5926941)
chr3 (161-219)||(9604725-9604784)
chr3 (161-219)||(10958441-10958500)
chr3 (161-219)||(12268082-12268141)
chr3 (161-219)||(15780951-15781010)
chr3 (84-138)||(25633929-25633984)
chr3 (65-180)||(31021303-31021411)
chr3 (104-158)||(42297838-42297895)
chr3 (161-219)||(43423581-43423640)
chr3 (161-219)||(53917782-53917841)
chr3 (161-219)||(889891-889949)
chr3 (141-217)||(1626803-1626878)
chr3 (161-219)||(6231881-6231939)
chr3 (161-219)||(10191428-10191486)
chr3 (163-219)||(28102120-28102177)
chr3 (161-220)||(561894-561954)
chr3 (161-228)||(14634552-14634620)
chr3 (196-228)||(48390414-48390446)
[»] chr7 (74 HSPs)
chr7 (52-228)||(25410025-25410200)
chr7 (52-228)||(25351248-25351423)
chr7 (52-228)||(25356942-25357117)
chr7 (27-228)||(21369510-21369712)
chr7 (52-228)||(44016773-44016949)
chr7 (59-228)||(30246872-30247040)
chr7 (52-228)||(44143978-44144153)
chr7 (66-228)||(8378616-8378777)
chr7 (59-221)||(34546982-34547143)
chr7 (59-228)||(42006565-42006733)
chr7 (52-228)||(44010862-44011038)
chr7 (59-228)||(44512637-44512805)
chr7 (59-227)||(7464632-7464798)
chr7 (66-228)||(2120807-2120969)
chr7 (76-228)||(7069699-7069850)
chr7 (76-228)||(7074706-7074857)
chr7 (76-228)||(25405312-25405463)
chr7 (76-228)||(15541107-15541258)
chr7 (77-228)||(3320162-3320312)
chr7 (77-228)||(3324910-3325060)
chr7 (52-228)||(6067312-6067488)
chr7 (73-187)||(1099587-1099700)
chr7 (64-228)||(6048890-6049048)
chr7 (104-196)||(12310160-12310245)
chr7 (64-228)||(11081527-11081684)
chr7 (64-219)||(24817474-24817623)
chr7 (85-219)||(11757266-11757399)
chr7 (85-219)||(20299496-20299629)
chr7 (161-219)||(1047044-1047103)
chr7 (161-219)||(20626148-20626207)
chr7 (161-219)||(20630039-20630098)
chr7 (161-219)||(20642458-20642517)
chr7 (84-196)||(22392501-22392606)
chr7 (161-219)||(38394096-38394155)
chr7 (161-219)||(48457763-48457822)
chr7 (85-219)||(24813619-24813747)
chr7 (68-228)||(26210565-26210719)
chr7 (85-219)||(7470142-7470274)
chr7 (85-219)||(7472100-7472232)
chr7 (64-217)||(7188558-7188706)
chr7 (141-227)||(16297137-16297222)
chr7 (161-220)||(31435166-31435226)
chr7 (66-196)||(45366550-45366671)
chr7 (161-219)||(35739-35798)
chr7 (161-219)||(1049415-1049474)
chr7 (64-219)||(1849996-1850150)
chr7 (161-219)||(3878687-3878746)
chr7 (161-219)||(27306350-27306409)
chr7 (161-219)||(40836862-40836921)
chr7 (161-219)||(40946438-40946497)
chr7 (161-219)||(44724689-44724748)
chr7 (83-227)||(13290587-13290725)
chr7 (161-219)||(4296054-4296113)
chr7 (161-219)||(18345651-18345710)
chr7 (161-219)||(26804682-26804741)
chr7 (161-219)||(37412247-37412306)
chr7 (161-219)||(38396745-38396804)
chr7 (161-220)||(3035831-3035894)
chr7 (164-220)||(24465650-24465707)
chr7 (85-219)||(39146107-39146239)
chr7 (85-196)||(11084417-11084520)
chr7 (162-217)||(25542640-25542696)
chr7 (161-219)||(443705-443764)
chr7 (161-219)||(9679169-9679228)
chr7 (161-219)||(9680930-9680989)
chr7 (158-220)||(21592262-21592325)
chr7 (161-219)||(25276251-25276310)
chr7 (162-219)||(7092332-7092390)
chr7 (161-218)||(21680137-21680195)
chr7 (161-217)||(44674-44731)
chr7 (120-157)||(1099717-1099754)
chr7 (141-193)||(24258555-24258605)
chr7 (161-220)||(20297472-20297532)
chr7 (141-196)||(42223250-42223303)
[»] chr2 (59 HSPs)
chr2 (52-228)||(17943432-17943607)
chr2 (52-225)||(12781336-12781508)
chr2 (59-228)||(17932536-17932704)
chr2 (59-228)||(27517751-27517919)
chr2 (59-228)||(22712628-22712796)
chr2 (59-228)||(37170864-37171032)
chr2 (67-228)||(30478904-30479064)
chr2 (52-228)||(38190892-38191067)
chr2 (59-228)||(20054877-20055045)
chr2 (66-228)||(22717337-22717498)
chr2 (76-228)||(17462355-17462506)
chr2 (76-228)||(39686902-39687053)
chr2 (76-228)||(45567328-45567479)
chr2 (76-228)||(2736124-2736275)
chr2 (59-228)||(20050134-20050302)
chr2 (76-228)||(2740860-2741011)
chr2 (76-227)||(39679964-39680114)
chr2 (59-194)||(33674551-33674685)
chr2 (59-159)||(35894442-35894541)
chr2 (66-228)||(33603904-33604065)
chr2 (132-228)||(28458940-28459037)
chr2 (122-228)||(20589727-20589834)
chr2 (66-151)||(30261962-30262045)
chr2 (107-196)||(45158257-45158346)
chr2 (64-219)||(11578229-11578378)
chr2 (161-228)||(40699449-40699517)
chr2 (161-219)||(5375465-5375524)
chr2 (161-219)||(27104874-27104933)
chr2 (161-219)||(45280104-45280163)
chr2 (85-220)||(23452356-23452489)
chr2 (64-228)||(34575221-34575391)
chr2 (69-195)||(10942658-10942788)
chr2 (69-195)||(10948527-10948657)
chr2 (85-228)||(30720723-30720872)
chr2 (64-195)||(43139361-43139484)
chr2 (164-219)||(43623700-43623756)
chr2 (161-219)||(19502131-19502190)
chr2 (161-219)||(42452857-42452916)
chr2 (108-219)||(18800434-18800538)
chr2 (69-228)||(26345585-26345749)
chr2 (105-196)||(27583483-27583567)
chr2 (67-218)||(35107284-35107427)
chr2 (64-128)||(39287193-39287256)
chr2 (141-222)||(17921754-17921836)
chr2 (161-219)||(19504466-19504524)
chr2 (161-219)||(21520813-21520872)
chr2 (161-219)||(42064591-42064650)
chr2 (89-196)||(7502918-7503029)
chr2 (108-228)||(27136237-27136351)
chr2 (164-219)||(13910164-13910220)
chr2 (64-138)||(20146804-20146879)
chr2 (161-219)||(40032178-40032237)
chr2 (107-217)||(44289190-44289296)
chr2 (161-228)||(15693978-15694047)
chr2 (199-228)||(33671079-33671108)
chr2 (161-220)||(35215704-35215765)
chr2 (161-220)||(35218081-35218142)
chr2 (199-228)||(45679764-45679793)
chr2 (141-219)||(42923629-42923706)
[»] scaffold0256 (1 HSPs)
scaffold0256 (59-228)||(16227-16395)
[»] scaffold0004 (1 HSPs)
scaffold0004 (59-228)||(188354-188522)
[»] chr5 (66 HSPs)
chr5 (59-228)||(22672736-22672904)
chr5 (66-228)||(25452404-25452565)
chr5 (59-228)||(31782569-31782738)
chr5 (52-228)||(11962545-11962720)
chr5 (55-228)||(17841361-17841534)
chr5 (66-228)||(2298113-2298274)
chr5 (67-228)||(35385564-35385724)
chr5 (52-228)||(16093403-16093578)
chr5 (66-228)||(40222672-40222833)
chr5 (59-228)||(1240330-1240498)
chr5 (52-228)||(10627257-10627434)
chr5 (66-228)||(25445401-25445566)
chr5 (76-228)||(1170730-1170881)
chr5 (52-228)||(26406585-26406760)
chr5 (59-227)||(28786308-28786473)
chr5 (52-191)||(25838002-25838140)
chr5 (59-153)||(42238205-42238298)
chr5 (52-228)||(25562403-25562577)
chr5 (64-228)||(4897731-4897896)
chr5 (64-226)||(4754164-4754319)
chr5 (64-228)||(2144675-2144835)
chr5 (85-219)||(4236656-4236788)
chr5 (64-193)||(29748357-29748479)
chr5 (161-219)||(4410123-4410182)
chr5 (161-219)||(16776258-16776317)
chr5 (108-225)||(17413282-17413393)
chr5 (161-219)||(25921593-25921652)
chr5 (161-219)||(38882206-38882265)
chr5 (141-219)||(658473-658550)
chr5 (161-219)||(2175019-2175078)
chr5 (161-219)||(6745168-6745227)
chr5 (161-219)||(6747405-6747464)
chr5 (158-228)||(15143562-15143633)
chr5 (64-228)||(15224880-15225042)
chr5 (161-219)||(18466784-18466843)
chr5 (161-219)||(18469111-18469170)
chr5 (161-219)||(39854583-39854642)
chr5 (85-180)||(13294711-13294811)
chr5 (106-196)||(34033714-34033798)
chr5 (140-219)||(2818455-2818533)
chr5 (64-228)||(35430177-35430347)
chr5 (121-180)||(15445431-15445493)
chr5 (161-219)||(21948126-21948185)
chr5 (161-219)||(27910550-27910609)
chr5 (161-219)||(27912636-27912695)
chr5 (161-219)||(31472733-31472792)
chr5 (85-228)||(13295768-13295907)
chr5 (161-217)||(18509440-18509497)
chr5 (64-132)||(20053852-20053921)
chr5 (196-228)||(42238298-42238330)
chr5 (161-219)||(695977-696036)
chr5 (161-219)||(10529219-10529278)
chr5 (161-219)||(16092320-16092379)
chr5 (161-219)||(18511332-18511391)
chr5 (161-219)||(20505961-20506020)
chr5 (161-219)||(21684571-21684630)
chr5 (161-219)||(24126956-24127015)
chr5 (161-219)||(26097832-26097891)
chr5 (161-195)||(6661331-6661365)
chr5 (69-138)||(5777800-5777869)
chr5 (161-228)||(34477164-34477233)
chr5 (83-132)||(35314727-35314775)
chr5 (162-218)||(42770867-42770924)
chr5 (141-219)||(18596727-18596804)
chr5 (164-219)||(31466098-31466154)
chr5 (141-219)||(40221604-40221681)
[»] scaffold0209 (1 HSPs)
scaffold0209 (59-228)||(17098-17266)
[»] scaffold0006 (1 HSPs)
scaffold0006 (76-228)||(224738-224889)
[»] scaffold0131 (2 HSPs)
scaffold0131 (76-187)||(31060-31170)
scaffold0131 (161-219)||(14502-14561)
[»] scaffold0370 (1 HSPs)
scaffold0370 (161-219)||(1572-1631)
[»] scaffold1764 (1 HSPs)
scaffold1764 (66-112)||(1345-1391)
[»] scaffold0224 (1 HSPs)
scaffold0224 (64-219)||(15942-16092)
[»] scaffold0057 (1 HSPs)
scaffold0057 (85-219)||(16771-16900)
[»] scaffold0511 (1 HSPs)
scaffold0511 (161-219)||(2150-2209)
[»] scaffold0339 (1 HSPs)
scaffold0339 (161-219)||(4105-4164)
[»] scaffold0025 (1 HSPs)
scaffold0025 (161-219)||(69411-69470)
[»] scaffold0011 (1 HSPs)
scaffold0011 (161-219)||(35748-35807)
[»] scaffold0038 (1 HSPs)
scaffold0038 (161-218)||(41604-41662)
[»] scaffold0250 (1 HSPs)
scaffold0250 (85-219)||(2916-3048)
[»] scaffold0154 (1 HSPs)
scaffold0154 (161-219)||(11593-11652)
[»] scaffold0031 (1 HSPs)
scaffold0031 (161-219)||(79294-79353)
[»] scaffold0468 (1 HSPs)
scaffold0468 (165-219)||(1763-1818)
[»] scaffold0068 (1 HSPs)
scaffold0068 (161-219)||(29280-29339)
[»] scaffold0008 (1 HSPs)
scaffold0008 (144-227)||(57542-57626)
[»] scaffold0005 (1 HSPs)
scaffold0005 (161-220)||(52120-52180)


Alignment Details
Target: chr6 (Bit Score: 180; Significance: 2e-97; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 21 - 228
Target Start/End: Complemental strand, 19702181 - 19701974
Alignment:
Q  21 gagagagtgagagagtgtagaaacaaaacactgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa 120  Q
    ||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19702181 gagagagtgagagtgtgtagaaacaaaacactgtgtagaaaacaaggtttagaagccaacatacaaactagcgtttatagagaatttctcttggcaacaa 19702082  T
Q  121 acactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggt 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||    
T  19702081 acactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttggtcacgggaagaggctgagacttgggtagaattatgt 19701982  T
Q  221 ttgaagac 228  Q
    ||||||||    
T  19701981 ttgaagac 19701974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 17695131 - 17694963
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17695131 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaaa-actagggttgggattgttttgattcaccttgaacaa 17695033  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17695032 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 17694963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 22352132 - 22351964
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  22352132 aaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgaatcaccttgaacaa 22352034  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||    
T  22352033 agcactattaggattgagtctcttggtcacgggaagaggctgagatttgggtagaattaggtttgaagac 22351964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 17035974 - 17036125
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17035974 ccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 17036072  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17036073 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 17036125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 13467743 - 13467576
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  13467743 aaaacagggtttagaagccaacatacaaactagggtttatagagaatttatctttgcaacaa-cactagggttgggattgttttgattcaccttgaacaa 13467645  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  13467644 agcactattaggattgagtctcttggtcacgggaagaggctgtgactt-ggtagaattaggtttgaagac 13467576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 22343081 - 22342913
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  22343081 aaaacagggtttagaagccaacatacaaactagggtttatagagaatctctcttggcaacaa-cactagggttgagattgttttgattcaacttgaacaa 22342983  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| |||||||| |||||||||||||||    
T  22342982 agcactattaggattgcgtctcttggtcacgggaagaggctgggatttgggtagtattaggtttgaagac 22342913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 67 - 228
Target Start/End: Original strand, 33215737 - 33215897
Alignment:
Q  67 gtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactat 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| ||||||||||    
T  33215737 gtttagaagccaacatacaaactagggtttatagagaatttctctttgcaacaa-cactagggttgtgattgttttgattcaccttgaataaagcactat 33215835  T
Q  167 taggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  33215836 taggattgagtctcttggtcacggcaagaggctgggacttggatagaattaggtttgaagac 33215897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 89 - 228
Target Start/End: Complemental strand, 12166397 - 12166258
Alignment:
Q  89 tagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcac 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||    
T  12166397 tagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacgttgaacaaagcaccattaggattgagtctcttggtcac 12166298  T
Q  189 gggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12166297 gggaagaggctgggacttgggtagaattaggtttgaagac 12166258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 25466179 - 25466011
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  25466179 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgagattgttttgattcaccttgaacaa 25466081  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||| ||||||||||||||||| |  |||||| |||||||||||||||||||||||||||||||||||||    
T  25466080 agcattattaggattgagtctcttaatcacggaaagaggctgggacttgggtagaattaggtttgaagac 25466011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 13878646 - 13878797
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13878646 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 13878744  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13878745 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 13878797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 13883394 - 13883545
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13883394 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 13883492  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13883493 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 13883545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 16785838 - 16785989
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16785838 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 16785936  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16785937 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 16785989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 56 - 228
Target Start/End: Original strand, 26643075 - 26643246
Alignment:
Q  56 tagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaa 155  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||| |||    
T  26643075 tagaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttctcttgcccacaa-cactagggttgggattgttttgattcacctcgaa 26643173  T
Q  156 caaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||| |||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  26643174 caaatcactattaggattgagtctcttggtcacaggaagatgctgggacttgggtagaattaggttggaagac 26643246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 56 - 228
Target Start/End: Original strand, 26749041 - 26749212
Alignment:
Q  56 tagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaa 155  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||| |||    
T  26749041 tagaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttctcttgcccacaa-cactagggttgggattgttttgattcacctcgaa 26749139  T
Q  156 caaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||| |||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  26749140 caaatcactattaggattgagtctcttggtcacaggaagatgctgggacttgggtagaattaggttggaagac 26749212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 26887487 - 26887336
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26887487 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 26887389  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26887388 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 26887336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 31248977 - 31248826
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31248977 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 31248879  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31248878 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 31248826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 35201589 - 35201438
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35201589 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 35201491  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35201490 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 35201438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 59 - 220
Target Start/End: Complemental strand, 3577794 - 3577635
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| |||||||| || ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  3577794 aaaacagggtttaaaaaccaacatacaaactagggtttatagagaatttctctttgcaacaa-cactagggttgggattgttttgattcaccttgaacaa 3577696  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggt 220  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  3577695 aacactattaggattgagtctcttggtcacgggaagaggctgggactt-ggtagaattaggt 3577635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 66 - 220
Target Start/End: Original strand, 25941554 - 25941705
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| ||    
T  25941554 ggtttagaaaccaacattcaaactagggtt-atagagaatttctcttggtaacaa-ctctagggttgggattgttttgattcaccttgaacaaagcatta 25941651  T
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggt 220  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  25941652 ttaggattgagtctcttggtcacgggaagaggctgggactt-ggtagaattaggt 25941705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 52 - 227
Target Start/End: Complemental strand, 5166102 - 5165928
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||  |||||  || ||||||||||||| ||||||||||||| |    
T  5166102 tgtgtagaaaacagggtttagaagccaacatacaagctagggtttatagagaatttctcaaggcaa-gaatactagggttggga-tgttttgattcactt 5166005  T
Q  152 tgaacaaagcact-attaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaaga 227  Q
    |||||||| ||||  ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||    
T  5166004 tgaacaaaacactgtttaggattgagtctcttggtcacgggaagagattgggacttgggtagaattaggtttgaaga 5165928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 24542953 - 24542818
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||||| ||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24542953 aaaataaggtttagaagccaacac-caaactatggtttatagaga-tttctcttggcaacaaacactagggttgggattgttttgattcaccttgaataa 24542856  T
Q  159 agcactattaggattgagtctcatggtcacgggaagag 196  Q
    | |||| ||||||| |||||||||||| ||| ||||||    
T  24542855 aacacttttaggatagagtctcatggttacgagaagag 24542818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 189
Target Start/End: Original strand, 7293839 - 7293966
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    ||||||||||||| |||| |||| ||||||||||||| ||||||| |||||||||| || ||||||||||||||| ||||||||   |||||||||||||    
T  7293839 aaaatagggtttaaaagcaaaca-acaaactagggttcatagaga-tttctcttggtaagaaacactagggttggtattgttttcgctcaccttgaacaa 7293936  T
Q  159 agcactattaggattgagtctcatggtcacg 189  Q
    | |||||||| ||| ||||||| ||||||||    
T  7293937 a-cactattaagatagagtctcttggtcacg 7293966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 6843178 - 6843290
Alignment:
Q  69 ttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactatta 168  Q
    |||||||||||||   |||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||     | |||||||||||| | ||| ||||    
T  6843178 ttagaagccaacaataaaactatggtttgtagagaattt-tcttggcaacaaacactagggttaggattg-----aatcaccttgaacaca-caccatta 6843270  T
Q  169 ggattgagtctcatggtcac 188  Q
    |||||||||||| |||||||    
T  6843271 ggattgagtctcttggtcac 6843290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 11138345 - 11138510
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttggga-ttgtt-ttgattcaccttgaacaaagc 161  Q
    ||||||||||||||||||   |||||||||||| |||||  || |||||| ||||||||  |||||||| || |||   ||||||||||||| | ||| |    
T  11138345 agggtttagaagccaacactaaaactagggtttttagagt-ttactcttgacaacaaactttagggttgcgacttgagattgattcaccttggagaaa-c 11138442  T
Q  162 actattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||| | |||||||||||||||   ||||| || |||||||||| ||||||||||    
T  11138443 actattaggattgagtcacttggtcacgggaagagatggggactttaggtagaattatgtttgaagac 11138510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 11983208 - 11983149
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  11983208 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 11983149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 14458946 - 14458887
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  14458946 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 14458887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 14507354 - 14507295
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  14507354 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 14507295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 15719707 - 15719836
Alignment:
Q  84 caaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    ||||||||||||| || ||| ||| || |||||||||||||||||||||| |      ||||||||||||| | ||  |||||||||||||||||||| |    
T  15719707 caaactagggtttgtatagagtttgcttttggcaacaaacactagggttgag------ttgattcaccttggaaaa--cactattaggattgagtctctt 15719798  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||| ||||||||  |||||| |||||||||||||||    
T  15719799 ggtcatgggaagagattgggactttgggtagaattagg 15719836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 26065118 - 26065177
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  26065118 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 26065177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 26085087 - 26085146
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  26085087 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 26085146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 12166439 - 12166389
Alignment:
Q  21 gagagagtgagagagtgtagaaacaaaacactgtgtagaaaatagggttta 71  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  12166439 gagagactgagagtgtgtagaaacaaaacactgtgtagaaaatagggttta 12166389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 196
Target Start/End: Complemental strand, 17904633 - 17904495
Alignment:
Q  63 tagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg-------ttttgattcaccttgaa 155  Q
    |||||||||||||||||||   |||||||||||| |||||  |||||||| ||||||||||||| |||||||||||        |||| |||||||||||    
T  17904633 tagggtttagaagccaacaacaaaactagggtttgtagagt-tttctctttgcaacaaacactaaggttgggattgaatcacaatttggttcaccttgaa 17904535  T
Q  156 caaagcactattaggattgagtctcatggtcacgggaagag 196  Q
    || | ||||||||||| ||| |||| |||||| ||||||||    
T  17904534 caca-cactattaggactgaatctcttggtcatgggaagag 17904495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 22858223 - 22858066
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    ||||||||||||| |||| | |||||||||||| |||| | |||||||||| ||||||||||||||||| ||     |||||||||||||    || |||    
T  22858223 agggtttagaagctaacacaaaaactagggtttgtaga-attttctcttggtaacaaacactagggttgaga-----ttgattcaccttg--ggaaacac 22858132  T
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    ||||| ||||||||||| |||||||  ||||||  || ||| || |||||| ||||||||||||||    
T  22858131 tattatgattgagtctcttggtcacaagaagagattgagactttaggtagatttaggtttgaagac 22858066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 219
Target Start/End: Complemental strand, 4816483 - 4816351
Alignment:
Q  85 aaactagggtttatagagaattt--ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    |||||||||||| || ||| |||  ||||| | |||||||||||||||| |   ||  ||||||||||||| | ||  |||||||||||||||||||| |    
T  4816483 aaactagggtttgtatagagtttgtctcttcggaacaaacactagggtttg---tgggttgattcaccttggaaaa--cactattaggattgagtctctt 4816389  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||| |||||||||||||| ||| |||||||||||||||    
T  4816388 ggttacgggaagaggctgagactttgggtagaattagg 4816351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 30443342 - 30443465
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    |||||||||||||||||||  |||||| | ||| ||||||| |||| ||||||||||||||||||||||      | ||||||||||||||| ||| |||    
T  30443342 agggtttagaagccaacatcaaaactatgatttgtagagaa-ttctgttggcaacaaacactagggttg-----atattgattcaccttgaagaaa-cac 30443434  T
Q  164 tattaggattgagtctcatggtcacgggaagag 196  Q
    |||||||||  |||||  |||||||||||||||    
T  30443435 tattaggat--agtcttctggtcacgggaagag 30443465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 228
Target Start/End: Complemental strand, 7542656 - 7542494
Alignment:
Q  70 tagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg------ttttgattcaccttgaacaaagcac 163  Q
    |||||||||||| | ||| |||||||| || |||||| |||||||||||||||||||||||||||||||        |||||||| |||| | ||| |||    
T  7542656 tagaagccaaca-ataaaatagggtttgtaaagaatt-ctcttggcaacaaacactagggttgggattgaatcacaattgattca-cttggagaaa-cac 7542561  T
Q  164 tattaggattgagtctcatggtcacgggaagaggct--gggacttgggtagaattaggtttgaagac 228  Q
    ||||| ||||||||||| |||||||||||||||  |  || | |||| |||||||||||||||||||    
T  7542560 tattatgattgagtctcttggtcacgggaagagatttgggaatttggatagaattaggtttgaagac 7542494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 26945278 - 26945346
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    ||||||||||||| |||||| |||||||||||||||  |||||| ||||||||||||||||||| ||||    
T  26945278 cactattaggattaagtctcttggtcacgggaagagattgggactttgggtagaattaggtttgtagac 26945346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 30445562 - 30445633
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg 138  Q
    |||||||||||||||||  |||||||||||| |||| || ||||||||||||||||||||| ||||| |||||    
T  30445562 ggtttagaagccaacattaaaactagggtttgtagataa-ttctcttggcaacaaacactacggttgagattg 30445633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 19227587 - 19227528
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||    
T  19227587 cactattaggattgagtctcttggttacgggaagaggctgagactttgggtagaattagg 19227528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 196
Target Start/End: Complemental strand, 3028123 - 3027998
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagca 162  Q
    ||||||| |||| ||||| | |||||||||||| || ||| ||| |||||||||||||||||||||||||||      |||||||||||||    || ||    
T  3028123 agggtttggaaggcaacaca-aaactagggtttgtatagagtttgctcttggcaacaaacactagggttggg-----gttgattcaccttg--ggaaaca 3028032  T
Q  163 ctattaggattgagtctcatggtcacgggaagag 196  Q
    |||||||||||||||||| |||||||| ||||||    
T  3028031 ctattaggattgagtctcttggtcacgtgaagag 3027998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 28241500 - 28241442
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattag 218  Q
    |||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||    
T  28241500 cactattaggattgagtctcttggttacgggaagaggctgggactttcggtagaattag 28241442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 30967336 - 30967396
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    |||||||||||||||||||| |||| ||||||||||||||  || ||||||||||||||||    
T  30967336 cactattaggattgagtctcttggttacgggaagaggctgaaactttgggtagaattaggt 30967396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 2629064 - 2629005
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||||| |||||||||||||||    
T  2629064 cactattaggattgagtctcttggttacgggaagagattgggactttgggtagaattagg 2629005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 30729007 - 30728948
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||| |||| |||| |||||||||||||||| | |||||||||||||||    
T  30729007 cactattaggattgactctcttggttacgggaagaggctggggctttgggtagaattagg 30728948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 11262596 - 11262658
Alignment:
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||| ||||||| |||||||  || || || |||||||||||||||||||||    
T  11262596 ttaggattgagtctcttggtcacaggaagagattgagatttaggtagaattaggtttgaagac 11262658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 219
Target Start/End: Complemental strand, 16455696 - 16455546
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagca 162  Q
    |||||||||||| ||||| | |||||||||||| || ||| ||| ||||||||||| ||||||||||||| |      |||||||||||||    || ||    
T  16455696 agggtttagaagtcaacacaaaaactagggtttgtacagagttttctcttggcaacgaacactagggttgtg-----gttgattcaccttg--ggaaaca 16455604  T
Q  163 ctattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    || |||||||| |||||| || |||||| |||||  |||||| |||||||||||||||    
T  16455603 ctgttaggattaagtctcttgctcacggaaagagattgggactttgggtagaattagg 16455546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 219
Target Start/End: Original strand, 25477336 - 25477468
Alignment:
Q  85 aaactagggtttatagagaattt--ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    ||||||||||||||| ||| |||  ||||||| |||||||||||||||| |    |  |||||||||||||   ||  |||||||||||||||||||| |    
T  25477336 aaactagggtttatatagagtttgtctcttgggaacaaacactagggtttga---gggttgattcaccttgggaaa--cactattaggattgagtctctt 25477430  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||| |||||  |||| | |||||||||||||||    
T  25477431 ggtcacggaaagagattggggctttgggtagaattagg 25477468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 12186252 - 12186184
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||| || ||||||||||||  || ||| ||||||| ||||||||||| ||||    
T  12186252 cactattaggattgagtctcttgttcacgggaagagattgagactttgggtacaattaggtttggagac 12186184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 15532878 - 15532801
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| | ||  |||||||||||||||||||| |||||| ||||||||  |||||| || ||||||||||||    
T  15532878 ttgattcaccttggaaaa--cactattaggattgagtctcttggtcatgggaagagattgggacttttggtagaattagg 15532801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 1230428 - 1230369
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||| |||| |||| |  ||||||||||||||| |||||||||||||||    
T  1230428 cactattaggattgactctcttggttattggaagaggctgggactttgggtagaattagg 1230369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 13057329 - 13057388
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| |||||| |||| ||||||||||  |||||| |||||||||||||||    
T  13057329 cactattaggattaagtctcttggttacgggaagagattgggactttgggtagaattagg 13057388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 15346444 - 15346495
Alignment:
Q  84 caaactagggtttatagagaattt-ctcttggcaacaaacactagggttggg 134  Q
    ||||||||||||| || | ||||| |||||||||||||||||||||||||||    
T  15346444 caaactagggtttgtataaaatttgctcttggcaacaaacactagggttggg 15346495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 30034782 - 30034723
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||||||   |||| | |||||||||||||||| |||||||||||||||    
T  30034782 cactattaggattgagtcaattggttaagggaagaggctgggactttgggtagaattagg 30034723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 32280131 - 32280190
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggactt-gggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  ||||||||  ||||||||||||    
T  32280131 cactattaggattgagtctcttggttacgggaagagattgggacttcaggtagaattagg 32280190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 3577634 - 3577601
Alignment:
Q  195 aggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||| |||||||||||||||||||||||||||    
T  3577634 aggctgagacttgggtagaattaggtttgaagac 3577601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 12911659 - 12911598
Alignment:
Q  128 ggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacg 189  Q
    |||||| ||||||||| ||| ||||||| ||| |||||||| ||||||||||| | ||||||    
T  12911659 ggttggtattgttttgcttccccttgaataaaacactattaagattgagtctcttagtcacg 12911598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 17012085 - 17012153
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttg 132  Q
    ||||||||||||  |||| |||||||||||||| || | | ||| |||||||||||||||||||||||||    
T  17012085 agggtttagaagtaaaca-acaaactagggtttgtataaagtttgctcttggcaacaaacactagggttg 17012153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 22490775 - 22490832
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaatta 217  Q
    |||||||||||||||||||| |||| |||| |||||  |||||| |||||||||||||    
T  22490775 cactattaggattgagtctcttggttacggaaagagattgggactttgggtagaatta 22490832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 25941706 - 25941739
Alignment:
Q  195 aggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||| |||||||||||||||||||||||||||    
T  25941706 aggctgagacttgggtagaattaggtttgaagac 25941739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 180; Significance: 2e-97; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 17 - 228
Target Start/End: Original strand, 4558170 - 4558381
Alignment:
Q  17 atcagagagagtgagagagtgtagaaacaaaacactgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggca 116  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4558170 atcagagagagtgagagtgtgtagaaacaaaacactgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggca 4558269  T
Q  117 acaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaatt 216  Q
    ||||||||||||| |||| |  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4558270 acaaacactagggctgggttgtttttgatttaccttgaacaaagcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaatt 4558369  T
Q  217 aggtttgaagac 228  Q
    ||||||||||||    
T  4558370 aggtttgaagac 4558381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 17 - 228
Target Start/End: Original strand, 47566352 - 47566563
Alignment:
Q  17 atcagagagagtgagagagtgtagaaacaaaacactgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47566352 atcagagagagtgagagagtgtagaaacaaaacactgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttatcttggca 47566451  T
Q  117 acaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaatt 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||| |||| | ||||||||||||    
T  47566452 acaaacactagggttgagattgttttgattcacattgaacaaagcactattaggattgagtctcttggtcacaggaagagactggaatttgggtagaatt 47566551  T
Q  217 aggtttgaagac 228  Q
    ||||||||||||    
T  47566552 aggtttgaagac 47566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 21 - 228
Target Start/End: Original strand, 36771259 - 36771466
Alignment:
Q  21 gagagagtgagagagtgtagaaacaaaacactgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa 120  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  36771259 gagagagtgagtgtgtgtagaaacaaaacactgtgtagaaaatagggtttagaagccaacatacaaactagggtttgaagagaatttctcttggcaacaa 36771358  T
Q  121 acactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggt 220  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||||| |||||||||||| |||||||||||||||||||    
T  36771359 acactagggttgagattgttttgattcaccttgaacaaaacactattatgattgagtctcttggtcatgggaagaggctgtgacttgggtagaattaggt 36771458  T
Q  221 ttgaagac 228  Q
    ||||||||    
T  36771459 ttgaagac 36771466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 18586868 - 18587036
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18586868 aaaatagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 18586966  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18586967 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 18587036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 21 - 228
Target Start/End: Original strand, 36769342 - 36769549
Alignment:
Q  21 gagagagtgagagagtgtagaaacaaaacactgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa 120  Q
    ||||||||||| | ||||||||| ||||||||||||| |||| | |||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  36769342 gagagagtgagtgtgtgtagaaataaaacactgtgtaaaaaacaaggtttagaagccaacatacaaactagggtttgaagagaatttctcttggcaacaa 36769441  T
Q  121 acactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggt 220  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| || ||||||||||||||||||| |||||||||| ||||||||    
T  36769442 acactagggttgggattgttttgattcaccttgaacaaaacactattaggatcgagtttcttggtcacgggaagaggctgagacttgggtaaaattaggt 36769541  T
Q  221 ttgaagac 228  Q
    ||||||||    
T  36769542 ttgaagac 36769549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 8529169 - 8529337
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  8529169 aaaatagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacac-cactagggttgggattgttttgattcaccttgaacaa 8529267  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8529268 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 8529337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 25699644 - 25699819
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25699644 tgtgtagaaaacagggtttaaaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcacct 25699742  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  25699743 tgaacaaagcactattaggattgagtctcttggtcacgggaagagactgggactttggtagaattaggtttgaagac 25699819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 16489244 - 16489419
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  16489244 tgtgtagaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgagattgttttgattcacct 16489342  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  16489343 tgaacaaagcactattaggattgagtctcttggtcacgggaagagactgggacttgggtagaattaggtttgaagac 16489419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 31300326 - 31300494
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  31300326 aaaacagggtttagaaaccaacattcaaactagggtttatagagaatttctctttgcaacaa-cactagggttgggattgttttgattcaccttgaacaa 31300424  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31300425 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 31300494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 4569989 - 4570164
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  4569989 tgtgtagaaaacagagtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacat-cactagggttgggattgttttgattcacct 4570087  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  4570088 tgaacaaaacactattaggatcgagtctcttggtcacgggaagaggttgggacttgggtagaattaggtttgaagac 4570164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 4556339 - 4556171
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  4556339 aaaacagggtttagaaaccaacttacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgtttcgattcaccttgaacaa 4556241  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  4556240 agcactattaggattgagtctcttggtcacgggaagaggctgggactttggtagaattaggtttgaagac 4556171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 15316860 - 15317028
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||| |||||||||||    
T  15316860 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcagcaa-cactagggttcggattgttttgatttaccttgaacaa 15316958  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15316959 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 15317028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 15312225 - 15312386
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15312225 ggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaaagcacta 15312323  T
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||| | |||||||||||||| |||| |||||||||||||||||||||||||||    
T  15312324 ttaggattgagtcgcttggtcacgggaagatgctgtgacttgggtagaattaggtttgaagac 15312386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 15831043 - 15831211
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15831043 aaaacagggtttagaaaccaacatacaaactagggtttatagaaaatttttcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 15831141  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  15831142 atcactattaggattgagtctcttggtcacgggaagaggctgggacttgcgtagaattaggtttgaagac 15831211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 13072268 - 13072093
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  13072268 tgtgtagaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacat-cactagggttgggattgttttgattcacct 13072170  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||| |||||||| ||||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||    
T  13072169 tgaacaaatcactattatgattgagtctcttggtcactggaagaggctgtgatttgggtagaattaggtttgaagac 13072093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 16638721 - 16638897
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16638721 tgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctctttgcaacaaacactagggttgggattgttttgattcacct 16638820  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    | |||||| |||| ||||||||||||||| ||||||| |||||||  || |||||||||||||| ||||||||||||    
T  16638821 taaacaaaacactgttaggattgagtctcttggtcacaggaagagattgagacttgggtagaatgaggtttgaagac 16638897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 4884776 - 4884944
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||| ||| ||||||||||||||||||||||||||||    
T  4884776 aaaacagggtttagaagccaacatacaaattagggtttatagagaatttctctttgcaacaa-cactgggggtgggattgttttgattcaccttgaacaa 4884874  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||||    
T  4884875 agcactattaggattgagtctcttggtcacgggaagaggctgagacttgggtataatcaggtttgaagac 4884944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 16689220 - 16689052
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||| |||||||||||||||||| |||||||||| ||||||| | ||||| |||| ||||||||||||||||||||||||    
T  16689220 aaaacagggtttagaaaccaacattcaaactagggtttatagataatttctctttgcaacaa-ctctaggtttggaattgttttgattcaccttgaacaa 16689122  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  16689121 agcactattaggattgagtctcttggtcacaggaagaggctgggacttgggtagaattaggtttgaagac 16689052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 7050511 - 7050369
Alignment:
Q  85 aaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatgg 184  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  7050511 aaactagggtttatagagaatttctcttggcaacaa-cactaaggttgtgattgttttgattcaccttgaacaaaacactattaggattgagtctcttgg 7050413  T
Q  185 tcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  7050412 tcacgggaagaggctgggacttgggtagaattaggtttgaagac 7050369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 11853468 - 11853619
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| | ||||||||||||||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  11853468 ccaacaaataaactagggtttatagagaatctctcttggcaacaa-ctctagggttgagattgttttgattcaccttgaacaaaacactattaggattga 11853566  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11853567 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 11853619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 55822184 - 55822335
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||| ||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  55822184 ccaacaaacaaattagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 55822282  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  55822283 gtctcttggtcacgggaagaggctgagacttgggtagaattaggtttgaagac 55822335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 26557664 - 26557773
Alignment:
Q  83 acaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||||    
T  26557664 acaaactagggtttatagaga-tttctcttggcaacaaacactagggttgggattgttttgattcaccttaaacaaaacactattaggatatagtctcat 26557762  T
Q  183 ggtcacgggaa 193  Q
    |||||||||||    
T  26557763 ggtcacgggaa 26557773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 68 - 196
Target Start/End: Complemental strand, 25614191 - 25614064
Alignment:
Q  68 tttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactatt 167  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||| |||| ||    
T  25614191 tttagaagccaacatacaa-ctatggtttatagagaatttctcttggtaacaaacactagggttgagattgttttgattcacattgaacaaaacactgtt 25614093  T
Q  168 aggattgagtctcatggtcacgggaagag 196  Q
    || |||||||||| |||||||| ||||||    
T  25614092 agaattgagtctcttggtcacgagaagag 25614064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 228
Target Start/End: Complemental strand, 5337035 - 5336894
Alignment:
Q  88 ctagggtttatagagaatttctcttggcaacaaacactag--ggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggt 185  Q
    ||||||||||||||||||| || ||||||||||||||||   ||||| ||||||||||| |||||||||| ||| |||| ||||||||||||||| ||||    
T  5337035 ctagggtttatagagaatt-ctattggcaacaaacactatatggttgagattgttttgactcaccttgaataaaacactgttaggattgagtctcttggt 5336937  T
Q  186 cacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||  ||||||||||||||||||||||||||||||    
T  5336936 cacgggaagagattgggacttgggtagaattaggtttgaagac 5336894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 16186110 - 16185947
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    ||||||||||| | |||| ||||||||||||||| ||||| |||||||  ||   | |||||| |||||||||||||||||||||||||||||||| |||    
T  16186110 agggtttagaaacaaaca-acaaactagggtttagagaga-tttctctaagcgggagacactaaggttgggattgttttgattcaccttgaacaaaacac 16186013  T
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    | ||||||||||||||| |||||||||||||||  ||| || ||||||||||||||||||||||||    
T  16186012 tgttaggattgagtctcttggtcacgggaagagattggaactttgggtagaattaggtttgaagac 16185947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 3982457 - 3982289
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    ||||||||||| |||| | |||| ||||||||||||| |||| || |||||||||||||||||||||||||||| ||||||||| |||||||||| | ||    
T  3982457 aaaatagggttcagaaacaaaca-acaaactagggttcatagtga-tttctcttggcaacaaacactagggttgagattgtttttattcaccttggagaa 3982360  T
Q  159 agcactattaggattgagtctcatggtcacgggaagag-gctgggac-ttgggtagaattaggtttgaagac 228  Q
    | ||||||||||||||||| || |||||||||||||||   |||||| ||||||||||||| ||||||||||    
T  3982359 a-cactattaggattgagtttcttggtcacgggaagagatttgggactttgggtagaattaagtttgaagac 3982289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 4874752 - 4874623
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    |||||||||||||||| |||||||||| |||| |||||||| |||| | ||||||||||||| |||||| ||||||||||||||||||| |||| |||||    
T  4874752 ggtttagaagccaacaaacaaactaggatttaaagagaatt-ctctagacaacaaacactagagttgggtttgttttgattcaccttgatcaaaacacta 4874654  T
Q  166 ttaggattgagtctcatggtcacgggaagag 196  Q
    ||| ||| ||||||| |||||||||||||||    
T  4874653 ttaagatagagtctcttggtcacgggaagag 4874623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 9022367 - 9022525
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    |||||||||||| ||||||  |||||||||||| ||||||||| ||||||||||||||||||| ||||||||     ||||||||||||| | ||| ||     
T  9022367 agggtttagaagtcaacatcaaaactagggtttgtagagaatt-ctcttggcaacaaacactatggttggga-----ttgattcaccttggagaaa-cag 9022459  T
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    ||||||||| || | || |||||||||||||||  || ||| |||||| |||||||||||||||||    
T  9022460 tattaggatagaatttcttggtcacgggaagagattgagactttgggttgaattaggtttgaagac 9022525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 32274174 - 32274087
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaa 155  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||| |||| ||||||||||||||||||||||    
T  32274174 ggtttagaagccaaca-acaaactagagtttatagaga-tttctattggcaacaaacactagagttgagattgttttgattcaccttgaa 32274087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 10112932 - 10113090
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    |||||||||||||||||| | |||||||||||| |||||  || ||||||||||||||||||||||||| ||     ||||||||||||  |  || |||    
T  10112932 agggtttagaagccaacacaaaaactagggtttgtagag-tttgctcttggcaacaaacactagggttgaga-----ttgattcacctt--aggaaacac 10113023  T
Q  164 tattaggattgagtctcatggtcac-gggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    ||||| ||||||||||| ||||||| ||||||||  | |||| |||||||||||||| |||||||||    
T  10113024 tattatgattgagtctcttggtcacggggaagagattaggactttgggtagaattagatttgaagac 10113090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 219
Target Start/End: Complemental strand, 18535084 - 18534953
Alignment:
Q  83 acaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctca 181  Q
    |||||||||||||| || ||| ||| ||||||||||||||||||||||||||| |||     |||||||||||  ||  ||||||||||||||||||||     
T  18535084 acaaactagggtttgtatagagtttgctcttggcaacaaacactagggttggggttg-----attcaccttgagaaa--cactattaggattgagtctct 18534992  T
Q  182 tggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||| ||||||  || ||| |||||||||||||||    
T  18534991 tggtcacgagaagagattgagactttgggtagaattagg 18534953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 19322756 - 19322906
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagca 162  Q
    |||||||||||| |||||   |||||||||||| || ||| ||| |||||||||||||||||||||||| || |||     ||||||||||   ||  ||    
T  19322756 agggtttagaagtcaacaagaaaactagggtttgtatagagtttgctcttggcaacaaacactagggtttgggttg-----attcaccttgggaaa--ca 19322848  T
Q  163 ctattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||| |||||||||||||||  || ||| |||||||||||||||    
T  19322849 ctattaggattgagtctcttggtcacgggaagagattgagactttgggtagaattagg 19322906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 5637644 - 5637585
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  5637644 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 5637585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 8631598 - 8631539
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  8631598 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 8631539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 22044569 - 22044510
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  22044569 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 22044510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 22046864 - 22046805
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  22046864 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 22046805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 22132570 - 22132511
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  22132570 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 22132511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 22802913 - 22802854
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  22802913 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 22802854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 24348372 - 24348431
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  24348372 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 24348431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 221
Target Start/End: Original strand, 28453747 - 28453897
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    ||||||||||||||||||   ||||||||||||  ||||  || |||||||||| |||||||||||||||||     |||||||||||||    || |||    
T  28453747 agggtttagaagccaacactaaaactagggtttgcagagt-ttgctcttggcaagaaacactagggttggga-----ttgattcaccttg--ggaaacac 28453838  T
Q  164 tattaggattgagtctcatggtcacgggaagaggctggga-cttgggtagaattaggtt 221  Q
    | ||||||||||||||| |||| ||||||||||  | ||| ||||||||||||||||||    
T  28453839 tgttaggattgagtctcttggttacgggaagagatttggaccttgggtagaattaggtt 28453897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 36921672 - 36921613
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  36921672 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 36921613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 38409359 - 38409418
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  38409359 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 38409418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 51015400 - 51015459
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  51015400 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 51015459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 196
Target Start/End: Complemental strand, 18537744 - 18537619
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagca 162  Q
    ||||||||||| | |||| |||||||||||||| || ||| ||| ||||||||||||| ||||||||||||| |||     |||||||||  |  || ||    
T  18537744 agggtttagaaacaaaca-acaaactagggtttgtatagagtttgctcttggcaacaaccactagggttggggttg-----attcacctt--aggaaaca 18537653  T
Q  163 ctattaggattgagtctcatggtcacgggaagag 196  Q
    |||||||||||||||||| |||||||||||||||    
T  18537652 ctattaggattgagtctcttggtcacgggaagag 18537619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 47868537 - 47868614
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| | ||  |||||||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||    
T  47868537 ttgattcaccttggaaaa--cactattaggattgagtctcttggttacgggaagaggctgagactttgggtagaattagg 47868614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 3824749 - 3824690
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||  |||| |||||||||||||||||| |||||||||||||||    
T  3824749 cactattaggattgagtctattggttacgggaagaggctgggactttgggtagaattagg 3824690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 7941477 - 7941536
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| || ||||||||||||||| |||||||||||||||    
T  7941477 cactattaggattgagtctcttggttacaggaagaggctgggactttgggtagaattagg 7941536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 9148407 - 9148466
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| || ||||||||||||    
T  9148407 cactattaggattgagtctcttggttacgggaagaggctgggactttaggtagaattagg 9148466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 9863770 - 9863928
Alignment:
Q  64 agggtttagaagccaacat-acaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagca 162  Q
    |||||||||||||||| |  | |||||||||||| |||||  | | |||||||||||||||||| |||||||     ||||||||||||||   ||  |     
T  9863770 agggtttagaagccaaaaacaaaaactagggtttgtagagtttgt-tcttggcaacaaacactaaggttggg-----tttgattcaccttgggaaa--cc 9863861  T
Q  163 ctattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||  |||||||||||||||  || ||| ||||||||||||| ||||||||||    
T  9863862 ctattaggattgagtcttttggtcacgggaagagattgagactttgggtagaattaagtttgaagac 9863928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 36919763 - 36919704
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| || ||||||||||||    
T  36919763 cactattaggattgagtctcttggttacgggaagaggctgggacttttggtagaattagg 36919704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 37089550 - 37089491
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| || | |||||||||||||||||| |||||||||||||||    
T  37089550 cactattaggattgagtctcttgattacgggaagaggctgggactttgggtagaattagg 37089491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 40091594 - 40091535
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  40091594 cactattatgattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 40091535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 47210931 - 47210872
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| | || |||||||||||||||||| |||||||||||||||    
T  47210931 cactattaggattgagtctcttagttacgggaagaggctgggactttgggtagaattagg 47210872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 47274880 - 47274939
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||| |||||||| |||||||||||||||    
T  47274880 cactattaggattgagtctcttggttacgggaagaagctgggactttgggtagaattagg 47274939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 52043652 - 52043579
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg 138  Q
    |||||||||||||||||||  |||||| ||||| |||||  ||||||||| || |||||||||||||||||||||    
T  52043652 agggtttagaagccaacatcaaaactaaggtttgtagagt-tttctcttgtcagcaaacactagggttgggattg 52043579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 2485051 - 2485006
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggactt 206  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||    
T  2485051 cactattaggattgagtctcttggttacgggaagaggctgggactt 2485006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 6764998 - 6765058
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    |||| ||||||||||||||| |||| | |||||||||||||||| ||||||||||||||||    
T  6764998 cactgttaggattgagtctcttggttatgggaagaggctgggactttgggtagaattaggt 6765058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 11006416 - 11006356
Alignment:
Q  161 cactattaggattg-agtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  11006416 cactattaggattggagtctcttggttacgggaagaggctgggactttgggtagaattagg 11006356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 11008745 - 11008685
Alignment:
Q  161 cactattaggattg-agtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  11008745 cactattaggattggagtctcttggttacgggaagaggctgggactttgggtagaattagg 11008685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 22801059 - 22800982
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| | ||  |||||||||||||||||||| || | |||||||||||||| ||| |||||||||||||||    
T  22801059 ttgattcaccttggaaaa--cactattaggattgagtctcttgattacgggaagaggctgagactttgggtagaattagg 22800982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 17662424 - 17662365
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| || ||||||| ||||||| |||||||||||||||    
T  17662424 cactattaggattgagtctcttggttacaggaagagactgggactttgggtagaattagg 17662365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 22134795 - 22134736
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| | ||||| |||||||||| |||||||||||||||    
T  22134795 cactattaggattgagtctcttggttatgggaaaaggctgggacattgggtagaattagg 22134736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 24888950 - 24889009
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||| || |||| |||||||||||||||    
T  24888950 cactattaggattgagtctcttggttacgggaagagactaggactttgggtagaattagg 24889009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 48486473 - 48486532
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||||| |||||||||||||||    
T  48486473 cactattaggattgagtctcttggttacgggaagagattgggactttgggtagaattagg 48486532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 38208953 - 38208880
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg 138  Q
    |||||||||||||||||||   | |||| |||| |||| |||| ||||||||||||||||||||||||| |||||    
T  38208953 agggtttagaagccaacatcatatctagcgtttgtagaaaatt-ctcttggcaacaaacactagggttgagattg 38208880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 47151162 - 47151006
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    |||||||||||||||||| | |||||| |||||||||||  || ||||||| ||| |||||||||||||  ||||     ||||||||||   ||  |||    
T  47151162 agggtttagaagccaacaca-aaactaaggtttatagagt-ttgctcttggtaaccaacactagggttgaaattg-----attcaccttgggaaa--cac 47151072  T
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggactt-gggtagaattaggtttgaagac 228  Q
    | ||||||||||||||| |||||||  ||||||  || || || ||||||||||||||||||||||    
T  47151071 tgttaggattgagtctcttggtcacatgaagagattgagaatttgggtagaattaggtttgaagac 47151006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 54906636 - 54906709
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg 138  Q
    |||| |||||||||||||   |||||||||||| || ||  |||||||| |||||||||||||||||||||||||    
T  54906636 agggcttagaagccaacaataaaactagggtttgtaaagt-tttctctttgcaacaaacactagggttgggattg 54906709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 5516501 - 5516453
Alignment:
Q  89 tagggtttatagagaatttctcttggcaacaaacactagggttgggattg 138  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  5516501 tagggtttgtagaga-tttcttttggcaacaaacactagggttgggattg 5516453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 31849777 - 31849720
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaatta 217  Q
    |||||||||||||||||||| || | |||||||||||||| ||| |||||||||||||    
T  31849777 cactattaggattgagtctcttgcttacgggaagaggctgagactttgggtagaatta 31849720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 40999127 - 40999062
Alignment:
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||| |||||||||||||||   | ||| ||||||||||||||||||| ||||    
T  40999127 tattaggattgagtctcttggtcacgggaagagatcgagactttgggtagaattaggtttggagac 40999062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 31983708 - 31983640
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggactt-gggtagaattaggtttgaagac 228  Q
    |||||||| |||| |||||| |||||| ||||||||  || ||||| ||||||||||||||||||||||    
T  31983708 cactattaagattaagtctcttggtcatgggaagagattgagactttgggtagaattaggtttgaagac 31983640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 37313294 - 37313186
Alignment:
Q  107 tctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctggga-ct 205  Q
    ||||||||||||||||||||||||| |    |  ||||||||||||||  ||  |||||||||||||||||||| |||| |||| |||||  |||||  |    
T  37313294 tctcttggcaacaaacactagggtttga---gagttgattcaccttgagaaa--cactattaggattgagtctcttggttacggaaagagattgggattt 37313200  T
Q  206 tgggtagaattagg 219  Q
    ||||||||||||||    
T  37313199 tgggtagaattagg 37313186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 2891445 - 2891504
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  || ||| |||||||||||||||    
T  2891445 cactattaggattgagtctcttggttacgggaagagattgagactttgggtagaattagg 2891504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 6133026 - 6133085
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  || ||| |||||||||||||||    
T  6133026 cactattaggattgagtctcttggttacgggaagagattgagactttgggtagaattagg 6133085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 11435109 - 11435168
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| || ||||||| || |||| |||||||||||||||    
T  11435109 cactattaggattgagtctcctggttaccggaagagtctaggactttgggtagaattagg 11435168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 12396024 - 12395965
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  || ||| |||||||||||||||    
T  12396024 cactattaggattgagtctcttggttacgggaagagattgtgactttgggtagaattagg 12395965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 13544113 - 13544172
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||| ||||||  |||||| |||||||||||||||    
T  13544113 cactattaggattgagtctcttggttacgtgaagagattgggactttgggtagaattagg 13544172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 13547308 - 13547367
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  || ||| |||||||||||||||    
T  13547308 cactattaggattgagtctcttggttacgggaagagattgagactttgggtagaattagg 13547367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 24879143 - 24879202
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  || ||| |||||||||||||||    
T  24879143 cactattaggattgagtctcttggttacgggaagagattgagactttgggtagaattagg 24879202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 24880605 - 24880664
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  || ||| |||||||||||||||    
T  24880605 cactattaggattgagtctcttggttacgggaagagattgagactttgggtagaattagg 24880664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 26086155 - 26086096
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||| | |||||||||||||||    
T  26086155 cactattaggattgagtctcttggttacgggaagagattggggctttgggtagaattagg 26086096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 138
Target Start/End: Original strand, 10114435 - 10114465
Alignment:
Q  108 ctcttggcaacaaacactagggttgggattg 138  Q
    |||||||||||||||||||||||||||||||    
T  10114435 ctcttggcaacaaacactagggttgggattg 10114465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 38890405 - 38890347
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattag 218  Q
    |||||||||||||||||||| || ||||||||||||  || ||| ||||||||||||||    
T  38890405 cactattaggattgagtctcttgatcacgggaagagattgagactttgggtagaattag 38890347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 12102240 - 12102308
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||| || |||||| ||||| ||  ||| || ||||||||||||||||||| ||||    
T  12102240 cactattaggattgagtatcttggtcatgggaaaagattggaactttgggtagaattaggtttggagac 12102308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 14787610 - 14787550
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    |||||||||||||||||||| |||| ||||||||||  || ||| |||| |||||||||||    
T  14787610 cactattaggattgagtctcttggttacgggaagagattgtgactttggatagaattaggt 14787550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 18709342 - 18709282
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggactt-gggtagaattaggt 220  Q
    |||||||||| ||||||||| |||| ||||||||||  || ||||| ||||||||||||||    
T  18709342 cactattagggttgagtctcttggttacgggaagagattgcgactttgggtagaattaggt 18709282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 25357791 - 25357835
Alignment:
Q  162 actattaggattgagtctcatggtcacgggaagaggctgggactt 206  Q
    ||||||||||||||||||| |||||| ||||||||  ||||||||    
T  25357791 actattaggattgagtctcttggtcatgggaagagattgggactt 25357835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 166; Significance: 5e-89; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 35 - 228
Target Start/End: Original strand, 33032532 - 33032724
Alignment:
Q  35 gtgtagaaacaaaacactgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttggg 134  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  33032532 gtgtagaaacaaaacattgtgtagaaaacatggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgag 33032630  T
Q  135 attgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33032631 attgttttgattcaccttgaacaaagcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 33032724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 590696 - 590864
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  590696 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cacttgggttgggattgttttgattcaccttgaacaa 590794  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  590795 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 590864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 35 - 228
Target Start/End: Complemental strand, 17799728 - 17799536
Alignment:
Q  35 gtgtagaaacaaaacactgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttggg 134  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| |||||||||||||    
T  17799728 gtgtagaaacaaaacactatgtagaaaacagggtttagaagccaacatacaaactaggatttatagagaatttgtctaggcaacaa-cactagggttggg 17799630  T
Q  135 attgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  17799629 attgttttgattcaccttgaacaaaacactattaggattgagtctcttggtcacgggaagaggctgagacttgagtataattaggtttgaagac 17799536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 9021387 - 9021219
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  9021387 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctctttgcaacaa-cactagggttcggattgttttgattcaccttgaacaa 9021289  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9021288 aacactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 9021219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 23179841 - 23179673
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23179841 aaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 23179743  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| ||||||| ||||||||||| ||||| |||| ||||||||||||||||    
T  23179742 agcactattaggattgagtctcttggtcaccggaagaggctgtgactttggtaaaattaggtttgaagac 23179673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 28895411 - 28895572
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||    
T  28895411 ggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-ctctagggttgagattgttttgattcaccttgaacaaaacacta 28895509  T
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28895510 ttaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 28895572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 29555065 - 29554900
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29555065 aaaacagggtttagaaaccatcatacaaactagggtttttagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 29554967  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaa 225  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  29554966 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattatgtttgaa 29554900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 21033772 - 21033939
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  21033772 aaaacagggtttagaagccaacatacaaactagggtttatagataatttctcttggcaacaa-cactaggcttgggattgttttgattcaccttgaacaa 21033870  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    | |||||||||||||||||||| ||||||| ||||| ||||||||||||||||||| |||||||||||||    
T  21033871 aacactattaggattgagtctcttggtcacaggaag-ggctgggacttgggtagaaataggtttgaagac 21033939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 2267311 - 2267135
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |    
T  2267311 tgtgtagaaaacatggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactacggttgagattgttttgattcacgt 2267212  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||| |||| ||||||||||||||| |||||||  ||||||  | ||||||||||||||||||||||||||||    
T  2267211 tgaacaaaacactgttaggattgagtctcttggtcacatgaagagattaggacttgggtagaattaggtttgaagac 2267135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 16752785 - 16752634
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16752785 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 16752687  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16752686 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 16752634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 28327827 - 28327978
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28327827 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 28327925  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28327926 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 28327978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 3276246 - 3276414
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||| |||| ||||||| | | ||||||||||||||||||||| |||||||||||    
T  3276246 aaaacagggtttagaagccaacacaaaaactagggtttatagagaatttttctttgcaacaa-ctccagggttgggattgttttgatttaccttgaacaa 3276344  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  3276345 agcactattaggattgagtctcttggtcatgggaagaggctgggacttgggtagaattaggtttgaagac 3276414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 30423106 - 30423283
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  30423106 tgtgtagaaaacagggtttagaagccaacaaacaaactagggtttatagagaatttctcttggcaacaaacactagggctgagattgttttgattcacct 30423205  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    |||||||| |||| ||||||||||||||| ||||| |||||||||  ||| || |||| |||||||||||||||||||    
T  30423206 tgaacaaaacacttttaggattgagtctcttggtcgcgggaagagattggaactttggatagaattaggtttgaagac 30423283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 16757530 - 16757379
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16757530 ccaacaaacaaactagggtttatagagaatctctcttgacaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 16757432  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16757431 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 16757379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 35 - 228
Target Start/End: Complemental strand, 26268534 - 26268344
Alignment:
Q  35 gtgtagaaacaaaacactgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttggg 134  Q
    |||||||||||||| | |||||| |||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||| |    
T  26268534 gtgtagaaacaaaataatgtgtaaaaaacaaggtttagaagcctacatacaaactagggtttatagagaatttctcttggcaac-aacactagagttgag 26268436  T
Q  135 attgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||||| |||||||| ||||||  ||| ||||||||| |||||| |||||||||||||||||||| |||||||||    
T  26268435 attgttttgattcaccttgaacaaaacactattaagattga--ctcttggtcacggaaagaggatgggacttgggtagaattagatttgaagac 26268344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 4812750 - 4812599
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4812750 ccaacaaacaaactagggttcatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 4812652  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  4812651 gtcttttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 4812599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 28332557 - 28332701
Alignment:
Q  83 acaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    ||||||||||||||||| ||||| |||||||| ||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  28332557 acaaactagggtttataaagaatctctcttggtaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctctt 28332655  T
Q  183 ggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  28332656 ggtcacgagaagaggctgggacttgggtagaattaggtttgaagac 28332701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 25684562 - 25684713
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25684562 ccaacaaacaaactagggtttatagagaatctctcttagcaacaa-ctctagggttgggattgttttgattcaccttgaacaaatcactattaggattga 25684660  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
     |||| ||||||||||||||| | |||||||||||||||||||||||||||||    
T  25684661 atctcttggtcacgggaagagacagggacttgggtagaattaggtttgaagac 25684713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 15949436 - 15949605
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| |||||||| ||||||||| ||||||||||||||| |||||||| |||||  |||||||||||||| ||| |||||||| ||||||||||||||||    
T  15949436 aaaacagggtttaaaagccaacacacaaactagggtttacagagaatt-ctctttacaacaaacactaggtttgtgattgtttggattcaccttgaacaa 15949534  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggct-gggacttgggtagaattaggtttgaagac 228  Q
    | ||||||||||||  |||||| |||||||||||||||  | |||||||||||| ||||||||||||||||    
T  15949535 aacactattaggatatagtctcttggtcacgggaagagattcgggacttgggtaaaattaggtttgaagac 15949605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 17847604 - 17847749
Alignment:
Q  83 acaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    |||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||| |||| |    
T  17847604 acaaactaaggtttatagaga-tttctctaggcaacaaacactatggttgggattgttttgattcaccttgaacgaaacactattaggattgaatctctt 17847702  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    | ||||||||||||  || ||| ||||||||||||||||||||||||    
T  17847703 gatcacgggaagagattgagactttgggtagaattaggtttgaagac 17847749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 28228423 - 28228583
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    |||||||||| ||||| | |||||| ||||||||||||||| || |||||||||||||||| |||| | | |||| | |||||||||||||||| |||||    
T  28228423 ggtttagaaggcaacaaataaactaaggtttatagagaatt-cttttggcaacaaacactatggttagaactgttgttattcaccttgaacaaaacacta 28228521  T
Q  166 ttaggattgagtctcatggtcacgggaagaggct-gggacttgggtagaattaggtttgaag 226  Q
    ||||||| ||| ||| |||||||| ||||||  |  |||||| |||||||||| ||||||||    
T  28228522 ttaggatagagactcttggtcacgagaagagattctggactttggtagaattaagtttgaag 28228583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 31573993 - 31573838
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    ||||||||||||||||   |||||||| ||| |||||  |||||||||||||||||||||| |||||||||||     ||||||||||   ||  ||||     
T  31573993 ggtttagaagccaacacgaaaactaggatttgtagagt-tttctcttggcaacaaacactatggttgggattg-----attcaccttgggaaa--cactg 31573902  T
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||| |||||||||||||||  || ||| ||||||||||||||||||||||||    
T  31573901 ttaggattgagtctcttggtcacgggaagagattgagactttgggtagaattaggtttgaagac 31573838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 15944775 - 15944869
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttga 154  Q
    |||| ||||||||||||| |||| ||||| |||||||||||||||| | ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  15944775 aaaacagggtttagaagctaacaaacaaattagggtttatagagaaat-ctcttggcaacaaacactagggttctgattgctttgattcaccttga 15944869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 6376067 - 6376212
Alignment:
Q  83 acaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    ||||||||||||||| ||||| |||||||  ||   | ||||||| ||| | ||||||||||||||||||||||||| |||| ||| ||||||||||| |    
T  6376067 acaaactagggtttagagaga-tttctctaagcgggagacactagagtttgaattgttttgattcaccttgaacaaaacactgttaagattgagtctctt 6376165  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    ||||||  ||||||  || ||| ||  ||||||||||||||||||||    
T  6376166 ggtcacatgaagagattgagactttatgtagaattaggtttgaagac 6376212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 14807907 - 14807966
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  14807907 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 14807966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 22684835 - 22684776
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  22684835 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 22684776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 27829453 - 27829512
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctggga-cttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||    
T  27829453 cactattaggattgagtctcttggttacgggaagaggctgggaccttgggtagaattagg 27829512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 44721000 - 44721059
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  44721000 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 44721059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 13985278 - 13985193
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggct-gggac-ttgggtagaattaggtttgaa 225  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||||| |||||||  | ||||| |||||||||||||||||||||    
T  13985278 ttgattcaccttgaaaaaa-cactattaggattgagtctcttggtcacaggaagagattcgggactttgggtagaattaggtttgaa 13985193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 27911076 - 27911229
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt--ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagc 161  Q
    |||||||||||| |||||   |||||||||||| || ||| |||  |||||||||||||||||||||||| |    |  |||||||||||||   ||  |    
T  27911076 agggtttagaaggcaacaacaaaactagggtttgtatagagtttgtctcttggcaacaaacactagggtttga---gggttgattcaccttgggaaa--c 27911170  T
Q  162 actattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||||||| |||| ||||||||||  |||||| |||||||||||||||    
T  27911171 actattaggattgagtctcttggttacgggaagagattgggactttgggtagaattagg 27911229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 27957495 - 27957648
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt--ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagc 161  Q
    |||||||||||| |||||   |||||||||||| || ||| |||  |||||||||||||||||||||||| |    |  |||||||||||||   ||  |    
T  27957495 agggtttagaaggcaacaacaaaactagggtttgtatagagtttgtctcttggcaacaaacactagggtttga---gggttgattcaccttgggaaa--c 27957589  T
Q  162 actattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||||||| |||| ||||||||||  |||||| |||||||||||||||    
T  27957590 actattaggattgagtctcttggttacgggaagagattgggactttgggtagaattagg 27957648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 608890 - 608949
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| | |||||||||||||||| |||||||||||||||    
T  608890 cactattaggattgagtctcttggttatgggaagaggctgggactttgggtagaattagg 608949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 3874166 - 3874225
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  3874166 cactattaggatttagtctcttggttacgggaagaggctgggactttgggtagaattagg 3874225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 27827142 - 27827201
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctggga-cttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| || |||||||||||||| ||||||||||||||||    
T  27827142 cactattaggattgagtctcttggttacaggaagaggctgggaccttgggtagaattagg 27827201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 28251746 - 28251687
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| ||||||| |||||||    
T  28251746 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtaaaattagg 28251687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 43530271 - 43530330
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||||||||  ||| |||||||||||||||||| |||||||||||||||    
T  43530271 cactattaggattgagtctctcggttacgggaagaggctgggactttgggtagaattagg 43530330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 31035133 - 31035206
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattg 138  Q
    |||||||||| |||||   |||||||||||| || ||| ||| |||||||||||||||||||||||||||||||    
T  31035133 ggtttagaagtcaacaagaaaactagggtttgtatagagtttgctcttggcaacaaacactagggttgggattg 31035206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 31162365 - 31162425
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    |||||||||||||||||||| ||||||| |||||||  |||||| ||||||||||||||||    
T  31162365 cactattaggattgagtctcttggtcaccggaagagattgggactttgggtagaattaggt 31162425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 31578458 - 31578390
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggactt-gggtagaattaggtttgaagac 228  Q
    |||| ||| ||||||||||| |||||| ||||||||  |||||||| ||||||||||||||||||||||    
T  31578458 cactgttatgattgagtctcttggtcatgggaagagattgggactttgggtagaattaggtttgaagac 31578390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 18810864 - 18810923
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||| |||||||||| || ||||||||||||    
T  18810864 cactattaggattgagtctcttggttacgggaataggctgggactttaggtagaattagg 18810923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 18813038 - 18813097
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||  |||||||||||||| ||| |||||||||||||||    
T  18813038 cactattaggattgagtctcttgggtacgggaagaggctgtgactttgggtagaattagg 18813097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 33839162 - 33839075
Alignment:
Q  105 tttctcttggcaacaaacactagggttgggattgttt------tgattcaccttgaacaaagcactattaggattgagtctcatggtca 187  Q
    ||||||||||||||||||||||||||||  ||||  |      |||||||||||||| ||| |||||||||||||||||||| ||||||    
T  33839162 tttctcttggcaacaaacactagggttgaaattgaatcaccattgattcaccttgaagaaa-cactattaggattgagtctcttggtca 33839075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 15809356 - 15809433
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| | ||  |||||||||||||||||||| |||| |||||||||  || |||| |||||||||||||||    
T  15809356 ttgattcaccttggaaaa--cactattaggattgagtctcttggttacgggaagaaactaggactttgggtagaattagg 15809433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 33021155 - 33021079
Alignment:
Q  83 acaaactagggtttatagagaatttctcttggcaacaaaca---ctagggttgggattgttttgattcaccttgaacaa 158  Q
    |||||||||| |||||| ||| |||||||| ||||||||||   ||||| ||| |||||||||||||||||||||||||    
T  33021155 acaaactagg-tttatataga-tttctcttagcaacaaacaacactaggattgagattgttttgattcaccttgaacaa 33021079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 14419370 - 14419311
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||| ||||||||||| |||| ||||||||||  |||||| |||||||||||||||    
T  14419370 cactattaagattgagtctcttggttacgggaagagattgggactttgggtagaattagg 14419311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 27107076 - 27107017
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  || ||| |||||||||||||||    
T  27107076 cactattaggattgagtctcttggttacgggaagagattgtgactttgggtagaattagg 27107017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 196
Target Start/End: Complemental strand, 30480682 - 30480647
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagag 196  Q
    |||||||||||||||||||| |||||||||||||||    
T  30480682 cactattaggattgagtctcttggtcacgggaagag 30480647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 32339465 - 32339524
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||| | |||||||||||||||    
T  32339465 cactattaggattgagtctcttggttacgggaagagattggggctttgggtagaattagg 32339524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 1225322 - 1225380
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattag 218  Q
    |||||||||||||||||||| |||| ||||||||||  |||| | ||||||||||||||    
T  1225322 cactattaggattgagtctcttggttacgggaagagattggggctttgggtagaattag 1225380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 11701155 - 11701102
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaaga 195  Q
    ||||||||||||||| ||| || |||||| |||||||||| ||||||||||||||    
T  11701155 ttgattcaccttgaagaaa-cattattagaattgagtctcttggtcacgggaaga 11701102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 14477434 - 14477491
Alignment:
Q  163 ctattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||| |||| ||||||||||  || ||| |||||||||||||||    
T  14477434 ctattaggattgagtctcttggttacgggaagagattgagactttgggtagaattagg 14477491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 15072848 - 15072926
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaaga-ggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| | ||  |||||||||||||||||||| |||| ||| ||||| || |||||| |||||||||||||||    
T  15072848 ttgattcaccttggaaaa--cactattaggattgagtctcttggttacgagaagagggttgggactttgggtagaattagg 15072926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 28283398 - 28283338
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    ||||||||||||||| |||| |||| ||||||||||  |||| | ||||||||||||||||    
T  28283398 cactattaggattgaatctcttggttacgggaagagattggggctttgggtagaattaggt 28283338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 164; Significance: 8e-88; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 36 - 227
Target Start/End: Complemental strand, 4144986 - 4144796
Alignment:
Q  36 tgtagaaacaaaacactgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttggga 135  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  4144986 tgtagaaacaaaacactgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaa-aaacactagggttgaga 4144888  T
Q  136 ttgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaaga 227  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  4144887 ttgttttgattcaccttgaacaaaacactattaggattgagtctcttggtcacgggaagagactgggacttgggtagaattaggtttgaaga 4144796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 25133966 - 25134141
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  25133966 tgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactatggttgtgattgttttgattcacct 25134064  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25134065 tgaacaaatcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 25134141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 9526368 - 9526536
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  9526368 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaa 9526466  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9526467 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 9526536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 21353626 - 21353458
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  21353626 aaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggtaacaa-cactagggttgggattgttttgattcaccttgaacaa 21353528  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21353527 cgcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 21353458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 55 - 228
Target Start/End: Complemental strand, 2393566 - 2393394
Alignment:
Q  55 gtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttga 154  Q
    |||||||| | ||||||||||||||||| ||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  2393566 gtagaaaacaaggtttagaagccaacatgcaaactaaggtttatagagaatttctcttggcaataa-cactagggttgggattgttttgattcaccttga 2393468  T
Q  155 acaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||| |||||||||    
T  2393467 acaaagcactattaggattgagtctcttggtcacgggaatagtctgggacttgggtagaattagatttgaagac 2393394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 9521624 - 9521785
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    ||||||||||||||||||||||||||||||||||||||||||    
T  9521624 ggtttagaaaccaacatacaaactagggtttatagagaatttctcttggtaacattt-ctagggttgggattgttttgattcaccttgaacaaagcacta 9521722  T
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  9521723 ttaggattgagtctcttgatcacgggaagaggctgggacttgggtagaattaggtttgaagac 9521785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 2232516 - 2232667
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2232516 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctttagggttgggattgttttgattcaccttgaacaaaacactattaggattga 2232614  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2232615 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 2232667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 92 - 228
Target Start/End: Complemental strand, 2401468 - 2401333
Alignment:
Q  92 ggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacggg 191  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2401468 ggtttatagagaatttctcttggcaacaa-cactagggttgagattgttttgattcaccttgaacaaagcactattaggattgagtctcttggtcacggg 2401370  T
Q  192 aagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||||||||||||||||||    
T  2401369 aagaggctgggacttgggtagaattaggtttgaagac 2401333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 3091394 - 3091218
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  3091394 tgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggtaacaaacactagggttgagattgttttgattcacct 3091295  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||| |||   |||||||||||||| |||| || |||||||  || |||||| ||||||||| ||||||||||    
T  3091294 tgaacaaaacaccgctaggattgagtctcttggtaacaggaagagattgagacttgagtagaattaagtttgaagac 3091218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 14996935 - 14997110
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| ||||||| || |||||||||||||||||||||||| ||||||||    
T  14996935 tgtgtagaaaacagggtttagaagccaacaaacaaactagggtttataaagaatt-ctcttggtaataaacactagggttgggattgtttttattcacct 14997033  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||| |||| ||||||||||||||| |||| || |||||||  || |||||||||||||||||||||||||||    
T  14997034 tgaacaaaacactgttaggattgagtctcttggttactggaagagattgagacttgggtagaattaggtttgaagac 14997110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 46783045 - 46783215
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||  |||| ||||||||||||||||||| ||| |||||||||||||||||||||    
T  46783045 aaaatagggtttagaagccaacaaacaaactatggtttatagagaatta-tctttgcaacaaacactagggttgagatcgttttgattcaccttgaacaa 46783143  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctggga--cttgggtagaattaggtttgaagac 228  Q
    |||||| ||||||| ||| ||| |||||||  ||||||  |  ||   ||||||||||||||||||||||||    
T  46783144 agcactgttaggatagagactcttggtcacatgaagagattcagaactttgggtagaattaggtttgaagac 46783215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 28279277 - 28279433
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    |||||||||||||| |   ||| |||||||| |||||  || |||||| ||||||||||||||||||||||||     |||| ||||| | ||| |||||    
T  28279277 ggtttagaagccaataacaaaattagggtttgtagagt-ttgctcttgacaacaaacactagggttgggattg-----attccccttggagaaa-cacta 28279369  T
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    |||||||||||  || |||||||||||||||  |||||| || |||||||||||||||||||||    
T  28279370 ttaggattgagcttcttggtcacgggaagagattgggacttttggtagaattaggtttgaagac 28279433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 27916505 - 27916662
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    ||||||||||||||| ||   |||||||||||| |||||  || |||||||||||||||||||||||||| |     |||||||||||||   ||| |||    
T  27916505 agggtttagaagccagcaagaaaactagggtttgtagagt-ttgctcttggcaacaaacactagggttggaa-----ttgattcaccttg--gaaaacac 27916596  T
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    |||||| |||||||||| |||||||  ||||||  || ||| |||||| |||||||||||||||||    
T  27916597 tattagaattgagtctcttggtcacatgaagagattgtgactttgggtggaattaggtttgaagac 27916662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 225
Target Start/End: Original strand, 14352970 - 14353132
Alignment:
Q  69 ttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg------ttttgattcaccttgaacaaagca 162  Q
    |||||||||||||   |||||||||||| |||||| |||||||||||||||||||||||| ||| |||||        ||||||||||||| | ||| ||    
T  14352970 ttagaagccaacaacaaaactagggtttgtagaga-tttctcttggcaacaaacactaggtttgagattgaatcaccattgattcaccttggagaaa-ca 14353067  T
Q  163 ctattaggattgagtctcatggtcacgggaagaggct-gggac-ttgggtagaattaggtttgaa 225  Q
    ||||||||||| |||||| ||||||||| |||||  | | ||| |||||||||||||||||||||    
T  14353068 ctattaggatttagtctcttggtcacggaaagagattcgagactttgggtagaattaggtttgaa 14353132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 2617616 - 2617675
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  2617616 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 2617675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 28840780 - 28840839
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  28840780 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 28840839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 51750139 - 51750198
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  51750139 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 51750198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 42922239 - 42922389
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagca 162  Q
    |||||||||||| |||||   |||||||||||| || ||| ||| ||| | ||||||||||||||||||| | |||     ||||||||||   |||  |    
T  42922239 agggtttagaagtcaacaagaaaactagggtttgtatagagtttgctcctagcaacaaacactagggttgaggttg-----attcaccttgcgaaaa--a 42922331  T
Q  163 ctattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||    
T  42922332 ctattaggattgagtctcttggtcacgggaagagattgggactttgggtagaattagg 42922389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 219
Target Start/End: Complemental strand, 15669621 - 15669516
Alignment:
Q  108 ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-tt 206  Q
    ||||||||||||||||||||||||||| |||     ||||||||||   ||  |||||||||||||||||||| |||||||||||||||  || ||| ||    
T  15669621 ctcttggcaacaaacactagggttggggttg-----attcaccttgggaaa--cactattaggattgagtctcttggtcacgggaagagattgagacttt 15669529  T
Q  207 gggtagaattagg 219  Q
    |||||||||||||    
T  15669528 gggtagaattagg 15669516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 15295015 - 15294955
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    |||||||||||||||||||| |||| ||||||||||| |||||| ||||||||||||||||    
T  15295015 cactattaggattgagtctcttggttacgggaagaggttgggactttgggtagaattaggt 15294955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 152
Target Start/End: Complemental strand, 20566947 - 20566857
Alignment:
Q  58 gaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacctt 152  Q
    ||||| ||||||||||||| |||| |||||||| |||| |||||   ||||||||| | ||||||||||||||| ||||| ||||||||||||||    
T  20566947 gaaaacagggtttagaagcaaaca-acaaactaaggttaataga---tttctcttgacgacaaacactagggttaggattattttgattcacctt 20566857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 155806 - 155873
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaaga 227  Q
    ||||||||||||||| |||| |||||||||||||||  |||||| |||| ||||||||||||||||||    
T  155806 cactattaggattgaatctcttggtcacgggaagagattgggactttggatagaattaggtttgaaga 155873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 20291557 - 20291616
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| ||||||||||||||| || |||| |||||||||||||||    
T  20291557 cactattaggattgagtctcttggtcacgggaagagactaggactttgggtagaattagg 20291616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 21948369 - 21948310
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||| |||||||| |||||||||||||||    
T  21948369 cactattaggattgagtctcttggttacgggaagacgctgggactttgggtagaattagg 21948310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 24325763 - 24325822
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||    
T  24325763 cactattaggattgagtctcttggttacgggaagaggctgtgactttgggtagaattagg 24325822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 46431888 - 46431829
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||||||    
T  46431888 cactattaggattgagtctcttggttacgggaagaggatgggactttgggtagaattagg 46431829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 49959047 - 49959183
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg------ttttgattcaccttgaaca 157  Q
    ||||||||||||||||||   |||||| ||||| ||||||||  |||||||||||||||| ||||||||| ||||      | ||||||||||||| | |    
T  49959047 agggtttagaagccaacaacaaaactatggtttgtagagaatc-ctcttggcaacaaacattagggttggaattgaatcactattgattcaccttggaga 49959145  T
Q  158 aagcactattaggattgagtctcatggtcacgggaagag 196  Q
    || ||||||||||| |||||||| |||||| | ||||||    
T  49959146 aa-cactattaggaatgagtctcttggtcatgagaagag 49959183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 51757631 - 51757690
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||    
T  51757631 cactattaggattgagtctcttggttacgggaagaggctgagactttgggtagaattagg 51757690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 30738901 - 30738744
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    ||||||||||| | || | ||||||||||||||| ||||| |||||||  ||   | |||||||||||| |||||     |||||||||| | ||  |||    
T  30738901 agggtttagaaacaaaaaaacaaactagggtttagagaga-tttctctaagcgggagacactagggttgagattg-----attcaccttggaaaa--cac 30738810  T
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggactt-gggtagaattaggtttgaagac 228  Q
    ||||||||||||||||| ||||||  |||||||  ||||| || ||||||||||||||||||||||    
T  30738809 tattaggattgagtctcttggtcataggaagagattgggattttgggtagaattaggtttgaagac 30738744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 219
Target Start/End: Original strand, 48665204 - 48665337
Alignment:
Q  85 aaactagggtttatagagaattt--ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    ||||||||||||||| ||| |||  ||||| | |||||||||||||||| |    |  ||||||||||||||  ||  |||||||||||||||||||| |    
T  48665204 aaactagggtttatatagagtttgtctctttggaacaaacactagggtttga---gggttgattcaccttgagaaa--cactattaggattgagtctctt 48665298  T
Q  183 ggtca-cgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||| | ||||||||||||||||| |||||||||||||||    
T  48665299 ggttaccgggaagaggctgggactttgggtagaattagg 48665337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 13127905 - 13127832
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttc-tcttggcaacaaacactagggttgggat 136  Q
    ||||||||||||||||||   ||| ||||||||||| ||| |||| | ||||||||||||||||||||||||||    
T  13127905 agggtttagaagccaacaagaaaagtagggtttatatagagtttccttttggcaacaaacactagggttgggat 13127832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 16428735 - 16428813
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    ||||||||||||| | ||  |||||||||||||||||||| |||| ||||||||||  |||||| ||||||||||||||||    
T  16428735 ttgattcaccttggaaaa--cactattaggattgagtctcttggttacgggaagagattgggactttgggtagaattaggt 16428813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 13125635 - 13125572
Alignment:
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggactt-gggtagaattaggtttgaagac 228  Q
    ||||||||||| ||| |||||| ||||||||  |||||||| ||||||||||||||||||||||    
T  13125635 ttaggattgaggctcttggtcaagggaagagattgggactttgggtagaattaggtttgaagac 13125572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 13761937 - 13761996
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||| ||| ||| |||||||||||||||    
T  13761937 cactattaggattgagtctcttggttacgggaagagtctgtgactttgggtagaattagg 13761996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 13785531 - 13785383
Alignment:
Q  86 aactagggtttatagagaatttctcttggcaacaaacactagggttgggattg------ttttgattcaccttgaacaaagcactattaggattgagtct 179  Q
    ||||||||||| |||||| |||||||||||||||||||||||| ||| ||  |      | |||||||||||| |||||| ||| ||||||||||||| |    
T  13785531 aactagggtttgtagaga-tttctcttggcaacaaacactaggattgagaacgaatccctcttgattcaccttaaacaaa-cacaattaggattgagttt 13785434  T
Q  180 catggtcacgggaagaggct-gggac-ttgggtagaattaggtttgaagac 228  Q
    | |||||||   |||||  | ||||| ||||||||||||||||||||||||    
T  13785433 cttggtcacaaaaagagattcgggactttgggtagaattaggtttgaagac 13785383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 17324817 - 17324758
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||||| |||||||||||||||    
T  17324817 cactattaggattgagtctcttggttacgggaagagattgggactttgggtagaattagg 17324758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 28842595 - 28842654
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||  |||| |||||||||||||| ||| |||||||||||||||    
T  28842595 cactattaggattgagtctattggttacgggaagaggctgagactttgggtagaattagg 28842654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 31735702 - 31735643
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||| | ||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  31735702 cactattaaggttgagtctcttggttacgggaagaggctgggactttgggtagaattagg 31735643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 39462619 - 39462678
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||||| |||||||||||||||    
T  39462619 cactattaggattgagtctcttggttacgggaagagattgggactttgggtagaattagg 39462678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 4131560 - 4131502
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| || ||||||||||||   |||||||||||||||    
T  4131560 cactattaggattgagtctcttggttacaggaagaggctggactttgggtagaattagg 4131502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 6115302 - 6115225
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||| ||  |||||||||||||||||||| |||||||  ||||||  || ||| |||||||||||||||    
T  6115302 ttgattcaccttgaaaaa--cactattaggattgagtctcttggtcacatgaagagattgagactttgggtagaattagg 6115225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 38925677 - 38925600
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| | ||  |||||||||||||||||||| |||| ||||||||||  || ||| |||||||||||||||    
T  38925677 ttgattcaccttggaaaa--cactattaggattgagtctcttggttacgggaagagattgagactttgggtagaattagg 38925600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 47906352 - 47906429
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||  ||  |||||||||||||||||||| |||| ||||||||||  |||| | |||||||||||||||    
T  47906352 ttgattcaccttgagaaa--cactattaggattgagtctcttggttacgggaagagattggggctttgggtagaattagg 47906429  T

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Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 10400009 - 10399950
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||||| || ||||||||||||    
T  10400009 cactattaggattgagtctcttggttacgggaagagattgggactttcggtagaattagg 10399950  T

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Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 12302686 - 12302627
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||||| || ||||||||||||    
T  12302686 cactattaggattgagtctcttggttacgggaagagattgggactttaggtagaattagg 12302627  T

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Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 13215181 - 13215240
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||| ||||||||||| |||| ||||||||||  |||||| |||||||||||||||    
T  13215181 cactattatgattgagtctcttggttacgggaagagattgggactttgggtagaattagg 13215240  T

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Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 196
Target Start/End: Complemental strand, 14183845 - 14183738
Alignment:
Q  83 acaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctca 181  Q
    |||||||||||||| || |||  || |||||||||||||||||||||||||||      |||||||||||||   ||| ||||||||  ||||||||||     
T  14183845 acaaactagggtttgtatagaggttgctcttggcaacaaacactagggttggg-----gttgattcaccttg--gaaaacactattataattgagtctct 14183753  T
Q  182 tggtcacgggaagag 196  Q
    |||| ||||||||||    
T  14183752 tggttacgggaagag 14183738  T

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Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 15823646 - 15823705
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||  |||||||||| |||| |||||||||||||| ||| |||||||||||||||    
T  15823646 cactattaatattgagtctcttggttacgggaagaggctgagactttgggtagaattagg 15823705  T

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Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 18307209 - 18307268
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||| | |||||||||||||||    
T  18307209 cactattaggattgagtctcttggttacgggaagagattggggctttgggtagaattagg 18307268  T

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Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 20302559 - 20302618
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| | |||||||| || |||| |||||||||||||||    
T  20302559 cactattaggattgagtctcttggttatgggaagagactaggactttgggtagaattagg 20302618  T

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Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 25251456 - 25251397
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||||||||  ||| ||||||||||  |||||| |||||||||||||||    
T  25251456 cactattaggattgagtctctcggttacgggaagagattgggactttgggtagaattagg 25251397  T

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Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 27337120 - 27337061
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||| ||||| |||| |||||||||||||| ||| ||||||| |||||||    
T  27337120 cactattaggattgggtctcttggttacgggaagaggctgtgactttgggtaaaattagg 27337061  T

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Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 37990682 - 37990744
Alignment:
Q  70 tagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgg 133  Q
    ||||||||||||   |||||||| ||| |||||| ||||||| |||||||||||||||||||||    
T  37990682 tagaagccaacaacaaaactaggatttgtagaga-tttctctcggcaacaaacactagggttgg 37990744  T

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Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 39932173 - 39932232
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||| |||| |||| |||||||||| ||| ||| |||||||||||||||    
T  39932173 cactattaggattgaatctcttggttacgggaagagactgagactttgggtagaattagg 39932232  T

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Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 50076853 - 50076794
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctggg-acttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||| | |||||||||||||||    
T  50076853 cactattaggattgagtctcttggttacgggaagagattgggaatttgggtagaattagg 50076794  T

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Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 50307727 - 50307668
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||| | |||||||||||||||    
T  50307727 cactattaggattgagtctcttggttacgggaagagattggggctttgggtagaattagg 50307668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 51752465 - 51752523
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||| |||||||||| |||| |||||||||||||| ||| |||||||||||||||    
T  51752465 cactattag-attgagtctcttggttacgggaagaggctgagactttgggtagaattagg 51752523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 26332831 - 26332763
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttggg 134  Q
    |||||||||||||||||| | ||| |||||||| |||||  || ||||||||||||||||||||| |||||    
T  26332831 agggtttagaagccaacacaaaaa-tagggtttgtagagt-ttgctcttggcaacaaacactaggtttggg 26332763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 27339310 - 27339252
Alignment:
Q  162 actattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||| ||||||||||| | || |||||||||||||| ||| |||||||||||||||    
T  27339310 actattacgattgagtctcttagttacgggaagaggctgagactttgggtagaattagg 27339252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 219
Target Start/End: Complemental strand, 50079075 - 50078943
Alignment:
Q  85 aaactagggttt--atagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    ||||||||||||  ||||||  | |||||||| |||||||||||||||| |    |  ||||||||||||| | ||  ||||||||||||| |||||| |    
T  50079075 aaactagggtttgcatagagtttgtctcttgggaacaaacactagggtttga---gggttgattcaccttggaaaa--cactattaggattaagtctctt 50078981  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||| ||||||||||  | |||| |||||||||||||||    
T  50078980 ggttacgggaagagatttggactttgggtagaattagg 50078943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 14098169 - 14098116
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagag 196  Q
    ||||||||||||| | ||  |||||||||||||||||||| |||| ||||||||||    
T  14098169 ttgattcaccttggaaaa--cactattaggattgagtctcttggttacgggaagag 14098116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 26613422 - 26613354
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggactt-gggtagaattaggtttgaagac 228  Q
    ||||||| |||||||||| | ||||||| |||||||  || | ||| ||||||||||||||||||||||    
T  26613422 cactattcggattgagtcacttggtcacaggaagagattgaggctttgggtagaattaggtttgaagac 26613354  T

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Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 96)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 21 - 228
Target Start/End: Original strand, 3329756 - 3329963
Alignment:
Q  21 gagagagtgagagagtgtagaaacaaaacactgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa 120  Q
    ||||||||||||| |||||||||||||||| |||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  3329756 gagagagtgagagtgtgtagaaacaaaacattgtagagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaataa 3329855  T
Q  121 acactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggt 220  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||||||||||||||||||||    
T  3329856 acactagggttgggaatgttttgattcaccttgaacaaagcactattaggattcagttagttggtcacgggaagaggctgggacttgggtagaattaggt 3329955  T
Q  221 ttgaagac 228  Q
    ||||||||    
T  3329956 ttgaagac 3329963  T

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Target: chr3; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 10896907 - 10897075
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10896907 aaaatagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 10897005  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10897006 agcactattaggattgattctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 10897075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 29914233 - 29914065
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29914233 aaaacagggtttagaagccaacattcaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 29914135  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29914134 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 29914065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 47878451 - 47878283
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47878451 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 47878353  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  47878352 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 47878283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 10613058 - 10612890
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10613058 aaaatagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 10612960  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  10612959 agcactattaagattgagtttcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 10612890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 47883169 - 47882994
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  47883169 tgtgtagaaaacaggatttagaagccaacatacaaactagggtttatagataatttctcttggcaacaa-cactatggttgggattgttttgattcacct 47883071  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  47883070 tgaacaaaacactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 47882994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 54193127 - 54193296
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgtttt-gattcaccttgaaca 157  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  54193127 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgtttttgattcaccttgaaca 54193225  T
Q  158 aagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  54193226 aagcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 54193296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 27762261 - 27762098
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  27762261 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgagattgttttgattcaccttaaacaaagcac 27762163  T
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  27762162 tattaggattgagtctcttggtcacgggaagaggttgggacttgggtagaattaggtttgaagac 27762098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 5858448 - 5858614
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5858448 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 5858546  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  5858547 aacactattaggattgagtct--tggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 5858614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 38002760 - 38002939
Alignment:
Q  48 acactgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattc 147  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  38002760 acactgtgtagaaaacaggatttagaagtcaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgagattgttttgattc 38002858  T
Q  148 accttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||| ||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  38002859 accttgaacaaaacaccattaggtttgagtctcttggtcacgggaagaggctgggacttgggtagaattaagtttgaagac 38002939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 22626264 - 22626099
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22626264 aaaacagggtttagaaaccaacatacaaactagggtttatggagaatttctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaa 22626166  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaa 225  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22626165 aacactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaa 22626099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 10595321 - 10595146
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| | ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||     
T  10595321 tgtgtagaaaaaaaggtttagaaaccaacatacaaactagggtttatagagaatttatcttggcaacaa-cactagggtttggattgttttgattcacca 10595223  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  10595222 tgaacaaagcactattaggattaagtctcttggtcacgggaagaggctgagacttgggtagaattaggtttgaagac 10595146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 10949546 - 10949372
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| | |||||||||||||||||    
T  10949546 tgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-ctctagggttcg-attgttttgattcacct 10949449  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  10949448 tgaacaaagtactattaggattgagtctcttggtcacgggaagaggctggaacttgggttgaattaggtttgaagac 10949372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 11079424 - 11079587
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||    
T  11079424 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcatcttgaacaaaacac 11079522  T
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||    
T  11079523 tatcaggattgagtctcttggtcacgggaaaaggctgggacttaggtagaattaggtttgaagac 11079587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 54188410 - 54188579
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgtttt-gattcaccttgaaca 157  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  54188410 aaaacagggtttagaaaccaacatacaaactaaggtttatagagaatttctcttggcaacaa-cactaggtttgggattgtttttgattcaccttgaaca 54188508  T
Q  158 aagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  54188509 aagcactattagaattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 54188579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 16462112 - 16462273
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||| |||||    
T  16462112 ggtttagaaaccaacatacaaactagggtttacagagaatttctcttagcaacaacta-tagggttgggattgttttgattcaccttgaacaaaacacta 16462210  T
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16462211 ttaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 16462273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 20031574 - 20031430
Alignment:
Q  83 acaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20031574 acaaactaggctttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctctt 20031476  T
Q  183 ggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  20031475 ggtcacgggaagaggctgggacttgggtaaaattaggtttgaagac 20031430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 10094337 - 10094186
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10094337 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 10094239  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10094238 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 10094186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 10201217 - 10201066
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10201217 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 10201119  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10201118 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 10201066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 10100354 - 10100203
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10100354 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 10100256  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  10100255 gtctcttggtcacgggaagaggctgggacttgggtaaaattaggtttgaagac 10100203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 10208263 - 10208112
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  10208263 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattacgattga 10208165  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10208164 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 10208112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 4535516 - 4535684
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  4535516 aaaacagggtttagaagccaacatacaaactagggttcatagagaatttctcttggcaacaa-cactagggttgggtttgttttgattcactttgaacaa 4535614  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    | |||  ||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||    
T  4535615 aacaccgttaggattgagtctcttggttacgggaagaggttgggaattgggtagaattaggtttgaagac 4535684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 6303229 - 6303380
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6303229 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 6303327  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||||||||||    
T  6303328 gtctcttggtcacgggaagaggctgggacttgggtatagttaggtttgaagac 6303380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 27544192 - 27544343
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27544192 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 27544290  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||  ||| ||||||||||||||||||||||||||    
T  27544291 gtctcttggtcacgggaagagcgtggaacttgggtagaattaggtttgaagac 27544343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 13893356 - 13893532
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgtttt-gattcacc 150  Q
    ||||||||||| | |||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  13893356 tgtgtagaaaacaaggtttagaagtcaacataaaaactagggtttatagagaatt-ctcttggcaacaaacactagggttgggattgtttttgattcacc 13893454  T
Q  151 ttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||  ||  |||| |||||||||| |||||||||||||||  || |||||||||| ||||||||||||||||    
T  13893455 ttgaacaaaataccgttagaattgagtctcttggtcacgggaagagattgagacttgggtaaaattaggtttgaagac 13893532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 16996784 - 16996945
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||| || ||||||||||||||| | ||||||||||||||| ||| ||| ||||     
T  16996784 ggtttagaagccaacaaacaaactagggtttatagagaatt-ctcttggtaataaacactagggttggaaatgttttgattcacctagaataaaacactg 16996882  T
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||| ||||||||| ||||   ||||| ||||||||||||||||||||||||    
T  16996883 ttaggattgagtctcttggtcacggaaagaaattgggatttgggtagaattaggtttgaagac 16996945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 7417964 - 7418134
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    |||||||||||  ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || ||||| ||     |||||||| ||||||||    
T  7417964 tgtgtagaaaacggggtttagaagccaacataaaaactagggtttataaagaatttctcttggcaataa-cactaagg-----attgttttaattcacct 7418057  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||| ||| |||| ||||||||||  |||||||||||||||  |||||||||| |||| ||||||||||||||    
T  7418058 tgaacaaaacaccattatgattgagtctattggtcacgggaagagattgggacttggctagagttaggtttgaagac 7418134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 26762941 - 26763108
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| | |||| |||||||||| |||||||||| |||||| ||| ||||||||||||||||| ||||| |||||||||||||| ||||    
T  26762941 aaaacagggtttagaaacgaaca-acaaactaggatttatagaga-tttctcctgggaacaaacactagggttgtgattgatttgattcaccttggacaa 26763038  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggct-gggactt-gggtagaattaggtttgaag 226  Q
    | || |||||||||  |||||| |||| | |||||||   | | ||||| ||||||||||||||||||||    
T  26763039 aacattattaggataaagtctcttggttatgggaagaaattcgagacttcgggtagaattaggtttgaag 26763108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 46966923 - 46966760
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    ||||||||||||||||||   ||| || |||||||||||| || ||||||||||||||||||||||||| |||||||| |||||| ||| |||||| ||     
T  46966923 agggtttagaagccaacaacaaaattaaggtttatagaga-ttcctcttggcaacaaacactagggttgagattgtttcgattcatcttaaacaaaacaa 46966825  T
Q  164 tattaggattgagtctcatggtcacgggaagaggct-gggac-ttgggtagaattaggtttgaagac 228  Q
    | ||||||  ||||||| || |||||| || ||  | ||||| ||||||||||||||||||||||||    
T  46966824 tgttagga--gagtctcttgctcacggaaaaagattcgggactttgggtagaattaggtttgaagac 46966760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 15823882 - 15823791
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaa 159  Q
    ||||| |||||||||| ||||||||||||||||||||  |||||||| | |||||||||||||| || ||||||||||||||||||||||||||    
T  15823882 ggtttggaagccaaca-acaaactagggtttatagagt-tttctctttgaaacaaacactagggctgagattgttttgattcaccttgaacaaa 15823791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 48390500 - 48390444
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggc 115  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48390500 aaaacagggtttagaagccgacatacaaactagggtttatagagaatttctcttggc 48390444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 172
Target Start/End: Complemental strand, 27703443 - 27703338
Alignment:
Q  66 ggtttagaagccaacatacaaactagggttta-tagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcact 164  Q
    ||||||||||| |||| | ||||||||||||  |||||| |||||||||||| ||||||||||| || ||||||||||||||||||||||||||| || |    
T  27703443 ggtttagaagcaaaca-agaaactagggttttgtagaga-tttctcttggcatcaaacactaggatttggattgttttgattcaccttgaacaaaacatt 27703346  T
Q  165 attaggat 172  Q
     |||||||    
T  27703345 gttaggat 27703338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 36871570 - 36871411
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagca 162  Q
    |||||||| |||||||||   ||||||||| || || ||| ||| ||||||||||||||||| |||||| ||||||     |||||||||| | ||  ||    
T  36871570 agggtttacaagccaacaagaaaactagggcttgtatagagtttgctcttggcaacaaacaccagggttaggattg-----attcaccttggaaaa--ca 36871478  T
Q  163 ctattaggattgagtctcatggtcacgggaagaggctgggactt-gggtagaattaggtttgaagac 228  Q
    || ||| ||||||||||| ||||||||| |||||  |||||||| ||||||||||||||||||||||    
T  36871477 ctgttaagattgagtctcttggtcacggaaagagattgggactttgggtagaattaggtttgaagac 36871411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 4104072 - 4104013
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  4104072 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 4104013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 5191733 - 5191792
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  5191733 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 5191792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 5522803 - 5522744
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  5522803 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 5522744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 7606764 - 7606705
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  7606764 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 7606705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 18097077 - 18097018
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  18097077 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 18097018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 18099347 - 18099288
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  18099347 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 18099288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 42990384 - 42990443
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  42990384 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 42990443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 43226165 - 43226224
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  43226165 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 43226224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 43228371 - 43228430
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  43228371 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 43228430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 31151334 - 31151484
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagca 162  Q
    |||||||||||  |||||   |||||||||||| || ||| ||| ||||||||||||||||| ||||||||| |||     ||||||||||   ||  ||    
T  31151334 agggtttagaaatcaacaagaaaactagggtttgtatagagtttgctcttggcaacaaacaccagggttggggttg-----attcaccttgggaaa--ca 31151426  T
Q  163 ctattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||| |||||||||||| ||  |||||| |||||||||||||||    
T  31151427 ctattaggattgagtctcttggtcacgggaaaagattgggactttgggtagaattagg 31151484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 226
Target Start/End: Complemental strand, 1620709 - 1620573
Alignment:
Q  83 acaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    ||||||||||||||| ||||| ||||||| |||   | ||||||||||||||||||     |||||||||| | ||  |||||||||||||  ||||  |    
T  1620709 acaaactagggtttagagaga-tttctctaggcgggagacactagggttgggattg-----attcaccttggaaaa--cactattaggattaggtctttt 1620618  T
Q  183 ggtcacgggaagaggctgggactt-gggtagaattaggtttgaag 226  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||    
T  1620617 ggtcacgggaagagattgggactttgggtagaattaggtttgaag 1620573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 1321510 - 1321618
Alignment:
Q  107 tctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-t 205  Q
    |||||||| |||||||||||||||| |   ||  |||||||||||||   ||  |||||||||||||||||||| |||| || ||||||||||||||| |    
T  1321510 tctcttgggaacaaacactagggtttg---tgggttgattcaccttgggaaa--cactattaggattgagtctcttggttacaggaagaggctgggactt 1321604  T
Q  206 tgggtagaattagg 219  Q
    ||||||||||||||    
T  1321605 tgggtagaattagg 1321618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 3859608 - 3859667
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||    
T  3859608 cactattaggattgagtctcttggttacgggaagaggctgagactttgggtagaattagg 3859667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 4308458 - 4308399
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||||||    
T  4308458 cactattaggattgagtctcttggttacgggaagaggttgggactttgggtagaattagg 4308399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 7768559 - 7768680
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaac--actagggttgggattgttttgattcaccttgaacaaagc 161  Q
    |||||||||||||||||||  |||||| ||||| ||||||| |||||||||||||||||  |||| ||||| ||     |||||||||||||   ||| |    
T  7768559 agggtttagaagccaacatcaaaactaaggtttgtagagaa-ttctcttggcaacaaacaaactaaggttgaga-----ttgattcaccttg--gaaaac 7768650  T
Q  162 actattaggattgagtctcatggtcacggg 191  Q
    ||||||||||||||||||| || |||||||    
T  7768651 actattaggattgagtctcttgctcacggg 7768680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 10084566 - 10084507
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||| ||||||| |||| |||||||||||||||||| |||||||||||||||    
T  10084566 cactattaggatcgagtctcttggttacgggaagaggctgggactttgggtagaattagg 10084507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 13420433 - 13420304
Alignment:
Q  84 caaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    ||||||||||||| || ||| ||| |||| |||||||||||||||||||| |      |||||||||||||   ||  |||||||||||||||||||| |    
T  13420433 caaactagggtttgtatagagttttctctaggcaacaaacactagggttgag------ttgattcaccttgggaaa--cactattaggattgagtctctt 13420342  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||  || ||| |||||||||||||||    
T  13420341 ggtcacgggaagagattgagactttgggtagaattagg 13420304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 22114482 - 22114423
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctggga-cttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||  |||||||||||||||    
T  22114482 cactattaggattgagtctcttggttacgggaagaggctgggattttgggtagaattagg 22114423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 25688338 - 25688279
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||| |||||||||||||| |||||||||||||||    
T  25688338 cactattaggattgagtctcttggttacgagaagaggctgggactttgggtagaattagg 25688279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 45883019 - 45883078
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||||||    
T  45883019 cactattaggattgagtctcttggttacgggaagaggttgggactttgggtagaattagg 45883078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 25635390 - 25635520
Alignment:
Q  84 caaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    ||||||||||||| || | | ||| ||||||||||||||||||||||||||||     ||| |||||||||    || ||||||||||||| |||||| |    
T  25635390 caaactagggtttgtatatagtttgctcttggcaacaaacactagggttggga-----ttggttcaccttg--ggaaacactattaggatttagtctctt 25635482  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||  || ||| |||||||||||||||    
T  25635483 ggtcacgggaagagattgagactttgggtagaattagg 25635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 26720628 - 26720686
Alignment:
Q  162 actattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||| || |||| |||||||||||||||||| |||||||||||||||    
T  26720628 actattaggattgagtttcttggttacgggaagaggctgggactttgggtagaattagg 26720686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 10956201 - 10956145
Alignment:
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||    
T  10956201 tattaggattgagtctcttggttacgggaagaggctgagactttgggtagaattagg 10956145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 13419872 - 13419943
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg 138  Q
    |||||| |||||||||   |||||||||||| |||||  || |||||||||||||||||||||||||||||||    
T  13419872 ggtttaaaagccaacaagaaaactagggtttgtagagt-ttgctcttggcaacaaacactagggttgggattg 13419943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 18162743 - 18162803
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    |||||||||||||||||||| |||| ||||||||||  |||||| ||||||||||||||||    
T  18162743 cactattaggattgagtctcttggttacgggaagagattgggactttgggtagaattaggt 18162803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 23633449 - 23633593
Alignment:
Q  68 tttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactat 166  Q
    ||||||||||||||   |||||||||||| || ||  ||| ||||||||||||||||||||||||||| ||| |||     |||  |||     ||||||    
T  23633449 tttagaagccaacaagaaaactagggtttgtatagtgtttgctcttggcaacaaacactagggttggggttgattt-----accgggaaa----cactat 23633539  T
Q  167 taggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||| |||||||||||||||  || ||| |||||||||||||||    
T  23633540 taggattgagtctcttggtcacgggaagagattgagactttgggtagaattagg 23633593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 39715531 - 39715608
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||  ||  |||||||||||||||||||| |||| ||||||||||  |||||| |||||||||||||||    
T  39715531 ttgattcaccttgagaaa--cactattaggattgagtctcttggttacgggaagagattgggactttgggtagaattagg 39715608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 6561890 - 6561949
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||||| |||||||||||||||    
T  6561890 cactattaggattgagtctcttggttacgggaagagattgggactttgggtagaattagg 6561949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 11168181 - 11168240
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctggg-acttgggtagaattagg 219  Q
    ||||||||||||||||| || |||| |||||||||||||||| | |||||||||||||||    
T  11168181 cactattaggattgagtgtcttggttacgggaagaggctgggaatttgggtagaattagg 11168240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 11170484 - 11170543
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||||| || |||| |||||||||||||||||| || ||||||||||||    
T  11170484 cactattaggattgagtgtcttggttacgggaagaggctgggactttaggtagaattagg 11170543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 25533522 - 25533581
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||  |||| |||||||||||||| ||| |||||||||||||||    
T  25533522 cactattaggattgagtcttttggttacgggaagaggctgagactttgggtagaattagg 25533581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 29956766 - 29956825
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||| |||| |||| ||| |||||||||||||| |||||||||||||||    
T  29956766 cactattaggattgaatctcttggttacgagaagaggctgggactttgggtagaattagg 29956825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 30005921 - 30005980
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||| |||| |||| ||| |||||||||||||| |||||||||||||||    
T  30005921 cactattaggattgaatctcttggttacgagaagaggctgggactttgggtagaattagg 30005980  T

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Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 38890120 - 38890179
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||||| |||||||||||||||    
T  38890120 cactattaggattgagtctcttggttacgggaagagattgggactttgggtagaattagg 38890179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 51727184 - 51727125
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||| ||||||||| ||| |||||||||||||||    
T  51727184 cactattaggattgagtctcttggttacggtaagaggctgagactttgggtagaattagg 51727125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 23637012 - 23637162
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagca 162  Q
    ||||||||||||||||||   |||||||||||| || ||| | | |||||||||||||||||||||||     |||  |||||| |||||||   || ||    
T  23637012 agggtttagaagccaacaagaaaactagggtttgtatagagtctgctcttggcaacaaacactagggt-----ttgggttgatttaccttga--gaaaca 23637104  T
Q  163 ctattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||| || ||| |||||||   | |||| |||||||||||||||    
T  23637105 ctattaggattgagtctcttgttcatgggaagatattaggactttgggtagaattagg 23637162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 27420644 - 27420713
Alignment:
Q  68 tttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg 138  Q
    ||||||||||| ||   ||| |||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  27420644 tttagaagccagcaacaaaattagggtttgtagagaattt-tcttggcaacaaacactatggttgggattg 27420713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 11066610 - 11066737
Alignment:
Q  105 tttctcttggcaacaaacactagggttgggattgtt------ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggc 198  Q
    ||||||||||||| |||||||||||||| |||||        ||||||||||||| | ||| ||||||||||||||| |||  || ||||||||||||      
T  11066610 tttctcttggcaataaacactagggttgagattgaaccaccattgattcaccttggagaaa-cactattaggattgaatcttttgatcacgggaagagat 11066708  T
Q  199 t-gggactt-gggtagaattaggtttgaa 225  Q
    | ||||||| |||||||||||||||||||    
T  11066709 tcgggactttgggtagaattaggtttgaa 11066737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 32264216 - 32264159
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaatta 217  Q
    |||||||||||||||||||| |||| | ||||||||||||| || |||||||||||||    
T  32264216 cactattaggattgagtctcttggttatgggaagaggctggaactttgggtagaatta 32264159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 562044 - 561977
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggtt 131  Q
    |||||||||||| ||||||  |||||||||||| || ||| ||| ||||||||||||||||||||||||    
T  562044 agggtttagaagtcaacatg-aaactagggtttgtatagagttttctcttggcaacaaacactagggtt 561977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 1674006 - 1674106
Alignment:
Q  108 ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-tt 206  Q
    |||||||||||||||||||||||| ||||||     ||||||| ||   ||  |||||||||||||||||||| || ||||||||||||  |||||| ||    
T  1674006 ctcttggcaacaaacactagggttaggattg-----attcaccatgggaaa--cactattaggattgagtctcttgatcacgggaagagattgggacttt 1674098  T
Q  207 gggtagaa 214  Q
    ||||||||    
T  1674099 gggtagaa 1674106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 23941726 - 23941810
Alignment:
Q  55 gtagaaaatagggtttagaagccaacatacaaactagggtttatagag-aatttctcttggcaacaaacactagggttgggattg 138  Q
    ||||||||  |||||||||||||||||   |||||||||||| |||||   ||||||||| ||| |||||||| |||||||||||    
T  23941726 gtagaaaaacgggtttagaagccaacaacaaaactagggtttgtagagttttttctcttgacaataaacactaaggttgggattg 23941810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 27101358 - 27101298
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    |||||||||||||||||||| |||| || |||||||  |||||| ||||||||||||||||    
T  27101358 cactattaggattgagtctcttggttacaggaagagaatgggactttgggtagaattaggt 27101298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 53915670 - 53915614
Alignment:
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||||| |||| ||||||||||  |||||| |||||||||||||||    
T  53915670 tattaggattgagtctcttggttacgggaagagattgggactttgggtagaattagg 53915614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 1313489 - 1313548
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| | || ||||||||||  |||||| |||||||||||||||    
T  1313489 cactattaggattgagtctcttagttacgggaagagattgggactttgggtagaattagg 1313548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 5926941 - 5926882
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||||| || ||||||||||||    
T  5926941 cactattaggattgagtctcttggttacgggaagagattgggacttttggtagaattagg 5926882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 9604784 - 9604725
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||| |||||| || ||| |||||||||||||||    
T  9604784 cactattaggattgagtctcttggttacggaaagaggttgagactttgggtagaattagg 9604725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 10958500 - 10958441
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| | ||||||||||||  || |||||||||||||||    
T  10958500 cactattaggattgagtctcttggttatgggaagaggctgacactttgggtagaattagg 10958441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 12268141 - 12268082
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||| | |||||||||||||||    
T  12268141 cactattaggattgagtctcttggttacgggaagagattggggctttgggtagaattagg 12268082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 15780951 - 15781010
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||| ||||||||||| |||| |||||||||||||| ||| || ||||||||||||    
T  15780951 cactattacgattgagtctcttggttacgggaagaggctgagactttcggtagaattagg 15781010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 25633929 - 25633984
Alignment:
Q  84 caaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattg 138  Q
    ||||||||||||| || ||| ||| |||||||||||||||||||||| ||||||||    
T  25633929 caaactagggtttgtatagagtttgctcttggcaacaaacactagggctgggattg 25633984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 180
Target Start/End: Complemental strand, 31021411 - 31021303
Alignment:
Q  65 gggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcact 164  Q
    ||||||||||||||||    |||||||||||| |||||  || | || | |||||||||||||||||||||     ||||||||||||| | ||| ||||    
T  31021411 gggtttagaagccaaccctaaaactagggtttgtagagt-ttgccctagtcaacaaacactagggttggga-----ttgattcaccttggagaaa-cact 31021319  T
Q  165 attaggattgagtctc 180  Q
    ||||||||||||||||    
T  31021318 attaggattgagtctc 31021303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 42297895 - 42297838
Alignment:
Q  104 atttctcttggcaacaaaca---ctagggttgggattgttttgattcaccttgaacaa 158  Q
    ||||||||| ||||||||||   ||||| ||| |||||||||||||||||||||||||    
T  42297895 atttctcttagcaacaaacaacactaggattgagattgttttgattcaccttgaacaa 42297838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 43423640 - 43423581
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||| | |||||||||||||||    
T  43423640 cactattaggattgagtctcttggttacgggaagagattggggctttgggtagaattagg 43423581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 53917841 - 53917782
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctggga-cttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||||  |||||||||||||||    
T  53917841 cactattaggattgagtctcttggttacgggaagagattgggattttgggtagaattagg 53917782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 889949 - 889891
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||   |||  |||||||||||||||    
T  889949 cactattaggattgagtctcttggttacgggaagagttggggctttgggtagaattagg 889891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 1626878 - 1626803
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaatta 217  Q
    ||||||||||||| | ||  |||||||||||||||||||| |||| ||||| ||||  |||||| |||||||||||||    
T  1626878 ttgattcaccttggaaaa--cactattaggattgagtctcttggttacggggagagattgggactttgggtagaatta 1626803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 6231881 - 6231939
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattagg 219  Q
    |||||||||  ||||||||| |||| ||||||||||  ||||| |||||||||||||||    
T  6231881 cactattagtgttgagtctcttggttacgggaagagattgggatttgggtagaattagg 6231939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 10191486 - 10191428
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattagg 219  Q
    |||||||||||| ||||||| |||| || ||||||||||||   |||||||||||||||    
T  10191486 cactattaggatcgagtctcttggttacaggaagaggctggactttgggtagaattagg 10191428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 28102177 - 28102120
Alignment:
Q  163 ctattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||| |||| ||||||||||  |||| | |||||||||||||||    
T  28102177 ctattaggattgagtctcttggttacgggaagagattggggctttgggtagaattagg 28102120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 561954 - 561894
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    ||||||||||||| |||||| |||||||| ||||||  || ||| ||||||||||||||||    
T  561954 cactattaggatttagtctcttggtcacgtgaagagattgagactttgggtagaattaggt 561894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 14634620 - 14634552
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggactt-gggtagaattaggtttgaagac 228  Q
    |||||||||||||| ||||| | |||||| ||||||  || ||||| |||||| |||||||||||||||    
T  14634620 cactattaggattgtgtctcttagtcacgagaagagattgagactttgggtagcattaggtttgaagac 14634552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 48390446 - 48390414
Alignment:
Q  196 ggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||| |||||||||||||||||||||    
T  48390446 ggctgggactttggtagaattaggtttgaagac 48390414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 25410025 - 25410200
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25410025 tgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcacct 25410123  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25410124 tgaacaaaacactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 25410200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 25351248 - 25351423
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  25351248 tgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgagattgttttgattcacct 25351346  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25351347 tgaacaaaacactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 25351423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 25356942 - 25357117
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  25356942 tgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgagattgttttgattcacct 25357040  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25357041 tgaacaaaacactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 25357117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 27 - 228
Target Start/End: Original strand, 21369510 - 21369712
Alignment:
Q  27 gtgagagagtgtagaaa-caaaacactgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacact 125  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  21369510 gtgagagtgtgtagaaaacaaaacactgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaaattctcttggcaacaaacatt 21369609  T
Q  126 agggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaa 225  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||| |||| |||||  ||||||||||||| |||||||||||||    
T  21369610 agggttgagattgttttgattcaccttgaacaaaacactattaggattgagtctcttggttacggaaagagattgggacttgggtaaaattaggtttgaa 21369709  T
Q  226 gac 228  Q
    |||    
T  21369710 gac 21369712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 44016949 - 44016773
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44016949 tgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 44016850  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||||||||| | |||| | ||||||||||||| || || ||||||||||||||||||    
T  44016849 tgaacaaagcactattaggattgagtctcttagtcatgagaagaggctgggaatttggcagaattaggtttgaagac 44016773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 30246872 - 30247040
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  30246872 aaaacagggtttagaagccaacaacaaaactagggtttatagagaatttctcttggcaacaa-cactacggttgggattgttttgattcaccttgaacaa 30246970  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30246971 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 30247040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 44144153 - 44143978
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  ||||||||||||||||||    
T  44144153 tgtgtagaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttttcttggcaacaa-cactagggttatgattgttttgattcacct 44144055  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||    
T  44144054 tgaacaaagcactattaggattgagtctcttggtcacgggaagaggctgggactttggcagaattaggtttgaagac 44143978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 8378777 - 8378616
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||    
T  8378777 ggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacacta 8378679  T
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8378678 ttaagattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 8378616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 59 - 221
Target Start/End: Complemental strand, 34547143 - 34546982
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  34547143 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacag 34547045  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtt 221  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  34547044 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtaaaattaggtt 34546982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 42006565 - 42006733
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| |||||||||||||||||| |||||||| |||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  42006565 aaaacagggtttagaagccaacaaacaaactatggtttatagaaaatttctcttggcaagaa-cactagggttgggattgttttgattcaccttgaacaa 42006663  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42006664 aacactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 42006733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 44011038 - 44010862
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  44011038 tgtgtagaaaacagggtttagaagccaacatacaaactatggtttatagagaatttttcttggcaacaaacactagggttgggattgttttgatccacct 44010939  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||||||||| | |||| | ||||||||||||||||| ||| ||||||||||| ||||    
T  44010938 tgaacaaagcactattaggattgagtctcttagtcatgagaagaggctgggacttgtgtaaaattaggtttggagac 44010862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 44512805 - 44512637
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactaggg-ttgggattgttttgattcaccttgaaca 157  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||||||||    
T  44512805 aaaacagggtttagaaaccaacatacaaactagggtttatagagaattt-tctttgcaacaa-cactaggggttgggattgttttgattcaccttgaaca 44512708  T
Q  158 aagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44512707 aagcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 44512637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 59 - 227
Target Start/End: Complemental strand, 7464798 - 7464632
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  7464798 aaaacagggtttaaaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggtttggattgttttgattcaccttgaacaa 7464700  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaaga 227  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||    
T  7464699 agcactattaggattgagtctctttgtcacggggagaggctgggacttgggta-aattaggtttgaaga 7464632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 2120807 - 2120969
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgtt-ttgattcaccttgaacaaagcact 164  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| ||||||||||||| ||||| ||||    
T  2120807 ggtttagaagccaacatacaaactagggtttatagagattttctcttggcaacaa-ctctagggttgggattgttgttgattcaccttggacaaaacact 2120905  T
Q  165 attaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2120906 attaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 2120969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 7069699 - 7069850
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7069699 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 7069797  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7069798 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 7069850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 7074706 - 7074857
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7074706 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 7074804  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7074805 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 7074857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 25405312 - 25405463
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25405312 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 25405410  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25405411 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 25405463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 15541258 - 15541107
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15541258 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 15541160  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  15541159 gtctcttggtcacgggaagaggctgggacttgggtataattaggtttgaagac 15541107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 77 - 228
Target Start/End: Complemental strand, 3320312 - 3320162
Alignment:
Q  77 caacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgag 176  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3320312 caacaaacaaactagggtttatagagaatctctattggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattgag 3320214  T
Q  177 tctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3320213 tctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 3320162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 77 - 228
Target Start/End: Complemental strand, 3325060 - 3324910
Alignment:
Q  77 caacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgag 176  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3325060 caacaaacaaactagggtttatagagaatctctattggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattgag 3324962  T
Q  177 tctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3324961 tctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 3324910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 6067488 - 6067312
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgtttt-gattcacc 150  Q
    |||| |||||| | |||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  6067488 tgtgaagaaaacatggtttagaagccaacaaacaaactagggtttatagagaatt-ctcttggtaacaaacactagggttgggattgtttttgattcacc 6067390  T
Q  151 ttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||| || |  ||||||| |||||| |||||||||||||||  || ||||| | |||||||||||||||||||    
T  6067389 ttgaacaaaacattgataggatttagtctcttggtcacgggaagagattgagactttgatagaattaggtttgaagac 6067312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 1099700 - 1099587
Alignment:
Q  73 aagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggat 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||| ||||||||| ||||||||||||    
T  1099700 aagccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttgaaattgttttgattcacgttgaacaaaacactattaggat 1099602  T
Q  173 tgagtctcatggtca 187  Q
    ||| |||| ||||||    
T  1099601 tgactctcttggtca 1099587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 6048890 - 6049048
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    |||||||||||||||||||  |||||||||||| || |||||| ||||||||||||||||||||| ||||||     ||||||||||||||| ||| |||    
T  6048890 agggtttagaagccaacatcaaaactagggtttgtaaagaatt-ctcttggcaacaaacactaggtttggga-----ttgattcaccttgaagaaa-cac 6048982  T
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    |||||||||||| |||| |||||||| |||||   || ||| |||| |||||||||||||||||||    
T  6048983 tattaggattgaatctcttggtcacgagaagatattgagactttggatagaattaggtttgaagac 6049048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 196
Target Start/End: Complemental strand, 12310245 - 12310160
Alignment:
Q  104 atttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagag 196  Q
    |||||||||| ||||||||||||||||||||||||     |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  12310245 atttctcttg-caacaaacactagggttgggattg-----attcaccttgaacaaa-cactattaggattgagtctcttggtcacgggaagag 12310160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 11081527 - 11081684
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    ||||||||||||||||||   |||||||||||| ||||||||| ||||||||||||||||||||||||| ||     ||||||||| |||    || |||    
T  11081527 agggtttagaagccaacaacaaaactagggtttgtagagaatt-ctcttggcaacaaacactagggttgaga-----ttgattcactttg--ggaaacac 11081618  T
Q  164 tattaggattgagtctcatggtcacgggaagaggctggga-cttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||| || ||||||||||||  | |||  ||| ||| ||||||||||||||||    
T  11081619 tattaggattgagtctcttgatcacgggaagagattaggattttgtgtaaaattaggtttgaagac 11081684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 219
Target Start/End: Complemental strand, 24817623 - 24817474
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagca 162  Q
    |||||||||||| |||||    ||||||||||| || ||| ||| ||||| |||||||||||||||||||||      ||||||||||||| |  |||||    
T  24817623 agggtttagaagtcaacaagagaactagggtttgtatagagtttgctctttgcaacaaacactagggttggg------ttgattcaccttgga--aagca 24817532  T
Q  163 ctattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
     ||||||||||||||||| |||||||||||||||  || ||| |||||||||||||||    
T  24817531 gtattaggattgagtctcttggtcacgggaagagattgagactttgggtagaattagg 24817474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 219
Target Start/End: Original strand, 11757266 - 11757399
Alignment:
Q  85 aaactagggtttatagagaattt--ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    |||||||||||| || ||| |||  ||||||| ||||||||||||||||  ||  |||  |||||||||||   ||  |||||||||||||||||||| |    
T  11757266 aaactagggtttgtatagagtttgtctcttgggaacaaacactagggttttgagggtt--gattcaccttgggaaa--cactattaggattgagtctctt 11757361  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||| |||||||||||||||||| |||||||||||||||    
T  11757362 ggttacgggaagaggctgggactttgggtagaattagg 11757399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 219
Target Start/End: Original strand, 20299496 - 20299629
Alignment:
Q  85 aaactagggtttatagagaattt--ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    |||||||||||| || ||| |||  ||||||| ||||||||||||||||  ||  |||  |||||||||||   ||  |||||||||||||||||||| |    
T  20299496 aaactagggtttgtatagagtttgtctcttgggaacaaacactagggttttgagggtt--gattcaccttgggaaa--cactattaggattgagtctctt 20299591  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||| |||||||||||||||||| |||||||||||||||    
T  20299592 ggttacgggaagaggctgggactttgggtagaattagg 20299629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 1047103 - 1047044
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  1047103 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 1047044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 20626148 - 20626207
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  20626148 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 20626207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 20630039 - 20630098
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  20630039 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 20630098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 20642458 - 20642517
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  20642458 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 20642517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 196
Target Start/End: Original strand, 22392501 - 22392606
Alignment:
Q  84 caaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    ||||||||||||| || ||||||| || ||||||||||||||||||||||||      |||||||||||||    || |||||||||||||||||||| |    
T  22392501 caaactagggtttgtatagaatttgctattggcaacaaacactagggttggg------ttgattcaccttg--ggaaacactattaggattgagtctctt 22392592  T
Q  183 ggtcacgggaagag 196  Q
    ||||||||||||||    
T  22392593 ggtcacgggaagag 22392606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 38394096 - 38394155
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  38394096 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 38394155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 48457763 - 48457822
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  48457763 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 48457822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 219
Target Start/End: Complemental strand, 24813747 - 24813619
Alignment:
Q  85 aaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatg 183  Q
    |||||||||||| || ||| ||| |||||||||| ||||||||||||||||      |||||||||||||    ||||||||||||||||||||||| ||    
T  24813747 aaactagggtttgtatagagtttgctcttggcaagaaacactagggttggg------ttgattcaccttggg--aagcactattaggattgagtctcttg 24813656  T
Q  184 gtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    || |||||||| |  |||||| |||||||||||||||    
T  24813655 gtgacgggaagtgattgggactttgggtagaattagg 24813619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 228
Target Start/End: Original strand, 26210565 - 26210719
Alignment:
Q  68 tttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactatt 167  Q
    ||||||| ||||| |  |||||||||||| ||||||| ||||||||||||| ||||||||||||| ||     ||||||||||||| | |||  ||||||    
T  26210565 tttagaatccaacctcaaaactagggtttgtagagaa-ttctcttggcaac-aacactagggttgtga-----ttgattcaccttggagaaa-tactatt 26210656  T
Q  168 aggattgagtctcatggtcacgggaagaggct-gggac-ttgggtagaattaggtttgaagac 228  Q
    ||||||||||||| |||| |||| |||||  | ||||| || |||||||||||||||||||||    
T  26210657 aggattgagtctcttggtaacggaaagagattcgggactttcggtagaattaggtttgaagac 26210719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 219
Target Start/End: Complemental strand, 7470274 - 7470142
Alignment:
Q  85 aaactagggttt--atagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    ||||||||||||  ||||||| | |||||| | |||||||||||||||| |   ||  |||||||||||||   ||  |||||||||||||||||||| |    
T  7470274 aaactagggtttgtatagagattgtctctttggaacaaacactagggtttg---tgggttgattcaccttgtgaaa--cactattaggattgagtctctt 7470180  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||| |||||||||||||| ||| |||||||||||||||    
T  7470179 ggttacgggaagaggctgagactttgggtagaattagg 7470142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 219
Target Start/End: Complemental strand, 7472232 - 7472100
Alignment:
Q  85 aaactagggttt--atagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    ||||||||||||  ||||||| | |||||| | |||||||||||||||| |   ||  |||||||||||||   ||  |||||||||||||||||||| |    
T  7472232 aaactagggtttgtatagagattgtctctttggaacaaacactagggtttg---tgggttgattcaccttgggaaa--cactattaggattgagtctctt 7472138  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||| ||||||||||||||| || |||||||||||||||    
T  7472137 ggttacgggaagaggctggaactttgggtagaattagg 7472100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 217
Target Start/End: Original strand, 7188558 - 7188706
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagca 162  Q
    |||||||||||| |||||   ||| |||||||| || ||  ||| ||||||||||||||||||||||||||| |||     |||||||||| | ||  ||    
T  7188558 agggtttagaagtcaacaataaaaatagggtttgtatagggtttgctcttggcaacaaacactagggttggggttg-----attcaccttggaaaa--ca 7188650  T
Q  163 ctattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaatta 217  Q
    |||||||||||||||||| |||||||||||| ||  || ||| |||||||||||||    
T  7188651 ctattaggattgagtctcttggtcacgggaatagattgagactttgggtagaatta 7188706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 16297222 - 16297137
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaaga 227  Q
    ||||||||||||| | ||  |||||||||||||||||||| |||||||||||||||  || ||| |||||||||||||| ||||||||    
T  16297222 ttgattcaccttggaaaa--cactattaggattgagtctcttggtcacgggaagagattgagactttgggtagaattagatttgaaga 16297137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 31435226 - 31435166
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    |||||||||||||||||||| |||| ||||||||||||||| || ||||||||||||||||    
T  31435226 cactattaggattgagtctcttggttacgggaagaggctggaactttgggtagaattaggt 31435166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 196
Target Start/End: Original strand, 45366550 - 45366671
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    |||||||||| ||||| ||||||||| ||||||||||  ||||| |||||||||||||||||||||| ||||       ||| ||||||||||| ||||     
T  45366550 ggtttagaagtcaaca-acaaactagagtttatagagt-tttcttttggcaacaaacactagggttgtgatt-------ttctccttgaacaaaacactg 45366640  T
Q  166 ttaggattgagtctcatggtcacgggaagag 196  Q
    ||| ||| ||||||| ||||||||| |||||    
T  45366641 ttatgatagagtctcttggtcacggaaagag 45366671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 35739 - 35798
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  35739 cactattatgattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 35798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 1049474 - 1049415
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||| ||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  1049474 cactatcaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 1049415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 1849996 - 1850150
Alignment:
Q  64 agggtttagaa-gccaacatacaaactagggtttatagagaattt--ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaag 160  Q
    ||||||||||| | ||||| | |||||||||||| || ||| |||  ||||||| |||||||||||||||| |   ||  ||||||||||||| | ||      
T  1849996 agggtttagaaaggcaacaaaaaaactagggtttgtatagagtttgtctcttgggaacaaacactagggtttg---tgggttgattcaccttggaaaa-- 1850090  T
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||||| || || | |||||||||||||||||| ||| |||||||||||    
T  1850091 cactattaggattgagtttcttgcttacgggaagaggctgggactttgagtagaattagg 1850150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 3878687 - 3878746
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||    
T  3878687 cactattaggattgagtctcttggttacgggaagaggctgagactttgggtagaattagg 3878746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 27306409 - 27306350
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| ||||||| |||||||    
T  27306409 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtaaaattagg 27306350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 40836921 - 40836862
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||    
T  40836921 cactattaggattgagtctcttggttacgggaagaggctgagactttgggtagaattagg 40836862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 40946438 - 40946497
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| | || |||||||||||||||||| |||||||||||||||    
T  40946438 cactattaggattgagtctcttagttacgggaagaggctgggactttgggtagaattagg 40946497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 44724689 - 44724748
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||| |||||||||||||| |||||||||||||||    
T  44724689 cactattaggattgagtctcttggttacgagaagaggctgggactttgggtagaattagg 44724748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 13290725 - 13290587
Alignment:
Q  83 acaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    |||||||||||||| |||||  |||||||||||||||||||||||| ||||||      |||||||||||  | ||| ||||||||| ||| |||||| |    
T  13290725 acaaactagggtttgtagagt-tttctcttggcaacaaacactaggcttggga-----gtgattcaccttcgagaaa-cactattagaatttagtctctt 13290633  T
Q  183 ggtcacgggaagaggctgggact-tgggtagaattaggtttgaaga 227  Q
    |||||| ||||||   | | ||| ||||||||||||||||||||||    
T  13290632 ggtcacaggaagatattagaactctgggtagaattaggtttgaaga 13290587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 4296113 - 4296054
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||||| |||||||||||||||    
T  4296113 cactattaggattgagtctcttggttacgggaagagattgggactttgggtagaattagg 4296054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 18345651 - 18345710
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||| |||||||||| ||| |||||||||||||||    
T  18345651 cactattaggattgagtctcttggttacgtgaagaggctgagactttgggtagaattagg 18345710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 26804682 - 26804741
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| |||||| |||| |||||||||||||| ||| |||||||||||||||    
T  26804682 cactattaggatttagtctcttggttacgggaagaggctgagactttgggtagaattagg 26804741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 37412306 - 37412247
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| || ||||||| ||||||| |||||||||||||||    
T  37412306 cactattaggattgagtctcttggttacaggaagagactgggactttgggtagaattagg 37412247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 38396745 - 38396804
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||| ||||||| ||||||| |||| |||||||||||||||||| |||||||||||||||    
T  38396745 cactgttaggatcgagtctcttggttacgggaagaggctgggactttgggtagaattagg 38396804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 3035831 - 3035894
Alignment:
Q  161 cactattaggattgagtctcatggtcacgg---gaagaggctgggac-ttgggtagaattaggt 220  Q
    |||||||||||||||||||| |||| ||||   |||||||||||||| ||||||||||||||||    
T  3035831 cactattaggattgagtctcttggttacgggaagaagaggctgggactttgggtagaattaggt 3035894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 24465650 - 24465707
Alignment:
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    ||||||||||||||||| |||||| ||||||||  |||||| ||||||||||||||||    
T  24465650 tattaggattgagtctcttggtcatgggaagagattgggactttgggtagaattaggt 24465707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 219
Target Start/End: Complemental strand, 39146239 - 39146107
Alignment:
Q  85 aaactagggtttatagagaattt--ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    |||||||||||| || ||| |||  |||||||||||||||||||||||| | |     ||||||||||||| | ||  |||||||| ||||||||||| |    
T  39146239 aaactagggtttgtatagagtttgtctcttggcaacaaacactagggtttgaagg---ttgattcaccttggaaaa--cactattatgattgagtctctt 39146145  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||| ||||||||||  ||| || |||||||||||||||    
T  39146144 ggttacgggaagagattggaactttgggtagaattagg 39146107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 11084417 - 11084520
Alignment:
Q  85 aaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatgg 184  Q
    |||||||||||| |||| |||| |||||||||||||||| |||||||| ||     |||||| ||||||    || |||||||||||||||||||| |||    
T  11084417 aaactagggtttgtagaaaatt-ctcttggcaacaaacaatagggttgaga-----ttgatttaccttg--ggaaacactattaggattgagtctcttgg 11084508  T
Q  185 tcacgggaagag 196  Q
    ||||| ||||||    
T  11084509 tcacgagaagag 11084520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 25542640 - 25542696
Alignment:
Q  162 actattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaatta 217  Q
    ||||||||||||||||||| |||| || ||||||| ||||||| |||||||||||||    
T  25542640 actattaggattgagtctcttggttacaggaagagactgggactttgggtagaatta 25542696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 443705 - 443764
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| || | ||||||||||  |||||| |||||||||||||||    
T  443705 cactattaggattgagtctcttgattacgggaagagattgggactttgggtagaattagg 443764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 9679169 - 9679228
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||| ||||||  |||||| |||||||||||||||    
T  9679169 cactattaggattgagtctcttggttacgtgaagagattgggactttgggtagaattagg 9679228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 9680930 - 9680989
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  || ||| |||||||||||||||    
T  9680930 cactattaggattgagtctcttggttacgggaagagattgagactttgggtagaattagg 9680989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 21592325 - 21592262
Alignment:
Q  158 aagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    |||||||||||||||| |||||| |||| ||| ||||||  |||||| ||||||||||||||||    
T  21592325 aagcactattaggatttagtctcttggttacgcgaagagattgggactttgggtagaattaggt 21592262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 25276251 - 25276310
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  || ||| |||||||||||||||    
T  25276251 cactattaggattgagtctcttggttacgggaagagattgagactttgggtagaattagg 25276310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 7092390 - 7092332
Alignment:
Q  162 actattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||||||| |||| ||||||||||  |||| | |||||||||||||||    
T  7092390 actattaggattgagtctcttggttacgggaagagattggggctttgggtagaattagg 7092332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 21680137 - 21680195
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattag 218  Q
    |||||||||||||||||||| |||| || |||||||  |||||| ||||||||||||||    
T  21680137 cactattaggattgagtctcttggttaccggaagagattgggactttgggtagaattag 21680195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 44674 - 44731
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaatta 217  Q
    |||||||| ||||||||||  |||| ||||||||||| |||||| |||||||||||||    
T  44674 cactattatgattgagtcttttggttacgggaagaggttgggactttgggtagaatta 44731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 1099754 - 1099717
Alignment:
Q  120 aacactagggttgggattgttttgattcaccttgaaca 157  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  1099754 aacactagggttgagattgttttgattcacgttgaaca 1099717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 24258555 - 24258605
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaa 193  Q
    ||||||||||||| | ||  |||||||||||||||||||| ||||||||||||    
T  24258555 ttgattcaccttggaaaa--cactattaggattgagtctcttggtcacgggaa 24258605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 20297472 - 20297532
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    |||||||||||||||||||| |||| ||||||||||  |||| | |||||||||| |||||    
T  20297472 cactattaggattgagtctcttggttacgggaagagattggggctttgggtagaaataggt 20297532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 42223250 - 42223303
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagag 196  Q
    ||||||||||||| | ||  |||||||||||||||||||| |||| ||||||||||    
T  42223250 ttgattcaccttggaaaa--cactattaggattgagtctcttggttacgggaagag 42223303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 1e-83; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 17943432 - 17943607
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17943432 tgtgtagaaaatagggtttagaagccaacatacaaactatggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcacct 17943530  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17943531 tgaacaaatcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 17943607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 52 - 225
Target Start/End: Complemental strand, 12781508 - 12781336
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12781508 tgtgtagaaaacagggtttagaaaccaacattcaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcacct 12781410  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaa 225  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12781409 taaacaaagcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaa 12781336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 17932536 - 17932704
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17932536 aaaacagggtttataaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 17932634  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17932635 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 17932704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 27517919 - 27517751
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  27517919 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctctttgcaacaa-cactagggttgggattgttttgattcaccttgaacaa 27517821  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27517820 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 27517751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 22712796 - 22712628
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22712796 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaa 22712698  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22712697 aacactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 22712628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 37171032 - 37170864
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  37171032 aaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-caccagggttgggattgttttgaatcaccttgaacaa 37170934  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  37170933 agcactattaggattgagtctcttggtcatgggaagaggctgggacttgggtagaattaggtttgaagac 37170864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 67 - 228
Target Start/End: Original strand, 30478904 - 30479064
Alignment:
Q  67 gtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactat 166  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30478904 gtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaaagcactat 30479002  T
Q  167 taggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||    
T  30479003 taggattgagtctcttgatcacgggaagagactgggacttgggtagaattaggtttgaagac 30479064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 38190892 - 38191067
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38190892 tgtgtagaaaacagggtttagaagccaacatacaaactagggtttataaataatttctcttggcaacaa-cactagggttgggattgttttgattcacct 38190990  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  38190991 tgaacaaaacactattaagattgagtctcttggtcacgggaagaggctgggacttgagtagaattaagtttgaagac 38191067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 20055045 - 20054877
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||| ||||| ||||||||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  20055045 aaaacagggtatagaaaccaacatacaaactaaggtttatagagaatttctctttgcaacaa-ctctagggttgggattgttttgattcaccttgaacaa 20054947  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20054946 aacactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 20054877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 22717498 - 22717337
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||| |||||    
T  22717498 ggtttagaaaccaacatacaaactagggtttacagagaatttctcttagcaacaacta-tagggttgggattgttttgattcaccttgaacaaaacacta 22717400  T
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22717399 ttaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 22717337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 17462355 - 17462506
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17462355 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 17462453  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17462454 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 17462506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 39686902 - 39687053
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39686902 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 39687000  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39687001 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 39687053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 45567328 - 45567479
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45567328 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 45567426  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  45567427 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 45567479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 2736124 - 2736275
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  2736124 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcacattgaacaaaacactattaggattga 2736222  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  2736223 gtctcttggtcacgggaagaggctgggactttggtagaattaggtttgaagac 2736275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 20050302 - 20050134
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  20050302 aaaacagggtatagaaaccaacatacaaactagggtttatagaaaatttctctttgcaacaa-ctctagggttgggattgttttgattcaccttgaacaa 20050204  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    | |||||||||||||||||||| ||||||||| |||||||| |||||||| || ||||||||||||||||    
T  20050203 aacactattaggattgagtctcttggtcacggaaagaggctaggacttggatataattaggtttgaagac 20050134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 2740860 - 2741011
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  2740860 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcacattgaacaaaacactattaggattga 2740958  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||| |||||    
T  2740959 gtctcttggtcacgggaagaggttgggacttgggtagaattaggtttaaagac 2741011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 76 - 227
Target Start/End: Original strand, 39679964 - 39680114
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39679964 ccaacaaacaaactagggtttatagagaatctcttttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 39680062  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaaga 227  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||||||||||    
T  39680063 gtctcttggtcacgagaagaggctgagacttgggtagaattaggtttgaaga 39680114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 59 - 194
Target Start/End: Complemental strand, 33674685 - 33674551
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33674685 aaaacagggtttagaaaccaacatataaactatggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 33674587  T
Q  159 agcactattaggattgagtctcatggtcacgggaag 194  Q
    |||||||||||||||||||||| |||||||||||||    
T  33674586 agcactattaggattgagtctcttggtcacgggaag 33674551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 35894541 - 35894442
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35894541 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttgggattgttttgattcaccttgaacaa 35894443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 33603904 - 33604065
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    ||||||||| | |||| ||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  33603904 ggtttagaaacaaaca-acaaactagggtttatagaga-tttcttttggcaacaaacattagggttgggattgttttgattcaccttgaacaaaacacta 33604001  T
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    |||  |||||||||  |||||| |||||| |  || ||| || || ||||||||||||||||||    
T  33604002 ttataattgagtcttttggtcatgggaagtgattgagactttaggaagaattaggtttgaagac 33604065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 28459037 - 28458940
Alignment:
Q  132 gggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||   |||||| ||||||||||||||||||||||||    
T  28459037 gggattgttttgattcaccttgaacaaaacactattaggattgagtctcttggtcacggaaagatattgggactttgggtagaattaggtttgaagac 28458940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 20589727 - 20589834
Alignment:
Q  122 cactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    ||||| ||||| |||||||||| ||||||||||||||| |||| ||||||||||||||| |||||||||||||||  || ||| ||||||||||||||||    
T  20589727 cactatggttgtgattgttttggttcaccttgaacaaaacactgttaggattgagtctcttggtcacgggaagagattgagactttgggtagaattaggt 20589826  T
Q  221 ttgaagac 228  Q
    ||| ||||    
T  20589827 ttggagac 20589834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 151
Target Start/End: Complemental strand, 30262045 - 30261962
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    |||||||||||||||| |||||||| |||||||||||  ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  30262045 ggtttagaagccaaca-acaaactacggtttatagagt-tttctcttggcaataaacactagggttgagattgttttgattcacct 30261962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 196
Target Start/End: Original strand, 45158257 - 45158346
Alignment:
Q  107 tctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagag 196  Q
    |||||||| |||||||| |||||||| ||||||||||||||| |||| ||||| |||| |||||||  |||||| |||||||||||||||    
T  45158257 tctcttggaaacaaacattagggttgagattgttttgattcatcttgcacaaaacactgttaggatatagtctcttggtcacgggaagag 45158346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 219
Target Start/End: Complemental strand, 11578378 - 11578229
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt--ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagc 161  Q
    |||||||||||| ||||| | |||||||||||| || |||||||  |||||||||||||||  |||||||||| |||     |||||||| |   ||  |    
T  11578378 agggtttagaagtcaacaaaaaaactagggtttgtatagaatttttctcttggcaacaaac--tagggttggggttg-----attcacctcgggaaa--c 11578288  T
Q  162 actattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||    
T  11578287 actattaggattgagtctcttggtcacgggaagagattgggactttgggtagaattagg 11578229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 40699449 - 40699517
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||| |||||||| ||||||  |||||| ||||||||||||||||||||||||    
T  40699449 cactattaggattgagtctcttggtcacgagaagagattgggactttgggtagaattaggtttgaagac 40699517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 5375524 - 5375465
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  5375524 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 5375465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 27104874 - 27104933
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  27104874 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 27104933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 45280163 - 45280104
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  45280163 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 45280104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 220
Target Start/End: Complemental strand, 23452489 - 23452356
Alignment:
Q  85 aaactagggtttatagagaattt--ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    |||||||||||| || ||| |||  ||||| | |||||||||||||||| |   ||  ||||||||||||||  ||  |||||||||||||||||||| |    
T  23452489 aaactagggtttgtatagagtttgtctctttggaacaaacactagggtttg---tgggttgattcaccttgagaaa--cactattaggattgagtctctt 23452395  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    ||| |||||||||||||||||| |||| |||||||||||    
T  23452394 ggttacgggaagaggctgggactttggatagaattaggt 23452356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 34575391 - 34575221
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg------ttttgattcaccttgaaca 157  Q
    ||||||||||||||||||   ||||| ||| || |||||  ||||||||||||||||||| |||||||| |||||        ||||||||||||| | |    
T  34575391 agggtttagaagccaacactaaaacttgggattgtagagtttttctcttggcaacaaacattagggttgagattgaataatcattgattcaccttggaga 34575292  T
Q  158 aagcactattaggattgagtctcatggtcacggg-aagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    || |||||||||||| ||||||| ||||| |||| ||||  | ||||| ||||||||||||||||||||||||    
T  34575291 aa-cactattaggatggagtctcttggtctcgggaaagattc-gggactttgggtagaattaggtttgaagac 34575221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 195
Target Start/End: Complemental strand, 10942788 - 10942658
Alignment:
Q  69 ttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg--tt----ttgattcaccttgaacaaagca 162  Q
    |||||||||||||   | ||||||| || ||||||||| ||||||||||||||||||||||||| || ||  ||    ||| ||||||||||| ||| ||    
T  10942788 ttagaagccaacaataatactagggattgtagagaatt-ctcttggcaacaaacactagggttgtgaatgaattatcattgtttcaccttgaagaaa-ca 10942691  T
Q  163 ctattaggattgagtctcatggtcacgggaaga 195  Q
    |||||||||||||||||| | ||||||||||||    
T  10942690 ctattaggattgagtctctttgtcacgggaaga 10942658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 195
Target Start/End: Complemental strand, 10948657 - 10948527
Alignment:
Q  69 ttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg--tt----ttgattcaccttgaacaaagca 162  Q
    |||||||||||||   | ||||||| || ||||||||| ||||||||||||||||||||||||| || ||  ||    ||| ||||||||||| ||| ||    
T  10948657 ttagaagccaacaataatactagggattgtagagaatt-ctcttggcaacaaacactagggttgtgaatgaattatcattgtttcaccttgaagaaa-ca 10948560  T
Q  163 ctattaggattgagtctcatggtcacgggaaga 195  Q
    |||||||||||||||||| | ||||||||||||    
T  10948559 ctattaggattgagtctctttgtcacgggaaga 10948527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 30720872 - 30720723
Alignment:
Q  85 aaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg------ttttgattcaccttgaacaaagcactattaggattgagtc 178  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||| |||||      | |||||||| |||| | ||| ||||||||||||||||||    
T  30720872 aaactagggtttgtagagaatt-ctcttggcaccaaacactagggttgagattgaatcactattgattcatcttggagaaa-cactattaggattgagtc 30720775  T
Q  179 tcatggtcacgggaagaggct-gggac-ttgggtagaattaggtttgaagac 228  Q
    || | | |||| ||||||  | | ||| ||||||||||||||||||||||||    
T  30720774 tctttggcacgagaagagattcgtgactttgggtagaattaggtttgaagac 30720723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 195
Target Start/End: Original strand, 43139361 - 43139484
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    |||||||||||||||||| | ||||| |||||| |||||  || ||||||||||||||||||||||||| ||     |||||||| ||||    || ||     
T  43139361 agggtttagaagccaacacaaaaacttgggtttgtagagt-ttgctcttggcaacaaacactagggttgaga-----ttgattcatcttg--ggaaacat 43139452  T
Q  164 tattaggattgagtctcatggtcacgggaaga 195  Q
    ||||||||||||||||| ||||||||||||||    
T  43139453 tattaggattgagtctcttggtcacgggaaga 43139484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 43623756 - 43623700
Alignment:
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  43623756 tattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 43623700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 19502190 - 19502131
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||    
T  19502190 cactattaggattgagtctcttggttacgggaagaggctgagactttgggtagaattagg 19502131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 42452857 - 42452916
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||    
T  42452857 cactattaggattgagtctcttggttacgggaagaggctgagactttgggtagaattagg 42452916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 219
Target Start/End: Complemental strand, 18800538 - 18800434
Alignment:
Q  108 ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-tt 206  Q
    |||||||||||||||||||||||||||      |||||||||||||   ||  |||||||||||||||||||| ||||||| |||||||  |||| | ||    
T  18800538 ctcttggcaacaaacactagggttggg------ttgattcaccttgggaaa--cactattaggattgagtctcttggtcacaggaagagattggggcttt 18800447  T
Q  207 gggtagaattagg 219  Q
    |||||||||||||    
T  18800446 gggtagaattagg 18800434  T

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Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 228
Target Start/End: Original strand, 26345585 - 26345749
Alignment:
Q  69 ttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg------ttttgattcaccttgaacaaagca 162  Q
    |||||||||||||   |||||||| ||| |||||| |||||||||| |||||||| |||||||| |||||        |||||||||||| | |||| ||    
T  26345585 ttagaagccaacaacaaaactaggatttgtagaga-tttctcttggtaacaaacattagggttgagattgaaacaccgttgattcacctt-agcaaa-ca 26345681  T
Q  163 ctattaggattgagtctcatggtcacgggaagaggct-gggac-ttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||| ||||||||| |||||  | | ||| ||||||||||||| ||||||||||    
T  26345682 ctattaggattgagtctcttggtcacggaaagagattcgagactttgggtagaattaagtttgaagac 26345749  T

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Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 27583567 - 27583483
Alignment:
Q  105 tttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagag 196  Q
    |||||||||||||| ||||||| |||||||| ||     |||||||||| | ||  |||||||||||||||||||| |||||||||||||||    
T  27583567 tttctcttggcaacgaacactaaggttgggagtg-----attcaccttggaaaa--cactattaggattgagtctcttggtcacgggaagag 27583483  T

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Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 218
Target Start/End: Original strand, 35107284 - 35107427
Alignment:
Q  67 gtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    ||||||||| |||||   |||||||||||| || ||| ||| ||||||||||||||||   ||||||||||||     |||||||||||  ||  || ||    
T  35107284 gtttagaagtcaacaagaaaactagggtttgtatagagtttgctcttggcaacaaaca---gggttgggattg-----attcaccttgagaaa--catta 35107373  T
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattag 218  Q
    ||||||||||||||| |||||||||||||||  || ||| ||||||||||||||    
T  35107374 ttaggattgagtctcttggtcacgggaagagattgtgactttgggtagaattag 35107427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 39287193 - 39287256
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagg 128  Q
    ||||||||||||||||||   |||||||||||| ||||||| ||||||| |||||||||||||||    
T  39287193 agggtttagaagccaacaagaaaactagggtttgtagagaa-ttctcttagcaacaaacactagg 39287256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 17921754 - 17921836
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggct-gggac-ttgggtagaattaggttt 222  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||| || |||||||  | ||||| ||||||||||||||||||    
T  17921754 ttgattcaccttgaagaaa-cactattaggattgagtctcttggttacaggaagagattcgggactttgggtagaattaggttt 17921836  T

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Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 19504524 - 19504466
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| || ||||||||||||||| |||||||||||||||    
T  19504524 cactattaggattgagtctcttggttac-ggaagaggctgggactttgggtagaattagg 19504466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 21520872 - 21520813
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| || |||||||||| |||| |||||||||||||||    
T  21520872 cactattaggattgagtctcttggttacaggaagaggctaggactttgggtagaattagg 21520813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 42064591 - 42064650
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||| ||| |||| ||||||||||    
T  42064591 cactattaggattgagtctcttggttacgggaagaggctgagactttggatagaattagg 42064650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 7502918 - 7503029
Alignment:
Q  89 tagggtttatagagaatttctcttggcaacaaacactagggttgggattg------ttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||||||        ||||| ||||||| | ||| ||||||||||||||||| || |    
T  7502918 tagggtttgtagagaatt-ctcttgacaacaaacactagggttgggattgaatcaccattgatccaccttggagaaa-cactattaggattgagtatctt 7503015  T
Q  183 ggtcacgggaagag 196  Q
    ||||| ||||||||    
T  7503016 ggtcaagggaagag 7503029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 228
Target Start/End: Complemental strand, 27136351 - 27136237
Alignment:
Q  108 ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-tt 206  Q
    ||||||||||||||||||||||||||| |||     ||||| |||| | ||  ||||||||||||||| |||| ||||||||| ||||   |||||| ||    
T  27136351 ctcttggcaacaaacactagggttggggttg-----attcatcttggaaaa--cactattaggattgaatctcttggtcacggaaagaaattgggacttt 27136259  T
Q  207 gggtagaattaggtttgaagac 228  Q
    | ||||||||||||||| ||||    
T  27136258 gagtagaattaggtttggagac 27136237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 13910220 - 13910164
Alignment:
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||||| |||| |||||||||| |||| || |||||||||||||||    
T  13910220 tattaggattgagtctcttggttacgggaagagactggaactttgggtagaattagg 13910164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 20146879 - 20146804
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattg 138  Q
    |||||||||||| |||||   |||||||||||| || ||| ||| | ||||||||||||||||| |||||||||||    
T  20146879 agggtttagaagtcaacaagaaaactagggtttgtatagagtttgcccttggcaacaaacactatggttgggattg 20146804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 40032237 - 40032178
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| || |||||||| | |||| |||||||||||||||    
T  40032237 cactattaggattgagtctcttggttacaggaagaggttaggactttgggtagaattagg 40032178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 44289296 - 44289190
Alignment:
Q  107 tctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggactt 206  Q
    ||||||||||||||||||||||||| |    |  |||||||||||||   ||  |||||||||||||||||| | |||| ||||||||||  ||||||||    
T  44289296 tctcttggcaacaaacactagggtttga---gggttgattcaccttgggaaa--cactattaggattgagtcacttggttacgggaagagattgggactt 44289202  T
Q  207 -gggtagaatta 217  Q
     |||||||||||    
T  44289201 agggtagaatta 44289190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 15693978 - 15694047
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggct-gggactt-gggtagaattaggtttgaagac 228  Q
    ||||||||||||  |||||| ||||||| |||||||  | ||||||| ||||||||||||||||||||||    
T  15693978 cactattaggataaagtctcttggtcacaggaagagatttgggactttgggtagaattaggtttgaagac 15694047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 33671108 - 33671079
Alignment:
Q  199 tgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||||||||||    
T  33671108 tgggacttgggtagaattaggtttgaagac 33671079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 35215765 - 35215704
Alignment:
Q  161 cactattaggattg-agtctcatggtcacgggaagaggctgggactt-gggtagaattaggt 220  Q
    |||||||||||||| |||||| |||| ||||||||||  |||||||| ||||||||||||||    
T  35215765 cactattaggattggagtctcttggttacgggaagagtttgggactttgggtagaattaggt 35215704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 35218142 - 35218081
Alignment:
Q  161 cactattaggattg-agtctcatggtcacgggaagaggctgggactt-gggtagaattaggt 220  Q
    |||||||||||||| |||||| |||| ||||||||||  |||||||| ||||||||||||||    
T  35218142 cactattaggattggagtctcttggttacgggaagagattgggactttgggtagaattaggt 35218081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 45679764 - 45679793
Alignment:
Q  199 tgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||||||||||    
T  45679764 tgggacttgggtagaattaggtttgaagac 45679793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 42923706 - 42923629
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| | ||  |||||||||||||||||||| |||| | ||||||||  |||| | |||||||||||||||    
T  42923706 ttgattcaccttggaaaa--cactattaggattgagtctcttggttatgggaagagattggggctttgggtagaattagg 42923629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 16227 - 16395
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16227 aaaacagggtttagaagccaacattcaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 16325  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16326 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 16395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 188522 - 188354
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  188522 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 188424  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  188423 aacactattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 188354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 142; Significance: 1e-74; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 22672736 - 22672904
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22672736 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 22672834  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||    
T  22672835 agcactattaggattgagtctcttggtcacgagaagaggctgagacttgggtagaattaggtttgaagac 22672904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 25452404 - 25452565
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||    
T  25452404 ggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-ctctagcgttgggattgttttgattcaccttgaacaaagcacta 25452502  T
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25452503 ttaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 25452565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 31782738 - 31782569
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31782738 aaaacagggtttagaagccaacatacaaactagggtttatagataatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 31782639  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    | |||| ||||||||||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||    
T  31782638 aacactgttaggattgagtctcttggtcacgggaagagattgggaattgggtagaattaggtttgaagac 31782569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 11962720 - 11962545
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||     
T  11962720 tgtgtagaaaacagggtttagaagccaacatacaaactatggttcatagagaatttctcttggcaacaa-cactagggttgagattgttttgattcacca 11962622  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  11962621 tgaacaaagcactattaggattgtgtctcttggtcacgggaagaggctgagacttgggtagaattaggtttgaagac 11962545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 55 - 228
Target Start/End: Complemental strand, 17841534 - 17841361
Alignment:
Q  55 gtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttga 154  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||||||||||    
T  17841534 gtagaaaacagggtttagaaaccatcatacaaactagggtttatagagaatttctcttggcaaacaatactagggttgagattgttttgattcaccttga 17841435  T
Q  155 acaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  17841434 acaaagcactattaggattgagtctctaggtcacgggaagaggctggaacttgggtagaattaggtttgaagac 17841361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 2298274 - 2298113
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||    
T  2298274 ggtttagaaaccaacatacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacacta 2298176  T
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  2298175 ttaggattgagtctcttggtcacgggaagaggctgagacttgggtagaattaggtttgaagac 2298113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 67 - 228
Target Start/End: Complemental strand, 35385724 - 35385564
Alignment:
Q  67 gtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactat 166  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||    
T  35385724 gtttagaaactaacatacaaactagggtttatagagaatttctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactat 35385626  T
Q  167 taggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  35385625 taggattgagtctcttggtcacgggaagaggctgggactttggtagaattaggtttgaagac 35385564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 16093578 - 16093403
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  16093578 tgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagataatttctcttggcaacaaacactagggttgggatctttttgattcacct 16093479  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||| ||| |||||||||||||||||||| |||||||||||| || ||||||||| ||||||||||| |||||||||    
T  16093478 tgaa-aaaacactattaggattgagtctcttggtcacgggaaaagtctgggacttaggtagaattagatttgaagac 16093403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 40222672 - 40222833
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| | ||    
T  40222672 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgagattgttttgattcaccttgaacaaagtatta 40222770  T
Q  166 ttaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||||    
T  40222771 ttaggattgagtctcttgatcacgggaagaggctggaacttgggtagaattatgtttgaagac 40222833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 1240330 - 1240498
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| |||||||||||||||||||||||||||||||||||||| | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  1240330 aaaacagggtttagaagccaacatacaaactagggtttatagatattttctctttgcaacaa-cactagggttgggattgttttgattcaccttgaacaa 1240428  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    | |||||||||||||||||||| | | |||||||||||||||||| ||||||||||||||||||||||||    
T  1240429 aacactattaggattgagtctcttaggcacgggaagaggctgggatttgggtagaattaggtttgaagac 1240498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 10627257 - 10627434
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg-ttttgattcacc 150  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  10627257 tgtgtagaaaacagggtttagaagccaacatacaaactagtgtttatagagaatttctcttagcaacaaacactagggttaggattgtttttgattcacc 10627356  T
Q  151 ttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||||  || |||| ||||||||||||||||||||||    
T  10627357 ttgaacaaaacactgttaggattgagtctcttggtcacgggaagagattgagactagggtagaattaggtttgaagac 10627434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 25445401 - 25445566
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcacta 165  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||    
T  25445401 ggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacacta 25445499  T
Q  166 t----taggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25445500 tctattaggattgagtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 25445566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 1170730 - 1170881
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1170730 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 1170828  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1170829 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 1170881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 26406760 - 26406585
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  26406760 tgtgtagaaaacagggtttagaaaccaacaaacaaactagggtttatagagaatt-ctcttggcaacaaacactagggttgagattgttttgattcacct 26406662  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||| || | ||||||||||||||| ||||||| |||||||  || |||||| ||||||||||||||||||||    
T  26406661 tgaacaaaacattgttaggattgagtctcttggtcacaggaagagattgagacttgagtagaattaggtttgaagac 26406585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 59 - 227
Target Start/End: Original strand, 28786308 - 28786473
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||| |||||||| |||||||||||| |||||| ||| |||| |||||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  28786308 aaaacaggatttagaaggcaacatacaaacaagggtt-ataaagaacttctcttg-caacaa-cactagggttggaattgttttgattcaccttgaacaa 28786404  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaaga 227  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  28786405 agcactattaggattgagtctcttggtcacgggaagaggctgggacttgggcagaattaggtttgaaga 28786473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 52 - 191
Target Start/End: Original strand, 25838002 - 25838140
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||| | |||||||||||||||| | |||||| ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||    
T  25838002 tgtgtagaaaacaaggtttagaagccaacaaagaaactatggtttatagagaatt-ctcttggtaacaaacactagggttgagattgttttgattcacct 25838100  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacggg 191  Q
    |||||||| |||||||||||  ||||||| ||||||||||    
T  25838101 tgaacaaaacactattaggagagagtctcttggtcacggg 25838140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 42238205 - 42238298
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttg 153  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  42238205 aaaacagggtttagaagccaacatacaaactagggtttatagagaatttctctttgcaac-aacactagggttgggattgttttgattcaccttg 42238298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 25562577 - 25562403
Alignment:
Q  52 tgtgtagaaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacct 151  Q
    ||||||||||||| |||| |||| |||||||||||| |||| |||||||| ||||||| |||| |||||| | |||| ||| ||||||||||||||||||    
T  25562577 tgtgtagaaaataaggtt-agaaaccaacatacaaattaggatttataga-aatttcttttgggaacaaatattaggattgagattgttttgattcacct 25562480  T
Q  152 tgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||| |||| |||||||| ||| ||  ||||||| ||||||  ||  ||||||||| ||||||||||||||||    
T  25562479 tgaacaaaacactcttaggatttagtttctgggtcacgagaagagattgtaacttgggtaaaattaggtttgaagac 25562403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 4897731 - 4897896
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagaga-atttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagca 162  Q
    ||||||||||| | |||| ||||||||||||||| ||||| ||||||||  ||   | ||| |||||||| ||||||||| |||||||||||||||| ||    
T  4897731 agggtttagaaacaaaca-acaaactagggtttagagagagatttctctaagcgggagacagtagggttgagattgttttcattcaccttgaacaaatca 4897829  T
Q  163 ctattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaagac 228  Q
    || |||||||||||| || |||||||||||||||  || ||| ||||||||||||||| ||||||||    
T  4897830 ctgttaggattgagtatcttggtcacgggaagagattgtgactttgggtagaattaggcttgaagac 4897896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 4754164 - 4754319
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    |||||||| ||||||||| | | |||||||||| |||||  || ||||||||||||||||||||||||| ||     ||||||||||||||  ||| |||    
T  4754164 agggtttaaaagccaacacaaacactagggtttgtagagt-ttgctcttggcaacaaacactagggttgaga-----ttgattcaccttga--aaaacac 4754255  T
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggtttgaag 226  Q
    |||||| |||||| ||| ||||||| |||||||  || ||| |||| |||||||||||||||||    
T  4754256 tattagaattgagcctcttggtcactggaagagattgtgactttggatagaattaggtttgaag 4754319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 2144835 - 2144675
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-acactagggttgggattgttttgattcaccttgaacaaagca 162  Q
    ||||||||||||||||||   |||||||||||| |||||  || ||||||||||||| ||||||||||||||||||     |||||||||| | ||| ||    
T  2144835 agggtttagaagccaacactaaaactagggtttgtagagt-ttgctcttggcaacaacacactagggttgggattg-----attcaccttggagaaa-ca 2144743  T
Q  163 ctattaggattgagtctcatggtcacgggaagaggct-gggac-ttgggtagaattaggtttgaagac 228  Q
    |||||||||| ||||||| ||||| |||||||||  |  |||| |||||| |||||||||||||||||    
T  2144742 ctattaggatggagtctcttggtcgcgggaagagattcaggactttgggtggaattaggtttgaagac 2144675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 219
Target Start/End: Original strand, 4236656 - 4236788
Alignment:
Q  85 aaactagggtttatagagaattt--ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    |||||||||||| || ||| |||  ||||| | |||||||||||||||| |   ||  ||||||||||||| | ||  |||||||||||||||||||| |    
T  4236656 aaactagggtttgtatagagtttgtctctttggaacaaacactagggtttg---tgggttgattcaccttggaaaa--cactattaggattgagtctctt 4236750  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||| |||||||||||||||||| |||||||||||||||    
T  4236751 ggttacgggaagaggctgggactttgggtagaattagg 4236788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 193
Target Start/End: Original strand, 29748357 - 29748479
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcac 163  Q
    ||||||||||||||||||   |||||||||||| ||||||| |||||||||||||||||| ||||||| |||     |||||||  |||| | ||| |||    
T  29748357 agggtttagaagccaacaagaaaactagggtttgtagagaa-ttctcttggcaacaaacagtagggttagga-----ttgattcgtcttggagaaa-cac 29748449  T
Q  164 tattaggattgagtctcatggtcacgggaa 193  Q
    || |||||||||||||| ||||||||||||    
T  29748450 taataggattgagtctcttggtcacgggaa 29748479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 4410123 - 4410182
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  4410123 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 4410182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 16776258 - 16776317
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  16776258 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 16776317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 17413393 - 17413282
Alignment:
Q  108 ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-tt 206  Q
    |||||||||||||||||||||||||||||||     ||||||||||   ||  |||||||||||||||||||| |||||| ||||||||  || ||| ||    
T  17413393 ctcttggcaacaaacactagggttgggattg-----attcaccttgggaaa--cactattaggattgagtctcttggtcaagggaagagattgagacttt 17413301  T
Q  207 gggtagaattaggtttgaa 225  Q
     ||||||||||||||||||    
T  17413300 aggtagaattaggtttgaa 17413282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 25921652 - 25921593
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggact-tgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||    
T  25921652 cactattaggattgagtctcttggttacgggaagaggctgggactctgggtagaattagg 25921593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 38882206 - 38882265
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  38882206 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 38882265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 658550 - 658473
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||  ||  |||||||||||| ||||||| |||| |||||||||||||||||| |||||||||||||||    
T  658550 ttgattcaccttgagaaa--cactattaggatcgagtctcttggttacgggaagaggctgggactttgggtagaattagg 658473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 2175019 - 2175078
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  2175019 cactattatgattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 2175078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 6745168 - 6745227
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||||||    
T  6745168 cactattaggattgagtctcttggttacgggaagaggttgggactttgggtagaattagg 6745227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 6747405 - 6747464
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||| ||||||| |||||||||||||||    
T  6747405 cactattaggattgagtctcttggttacgggaagagactgggactttgggtagaattagg 6747464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 15143562 - 15143633
Alignment:
Q  158 aagcactattaggattgagtctcatggtcacgggaagaggctggga-cttgggtagaattaggtttgaagac 228  Q
    ||||||| ||||||||||||||| |||||||||||||||  | |||  ||||||||||||||||||||||||    
T  15143562 aagcactgttaggattgagtctcttggtcacgggaagagatttggattttgggtagaattaggtttgaagac 15143633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 15225042 - 15224880
Alignment:
Q  64 agggtttagaagccaacatacaaactagggt---ttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaag 160  Q
    |||||||||||||||||||  ||||||||||   || ||||||| | ||||||||||||||||||||||||  ||     ||||||||||||||| |||     
T  15225042 agggtttagaagccaacatcaaaactagggtggcttgtagagaact-ctcttggcaacaaacactagggttatga-----ttgattcaccttgaagaaa- 15224950  T
Q  161 cactattaggattgagtctcatggtcacgggaagaggct-gggac-ttgggtagaattaggtttgaagac 228  Q
    ||||||||||||  |||||  |||||| ||||||||  | | ||| ||||||| ||||||||||||||||    
T  15224949 cactattaggataaagtcttttggtcatgggaagagattcgagactttgggtaaaattaggtttgaagac 15224880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 18466784 - 18466843
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||| ||||||||||||| |||||||||||||||    
T  18466784 cactattaggattgagtctcttggttacggaaagaggctgggactttgggtagaattagg 18466843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 18469111 - 18469170
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| || ||||||||||||    
T  18469111 cactattaggattgagtctcttggttacgggaagaggctgggactttaggtagaattagg 18469170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 39854583 - 39854642
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||||||||||||| |||||||||| |||| || |||||||||||||||    
T  39854583 cactattaggattgagtctcatggttacgggaagagactggaactttgggtagaattagg 39854642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 13294711 - 13294811
Alignment:
Q  85 aaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg------ttttgattcaccttgaacaaagcactattaggattgagtc 178  Q
    ||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||        |||||| |||||||||||| ||||||||||||||| ||    
T  13294711 aaactagagtttgtagagaatt-ctcttggcaacaagcactagggttgggattgaatcaccattgatttaccttgaacaaaacactattaggattgattc 13294809  T
Q  179 tc 180  Q
    ||    
T  13294810 tc 13294811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 34033798 - 34033714
Alignment:
Q  106 ttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagag 196  Q
    |||||||||||||||||||||| |||||||||| |||     |||||| | ||| |||||||||||||||||||| ||||| |||||||||    
T  34033798 ttctcttggcaacaaacactagcgttgggattgattt-----accttggagaaa-cactattaggattgagtctcttggtcgcgggaagag 34033714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 2818533 - 2818455
Alignment:
Q  140 tttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||| | ||  |||||||| ||||||||||| |||| ||||||| |||||||||| |||||||||||||||    
T  2818533 tttgattcaccttggaaaa--cactattacgattgagtctcttggttacgggaaaaggctgggactttgggtagaattagg 2818455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 35430177 - 35430347
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg------ttttgattcaccttgaaca 157  Q
    |||||||||||| ||||||  |||||||||||| || ||  ||||||||||||| ||||||||||||| ||||||        ||||||||||||| | |    
T  35430177 agggtttagaagtcaacatcaaaactagggtttgtacagt-tttctcttggcaataaacactagggtttggattgaatcaccattgattcaccttggaga 35430275  T
Q  158 aagcactattaggattgagtctcatggtcacgggaagaggct-gggac-ttgggtagaattaggtttgaagac 228  Q
    || ||||||||  |||||||||| |||||  ||||||||  | ||| | ||||||||||||||||||||||||    
T  35430276 aa-cactattacaattgagtctcttggtctagggaagagattcgggtctttgggtagaattaggtttgaagac 35430347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 15445493 - 15445431
Alignment:
Q  121 acactagggttgggattgttttgat---tcaccttgaacaaagcactattaggattgagtctc 180  Q
    |||||||||||| ||||||||||||   |||||||||||||| |||| |||||||||||||||    
T  15445493 acactagggttgagattgttttgatatttcaccttgaacaaaacactgttaggattgagtctc 15445431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 21948126 - 21948185
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| | |||||||||||||||| |||||| ||||||||    
T  21948126 cactattaggattgagtctcttggttatgggaagaggctgggactttgggtggaattagg 21948185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 27910550 - 27910609
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||| |||| |||| |||||||||||||| ||| |||||||||||||||    
T  27910550 cactattaggattgaatctcttggttacgggaagaggctgtgactttgggtagaattagg 27910609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 27912636 - 27912695
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||| |||||||||| ||| |||||||||||||||    
T  27912636 cactattaggattgagtctcttggttacgtgaagaggctgagactttgggtagaattagg 27912695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 31472792 - 31472733
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||||||||||||||  |||||| || ||||||||||||    
T  31472792 cactattaggattgagtctcttggtcacgggaagagattgggacttttggtagaattagg 31472733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 13295768 - 13295907
Alignment:
Q  85 aaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatgg 184  Q
    |||||||||||| || |||||| || ||||||||||||||||| |||||||     || | ||||| |||||||| |||| ||||||||||||||| ||     
T  13295768 aaactagggtttgtatagaatt-cttttggcaacaaacactagagttggga-----ttcaatcaccatgaacaaaacacttttaggattgagtctcttga 13295861  T
Q  185 tcacgggaagaggct-gggac-ttgggtagaattaggtttgaagac 228  Q
    ||||  ||||||  | | ||| ||||||||||||| ||||||||||    
T  13295862 tcacatgaagagattcgagactttgggtagaattaagtttgaagac 13295907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 18509497 - 18509440
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaatta 217  Q
    |||||||||||||||||||| |||| ||||||||||  |||||| |||||||||||||    
T  18509497 cactattaggattgagtctcttggttacgggaagagaatgggactttgggtagaatta 18509440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 20053852 - 20053921
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttg 132  Q
    |||||||||||| ||||| | ||||||| ||||||| | | ||| |||||||||||||||||||||||||    
T  20053852 agggtttagaaggcaacacaaaaactagagtttatataaagtttgctcttggcaacaaacactagggttg 20053921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 228
Target Start/End: Original strand, 42238298 - 42238330
Alignment:
Q  196 ggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||||||||||||||    
T  42238298 ggctgggacttgggtagaattaggtttgaagac 42238330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 695977 - 696036
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  || ||| |||||||||||||||    
T  695977 cactattaggattgagtctcttggttacgggaagagattgagactttgggtagaattagg 696036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 10529278 - 10529219
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||| | |||||||||||||||    
T  10529278 cactattaggattgagtctcttggttacgggaagagattggggctttgggtagaattagg 10529219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 16092379 - 16092320
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  || ||| |||||||||||||||    
T  16092379 cactattaggattgagtctcttggttacgggaagagattgagactttgggtagaattagg 16092320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 18511391 - 18511332
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||||| |||| ||||||||||    
T  18511391 cactattaggattgagtctcttggttacgggaagagattgggactttggatagaattagg 18511332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 20506020 - 20505961
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  || ||| |||||||||||||||    
T  20506020 cactattaggattgagtctcttggttacgggaagagattgagactttgggtagaattagg 20505961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 21684630 - 21684571
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||| |||| | ||| |||||||||||    
T  21684630 cactattaggattgagtctcttggttacgggaagaggttggggctttgagtagaattagg 21684571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 24126956 - 24127015
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| |||||| |||| ||||||||||  |||||| |||||||||||||||    
T  24126956 cactattaggattaagtctcttggttacgggaagagattgggactttgggtagaattagg 24127015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 26097832 - 26097891
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||| |||||||| |||| ||||||| | |||||||| |||||||||||||||    
T  26097832 cactattaggaatgagtctcttggttacgggaaaatgctgggactttgggtagaattagg 26097891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Complemental strand, 6661365 - 6661331
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaaga 195  Q
    |||||||||||||||||||| ||||||||||||||    
T  6661365 cactattaggattgagtctcttggtcacgggaaga 6661331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 5777869 - 5777800
Alignment:
Q  69 ttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattg 138  Q
    |||||||||||||   ||||||| |||| |||||  ||||||||| ||||||| | ||||||||||||||    
T  5777869 ttagaagccaacaacaaaactagagtttgtagagtttttctcttgacaacaaatagtagggttgggattg 5777800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 34477233 - 34477164
Alignment:
Q  161 cactattaggattg-agtctcatggtcacgggaagaggctgggactt-gggtagaattaggtttgaagac 228  Q
    |||||||| ||||| |||||| |||| ||||||||||  |||||||| ||||||||||||||||| ||||    
T  34477233 cactattatgattggagtctcttggttacgggaagagattgggactttgggtagaattaggtttggagac 34477164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 35314727 - 35314775
Alignment:
Q  83 acaaactagggtttatagagaatttctcttggcaacaaacactagggttg 132  Q
    ||||||||| |||||||| |  ||||||||||||||||||||||||||||    
T  35314727 acaaactagagtttatagggg-tttctcttggcaacaaacactagggttg 35314775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 42770867 - 42770924
Alignment:
Q  162 actattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattag 218  Q
    |||||||||| |||||||| |||||||||||||||  || ||| ||||||||||||||    
T  42770867 actattaggactgagtctcttggtcacgggaagagattgagactttgggtagaattag 42770924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 18596727 - 18596804
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| | ||  |||| ||||||||||||||| |||| ||||||||||  |||||| ||| |||||||||||    
T  18596727 ttgattcaccttggaaaa--cactgttaggattgagtctcttggttacgggaagagattgggactttgagtagaattagg 18596804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 31466154 - 31466098
Alignment:
Q  164 tattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||||||| |||| ||||||||||  | |||| |||||||||||||||    
T  31466154 tattaggattgagtctcttggttacgggaagagatttggactttgggtagaattagg 31466098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 40221604 - 40221681
Alignment:
Q  141 ttgattcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| | ||  |||||||||||||||||||| |||| || |||||||  |||||| || ||||||||||||    
T  40221604 ttgattcaccttggaaaa--cactattaggattgagtctcttggttacaggaagagattgggacttttggtagaattagg 40221681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 17266 - 17098
Alignment:
Q  59 aaaatagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 158  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||    
T  17266 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgtttcatcttgaacaa 17168  T
Q  159 agcactattaggattgagtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    |||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  17167 agcactattaggattgagtctcttggtcacgggaagaagctaggacttgggtagaattaggtttgaagac 17098  T

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Target: scaffold0006 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 224738 - 224889
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  224738 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 224836  T
Q  176 gtctcatggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  224837 gtctcttggtcacgggaagaggctgggacttgggtagaattaggtttgaagac 224889  T

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Target: scaffold0131 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 31060 - 31170
Alignment:
Q  76 ccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 175  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31060 ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaaaacactattaggattga 31158  T
Q  176 gtctcatggtca 187  Q
    ||||| ||||||    
T  31159 gtctcttggtca 31170  T

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Target: scaffold0131; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 14561 - 14502
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| |||||| |||| |||||||||||||| ||| |||||||||||||||    
T  14561 cactattaggatttagtctcttggttacgggaagaggctgagactttgggtagaattagg 14502  T

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Target: scaffold0370 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 1631 - 1572
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  1631 cactattaggattgagtctcttggttacgggaagaggctgggactttgggtagaattagg 1572  T

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Target: scaffold1764 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 1345 - 1391
Alignment:
Q  66 ggtttagaagccaacatacaaactagggtttatagagaatttctctt 112  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  1345 ggtttagaaaccaacatacaaactagggtttatagagaatttctctt 1391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 219
Target Start/End: Complemental strand, 16092 - 15942
Alignment:
Q  64 agggtttagaagccaacatacaaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagca 162  Q
    |||||||||||| |||||   |||||||||||| || ||| ||| ||| | ||||||||||||||||||| | |||     ||||||||||   |||  |    
T  16092 agggtttagaagtcaacaagaaaactagggtttgtatagagtttgctcctagcaacaaacactagggttgaggttg-----attcaccttgcgaaaa--a 16000  T
Q  163 ctattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||    
T  15999 ctattaggattgagtctcttggtcacgggaagagattgggactttgggtagaattagg 15942  T

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Target: scaffold0057 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 219
Target Start/End: Complemental strand, 16900 - 16771
Alignment:
Q  85 aaactagggtttatagagaattt-ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcatg 183  Q
    |||||||||||| || ||| ||| ||||||||||||||||||||||||||||     ||||||||||||  |  || |||||||||||||||||| | ||    
T  16900 aaactagggtttgtatagagtttgctcttggcaacaaacactagggttggga-----ttgattcacctt--aggaaacactattaggattgagtcacttg 16808  T
Q  184 gtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    || ||||||||||  || ||| |||||||||||||||    
T  16807 gtgacgggaagagattgagactttgggtagaattagg 16771  T

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Target: scaffold0511 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 2150 - 2209
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||| |||||||||| |||||||||||||||    
T  2150 cactattaggattgagtctcttggttacgggaaaaggctgggactttgggtagaattagg 2209  T

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Target: scaffold0339 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 4105 - 4164
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||| |||||||| |||||||||||||||    
T  4105 cactattaggattgagtctcttggttacgggaagaagctgggactttgggtagaattagg 4164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 69470 - 69411
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||||||    
T  69470 cactattaggattgagtctcttggttacgggaagaggttgggactttgggtagaattagg 69411  T

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Target: scaffold0011 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 35748 - 35807
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  35748 cactattaggattaagtctcttggttacgggaagaggctgggactttgggtagaattagg 35807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 41662 - 41604
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattag 218  Q
    |||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||    
T  41662 cactattaggattgagtctcttggttacgggaagaggctgggactttcggtagaattag 41604  T

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Target: scaffold0250 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 219
Target Start/End: Original strand, 2916 - 3048
Alignment:
Q  85 aaactagggtttatagagaattt--ctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcat 182  Q
    |||||||||||| || ||| |||  ||||| | |||||||||||||||| |   ||  ||||||||||||| | ||  |||||||||||||||||||| |    
T  2916 aaactagggtttgtatagagtttgtctcttcggaacaaacactagggtttg---tgggttgattcaccttggaaaa--cactattaggattgagtctctt 3010  T
Q  183 ggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||| | ||||||||||| |||| |||||||||||||||    
T  3011 ggttatgggaagaggcttggactttgggtagaattagg 3048  T

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Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 11652 - 11593
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||  |||||| |||||||||||||||    
T  11652 cactattaggattgagtctcttggttacgggaagagattgggactttgggtagaattagg 11593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 79294 - 79353
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctg-ggacttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| |||||||||||||| | | |||||||||||||||    
T  79294 cactattaggattgagtctcttggttacgggaagaggctgagaatttgggtagaattagg 79353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 1818 - 1763
Alignment:
Q  165 attaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    ||||||||||||| || |||||||||||||||  |||||| |||||||||||||||    
T  1818 attaggattgagtttcttggtcacgggaagagattgggactttgggtagaattagg 1763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 29280 - 29339
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattagg 219  Q
    |||||||||||||||||||| |||| ||||||||||| |||| | ||| |||||||||||    
T  29280 cactattaggattgagtctcttggttacgggaagaggttggggctttgagtagaattagg 29339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 57626 - 57542
Alignment:
Q  144 attcaccttgaacaaagcactattaggattgagtctcatggtcacgggaagaggct-gggac-ttgggtagaattaggtttgaaga 227  Q
    |||||||||||| ||| ||||||||||||||| |||| ||||||  |||||||  | ||||| |||||| ||||||||||||||||    
T  57626 attcaccttgaaaaaa-cactattaggattgaatctcttggtcattggaagagattcgggactttgggtggaattaggtttgaaga 57542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 52120 - 52180
Alignment:
Q  161 cactattaggattgagtctcatggtcacgggaagaggctgggac-ttgggtagaattaggt 220  Q
    |||||||||||||||||||| |||| ||||||||||  || ||| |||| |||||||||||    
T  52120 cactattaggattgagtctcttggttacgggaagagattgtgactttggatagaattaggt 52180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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