View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11272_high_4 (Length: 272)
Name: NF11272_high_4
Description: NF11272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11272_high_4 |
 | |
|
| [»] scaffold0182 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-135; HSPs: 20)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 12 - 258
Target Start/End: Complemental strand, 21773397 - 21773151
Alignment:
| Q |
12 |
atgaacgctgcaaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtcca |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21773397 |
atgaacgctgcaaaagaacaaatcccgtagtcgttatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtcca |
21773298 |
T |
|
| Q |
112 |
caacaatctcaggaagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctac |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21773297 |
caacaatctcaggaagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctac |
21773198 |
T |
|
| Q |
212 |
atctcttagatcttgtatgttccggtatgtcatcatcttgacctttt |
258 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21773197 |
atctcttagatcttgtatgttccggtatgtcatcatcttgacctttt |
21773151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 12 - 258
Target Start/End: Complemental strand, 21786925 - 21786679
Alignment:
| Q |
12 |
atgaacgctgcaaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtcca |
111 |
Q |
| |
|
||||| |||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| |||| |||||| | |||||||| |
|
|
| T |
21786925 |
atgaaagctgcaaaagaacaaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttgaggaaagtagcggctgaagtgtcgtcca |
21786826 |
T |
|
| Q |
112 |
caacaatctcaggaagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctac |
211 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
21786825 |
caacgatctcaggaagagtcagttctgcagcgaacaatccttcggagaaatctatgtctcttggccttcgtgtcttgcttgacttaagtcttattcctac |
21786726 |
T |
|
| Q |
212 |
atctcttagatcttgtatgttccggtatgtcatcatcttgacctttt |
258 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21786725 |
agctcttagatcttgtatgttccggtatgtcatcatcttgacctttt |
21786679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 21717253 - 21717016
Alignment:
| Q |
18 |
gctgcaaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtccacaacaa |
117 |
Q |
| |
|
|||||||||||||||| ||| ||||| || | |||||||||||||||||||||||| |||||||||||||| |||| |||||| | |||||||||||| | |
|
|
| T |
21717253 |
gctgcaaaagaacaaaacccatagtcgttgttaaaatctggacacatctcatatgcaatcaggttgaggaaagtagcggctgaagtgtcgtccacaacga |
21717154 |
T |
|
| Q |
118 |
tctcaggaagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctacatctct |
217 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| || | |
|
|
| T |
21717153 |
tctcaggaagagtcagttcagcagtgaaccatccttcggagaaatctatgtctcttggccttcgtgtcttgcttgacttaagtcttattcctaatgcttt |
21717054 |
T |
|
| Q |
218 |
tagatcttgtatgttccggtatgtcatcatcttgacctttt |
258 |
Q |
| |
|
|||||||| ||||||| |||| |||||||||||||||| |
|
|
| T |
21717053 |
tagatcttttatgttcgtgtat---atcatcttgacctttt |
21717016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 21683176 - 21682965
Alignment:
| Q |
22 |
caaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtccacaacaatctc |
121 |
Q |
| |
|
||||||||||||| |||||||| || | ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |
|
|
| T |
21683176 |
caaaagaacaaattccgtagtcgttgtcaaaatttggacacatctcatatgctatcaggttgaggaaagtagtggctgatgtgtcgtccacaacgatctc |
21683077 |
T |
|
| Q |
122 |
aggaagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctacatctcttaga |
221 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||| | ||||||||||||| ||||||||| |||||||||||||||| ||||||||| || ||||| |
|
|
| T |
21683076 |
aggaagagttagttctgcagtgaaccatccttcggtgaaatctatgtcttttggccttcgtgtcttgcttgacttaagtcttattcctagtgcttttaga |
21682977 |
T |
|
| Q |
222 |
tcttgtatgttc |
233 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
21682976 |
tcttttatgttc |
21682965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 234
Target Start/End: Complemental strand, 21666830 - 21666607
Alignment:
| Q |
11 |
gatgaacgctgcaaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtcc |
110 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||| |
|
|
| T |
21666830 |
gatgaaagctgcaaaagaacaaatcccgtagtcattcttaaaatctggacacatctcatatgctatcttattgaggaaaatagtggctgatgtgtcgtcc |
21666731 |
T |
|
| Q |
111 |
acaacaatctcaggaagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattccta |
210 |
Q |
| |
|
||||| ||||||||||||||||||| |||| |||| ||||| | |||||||||| |||||| ||| || |||||||||||||||| ||||||||| |
|
|
| T |
21666730 |
acaacgatctcaggaagagtcagtttcgcagcgaaccatcctgcggagaaatctaagtctctcagccatcgtgtcttgcttgacttaactcttattccta |
21666631 |
T |
|
| Q |
211 |
catctcttagatcttgtatgttcc |
234 |
Q |
| |
|
| || |||||||||||||||||| |
|
|
| T |
21666630 |
ctgcttttagatcttgtatgttcc |
21666607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 21789683 - 21789442
Alignment:
| Q |
12 |
atgaacgctgcaaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtcca |
111 |
Q |
| |
|
||||| |||||||| |||||||| |||||||| || | ||||||||||||||||||||||||||||||||||||||| || | |||||| | |||||||| |
|
|
| T |
21789683 |
atgaaagctgcaaacgaacaaattccgtagtcgttctcaaaatctggacacatctcatatgctatcaggttgaggaaagttgcggctgaagtgtcgtcca |
21789584 |
T |
|
| Q |
112 |
caacaatctcaggaagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctac |
211 |
Q |
| |
|
|||| ||||||||||||||||||| |||| |||| ||||| |||||||||||| |||| ||||||| | ||| |||||||||| ||||||| || |
|
|
| T |
21789583 |
caacgatctcaggaagagtcagtttcgcagcgaaccatcctgcagagaaatctacgtctgttggcctccgtgtcgcacttgacttaagtcttattccgac |
21789484 |
T |
|
| Q |
212 |
atctcttagatcttgtatgttccggtatgtcatcatcttgac |
253 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
21789483 |
tgctcttagatcttgtatgctcctgtatgtcatcatcttgac |
21789442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 21727949 - 21727738
Alignment:
| Q |
22 |
caaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtccacaacaatctc |
121 |
Q |
| |
|
||||||||||||| ||||| || || | ||||||||||||||||||||||||||||||||||||||| |||| ||||||| || ||||||||| ||||| |
|
|
| T |
21727949 |
caaaagaacaaattccgtaatcgttgtcaaaatctggacacatctcatatgctatcaggttgaggaaagtagcggctgatatgttgtccacaacgatctc |
21727850 |
T |
|
| Q |
122 |
aggaagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctacatctcttaga |
221 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||||| |
|
|
| T |
21727849 |
gggaagagttagttctgcagtgaaccatccttcggagaaatctatgtctcttggccttcgtctcttgcttgacttaagtcttattcctaatgcttttaga |
21727750 |
T |
|
| Q |
222 |
tcttgtatgttc |
233 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
21727749 |
tcttttatgttc |
21727738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 12 - 244
Target Start/End: Complemental strand, 21648068 - 21647836
Alignment:
| Q |
12 |
atgaacgctgcaaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtcca |
111 |
Q |
| |
|
||||| ||||||||||||||||| | ||||| || | |||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| |
|
|
| T |
21648068 |
atgaaagctgcaaaagaacaaattctgtagttgttcttaaaatctggacacatctcatatgctatcaggttgagataagtagtagctgatgagtcgtcca |
21647969 |
T |
|
| Q |
112 |
caacaatctcaggaagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctac |
211 |
Q |
| |
|
|||| |||||||| ||||| || | |||| | ||| |||||||||||||||| | ||||||||| |||| ||| |||||||||||| |||||||||| |
|
|
| T |
21647968 |
caacgatctcaggtagagttagctttgcaatcaaccatccttcagagaaatccaagtctcttggacttcgagtcatgcttgacttaagtcttattcctac |
21647869 |
T |
|
| Q |
212 |
atctcttagatcttgtatgttccggtatgtcat |
244 |
Q |
| |
|
| |||||||||||||||| ||| ||||||||| |
|
|
| T |
21647868 |
ttttcttagatcttgtatgctcctgtatgtcat |
21647836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 21711238 - 21710997
Alignment:
| Q |
12 |
atgaacgctgcaaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtcca |
111 |
Q |
| |
|
||||| |||||||||||||||| || ||||| || | ||||||||||||||||||||| ||||| | ||||||||| |||| ||||||| |||||||| |
|
|
| T |
21711238 |
atgaaagctgcaaaagaacaaaatccatagtcgttcttaaaatctggacacatctcatacgctattaagttgaggaaagtagcagctgatgtgtcgtcca |
21711139 |
T |
|
| Q |
112 |
caacaatctcaggaagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctac |
211 |
Q |
| |
|
|||| |||||||| | ||||||| |||| || ||||||| |||||||| ||||||||||| ||| |||||||| ||||||| ||||||||| |
|
|
| T |
21711138 |
caacgatctcaggtaatgtcagttttgcaaccaatcatccttcggagaaatccatgtctcttggactttgtgtcttgctagacttaagtcttattcctat |
21711039 |
T |
|
| Q |
212 |
atctcttagatcttgtatgttccggtatgtcatcatcttgac |
253 |
Q |
| |
|
| ||||||||||| |||| ||| |||||||||||||||||| |
|
|
| T |
21711038 |
ttttcttagatcttttatgctcctgtatgtcatcatcttgac |
21710997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 15715138 - 15714910
Alignment:
| Q |
18 |
gctgcaaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtccacaacaa |
117 |
Q |
| |
|
|||| ||||||||| ||| ||||||| |||| |||||||||||| ||||||||||||||| |||||||||| |||| ||||| | || ||||||| | |
|
|
| T |
15715138 |
gctgaaaaagaacagatctcgtagtcgttatcaaaatctggacaaatctcatatgctatctggttgaggaaagtagcggctgtagtgttgtccacacgga |
15715039 |
T |
|
| Q |
118 |
tctcaggaagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctacatctct |
217 |
Q |
| |
|
|| |||||||||||||| |||| ||| ||||| ||||||||||||| ||| |||||||| |||||||||||||||| |||||||||| |||| |
|
|
| T |
15715038 |
tccgaggaagagtcagtttcgcagcaaaccatcctgcagagaaatctatctctgttggcctttgtgtcttgcttgacttaagtcttattcctactgctct |
15714939 |
T |
|
| Q |
218 |
tagatcttgtatgttccggtatgtcatca |
246 |
Q |
| |
|
||||||||||||| ||| |||||| |||| |
|
|
| T |
15714938 |
tagatcttgtatgctcctgtatgtaatca |
15714910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 247
Target Start/End: Complemental strand, 21653395 - 21653160
Alignment:
| Q |
12 |
atgaacgctgcaaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtcca |
111 |
Q |
| |
|
||||| ||||||||||||||||| || ||||| || | |||||| |||||||||||||||||||||| ||||||||| ||||||||||| | |||||||| |
|
|
| T |
21653395 |
atgaaagctgcaaaagaacaaattccatagtcgttctcaaaatcaggacacatctcatatgctatcaagttgaggaaagtagtggctgaagtgtcgtcca |
21653296 |
T |
|
| Q |
112 |
caacaatctcaggaagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctac |
211 |
Q |
| |
|
|||| |||||||||||| | |||| ||| || | | ||||||| |||||| |||||| ||||||| | || |||||||||||| ||| |||| | |
|
|
| T |
21653295 |
caacgatctcaggaagaattagttttgcggtaagccatccttcgtagaaattaatgtcttttggcctacgtgtgaagcttgacttaaatcttactcctgc |
21653196 |
T |
|
| Q |
212 |
atctcttagatcttgtatgttccggtatgtcatcat |
247 |
Q |
| |
|
|| |||||||||||||||||| ||||||||||| |
|
|
| T |
21653195 |
tgcttttagatcttgtatgttcctatatgtcatcat |
21653160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 249
Target Start/End: Complemental strand, 21697954 - 21697717
Alignment:
| Q |
12 |
atgaacgctgcaaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtcca |
111 |
Q |
| |
|
||||| ||| || |||||||||| ||||||| || | |||||| ||||||||||||||||||||||| ||||| | ||| |||| ||| |||||||| |
|
|
| T |
21697954 |
atgaaagctacataagaacaaattacgtagtcgttcttaaaatcgggacacatctcatatgctatcagattgagataagtaaaggctaatgtgtcgtcca |
21697855 |
T |
|
| Q |
112 |
caacaatctcaggaagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctac |
211 |
Q |
| |
|
|||| |||||||| ||||||||| |||| |||| ||||||| ||||||| ||||||||||| ||| |||||||||||||||| |||||||||| |
|
|
| T |
21697854 |
caacgatctcaggtagagtcagtgtcgcagcgaaccatccttcgcagaaatccatgtctcttgggctttgtgtcttgcttgacttaagtcttattcctac |
21697755 |
T |
|
| Q |
212 |
atctcttagatcttgtatgttccggtatgtcatcatct |
249 |
Q |
| |
|
|| |||||||||||||||||| ||||| ||||||| |
|
|
| T |
21697754 |
tgcttttagatcttgtatgttcctatatgtaatcatct |
21697717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 241
Target Start/End: Complemental strand, 21630279 - 21630061
Alignment:
| Q |
23 |
aaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtccacaacaatctca |
122 |
Q |
| |
|
|||||||||||| |||| || || | ||||||||||||||||||||||||||||||||||||||| || |||||| || | ||||| ||| | |
|
|
| T |
21630279 |
aaaagaacaaatttcgtaatcgttctcaaaatctggacacatctcatatgctatcaggttgaggaacatatgggctgaaccgttggtcacaatgatcata |
21630180 |
T |
|
| Q |
123 |
ggaagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctacatctcttagat |
222 |
Q |
| |
|
||||||||||||||||||| |||| ||||| | ||||||||||||||||||||||| ||| |||||| ||||| ||||||||||| || |||||| |
|
|
| T |
21630179 |
ggaagagtcagttctgcagcgaaccatcctccgcagaaatctatgtctcttggcctttgtgtcatgcttgtcttaagtcttattcctacagcttttagat |
21630080 |
T |
|
| Q |
223 |
cttgtatgttccggtatgt |
241 |
Q |
| |
|
|||||||||||| |||||| |
|
|
| T |
21630079 |
cttgtatgttcctgtatgt |
21630061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 243
Target Start/End: Complemental strand, 21657963 - 21657742
Alignment:
| Q |
22 |
caaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtccacaacaatctc |
121 |
Q |
| |
|
||||||||||||| || || || || | |||||||||||||||||||||||||||||||||| |||| ||| |||||| || | ||||| ||| |
|
|
| T |
21657963 |
caaaagaacaaattccataatcgttctcaaaatctggacacatctcatatgctatcaggttgcggaacgtatgggctgaactgttggacacaatgatcat |
21657864 |
T |
|
| Q |
122 |
aggaagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctacatctcttaga |
221 |
Q |
| |
|
|||||||||||||||||||| |||| ||||| | ||||||||||||||||| ||||| ||| |||||||||||| |||||||||| || ||||| |
|
|
| T |
21657863 |
aggaagagtcagttctgcagagaaccatcctccgcagaaatctatgtctcttagcctttgtgtcatgcttgacttaagtcttattcctactgcttttaga |
21657764 |
T |
|
| Q |
222 |
tcttgtatgttccggtatgtca |
243 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
21657763 |
tcttgtatgttcctgtatgtca |
21657742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 234
Target Start/End: Complemental strand, 21793286 - 21793102
Alignment:
| Q |
50 |
aaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtccacaacaatctcaggaagagtcagttctgcagtgaacaat |
149 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| ||| |||| |||||| |||| ||||| ||| ||||||||||||||||||||||||| || |
|
|
| T |
21793286 |
aaaatctggacacatctcatatgctgtcaggttgaagaaagtagaggctgaactgtcggtcacaatgatcataggaagagtcagttctgcagtgaaccat |
21793187 |
T |
|
| Q |
150 |
ccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctacatctcttagatcttgtatgttcc |
234 |
Q |
| |
|
|| || ||||||| ||||||| |||| ||| || ||||||||||||| ||||||||||| || |||||||||||||||||| |
|
|
| T |
21793186 |
ccatcggagaaatgtatgtcttttgggcttggtgtattgcttgacttaagtcttattcctacagcttttagatcttgtatgttcc |
21793102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 21994749 - 21994602
Alignment:
| Q |
20 |
tgcaaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtccacaacaatc |
119 |
Q |
| |
|
||||||||||||||| || ||||| || | |||||||||||||||||| |||||||||||||| |||| |||| ||||||| ||||||||||| ||| |
|
|
| T |
21994749 |
tgcaaaagaacaaattccatagtcgttctcaaaatctggacacatctcgtatgctatcaggttaaggatagtagcggctgatctatcgtccacaacgatc |
21994650 |
T |
|
| Q |
120 |
tcaggaagagtcagttctgcagtgaacaatccttcagagaaatctatg |
167 |
Q |
| |
|
||||||||||||| || ||||||||| ||||||||| ||| |||||| |
|
|
| T |
21994649 |
tcaggaagagtcaatttcgcagtgaaccatccttcagcgaattctatg |
21994602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 178
Target Start/End: Complemental strand, 21705804 - 21705651
Alignment:
| Q |
25 |
aagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtccacaacaatctcagg |
124 |
Q |
| |
|
||||||| ||||| |||| || | |||||||||||||||||||||||||||||||||||| || |||| ||||| || || |||| || |||| |
|
|
| T |
21705804 |
aagaacagatcccacagtcgttgtcaaaatctggacacatctcatatgctatcaggttgagtaaagtagaggctgcaaggttgttcacatagattacagg |
21705705 |
T |
|
| Q |
125 |
aagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggcct |
178 |
Q |
| |
|
|| |||||||| |||||| ||| ||||| ||| |||||||| |||| ||||||| |
|
|
| T |
21705704 |
aatagtcagttttgcagtaaaccatcctgcagtgaaatctacgtctgttggcct |
21705651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 230
Target Start/End: Complemental strand, 21765430 - 21765225
Alignment:
| Q |
25 |
aagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtccacaacaatctcagg |
124 |
Q |
| |
|
||||||| ||||| |||| || | |||||||||||||||||||||||||||||||||||| || ||| ||||| || || |||| || |||| |
|
|
| T |
21765430 |
aagaacagatcccacagtcgttgtcaaaatctggacacatctcatatgctatcaggttgagtaaattagaggctgcaaggttgttcacatagattacagg |
21765331 |
T |
|
| Q |
125 |
aagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctacatctcttagatct |
224 |
Q |
| |
|
|| |||||||| |||||| ||| ||||| ||| |||||||| |||| ||||||| || || ||||| ||||| |||||||||| ||||||||||| |
|
|
| T |
21765330 |
aatagtcagttttgcagtaaaccatcctgcagtgaaatctacgtctgttggcctccttgttgcgcttgtcttaagtcttattcctactgctcttagatct |
21765231 |
T |
|
| Q |
225 |
tgtatg |
230 |
Q |
| |
|
| |||| |
|
|
| T |
21765230 |
tctatg |
21765225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 21803815 - 21803896
Alignment:
| Q |
12 |
atgaacgctgcaaaagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtag |
93 |
Q |
| |
|
||||| ||| || ||||||||| | | ||||| || | |||||||||||||||||||||||| |||||||| ||||| |||| |
|
|
| T |
21803815 |
atgaaagctacataagaacaaaactcatagtcgttcttaaaatctggacacatctcatatgcaatcaggttaaggaaagtag |
21803896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 21624260 - 21624204
Alignment:
| Q |
202 |
ttattcctacatctcttagatcttgtatgttccggtatgtcatcatcttgacctttt |
258 |
Q |
| |
|
|||||||| || |||||||| ||||||||||| ||||||| |||||||||| |||| |
|
|
| T |
21624260 |
ttattcctccagttcttagattttgtatgttcctgtatgtcgtcatcttgacgtttt |
21624204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 230
Target Start/End: Complemental strand, 26774 - 26569
Alignment:
| Q |
25 |
aagaacaaatcccgtagtcattatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtccacaacaatctcagg |
124 |
Q |
| |
|
||||||||||| ||||| || | |||||||||||||||||||||||| | |||||||||||| ||| ||||| ||| || ||| ||| ||| |
|
|
| T |
26774 |
aagaacaaatctgatagtcgttgtcaaaatctggacacatctcatatgccaccaggttgaggaaaatagcggctgtaaagttgttcactgggatcctagg |
26675 |
T |
|
| Q |
125 |
aagagtcagttctgcagtgaacaatccttcagagaaatctatgtctcttggccttctcgtcttgcttgacttaaaatttattcctacatctcttagatct |
224 |
Q |
| |
|
|| |||||||| |||| ||| ||||| ||||||||||||||||| ||||| || || ||||| ||||| | |||||||||| ||||||||||| |
|
|
| T |
26674 |
aatagtcagtttcgcagaaaaccatcctgcagagaaatctatgtctgttggctttggtgtaaagcttgccttaagacttattcctactgctcttagatct |
26575 |
T |
|
| Q |
225 |
tgtatg |
230 |
Q |
| |
|
| |||| |
|
|
| T |
26574 |
tctatg |
26569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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