View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11274_high_13 (Length: 536)

Name: NF11274_high_13
Description: NF11274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11274_high_13
NF11274_high_13
[»] chr7 (38 HSPs)
chr7 (1-402)||(44724223-44724620)
chr7 (1-295)||(22828881-22829171)
chr7 (1-198)||(21679875-21680068)
chr7 (393-521)||(44723713-44723841)
chr7 (1-172)||(39146235-39146402)
chr7 (1-298)||(27832881-27833196)
chr7 (1-160)||(21677952-21678107)
chr7 (1-171)||(24748470-24748635)
chr7 (1-143)||(25276044-25276182)
chr7 (1-93)||(11355207-11355299)
chr7 (227-295)||(21677796-21677864)
chr7 (38-170)||(20091826-20091954)
chr7 (1-87)||(37412376-37412462)
chr7 (1-93)||(20137357-20137449)
chr7 (227-295)||(24748346-24748414)
chr7 (1-88)||(18567567-18567654)
chr7 (1-88)||(27306477-27306564)
chr7 (1-88)||(31435295-31435382)
chr7 (1-93)||(4296183-4296276)
chr7 (1-88)||(44518-44605)
chr7 (1-88)||(443549-443636)
chr7 (17-165)||(7188424-7188568)
chr7 (1-88)||(1049543-1049630)
chr7 (230-293)||(21679759-21679822)
chr7 (3-82)||(24258423-24258502)
chr7 (1-88)||(31156159-31156246)
chr7 (1-87)||(21990106-21990191)
chr7 (227-295)||(39146456-39146524)
chr7 (1-88)||(35583-35670)
chr7 (1-88)||(13099724-13099811)
chr7 (1-88)||(40836990-40837077)
chr7 (1-88)||(42331247-42331334)
chr7 (1-88)||(22251790-22251877)
chr7 (1-88)||(25542485-25542571)
chr7 (1-88)||(26804527-26804610)
chr7 (38-87)||(3677235-3677284)
chr7 (3-68)||(21592393-21592458)
chr7 (20-88)||(22392427-22392495)
[»] chr8 (36 HSPs)
chr8 (1-299)||(33541636-33541930)
chr8 (1-241)||(27107145-27107380)
chr8 (1-171)||(14477197-14477363)
chr8 (1-171)||(15185958-15186124)
chr8 (3-163)||(25952450-25952606)
chr8 (3-104)||(5372428-5372528)
chr8 (1-88)||(14419439-14419526)
chr8 (7-93)||(35872632-35872718)
chr8 (1-88)||(1225166-1225253)
chr8 (1-92)||(5622986-5623077)
chr8 (1-88)||(18810708-18810795)
chr8 (5-171)||(26775123-26775284)
chr8 (227-296)||(27107387-27107456)
chr8 (1-93)||(13858732-13858824)
chr8 (227-295)||(26774978-26775046)
chr8 (1-93)||(30480751-30480843)
chr8 (1-88)||(18812893-18812980)
chr8 (1-87)||(36865538-36865625)
chr8 (1-88)||(3886166-3886253)
chr8 (1-88)||(4424018-4424105)
chr8 (1-88)||(14807751-14807838)
chr8 (1-88)||(15072710-15072797)
chr8 (1-88)||(27826986-27827073)
chr8 (1-88)||(27829297-27829384)
chr8 (1-111)||(27910992-27911101)
chr8 (1-111)||(27957411-27957520)
chr8 (16-111)||(21482301-21482394)
chr8 (3-88)||(41382673-41382758)
chr8 (1-60)||(37214458-37214517)
chr8 (1-88)||(44720843-44720930)
chr8 (16-88)||(2468361-2468433)
chr8 (1-88)||(181537-181624)
chr8 (1-88)||(28251815-28251902)
chr8 (2-88)||(15067981-15068067)
chr8 (43-88)||(14419787-14419832)
chr8 (227-295)||(15186179-15186247)
[»] chr3 (71 HSPs)
chr3 (1-296)||(28137541-28137832)
chr3 (1-242)||(43421661-43421897)
chr3 (1-199)||(1626929-1627123)
chr3 (1-199)||(36011644-36011838)
chr3 (1-296)||(28100287-28100599)
chr3 (1-171)||(43423709-43423877)
chr3 (2-171)||(53468702-53468867)
chr3 (1-243)||(28102248-28102486)
chr3 (1-194)||(5927010-5927202)
chr3 (1-103)||(47701841-47701943)
chr3 (1-151)||(28180889-28181033)
chr3 (51-171)||(4663764-4663880)
chr3 (1-111)||(54884058-54884168)
chr3 (1-93)||(3314603-3314695)
chr3 (17-219)||(23633257-23633455)
chr3 (227-293)||(1627172-1627238)
chr3 (1-87)||(3306724-3306810)
chr3 (1-87)||(6231374-6231460)
chr3 (1-93)||(880698-880790)
chr3 (1-88)||(51943295-51943382)
chr3 (226-296)||(36011526-36011596)
chr3 (8-93)||(890024-890109)
chr3 (1-88)||(3859452-3859539)
chr3 (1-88)||(5522861-5522948)
chr3 (1-88)||(15780784-15780871)
chr3 (1-88)||(43226010-43226097)
chr3 (227-296)||(5927256-5927325)
chr3 (1-82)||(6561740-6561821)
chr3 (227-295)||(7754063-7754131)
chr3 (1-88)||(11170328-11170415)
chr3 (1-88)||(26720472-26720559)
chr3 (1-88)||(43228215-43228302)
chr3 (232-295)||(43423937-43424000)
chr3 (1-88)||(53591119-53591206)
chr3 (1-87)||(10956273-10956359)
chr3 (1-87)||(51675001-51675087)
chr3 (1-94)||(54691820-54691912)
chr3 (17-219)||(23636824-23637022)
chr3 (1-93)||(28761674-28761766)
chr3 (1-88)||(4308527-4308614)
chr3 (1-88)||(5191577-5191664)
chr3 (1-88)||(11163074-11163161)
chr3 (1-88)||(22114551-22114638)
chr3 (1-88)||(35777345-35777432)
chr3 (1-88)||(39715394-39715480)
chr3 (1-88)||(45882863-45882950)
chr3 (1-88)||(51727252-51727339)
chr3 (1-87)||(10958569-10958655)
chr3 (3-88)||(12268214-12268299)
chr3 (1-88)||(18162588-18162674)
chr3 (255-295)||(8183209-8183249)
chr3 (1-88)||(18097146-18097234)
chr3 (1-88)||(1313334-1313420)
chr3 (1-88)||(24979631-24979718)
chr3 (1-88)||(32264285-32264376)
chr3 (226-298)||(28102490-28102563)
chr3 (12-88)||(1321365-1321441)
chr3 (1-88)||(18099416-18099503)
chr3 (38-110)||(53597143-53597215)
chr3 (25-88)||(6484309-6484372)
chr3 (16-93)||(31151266-31151345)
chr3 (1-88)||(35918195-35918282)
chr3 (257-296)||(43421933-43421972)
chr3 (1-88)||(47149141-47149233)
chr3 (1-88)||(48361917-48362003)
chr3 (1-88)||(53915742-53915829)
chr3 (127-193)||(562129-562195)
chr3 (180-242)||(43423865-43423926)
chr3 (60-165)||(1673826-1673927)
chr3 (39-111)||(13420456-13420528)
chr3 (1-81)||(32219026-32219106)
[»] chr2 (38 HSPs)
chr2 (5-295)||(22163199-22163485)
chr2 (3-295)||(11739810-11740078)
chr2 (3-243)||(15539725-15539962)
chr2 (1-169)||(38019986-38020150)
chr2 (1-169)||(3022006-3022170)
chr2 (1-171)||(34979827-34979993)
chr2 (1-199)||(14837087-14837280)
chr2 (1-111)||(44289316-44289426)
chr2 (1-88)||(22407657-22407744)
chr2 (1-93)||(17849032-17849124)
chr2 (1-88)||(13910292-13910379)
chr2 (1-88)||(19504593-19504680)
chr2 (1-88)||(40032306-40032393)
chr2 (1-88)||(42064435-42064522)
chr2 (1-88)||(42452703-42452790)
chr2 (3-93)||(19007555-19007645)
chr2 (227-295)||(3021839-3021907)
chr2 (1-93)||(31733013-31733105)
chr2 (1-88)||(22287584-22287671)
chr2 (1-88)||(24162460-24162547)
chr2 (1-87)||(19502259-19502345)
chr2 (234-295)||(14836971-14837032)
chr2 (16-88)||(18800565-18800637)
chr2 (1-93)||(28196552-28196644)
chr2 (229-293)||(34980072-34980136)
chr2 (1-88)||(27104719-27104806)
chr2 (180-242)||(38019933-38019996)
chr2 (251-296)||(15539991-15540036)
chr2 (4-87)||(6264396-6264479)
chr2 (16-111)||(37963190-37963285)
chr2 (1-88)||(43623816-43623903)
chr2 (38-111)||(12342695-12342767)
chr2 (1-93)||(17848360-17848450)
chr2 (1-48)||(5377677-5377724)
chr2 (1-88)||(21520941-21521030)
chr2 (1-88)||(42923757-42923846)
chr2 (59-111)||(17897548-17897601)
chr2 (50-93)||(35028494-35028538)
[»] chr6 (45 HSPs)
chr6 (1-243)||(13039582-13039820)
chr6 (1-296)||(3630112-3630423)
chr6 (1-242)||(25477103-25477340)
chr6 (1-242)||(3632186-3632420)
chr6 (1-243)||(13057022-13057260)
chr6 (1-199)||(24338696-24338890)
chr6 (1-199)||(12161803-12161996)
chr6 (1-171)||(10584026-10584187)
chr6 (1-171)||(22490539-22490706)
chr6 (1-171)||(13870670-13870835)
chr6 (60-199)||(20220000-20220135)
chr6 (227-295)||(24338960-24339028)
chr6 (60-169)||(22114014-22114119)
chr6 (227-295)||(13039509-13039577)
chr6 (1-93)||(32447564-32447656)
chr6 (1-88)||(3390358-3390445)
chr6 (1-88)||(8995458-8995545)
chr6 (1-88)||(9019905-9019992)
chr6 (1-94)||(3233979-3234071)
chr6 (226-295)||(3632425-3632494)
chr6 (1-168)||(14466237-14466399)
chr6 (227-295)||(13056949-13057017)
chr6 (1-88)||(1072125-1072212)
chr6 (1-88)||(19227656-19227743)
chr6 (1-88)||(14507423-14507510)
chr6 (1-88)||(30729076-30729163)
chr6 (227-297)||(13870841-13870911)
chr6 (51-171)||(3028148-3028265)
chr6 (17-93)||(15346365-15346441)
chr6 (227-295)||(22490415-22490483)
chr6 (1-88)||(11983277-11983364)
chr6 (1-88)||(15532929-15533016)
chr6 (1-88)||(15541388-15541475)
chr6 (1-88)||(17852521-17852608)
chr6 (1-88)||(28241569-28241656)
chr6 (227-293)||(10583884-10583950)
chr6 (1-88)||(12195763-12195850)
chr6 (1-88)||(15530370-15530457)
chr6 (50-171)||(25466467-25466583)
chr6 (1-81)||(14459013-14459093)
chr6 (3-88)||(30034853-30034942)
chr6 (227-269)||(20219938-20219980)
chr6 (229-290)||(14466136-14466197)
chr6 (45-93)||(11138277-11138325)
chr6 (4-88)||(32279976-32280059)
[»] chr1 (54 HSPs)
chr1 (1-294)||(25251525-25251814)
chr1 (1-296)||(25248764-25249055)
chr1 (1-242)||(18839382-18839618)
chr1 (1-199)||(50248822-50249016)
chr1 (1-167)||(31489784-31489946)
chr1 (1-243)||(17323858-17324096)
chr1 (1-169)||(17186378-17186542)
chr1 (1-87)||(18307054-18307140)
chr1 (1-111)||(31423124-31423234)
chr1 (1-93)||(11457725-11457817)
chr1 (227-295)||(17323785-17323853)
chr1 (1-93)||(50076922-50077014)
chr1 (1-93)||(17318832-17318924)
chr1 (1-93)||(50079071-50079163)
chr1 (1-88)||(6756471-6756558)
chr1 (227-298)||(50249065-50249136)
chr1 (1-88)||(51749983-51750070)
chr1 (1-88)||(13215025-13215112)
chr1 (1-88)||(15823490-15823577)
chr1 (1-88)||(17324886-17324973)
chr1 (1-88)||(41646864-41646951)
chr1 (227-297)||(17186620-17186690)
chr1 (1-88)||(13761781-13761868)
chr1 (1-88)||(16226111-16226198)
chr1 (1-88)||(20302403-20302490)
chr1 (1-88)||(28207316-28207403)
chr1 (1-88)||(38925728-38925815)
chr1 (1-88)||(47451592-47451679)
chr1 (1-67)||(31425269-31425335)
chr1 (3-88)||(51752309-51752394)
chr1 (1-93)||(16428592-16428684)
chr1 (1-93)||(50307797-50307889)
chr1 (1-88)||(2949481-2949568)
chr1 (1-88)||(6822959-6823046)
chr1 (1-111)||(9241336-9241446)
chr1 (229-296)||(31489726-31489793)
chr1 (17-111)||(14183852-14183945)
chr1 (38-88)||(30790681-30790731)
chr1 (1-88)||(31735771-31735862)
chr1 (50-165)||(43104030-43104141)
chr1 (43-96)||(18800861-18800914)
chr1 (20-93)||(49495468-49495541)
chr1 (1-89)||(2617459-2617547)
chr1 (1-88)||(6995950-6996037)
chr1 (1-88)||(10400078-10400165)
chr1 (254-293)||(18839311-18839350)
chr1 (1-88)||(20291401-20291488)
chr1 (1-88)||(28998503-28998590)
chr1 (1-88)||(29004219-29004306)
chr1 (38-93)||(40133874-40133929)
chr1 (50-93)||(42922173-42922216)
chr1 (1-88)||(28842437-28842526)
chr1 (38-111)||(16431022-16431095)
chr1 (1-88)||(6823828-6823916)
[»] chr5 (40 HSPs)
chr5 (1-295)||(695631-695920)
chr5 (4-198)||(10474574-10474764)
chr5 (1-197)||(39398241-39398431)
chr5 (1-198)||(17072721-17072914)
chr5 (1-199)||(24126693-24126887)
chr5 (38-199)||(2723804-2723961)
chr5 (1-171)||(20042915-20043081)
chr5 (1-171)||(20044875-20045041)
chr5 (1-171)||(34530914-34531079)
chr5 (1-94)||(25904041-25904134)
chr5 (1-93)||(31472861-31472953)
chr5 (3-88)||(20507712-20507797)
chr5 (1-88)||(2818584-2818671)
chr5 (1-88)||(4236573-4236660)
chr5 (1-88)||(31179619-31179706)
chr5 (1-88)||(40221466-40221553)
chr5 (239-292)||(2723698-2723751)
chr5 (235-296)||(20044756-20044817)
chr5 (1-81)||(17818738-17818817)
chr5 (4-88)||(37706031-37706115)
chr5 (1-88)||(38882049-38882137)
chr5 (1-88)||(2174863-2174950)
chr5 (1-88)||(25921721-25921808)
chr5 (1-88)||(31542679-31542766)
chr5 (1-88)||(31545024-31545111)
chr5 (234-295)||(24126579-24126640)
chr5 (8-88)||(26098506-26098586)
chr5 (1-88)||(6756438-6756525)
chr5 (1-88)||(12556171-12556258)
chr5 (1-88)||(21947971-21948057)
chr5 (1-88)||(39854428-39854514)
chr5 (17-88)||(41585970-41586041)
chr5 (16-93)||(36208519-36208597)
chr5 (227-295)||(20042770-20042838)
chr5 (1-88)||(10529347-10529434)
chr5 (1-88)||(26097677-26097764)
chr5 (1-48)||(27912520-27912567)
chr5 (230-269)||(42770523-42770562)
chr5 (1-88)||(16776101-16776189)
chr5 (226-278)||(17072619-17072671)
[»] chr4 (57 HSPs)
chr4 (1-295)||(38270234-38270543)
chr4 (1-171)||(2891235-2891402)
chr4 (1-208)||(3937457-3937659)
chr4 (1-199)||(6132764-6132957)
chr4 (1-171)||(18409595-18409759)
chr4 (205-296)||(47564497-47564588)
chr4 (7-93)||(24446833-24446919)
chr4 (227-296)||(6132646-6132715)
chr4 (1-93)||(12396093-12396185)
chr4 (1-93)||(12401055-12401147)
chr4 (3-93)||(19095875-19095965)
chr4 (1-88)||(11434953-11435040)
chr4 (1-88)||(51015244-51015331)
chr4 (3-87)||(37313316-37313400)
chr4 (1-93)||(38928426-38928518)
chr4 (1-88)||(5198418-5198505)
chr4 (1-88)||(22044638-22044725)
chr4 (1-88)||(22802982-22803069)
chr4 (1-88)||(24888794-24888881)
chr4 (1-88)||(36378290-36378377)
chr4 (1-88)||(40637072-40637159)
chr4 (1-88)||(47274725-47274812)
chr4 (1-88)||(48486317-48486404)
chr4 (1-88)||(36919833-36919922)
chr4 (1-93)||(33415735-33415827)
chr4 (1-93)||(41997485-41997577)
chr4 (1-88)||(619695-619782)
chr4 (1-88)||(5100995-5101082)
chr4 (1-88)||(9174394-9174481)
chr4 (1-88)||(22046933-22047020)
chr4 (1-88)||(22801110-22801197)
chr4 (1-88)||(24878987-24879074)
chr4 (1-88)||(24880449-24880536)
chr4 (1-88)||(31849847-31849934)
chr4 (1-88)||(40091663-40091750)
chr4 (1-88)||(7941317-7941406)
chr4 (246-296)||(27498964-27499014)
chr4 (59-163)||(31983837-31983937)
chr4 (1-86)||(9176722-9176807)
chr4 (1-88)||(6764837-6764924)
chr4 (1-88)||(47868399-47868486)
chr4 (1-87)||(56030443-56030529)
chr4 (16-88)||(18537733-18537806)
chr4 (1-88)||(2485120-2485208)
chr4 (139-171)||(27499076-27499108)
chr4 (1-88)||(37089619-37089709)
chr4 (1-88)||(14633318-14633404)
chr4 (1-88)||(16453307-16453394)
chr4 (1-88)||(16934391-16934478)
chr4 (1-88)||(44600086-44600173)
chr4 (17-111)||(15032800-15032894)
chr4 (1-88)||(47210988-47211081)
chr4 (43-88)||(8756540-8756585)
chr4 (17-82)||(19322701-19322766)
chr4 (263-295)||(2891134-2891166)
chr4 (38-90)||(12102086-12102138)
chr4 (255-295)||(18537989-18538029)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-101)||(35580-35679)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-93)||(79807-79899)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-86)||(79140-79225)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-88)||(3950-4037)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-88)||(2833-2920)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-88)||(11721-11808)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-88)||(14972-15059)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-88)||(41731-41818)
[»] scaffold0552 (1 HSPs)
scaffold0552 (1-88)||(1079-1166)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-88)||(6152-6239)
[»] scaffold0224 (1 HSPs)
scaffold0224 (50-93)||(16115-16158)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-88)||(183888-183974)
[»] scaffold0511 (1 HSPs)
scaffold0511 (1-47)||(2036-2082)


Alignment Details
Target: chr7 (Bit Score: 308; Significance: 1e-173; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 44724620 - 44724223
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44724620 agttttgttgttgcctttctaaacccttgtttcagccccctatatctccaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataa 44724521  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    |||| ||||||   ||||||||||||||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  44724520 aactagaacaa---atctaggtccgaaaa-tacgtttctgttttattttctgctatcaaaatcagccaccgtgctcaccaaatcggccaccgatttttgt 44724425  T
Q  201 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaaaata 300  Q
     ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||  |    
T  44724424 cgaatcaacagacaaaaaaccagagttgaaaatcggccaccgattttcagcttccagaatttcaattttttcaattttgaggcacgttcacaacaaatca 44724325  T
Q  301 cactctgatcagagtgtaaaatggagctgaactaaagaaaaaattgtttaaaaaatatcatttaccattgtttcagttatggagctttgtttcaaatcca 400  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44724324 cactctgatcagagtgtaaaatggagctgaactaaaggaaaaattgtttaaaaaatatcatttaccattgtttcagttatggagttttgtttcaaatcca 44724225  T

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Target: chr7; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 22828881 - 22829171
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    |||||||||||||||||||||||  ||||||| ||  |||| |||||| |||||||| | |||||||   |||||||||||||||||| ||||   ||||    
T  22828881 agttttgttgttgcctttctaaactcttgtttcagccccctctatctcaaggtttactcggatacaaagcctatatttatagtaaaagtatccctcataa 22828980  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgct-caccaaatcggccaccgatttttg 199  Q
    ||||||   |||||||||||| ||| ||||||||||| |||||||||| ||||||| ||||||||||||||   | |||| | |||  |||| ||||||     
T  22828981 aactgg---aacaaatctaggcccg-aaaatacgtttctgttttatttcctgctgttaaaatcggccaccgaattgcacc-attcgaacaccaatttttc 22829075  T
Q  200 tggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    | |||||||||||||||||| |||   | |||||||||||| ||||||| |||||||||||| |||||| |||||||||||| |||||||||||||    
T  22829076 tcgaaccaacagacaaaaaaccagcacttaaaatcggccactgattttctacttccagaattccaatttcttcaattttgagtcactttcacaaca 22829171  T

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Target: chr7; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 21680068 - 21679875
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| |    
T  21680068 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagaatcctcaatta 21679969  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg--tgctcaccaaatcggccaccgattttt 198  Q
    |||||||   ||||||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||| |  ||||||  |||||||||||| ||||||    
T  21679968 aactgga---acaaatctaggcccg-aaaatacgtttctattttattttctgctgtcaaaatcggccactgaatgctca--aaatcggccaccaattttt 21679875  T

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Target: chr7; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 393 - 521
Target Start/End: Complemental strand, 44723841 - 44723713
Alignment:
Q  393 caaatccatgtgcattcttacacctctgggatgacgttcatggtaaaaaatttagatgnnnnnnncacaggataattatttatgttgaatttgatgcatt 492  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| ||||    
T  44723841 caaatccatgtgcattcttacacctttgggatgacgttcatggtaaaaaatttagatgtttttttcacaggataattatttatgttgaatttgattcatt 44723742  T
Q  493 tgtattttgtcgaaaaataatgagattcc 521  Q
    ||||||||||| |||||||||||||||||    
T  44723741 tgtattttgtcaaaaaataatgagattcc 44723713  T

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Target: chr7; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 39146235 - 39146402
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||| || |||||| |||||||| ||  ||||  ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  39146235 agttttgttgttgtctatctaaacccttgtttcagccccctccatctcaaggtttacactgatacagtgtctatatttatagtaaaagaatcctcaataa 39146334  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgt 172  Q
    || |||   |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  39146335 aattgg---aacaaatctaggtctg-aaaatacgtttctgttttattttctgctgtcaaaatcggccaccgt 39146402  T

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Target: chr7; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 27832881 - 27833196
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtacc-ctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 99  Q
    |||| ||||||||||||| |||| |||||||| ||  || || |||| | |||||| | ||||||||  | |||||||||||||||||||||| ||||||    
T  27832881 agttctgttgttgcctttttaaacccttgtttcagctccactctatcacaaggtttgctctgatacacaacctatatttatagtaaaagaatcatcaata 27832980  T
Q  100 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 199  Q
    |||||||   |||||||||||| ||| ||||||| ||| |||||||||||||||||||||||| ||||||||  |||   | |||||||||||||||||     
T  27832981 aaactgg---aacaaatctaggcccg-aaaatacatttctgttttattttctgctgtcaaaattggccaccgaactccatatatcggccaccgatttttt 27833076  T
Q  200 tggaaccaacagacaaaaaatcagagt---------------------tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttt 278  Q
      |||||||||||||||||| ||||||                     ||||||||||||||||||||||  |||||||||||  ||||| |||||||||    
T  27833077 ccgaaccaacagacaaaaaaccagagtgcaaaatcagccaccaaaccctgaaaatcggccaccgattttctgcttccagaattctaatttcttcaatttt 27833176  T
Q  279 gaggcactttcacaacaaaa 298  Q
    ||||||||||||||||||||    
T  27833177 gaggcactttcacaacaaaa 27833196  T

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Target: chr7; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 21678107 - 21677952
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||| ||||||||||||||| |||||||| ||  |||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21678107 agttttgatgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacattgatacaatatctatatttatagtaaaagaatcctcaataa 21678008  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaa 160  Q
    |||||    |||||||||| | ||| ||||||  ||| ||||||||||||||||||||||    
T  21678007 aactg---aaacaaatctaagcccg-aaaatatttttttgttttattttctgctgtcaaa 21677952  T

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Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 24748635 - 24748470
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    |||||| |||||| ||||||||| |||||||| ||  |||| ||  || | ||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  24748635 agttttattgttgtctttctaaacccttgtttcagccccctctaagtcaaagtttacactgatacaatgtctatatttataataaaagaatc-tcaataa 24748537  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 171  Q
    |||||||||||   ||||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||||    
T  24748536 aactggaacaa---atctagggccgaaaa-tacgtttctgttttattttctgctgtcaaaattggccaccg 24748470  T

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Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 25276182 - 25276044
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||||  |||||||||  |||| |||||| | |||| | |||||||||    |||||||||||||||||||||||||||||    
T  25276182 agttttgttgttgcctttctaaattattgttttagccccctctatctcaaagtttgctctgatacaaagcatatatttatagtaaaagaatcctcaataa 25276083  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttt 143  Q
    |||||||   ||||||||||| ||| |||||||||||||||||    
T  25276082 aactgga---acaaatctaggcccg-aaaatacgtttatgttt 25276044  T

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Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 11355299 - 11355207
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||   |||||||||||||||||||||||    
T  11355299 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaaagcctatatttatagtaaaagaatcc 11355207  T

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Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 21677864 - 21677796
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    ||||||||||||||||||||||| ||||||| ||| |||||| ||||||||||||||||||||||||||    
T  21677864 tgaaaatcggccaccgattttcagcttccaggattccaatttcttcaattttgaggcactttcacaaca 21677796  T

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Target: chr7; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 38 - 170
Target Start/End: Original strand, 20091826 - 20091954
Alignment:
Q  38 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgttt 137  Q
    |||| |||||| |||||||| |||||| ||  ||||||||||||||||||| ||||   |||||| ||||||||   ||||||| | ||||| |||||||    
T  20091826 ccctctatctcaaggtttactctgataaaaagtctatatttatagtaaaagtatccctcataaaattggaacaa---atctaggcctgaaaa-tacgttt 20091921  T
Q  138 atgttttattttctgctgtcaaaatcggccacc 170  Q
     |||||||||| |||||||||||||||||||||    
T  20091922 ctgttttatttcctgctgtcaaaatcggccacc 20091954  T

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Target: chr7; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37412376 - 37412462
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 87  Q
    ||||||||||||||| ||||||| |||||||| ||  |||||||||||||||||||| ||||| |||  ||||||||||||||||||    
T  37412376 agttttgttgttgccattctaaacccttgtttcagccccctatatctccaggtttactctgattcaaggtctatatttatagtaaaa 37412462  T

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Target: chr7; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 20137357 - 20137449
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||   | |||||||||||||||||||||    
T  20137357 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagccaatatttatagtaaaagaatcc 20137449  T

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Target: chr7; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 24748414 - 24748346
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    |||||||| |||||||||||||| |||||||||||  |||||||||||||||||| |||||||||||||    
T  24748414 tgaaaatcagccaccgattttcagcttccagaattctaattttttcaattttgagtcactttcacaaca 24748346  T

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Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18567654 - 18567567
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  || | |||||| | |||||| ||||||||| ||||||||||||||||||||    
T  18567654 agttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaag 18567567  T

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Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 27306477 - 27306564
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  27306477 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 27306564  T

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Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31435295 - 31435382
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  || | |||||| | |||||| ||||||||| ||||||||||||||||||||    
T  31435295 agttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaag 31435382  T

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Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4296183 - 4296276
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatac-aatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||| | ||||||| |||||||| ||  |||| |||||| |||||||||||||||| ||| ||||||||||||||||||| ||||    
T  4296183 agttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttacactgatacaaatgtctatatttatagtaaaagcatcc 4296276  T

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Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44605 - 44518
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  44605 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 44518  T

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Target: chr7; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 443636 - 443549
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| ||||||| | |||||||||  |||| |||||| |||||||| ||||| |||  |||||||||||||||||||    
T  443636 agttttgttgttgccattctaaaccattgttttagctccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaag 443549  T

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Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 7188568 - 7188424
Alignment:
Q  17 ttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaat 116  Q
    ||||||| |||||||| ||  |||| |||||| |||||||| |||||||||  ||||||||||||||||||| ||||   |||||| |||   |||||||    
T  7188568 ttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattgg---aacaaat 7188472  T
Q  117 ctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcgg 165  Q
    ||  | || ||||||||||||||||| |||||||| ||| |||| ||||    
T  7188471 ctcag-cccaaaaatacgtttatgttatattttctcctgacaaattcgg 7188424  T

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Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1049543 - 1049630
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | || ||||||  |||||||||||||||||||    
T  1049543 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaag 1049630  T

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Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 21679822 - 21679759
Alignment:
Q  230 aaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaa 293  Q
    ||||||||||||||| |||| ||||||||||| |||||| || | |||||||||||||||||||    
T  21679822 aaatcggccaccgatgttcagcttccagaattccaatttcttaatttttgaggcactttcacaa 21679759  T

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Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 24258502 - 24258423
Alignment:
Q  3 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatag 82  Q
    ||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||| ||||||||| | ||||||||||||    
T  24258502 ttttgttgttgcctttctaaacccttgtttcagccccctctatctcaatgtttactctgatacaaaacctatatttatag 24258423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31156159 - 31156246
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  31156159 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgccttgatacaagctctatatttatagtaaaag 31156246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21990191 - 21990106
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 87  Q
    ||||||||||||| | ||||||| |||||||| ||  |||| ||||||||||||||| ||||| |||  ||||||||||||||||||    
T  21990191 agttttgttgttgtcattctaaacccttgtttcagc-ccctctatctccaggtttactctgattcaaggtctatatttatagtaaaa 21990106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 39146456 - 39146524
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    ||||||||| |||||| |||||  |||||| |||| |||||| |||||||||||| |||||||||||||    
T  39146456 tgaaaatcgaccaccggttttctgcttccaaaattccaatttcttcaattttgagtcactttcacaaca 39146524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 35670 - 35583
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| |||||| || |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  35670 agttttgttgttgtctttctgaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 35583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 13099724 - 13099811
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| ||||||| |||||||| |   |||| |||||| ||||||||  |||| |||  |||||||||||||||||||    
T  13099724 agttttgttgttgccattctaaacccttgtttcaaccccctctatctcaaggtttactttgattcaaggtctatatttatagtaaaag 13099811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40836990 - 40837077
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||| ||| ||  ||||  |||||||  ||| | |||||||||  |||||||||||||||||||    
T  40836990 agttttgttgttgcctttctaaacccttctttcagccccctcaatctccaaatttgctctgatacaaggtctatatttatagtaaaag 40837077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 42331247 - 42331334
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| | ||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  42331247 agttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaag 42331334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22251790 - 22251877
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||||||||||||||  ||||||| ||   ||| |||||| | |||||| ||||| |||  | |||||||||||||||||    
T  22251790 agttttgttgttgcctttctaaactcttgtttcagcctcctctatctcaaagtttactctgattcaaggtttatatttatagtaaaag 22251877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25542571 - 25542485
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||| |||||||||| | |||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  25542571 agttttgttgttacctttctaaacctttgtttcagc-ccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 25542485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26804610 - 26804527
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||| |    ||||  |||||||||||||||||||    
T  26804610 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactc----acaaggtctatatttatagtaaaag 26804527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 3677284 - 3677235
Alignment:
Q  38 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 87  Q
    |||| |||||||| |||||| ||||| ||| |||||||||||||||||||    
T  3677284 ccctctatctccaagtttactctgattcaagatctatatttatagtaaaa 3677235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 21592393 - 21592458
Alignment:
Q  3 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaat 68  Q
    |||||||||||| |||||||| | |||||| ||  |||| |||||| | |||||||||||||||||    
T  21592393 ttttgttgttgcatttctaaacctttgtttcagccccctctatctcaaagtttacactgatacaat 21592458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 22392495 - 22392427
Alignment:
Q  20 taaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  22392495 taaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 22392427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 33541636 - 33541930
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33541636 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaatgtttacactgatacaatgtctatatttatagtaaaagaatcctcaataa 33541735  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    |||| ||||||   ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||     
T  33541736 aactcgaacaa---atctaggcccgaaaa-tacgtttctgttttattttctgctgtcaaaatcggccatcgtgctcaccaaatcagccaccgatttttgc 33541831  T
Q  201 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaaaat 299  Q
     |||||||||||||||||| || |||  ||||||||||||||||||||| ||||||||||| |||||| || |||||||||||||||||||||||||||    
T  33541832 cgaaccaacagacaaaaaaacaaagtccaaaatcggccaccgattttcagcttccagaattccaatttctttaattttgaggcactttcacaacaaaat 33541930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 27107145 - 27107380
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  27107145 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttatactgatacaatgtctatatttatagtaaaagaatcctcaataa 27107244  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    ||||||   |||||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||| ||    | ||||||||||||||||||||||     
T  27107245 aactgg---aacaaatctaggcccg-aaaatacgtttctattttattttctgctgtcaaaatcggccatcgaatgctccaaatcggccaccgatttttgc 27107340  T
Q  201 ggaaccaacagacaaaaaatcagagttgaaaatcggccacc 241  Q
     ||||||| || | | ||| ||||||  |||||||||||||    
T  27107341 cgaaccaa-aggccataaaacagagtccaaaatcggccacc 27107380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 14477363 - 14477197
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| |   |||| |||||| |||||| | |||||||||   ||||||||||||||||||||||||||||||    
T  14477363 agttttgttgttgcctttctaaacccttgtttcaaccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaagaatcctcaataa 14477264  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 171  Q
    ||||||   || ||||||||  ||| ||||||||||| | ||||||||  |||||||||||||||||||||    
T  14477263 aactgg---aataaatctagacccg-aaaatacgtttctattttatttcttgctgtcaaaatcggccaccg 14477197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 15185958 - 15186124
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||| ||  ||||||||| |||||||| |||  ||| |||||| |||||||| |||||||||  | ||||||||||||||||| ||||   ||||    
T  15185958 agttttgttattttctttctaaacccttgtttcagtcacctttatctcaaggtttactctgatacaaagtttatatttatagtaaaagtatccctcataa 15186057  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 171  Q
    || |||   |||||||||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  15186058 aattgg---aacaaatctaggcccg-aaaatacgtttctgttttatttcctgctgtcaaaatcggccaccg 15186124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 25952606 - 25952450
Alignment:
Q  3 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaa 102  Q
    |||| |||||||||||||||| |||||||| ||  |||| |||||| |||||| | |||||||||    |||||||||||||||||||||||||||||||    
T  25952606 ttttattgttgcctttctaaacccttgtttcagccccctctatctcaaggtttcctctgatacaaagcttatatttatagtaaaagaatcctcaataaaa 25952507  T
Q  103 ctggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatc 163  Q
    |||||   ||||||||| | ||| ||||||||||| |  ||||||| ||| ||||||||||    
T  25952506 ctgga---acaaatctaagcccg-aaaatacgtttcttgtttatttcctgttgtcaaaatc 25952450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 5372428 - 5372528
Alignment:
Q  3 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaa 102  Q
    ||||||||||||||||||||| |||||||| ||  |||| |||||| || |||||||||||||||| |||||| ||||||||||||||||||||||| ||    
T  5372428 ttttgttgttgcctttctaaacccttgtttcagc-ccctctatctcaagatttacactgatacaatgtctataattatagtaaaagaatcctcaatagaa 5372526  T
Q  103 ct 104  Q
    ||    
T  5372527 ct 5372528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 14419439 - 14419526
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||| |||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| |||||||||||||||||||    
T  14419439 agtttttttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 14419526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 35872632 - 35872718
Alignment:
Q  7 gttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  35872632 gttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcc 35872718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 1225253 - 1225166
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| ||||||||| |||||||| ||  |||| |||||| |||||||||||||||||||  ||||||||||||||||||    
T  1225253 agttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagtaaaag 1225166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 5622986 - 5623077
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatc 92  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||  ||||||||| | ||||||||||||||||||||||    
T  5622986 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttattctgatacaaaacctatatttatagtaaaagaatc 5623077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18810795 - 18810708
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | ||||||||| ||||||||||||||||||||    
T  18810795 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaagatctatatttatagtaaaag 18810708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 26775284 - 26775123
Alignment:
Q  5 ttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag-aatcctcaataaaac 103  Q
    ||||||||||||||||||| |||||||| ||  |||| |||||| |||||| | |||||||||   |||||||||||||||||| || |||| ||||||     
T  26775284 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaagtaaccctc-ataaaat 26775186  T
Q  104 tggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 171  Q
    ||    ||||||| ||| ||  |||||||||||| |||| ||||| ||||||||||||||||||||||    
T  26775185 tg---taacaaatatagctc--aaaaatacgtttctgttctatttcctgctgtcaaaatcggccaccg 26775123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 27107387 - 27107456
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 296  Q
    ||||||||||||| ||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||    
T  27107387 tgaaaatcggccatcgattttcagcttccagaattctaatttcttcaattttgaggcactttcacaacaa 27107456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 13858732 - 13858824
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||||||||||||| |||||||| |   |||| |||||| |||||||| |||||||||  ||||||||||||||||||| ||||    
T  13858732 agttttgttgttgcctttctaaacccttgtttcatccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatcc 13858824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 26775046 - 26774978
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    ||||||||||||||||||||||  || |||||||| |||||| ||||||||||||||||||||||||||    
T  26775046 tgaaaatcggccaccgattttctgctaccagaattccaatttcttcaattttgaggcactttcacaaca 26774978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 30480751 - 30480843
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||||||||||||| |||||||| |   || | |||||| ||||||||||| ||||||| ||||||||||||||||||| ||||    
T  30480751 agttttgttgttgcctttctaaacccttgtttcaaccccttctatctcaaggtttacactaatacaatgtctatatttatagtaaaagcatcc 30480843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18812980 - 18812893
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||   ||| |||||||| |||| | ||||||||| ||||||||||||||||||||    
T  18812980 agttttgttgttgcctttctaaacccttgtttcagcctcctctatctccaagtttgctctgatacaagatctatatttatagtaaaag 18812893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36865625 - 36865538
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttaca-ctgatacaatatctatatttatagtaaaa 87  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||  ||||||||| |||||||||| ||||||||||||||||||    
T  36865625 agttttgttgttgcctttctaaacccttgtttcagccccctctatcttaaggtttacatctgatacaatgtctatatttatagtaaaa 36865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3886166 - 3886253
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  3886166 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaag 3886253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 4424105 - 4424018
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||||||||||||||||||||||| ||  |||| |||||| | |||| | |||||||||  ||| |||||||||||||||    
T  4424105 agttttgttgttgcctttctaaatccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctgtatttatagtaaaag 4424018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 14807838 - 14807751
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  14807838 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 14807751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15072797 - 15072710
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  15072797 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 15072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 27827073 - 27826986
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||   ||||||||||||||||||    
T  27827073 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaag 27826986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 27829384 - 27829297
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||   ||||||||||||||||||    
T  27829384 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaag 27829297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 27911101 - 27910992
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||| ||||||| |||||||| ||  |||| |||||| ||||||||| ||||||||| || |||||||| ||||||| |||  | ||||    
T  27911101 agttttgttgttgcc-ttctaaacccttgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagtatctcccataa 27911003  T
Q  101 aactggaacaa 111  Q
    || ||||||||    
T  27911002 aattggaacaa 27910992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 27957520 - 27957411
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||| ||||||| |||||||| ||  |||| |||||| ||||||||| ||||||||| || |||||||| ||||||| |||  | ||||    
T  27957520 agttttgttgttgcc-ttctaaacccttgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagtatctcccataa 27957422  T
Q  101 aactggaacaa 111  Q
    || ||||||||    
T  27957421 aattggaacaa 27957411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 21482394 - 21482301
Alignment:
Q  16 tttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 111  Q
    |||||||| |||||||| ||| | || |||||| | |||||| |||||||||  |||||||||||||||||||||||||  | |||||||||||||    
T  21482394 tttctaaacccttgtttcagtccactctatctcaaagtttactctgatacaaattctatatttatagtaaaagaatcct--aaaaaactggaacaa 21482301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 41382758 - 41382673
Alignment:
Q  3 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||| | ||||||| |||||||||||  || | |||||| |||||||| ||||| |||  |||||||||||||||||||    
T  41382758 ttttgttgttgtcattctaaacccttgttttagccccatctatctcaaggtttactctgattcaaggtctatatttatagtaaaag 41382673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37214458 - 37214517
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacact 60  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||||||    
T  37214458 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacact 37214517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44720930 - 44720843
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| |  ||||| ||  |||||||||||||||||||    
T  44720930 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctttgatataaggtctatatttatagtaaaag 44720843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 2468361 - 2468433
Alignment:
Q  16 tttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||| ||  |||| |||||| | ||||||  ||||||||  |||||||||||||||||||    
T  2468361 tttctaaatccttgtttcagctccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaag 2468433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 181624 - 181537
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||| |||||||| ||||||  |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  181624 agttttattgttgccattctaagcccttgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaag 181537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28251815 - 28251902
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| ||||||| |||||||| |   | || |||||| | ||||||  ||||||||  |||||||||||||||||||    
T  28251815 agttttgttgttgccattctaaacccttgtttcaacccactctatctcaaagtttactatgatacaaggtctatatttatagtaaaag 28251902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 15068067 - 15067981
Alignment:
Q  2 gttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||||||||||||| |||||||| ||  || | |||||| | |||||   ||||||||  | |||||||||||||||||    
T  15068067 gttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttaggttgatacaaggtttatatttatagtaaaag 15067981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 14419787 - 14419832
Alignment:
Q  43 tatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||| |||||||| |||||||||| ||||||||||||| |||||    
T  14419787 tatctcaaggtttaccctgatacaatgtctatatttatagcaaaag 14419832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 15186179 - 15186247
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    ||||||||| | |||||||||   |||||| |||| | |||| |||||||||||| |||||||||||||    
T  15186179 tgaaaatcgacgaccgattttttgcttccataattcctatttcttcaattttgagtcactttcacaaca 15186247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 5e-79; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 28137541 - 28137832
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||    |||||||||||||||||||||||||||||    
T  28137541 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaacgcatatatttatagtaaaagaatcctcaataa 28137640  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    |||||||||||   ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    | ||||||||| | | ||||||||     
T  28137641 aactggaacaa---atctaggcccgaaaa-tacgtttctgttttattttctgctgtcaaaatcggccaccgaatgctccaaatcggtcgctgatttttgc 28137736  T
Q  201 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 296  Q
     ||||||| | |||||||| ||||||  |||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||    
T  28137737 cgaaccaataaacaaaaaaccagagtgcaaaatcggccaccgattttctacttccagaattccaatttcttcaattttgaggcactttcacaacaa 28137832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 43421661 - 43421897
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| |   || | |||||| ||||||||||||||||||| |||||||||||||||||| | ||||||||||    
T  43421661 agttttgttgttgcctttctaaacccttgtttcaaccccttctatctcaaggtttacactgatacaatgtctatatttatagtaaaaaagtcctcaataa 43421760  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    |||||||||||   ||||||| || |||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||     
T  43421761 aactggaacaa---atctaggccc-aaaaatacgttc-tattttattttctgctgtcaaaatcggccaccgcgctcaccaaatcggccactgatttttgc 43421855  T
Q  201 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccg 242  Q
     |||||||||||||||||| ||||||  ||||||||||||||    
T  43421856 cgaaccaacagacaaaaaaacagagtccaaaatcggccaccg 43421897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 1626929 - 1627123
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  1626929 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcatcaataa 1627028  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 199  Q
    ||||||   ||||||||||||  || ||||||||||| ||||||||||| |||||||||| || |||||||    | ||||||||||||||||||||||    
T  1627029 aactgg---aacaaatctaggctcg-aaaatacgtttctgttttattttttgctgtcaaagtctgccaccgaatgctccaaatcggccaccgatttttg 1627123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 36011838 - 36011644
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||| ||||||| |||||||||||||||||| ||  |||| |||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  36011838 agtttcgttgttgtctttctaaatccttgtttcagccccctttatctcaaggtttacactaatacaatgtctatatttatagtaaaagaatcctcaataa 36011739  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 199  Q
    |||||||   ||||||||||| ||| ||||||||||| ||||||||||| || ||||||||||| |||||     | ||||||||||||||||||||||    
T  36011738 aactgga---acaaatctaggcccg-aaaatacgtttctgttttattttatgttgtcaaaatcgaccacctaatgctccaaatcggccaccgatttttg 36011644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 28100287 - 28100599
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    |||||||||||||| |||||||| |||||||| ||  |||| |||||| ||| |||| |||||||||    |||||||||||||||||||||||| ||||    
T  28100287 agttttgttgttgcttttctaaacccttgtttcagccccctctatctcaagggttactctgatacaacgcttatatttatagtaaaagaatcctctataa 28100386  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    |||||||||||   ||| ||| ||||||| ||||||  ||||||||||||||||||||||||||||||||     | ||||||||||| ||||||||||     
T  28100387 aactggaacaa---atccaggcccgaaaa-tacgttagtgttttattttctgctgtcaaaatcggccaccaaatgctccaaatcggccgccgatttttgc 28100482  T
Q  201 ggaaccaacagacaaaaaatcagagt---------------------tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttg 279  Q
     ||||||||  |||||||| ||||||                     ||||||||||||| |||||||| |||||||||||| |||||| ||||||||||    
T  28100483 cgaaccaacgaacaaaaaaccagagtgcaaaatcggccaccaatccctgaaaatcggccatcgattttctacttccagaattccaatttcttcaattttg 28100582  T
Q  280 aggcactttcacaacaa 296  Q
    |||||||||||||||||    
T  28100583 aggcactttcacaacaa 28100599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 43423709 - 43423877
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  |||| | |||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  43423709 agttttgttgttgcctttctaaacccttgtttcagccccctctttctcaaggtttacagtgatacaatgtctatatttatagtaaaagagtcctcaataa 43423808  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtc-aaaatcggccaccg 171  Q
    ||||||   |||||||||||| || |||||||||||| | ||||||||| ||||||| ||||||||||||||    
T  43423809 aactgg---aacaaatctaggcccaaaaaatacgtttctattttattttttgctgtcaaaaatcggccaccg 43423877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 53468702 - 53468867
Alignment:
Q  2 gttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaa 101  Q
    |||||||||||||| ||||||| |||||||| ||  |||| |||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  53468702 gttttgttgttgccattctaaacccttgtttcagccccctttatctaaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaa 53468801  T
Q  102 actggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 171  Q
    | |||   |||||||||||| ||| |||||| |||| |||||||||||||| ||| ||||||||||||||    
T  53468802 aatgg---aacaaatctaggcccg-aaaatatgtttctgttttattttctgttgttaaaatcggccaccg 53468867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 28102248 - 28102486
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| ||| |||| || ||||||    |||||||||||||||||||||||| ||||    
T  28102248 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaagggttactctaatacaacgcttatatttatagtaaaagaatcctctataa 28102347  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    ||||||   |||||||| ||| ||| ||||||||||  ||||||||||||||||||||||||||||||| |    | |||||||  |  |||||||||      
T  28102348 aactgg---aacaaatccaggcccg-aaaatacgttagtgttttattttctgctgtcaaaatcggccactgaatgctccaaatcaactgccgattttttc 28102443  T
Q  201 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccga 243  Q
     |||||||||||||||||| | ||||  |||||||||||||||    
T  28102444 cgaaccaacagacaaaaaacccgagtgcaaaatcggccaccga 28102486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 5927010 - 5927202
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    |||||||||||||| |||||||| |||||||| ||  | || |||||| |||||||||| |||||||| ||||||||||||||||||||||| |||||||    
T  5927010 agttttgttgttgcatttctaaacccttgtttcagccctctctatctcaaggtttacaccgatacaatgtctatatttatagtaaaagaatcttcaataa 5927109  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattt---tctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgat 194  Q
    |  |||   |||||||||||| ||| |||||| |||| ||||||||||     ||||  ||||||||||||||||||||||||||||||||| ||||    
T  5927110 acttgg---aacaaatctagg-ccgtaaaatatgtttttgttttatttcaccgtgctcacaaaatcggccaccgtgctcaccaaatcggccatcgat 5927202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 47701841 - 47701943
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  47701841 agttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataa 47701940  T
Q  101 aac 103  Q
    |||    
T  47701941 aac 47701943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 28181033 - 28180889
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||| ||||||||| |  | ||| ||  |||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28181033 agttttgttgttgtctttctaaacc--tatttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataa 28180936  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttct 151  Q
    |||||||   ||||||| ||| ||| ||||||||||| | |||||||||||    
T  28180935 aactgga---acaaatcgaggcccg-aaaatacgtttctattttattttct 28180889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 51 - 171
Target Start/End: Complemental strand, 4663880 - 4663764
Alignment:
Q  51 ggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttc 150  Q
    ||||||| |||||||||| ||||||||||||||||||||||| |||||||||||   | |||||||||| | ||  ||||||||||| ||||||||||||    
T  4663880 ggtttactctgatacaatgtctatatttatagtaaaagaatcttcaataaaact---agaacaaatctaag-cctgaaaatacgtttctgttttattttc 4663785  T
Q  151 tgctgtcaaaatcggccaccg 171  Q
    | |||| ||||||||||||||    
T  4663784 tactgtaaaaatcggccaccg 4663764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 54884168 - 54884058
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||  ||  |||| |||||| ||||||||| |||| |||| | ||||||||| |||||||||||||||||||    
T  54884168 agttttgttgttgcctttctaaacccttgttcgagctccctctatctcaaggtttacaatgatccaatgtttatatttatggtaaaagaatcctcaataa 54884069  T
Q  101 aactggaacaa 111  Q
    || ||||||||    
T  54884068 aattggaacaa 54884058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 3314695 - 3314603
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    |||||||||||| |||||||||| |||| ||| ||  |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  3314695 agttttgttgttacctttctaaacccttatttcagccccctctatctcaaggtttacactgatacaatatctatatttatagtaaaagcatcc 3314603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 23633455 - 23633257
Alignment:
Q  17 ttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaat 116  Q
    |||||||||||||||||||  | || |||||| |||||||| |||||||||  ||||||||||||||||||| ||||   |||||| |||   |||||||    
T  23633455 ttctaaatccttgttttagccctctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattgg---aacaaat 23633359  T
Q  117 ctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgtggaaccaacagacaaa 216  Q
    |||||  || ||||||||||| |||| |||||||||||| |||| |||| | |||   ||  | | |||||||||||||||||  |||||||||||| ||    
T  23633358 ctaggctcg-aaaatacgtttctgttatattttctgctggcaaattcggaccccgaattcctccattcggccaccgatttttgccgaaccaacagacgaa 23633260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 1627172 - 1627238
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaa 293  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  1627172 tgaaaatcggccaccgattttcagcttccagaattccaatttcttcaattttgaggcactttcacaa 1627238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3306810 - 3306724
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 87  Q
    |||||||||||||  |||||||| |||||||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  3306810 agttttgttgttgtatttctaaacccttgtttcagccccctatatctctaggtttacactgatacaatgtctatatttatagtaaaa 3306724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6231460 - 6231374
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 87  Q
    |||||||||||||||||||||||||||||||| ||  | || |||||| || |||||||||||||||| ||||||||||||||||||    
T  6231460 agttttgttgttgcctttctaaatccttgtttcagcccgctctatctcaagatttacactgatacaatgtctatatttatagtaaaa 6231374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 880698 - 880790
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||||| |||||||  ||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  880698 agttttgttgttgccattctaaactcttgtttcagacccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcc 880790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 51943382 - 51943295
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| | |||||| || ||||| ||||||||||||||| ||||| |||  |||||||||||||||||||    
T  51943382 agttttgttgttgcctttctaaacctttgtttcagcaccctctatctccaggtttactctgattcaaggtctatatttatagtaaaag 51943295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 36011596 - 36011526
Alignment:
Q  226 ttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 296  Q
    |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||||||||||||||||||    
T  36011596 ttgaaaattggccaccgattttcaccttccagatttccaatttcttcaattttgaggcactttcacaacaa 36011526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 890024 - 890109
Alignment:
Q  8 ttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    |||||||| ||||||| |||||||| ||   ||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  890024 ttgttgccattctaaacccttgtttcagcttcctctatctcaaggtttacactgatacaatatctatatttatagtaaaagcatcc 890109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3859539 - 3859452
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  3859539 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 3859452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5522861 - 5522948
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  5522861 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 5522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15780871 - 15780784
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| ||||||| |||||||| ||  |||| |||||||| |||||| |||||||||  |||||||||||||||||||    
T  15780871 agttttgttgttgccattctaaacccttgtttcagccccctctatctccaagtttactctgatacaaggtctatatttatagtaaaag 15780784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 43226097 - 43226010
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||| |||||||||||||| ||||    
T  43226097 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttatagtgaaag 43226010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 5927256 - 5927325
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 296  Q
    |||||||| |||||||||||||| |||||| |||| |||||| ||||||||| |||||||||||||||||    
T  5927256 tgaaaatcagccaccgattttcagcttccaaaattccaatttcttcaattttaaggcactttcacaacaa 5927325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6561821 - 6561740
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatag 82  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||  |||||||||||||    
T  6561821 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaggtctatatttatag 6561740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 7754131 - 7754063
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    ||||||||||||| ||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||    
T  7754131 tgaaaatcggccagcgatttttagcttccagaattccaatttcttcaattttgagccactttcacaaca 7754063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 11170415 - 11170328
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  11170415 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 11170328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26720559 - 26720472
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||| ||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  26720559 agttttgttgttgcctttctaaacccttatttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 26720472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 43228302 - 43228215
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||||||||||||||  ||||||| ||  |||| |||||||| |||| | |||||||||| |||||||||||||| ||||    
T  43228302 agttttgttgttgcctttctaaactcttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttatagtgaaag 43228215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 43423937 - 43424000
Alignment:
Q  232 atcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    ||||||||||| ||||| ||| |||||||| |||||| ||||||||||||||||||||||||||    
T  43423937 atcggccaccggttttctactaccagaattccaatttcttcaattttgaggcactttcacaaca 43424000  T

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Target: chr3; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 53591206 - 53591119
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| |||||||||  ||||||| ||   ||| |||||| ||||||||||| ||||||| |||||||||||||||||||    
T  53591206 agttttgttgttgtctttctaaactcttgtttcagcctcctctatctcaaggtttacacttatacaatgtctatatttatagtaaaag 53591119  T

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Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 10956273 - 10956359
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 87  Q
    ||||||||||||||| ||||||| |||||||| ||  |||| ||||| || |||||| |||||||||  ||||||||||||||||||    
T  10956273 agttttgttgttgccattctaaacccttgtttcagccccctctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 10956359  T

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Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 51675001 - 51675087
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 87  Q
    ||||||||||||| ||||||||| |||||||| ||  |||| |||||| | ||||||| ||||||||  ||||||||||||||||||    
T  51675001 agttttgttgttgtctttctaaacccttgtttcagccccctctatctcaacgtttacattgatacaacgtctatatttatagtaaaa 51675087  T

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Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 54691820 - 54691912
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcct 94  Q
    ||||||||||| ||||||||||| ||||||||||   |||| |||||  |||||||| |||||||||   ||||||||||||||||||||||||    
T  54691820 agttttgttgtcgcctttctaaaaccttgttttacc-ccctctatcttaaggtttactctgatacaaagcctatatttatagtaaaagaatcct 54691912  T

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Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 23637022 - 23636824
Alignment:
Q  17 ttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaat 116  Q
    ||||||| |||||||||||   ||| |||||| |||||||| |||||||||  | |||||||||| |||||  ||||   |||||| ||    |||||||    
T  23637022 ttctaaacccttgttttagcctcctctatctcaaggtttactctgatacaaagtatatatttatattaaaattatccctcataaaattg---aaacaaat 23636926  T
Q  117 ctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgtggaaccaacagacaaa 216  Q
    ||||| |||||||||| |||| |||| ||||||||||||  ||| |||| | |||   ||  | | |||||||||||||||||  |||||||||||||||    
T  23636925 ctagg-ccgaaaaatatgtttctgttatattttctgctggaaaattcgggccccgaattcctccattcggccaccgatttttgctgaaccaacagacaaa 23636827  T

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Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 28761674 - 28761766
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||| ||||||||| |||||||| |   |||| |||||| |||||||| ||||| |||  ||||||||||||||||||| ||||    
T  28761674 agttttgttgttgtctttctaaacccttgtttcaaccccctctatctcaaggtttactctgatgcaaagtctatatttatagtaaaagtatcc 28761766  T

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Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4308527 - 4308614
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  4308527 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 4308614  T

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Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5191664 - 5191577
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| |   |||||||  |||||||||||||||||||    
T  5191664 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgcttagatacaaggtctatatttatagtaaaag 5191577  T

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Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 11163161 - 11163074
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  ||||||||||| |||||||    
T  11163161 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatcgtaaaag 11163074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22114551 - 22114638
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||| ||||||||||||| |||||||| ||  || | |||||||| |||| | |||||||||  |||||||||||||||||||    
T  22114551 agttttgtttttgcctttctaaacccttgtttcagccccttctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 22114638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 35777432 - 35777345
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||||| |||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||| |||||||||||||||||||    
T  35777432 agttttgttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaag 35777345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 39715480 - 39715394
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||| |||||||| |||||| |||| ||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  39715480 agttttggtgttgcctctctaaacccttatttcagc-ccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaag 39715394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 45882950 - 45882863
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| ||||||   ||||||  ||||||||  |||||||||||||||||||    
T  45882950 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcatagtttactatgatacaaggtctatatttatagtaaaag 45882863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 51727252 - 51727339
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  51727252 agttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 51727339  T

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Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 10958569 - 10958655
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 87  Q
    ||||||||||||||| ||||||| |||||||| ||  |||| |||||  | |||||| |||||||||  ||||||||||||||||||    
T  10958569 agttttgttgttgccattctaaacccttgtttcagccccctctatctttatgtttactctgatacaaggtctatatttatagtaaaa 10958655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 12268214 - 12268299
Alignment:
Q  3 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||| |||||||||  ||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  12268214 ttttgttgttgtctttctaaactcttgtttcagctccctctatctcaaagtttactctgatacaagttctatatttatagtaaaag 12268299  T

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Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18162674 - 18162588
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacac-tgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| |   |||| |||||||| |||||| | ||||||||  |||||||||||||||||||    
T  18162674 agttttgttgttgcctttctaaacccttgtttca--tccctctatctccaagtttactcatgatacaaggtctatatttatagtaaaag 18162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 8183209 - 8183249
Alignment:
Q  255 cagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  8183209 cagaatttcaatttcttcaattttgaggcactttcacaaca 8183249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18097146 - 18097234
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctc-caggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| ||||||| |||||||| ||  |||| |||||| || ||||||  ||||||||  |||||||||||||||||||    
T  18097146 agttttgttgttgccattctaaacccttgtttgagccccctctatctctcaagtttactatgatacaaggtctatatttatagtaaaag 18097234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 1313420 - 1313334
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| || |||| |||||||| ||  |||| |||||| |||||||| ||||| |||  |||||||||||||||||||    
T  1313420 agttttgttgttgccattgtaaa-ccttgtttcagccccctctatctcaaggtttactctgattcaaggtctatatttatagtaaaag 1313334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24979718 - 24979631
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| ||||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  | |||||||||||| ||||    
T  24979718 agttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtatatatttatagtgaaag 24979631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 32264285 - 32264376
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccagg----tttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |    ||||| |||||||||  |||||||||||||||||||    
T  32264285 agttttgttgttgcctttctaaacccttgtttgagccccctctatctcaaagttaatttactctgatacaaggtctatatttatagtaaaag 32264376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 28102490 - 28102563
Alignment:
Q  226 ttgaaaatcggccaccgattttcaacttccagaatttcaatttt-ttcaattttgaggcactttcacaacaaaa 298  Q
    ||||||||| ||| |||||||||  ||| ||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  28102490 ttgaaaatcagcccccgattttctgctttcagaattccaaatttattcaattttgaggcactttcacaagaaaa 28102563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 1321441 - 1321365
Alignment:
Q  12 tgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  1321441 tgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaag 1321365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18099416 - 18099503
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctc-caggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| ||||||| |||||||| ||  |||| |||||| || |||||| |||||||||  |||||| ||||||||||||    
T  18099416 agttttgttgttgccattctaaacccttgtttcagccccctctatctctcaagtttactctgatacaaggtctata-ttatagtaaaag 18099503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 53597215 - 53597143
Alignment:
Q  38 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaaca 110  Q
    |||| |||||| |||||||| |||||||||  ||||||||||||||||||| ||||   |||||| |||||||    
T  53597215 ccctctatctcaaggtttactctgatacaaggtctatatttatagtaaaagtatccctcataaaattggaaca 53597143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 6484372 - 6484309
Alignment:
Q  25 ccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||| ||  |||| |||||| |||||||||||||||||||  |||||||||||| |||||    
T  6484372 ccttgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagcaaaag 6484309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 31151345 - 31151266
Alignment:
Q  16 tttctaaatccttgtttt-agtaccctatatctccaggtttaca-ctgatacaatatctatatttatagtaaaagaatcc 93  Q
    |||||||| ||||||||| ||  |||| |||||| ||||||||| |||||||||  ||||||||||||||||||| ||||    
T  31151345 tttctaaacccttgttttcagccccctctatctcgaggtttacatctgatacaaagtctatatttatagtaaaagcatcc 31151266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 35918195 - 35918282
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| |  ||| |  ||||||||  |||||||||||||| ||||    
T  35918195 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaaatttgctatgatacaaggtctatatttatagtgaaag 35918282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 43421933 - 43421972
Alignment:
Q  257 gaatttcaattttttcaattttgaggcactttcacaacaa 296  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  43421933 gaattccaatttcttcaattttgaggcactttcacaacaa 43421972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 47149141 - 47149233
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctcc----aggtttaca-ctgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||    |||  |||| |||||||||  |||||||||||||||||||    
T  47149141 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccctcaaggcctacatctgatacaaggtctatatttatagtaaaag 47149233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 48361917 - 48362003
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| | ||||||| |||||||| ||  |||| |||||| | ||||||  ||||||||  |||||||||||||||||||    
T  48361917 agttttgttgttgtcattctaaa-ccttgtttcagccccctgtatctcaaagtttactatgatacaaggtctatatttatagtaaaag 48362003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 53915742 - 53915829
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| | | ||||| |||||||| ||  |||| |||||  |||||||| ||||| |||  |||||||||||||||||||    
T  53915742 agttttgttgttgtcatcctaaacccttgtttcagccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaag 53915829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 562129 - 562195
Alignment:
Q  127 aaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccga 193  Q
    ||||||||||| |||||||||| ||||| ||||| |||||||||| |||  |||| | |||||||||    
T  562129 aaaatacgtttctgttttatttcctgctctcaaattcggccaccgagctatccaattgggccaccga 562195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 43423865 - 43423926
Alignment:
Q  180 aaatcggccaccgatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccg 242  Q
    ||||||||||||||||||||  |||| |||| |||||||| ||||||  ||||||||||||||    
T  43423865 aaatcggccaccgatttttgccgaactaacaaacaaaaaa-cagagtccaaaatcggccaccg 43423926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 1673927 - 1673826
Alignment:
Q  60 tgatacaatatctatatttatagtaaaagaat-cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtca 158  Q
    ||||||||  ||||||||||||||||||| || |||||| ||||||   | |||||||||| | ||| ||||||| ||| |||||||||||||| || ||    
T  1673927 tgatacaagttctatatttatagtaaaagtatccctcaa-aaaact---agaacaaatctaagcccg-aaaatacatttctgttttattttctggtggca 1673833  T
Q  159 aaatcgg 165  Q
    |||||||    
T  1673832 aaatcgg 1673826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 13420456 - 13420528
Alignment:
Q  39 cctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 111  Q
    |||||||||| |||||| |  |||||||| | |||||||||||||||||| |||||  |||||| || |||||    
T  13420456 cctatatctcaaggtttgctttgatacaaaacctatatttatagtaaaagtatccttcataaaattgaaacaa 13420528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32219106 - 32219026
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttata 81  Q
    |||||||||||||||||||| || |||||||| ||  |||| |||||| | |||||  | |||||||  ||||||||||||    
T  32219106 agttttgttgttgcctttctgaacccttgtttcagccccctctatctcaaagtttagtcagatacaaggtctatatttata 32219026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 1e-73; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 5 - 295
Target Start/End: Original strand, 22163199 - 22163485
Alignment:
Q  5 ttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaact 104  Q
    |||||||||||||||||||||||||||| ||  |||| |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22163199 ttgttgttgcctttctaaatccttgtttcagccccctctatctcaaagtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaaact 22163298  T
Q  105 ggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgtggaa 204  Q
    ||   |||||||||||| ||| ||||||| ||| |||||||||| ||||||||||||| ||||| |||||| ||||||||||||||||||   ||| |||    
T  22163299 gg---aacaaatctaggcccg-aaaatacatttctgttttatttcctgctgtcaaaattggccatcgtgcttaccaaatcggccaccgataaatgtcgaa 22163394  T
Q  205 ccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    |||  ||   ||| |  | || | ||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||    
T  22163395 ccagaagctcaaataaaacaggtcaaaatcggccaccgattttcagcttccagaattccaatttcttcaattttgaggcactttcacaaca 22163485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 3 - 295
Target Start/End: Original strand, 11739810 - 11740078
Alignment:
Q  3 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaa 102  Q
    ||||||||||| ||||||||| |||||||  ||  |||| |||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  11739810 ttttgttgttgtctttctaaacccttgttccagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagaatcctcaataaaa 11739909  T
Q  103 ctggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgtgg 202  Q
    ||||   |||||||||||   || ||||||||||| ||||||||||||||||||||||||||||||                     ||||||||||  |    
T  11739910 ctgg---aacaaatctagacacg-aaaatacgtttctgttttattttctgctgtcaaaatcggcca---------------------ccgatttttgccg 11739984  T
Q  203 aaccaacagac-aaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  11739985 aaccaacagacaaaaaaaacagagttgaaaatcggccaccgattttcaactttcagaattccaatttcttcaattttgaggcactttcacaaca 11740078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 3 - 243
Target Start/End: Original strand, 15539725 - 15539962
Alignment:
Q  3 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaa 102  Q
    ||||||||||| | ||||||| |||||||| |   ||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  15539725 ttttgttgttgtcattctaaacccttgtttcaaccccctatatctcaaggtttacactgatacaatgtctatatttatagtaaaacaatcctcaataaaa 15539824  T
Q  103 ctggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgtgg 202  Q
    ||||   |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||  |||   |||| ||||||| |||||| | |    
T  15539825 ctgg---aacaaatctaggcccg-aaaatacgtttctgttttattttctgctgtcaaaatcggccaccgaactccataaatgggccaccaatttttttcg 15539920  T
Q  203 aaccaacagac-aaaaaatcagagttgaaaatcggccaccga 243  Q
    ||||||| ||| |||||||||||||  |||||||||||||||    
T  15539921 aaccaactgacaaaaaaatcagagtgcaaaatcggccaccga 15539962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 38020150 - 38019986
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||  |   |||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  38020150 agttttgttgttgcctttctaaacccttgttccaaccccctctatctccaggtttacaccgatacaatgtctatatttatagtaaaaaaatcctcaataa 38020051  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccac 169  Q
    ||||||   || ||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  38020050 aactgg---aataaatctaggcccg-aaaatacgtttctgttttattttctactgtcaaaatcggccac 38019986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 3022170 - 3022006
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    |||||||||||||||||| |||| |||||||| ||   |||||||||| |||||||| |||||||||  |||||||||||||||| ||||||||||||||    
T  3022170 agttttgttgttgcctttataaacccttgtttcagcctcctatatctcaaggtttactctgatacaaagtctatatttatagtaagagaatcctcaataa 3022071  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccac 169  Q
    ||||    ||||||||||||| ||| ||||||||||| |||||||||| ||||| ||||||||||||||    
T  3022070 aact---ccaacaaatctaggcccg-aaaatacgtttctgttttatttcctgctatcaaaatcggccac 3022006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 34979827 - 34979993
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    |||||| ||||| ||||||||||  ||||||| ||  |||| |||||| ||||||||||| ||||||| ||||||||||| |  ||||||||||||||||    
T  34979827 agtttttttgttacctttctaaacgcttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatggccaaagaatcctcaataa 34979926  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 171  Q
    ||||||   |||||||||||| ||| || |||||||| |||||||||||||||||| ||||||||||||||    
T  34979927 aactgg---aacaaatctaggcccg-aagatacgtttctgttttattttctgctgtgaaaatcggccaccg 34979993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 14837280 - 14837087
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||| |||| | || |||||||| ||  |||| |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  14837280 agttttgttgttgtcttttttaacccttgtttcagctccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaagaatcctcaataa 14837181  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 199  Q
    ||||||   | |||||||| |  || ||||||||||| | |||| |||||||||||||||||||| | |||    | ||||||||||| ||||||||||    
T  14837180 aactgg---agcaaatctaagctcg-aaaatacgtttgt-tttttttttctgctgtcaaaatcggtctccgaatgctccaaatcggccgccgatttttg 14837087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 44289316 - 44289426
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||| ||||| | |||||||||| |||| ||| || |||||| |  |||||||| | ||||||||||||||||||||||||||||||    
T  44289316 agttttgttgttgccttcctaaacctttgttttagtcccctctatatcaaggtttgctatgatacaaaacctatatttatagtaaaagaatcctcaataa 44289415  T
Q  101 aactggaacaa 111  Q
    |||||||||||    
T  44289416 aactggaacaa 44289426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22407657 - 22407744
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| || ||||||||||||   |||||| |||||||||  |||||||||||||||||||    
T  22407657 agttttgttgttgcctttctaaacccttgtttcagcaccctatatctcacagtttactctgatacaaggtctatatttatagtaaaag 22407744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17849124 - 17849032
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||  ||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| | ||||||||||||||||| ||||    
T  17849124 agttttgttgttatctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtttatatttatagtaaaagcatcc 17849032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 13910292 - 13910379
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  13910292 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 13910379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19504593 - 19504680
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  19504593 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 19504680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40032306 - 40032393
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  40032306 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 40032393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 42064522 - 42064435
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  42064522 agttttgttgttgcctttctaaacccttgtttcagctccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 42064435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 42452790 - 42452703
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||| |||||||||||| ||||||    
T  42452790 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttataataaaag 42452703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 19007645 - 19007555
Alignment:
Q  3 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||  ||||||||   |||||||||||||||||||||||    
T  19007645 ttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactatgatacaaagcctatatttatagtaaaagaatcc 19007555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 3021907 - 3021839
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    |||||||||||||| ||||| |  ||||||||||| |||||| ||||||||||||||||||||||||||    
T  3021907 tgaaaatcggccacggatttcctgcttccagaattccaatttcttcaattttgaggcactttcacaaca 3021839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 31733013 - 31733105
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||| ||| |||||  ||||||||||||||||||| ||||    
T  31733013 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaatgtttactctgttacaaagtctatatttatagtaaaagcatcc 31733105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22287584 - 22287671
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  ||||||||||| | ||||||  | ||||||  |||||||||||||||||||    
T  22287584 agttttgttgttgcctttctaaacccttgtttcagccccctatatctcaaagtttactttaatacaaggtctatatttatagtaaaag 22287671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 24162460 - 24162547
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  24162460 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 24162547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 19502259 - 19502345
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 87  Q
    |||||||||||||||||||||||  ||||||| ||  |||| |||||||| |||| | |||||||||  ||||||||||||||||||    
T  19502259 agttttgttgttgcctttctaaactcttgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaa 19502345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 14837032 - 14836971
Alignment:
Q  234 cggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    |||||||| ||||||| |||||||||||  ||||| ||||||||||||||||||||||||||    
T  14837032 cggccaccaattttcagcttccagaattctaatttcttcaattttgaggcactttcacaaca 14836971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 18800565 - 18800637
Alignment:
Q  16 tttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||| |||||||| ||  ||||||||||||| |||||| |||||||||  |||||||||||||||||||    
T  18800565 tttctaaacccttgtttcagccccctatatctccatgtttaccctgatacaaggtctatatttatagtaaaag 18800637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28196644 - 28196552
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||||||||||||| | |||||| ||  |||| |||||| | |||||| |||||||||    ||||||||||||||||||||||    
T  28196644 agttttgttgttgcctttctaaacctttgtttcagccccctctatctcaatgtttactctgatacaaagcatatatttatagtaaaagaatcc 28196552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 34980072 - 34980136
Alignment:
Q  229 aaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaa 293  Q
    ||||||||||||||||||||| |||| ||||||  ||||| ||||||||||||||| ||||||||    
T  34980072 aaaatcggccaccgattttcagcttctagaattctaatttcttcaattttgaggcattttcacaa 34980136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 27104806 - 27104719
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||||||||||| || |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  27104806 agttttgttgttgcctttctgaacccttgtttcagccccctctatctcaaagttttctctgatacaaggtctatatttatagtaaaag 27104719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 38019996 - 38019933
Alignment:
Q  180 aaatcggccaccgatttttgtggaaccaacagacaa-aaaatcagagttgaaaatcggccaccg 242  Q
    ||||||||||| ||||||||  |||||||||||||| |||| ||||||||||||||||||||||    
T  38019996 aaatcggccactgatttttgctgaaccaacagacaaaaaaagcagagttgaaaatcggccaccg 38019933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 15539991 - 15540036
Alignment:
Q  251 cttccagaatttcaattttttcaattttgaggcactttcacaacaa 296  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||    
T  15539991 cttccagaattccaatttcttcaattttgaggcactttcacaacaa 15540036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 6264396 - 6264479
Alignment:
Q  4 tttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 87  Q
    |||||||||||||||||||| | |||||| ||  |||| |||||| | |||||  |||||||||  ||||||||||||||||||    
T  6264396 tttgttgttgcctttctaaacctttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaa 6264479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 37963190 - 37963285
Alignment:
Q  16 tttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 111  Q
    |||||||| |||||||| ||  |||| |||||| |||||||| || ||||||  ||||||||||||||||||| ||||   |||||| ||||||||    
T  37963190 tttctaaacccttgtttcagccccctctatctcaaggtttactcttatacaaagtctatatttatagtaaaagtatccatcataaaattggaacaa 37963285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 43623816 - 43623903
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| | |||||| |   |||| |||||||  |||||| |||||||||  ||||| |||||||||||||    
T  43623816 agttttgttgttgcctttctaaaccattgtttcacccccctctatctcccagtttactctgatacaaggtctatttttatagtaaaag 43623903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 12342695 - 12342767
Alignment:
Q  38 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 111  Q
    |||| |||||| |||||||| |||||||||| | ||||||||||||||||| ||||| || |||| ||||||||    
T  12342695 ccctctatctcaaggtttactctgatacaatgtgtatatttatagtaaaagtatcct-aaaaaaattggaacaa 12342767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17848450 - 17848360
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||| ||||||||| ||| |||| ||  |||| |||||| ||| ||||  ||||||||   |||||||||||||||||||||||    
T  17848450 agttttgttgttgtctttctaaaccctcgtttgagccccctctatctcaaggattac--tgatacaaagcctatatttatagtaaaagaatcc 17848360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 5377677 - 5377724
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctc 48  Q
    ||||||||||||||||||||||| |||||||| ||| |||| ||||||    
T  5377677 agttttgttgttgcctttctaaacccttgtttcagtcccctctatctc 5377724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21520941 - 21521030
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtacc--ctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  ||  |||| |||| | |||||  |||||||||  | |||||||||||||||||    
T  21520941 agttttgttgttgcctttctaaacccttgtttcagccccatctatctctcaaagtttagtctgatacaaggtttatatttatagtaaaag 21521030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 42923757 - 42923846
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttag--taccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| ||||||| |||||||| ||  | | |||| |||| ||||||||  |||| |||  |||||||||||||||||||    
T  42923757 agttttgttgttgccattctaaacccttgtttcagcctcctctatctctcaaggtttactatgattcaaggtctatatttatagtaaaag 42923846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 17897548 - 17897601
Alignment:
Q  59 ctgatacaatatctatatttatagtaaaagaat-cctcaataaaactggaacaa 111  Q
    |||||||||  ||||||||||||||||||| || |||||| |||||||||||||    
T  17897548 ctgatacaaggtctatatttatagtaaaagtatccctcaaaaaaactggaacaa 17897601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 35028538 - 35028494
Alignment:
Q  50 aggtttaca-ctgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||    
T  35028538 aggtttacatctgatacaatgtctatatttatagtaaaagtatcc 35028494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 6e-69; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 13039820 - 13039582
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||| ||||||||||||| |||||||| ||   |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13039820 agttttgttcttgcctttctaaacccttgtttcagcctcctatatctcaaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 13039721  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    |||||||   ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||  |||   ||| ||||||||||||||||     
T  13039720 aactgga---acaaatctaggtccg-aaaatacgtttatgttttattttctgttgtcaaaatcggccatcgaactccataaaccggccaccgatttttgc 13039625  T
Q  201 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccga 243  Q
      |||||||| |||||||| ||||||  |||||||||||||||    
T  13039624 caaaccaacaaacaaaaaaccagagtgcaaaatcggccaccga 13039582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 3630112 - 3630423
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |  ||||| ||  |||| |||||| || |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  3630112 agttttgttgttgcctttctaaaccgatgtttcagccccctctatctcaagttttacattgatacaatgtctatatttatagtaaaagaatcctcaataa 3630211  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    ||||||   |||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||     
T  3630212 aactgg---aacaaatctagg-cccaaaaatacgtttctgttttattttctgctgtcaaaatcgaccaccgtgctcaccaaatcggccaccga-ttttgc 3630306  T
Q  201 ggaaccaacagacaaaaaatcagagt---------------------tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttg 279  Q
     ||||||||| |||||||| ||||||                     ||||||||||||||||||||||| |||| |||||| |||||| ||||||||||    
T  3630307 cgaaccaacaaacaaaaaaacagagtccaaaatcggccacaatgctctgaaaatcggccaccgattttcagcttctagaattccaatttcttcaattttg 3630406  T
Q  280 aggcactttcacaacaa 296  Q
    |||||||||||||||||    
T  3630407 aggcactttcacaacaa 3630423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 25477340 - 25477103
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  25477340 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaagaatcctcaataa 25477241  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    |||||||   ||||||||||| ||| |||||| |||| |||||||||||||| ||||||||||||||||||  |||   |||||||||||| |||||||     
T  25477240 aactgga---acaaatctaggcccg-aaaatatgtttctgttttattttctgatgtcaaaatcggccaccgaactccataaatcggccaccaatttttgc 25477145  T
Q  201 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccg 242  Q
     |||||||||||||||||| ||||||  ||||||| ||||||    
T  25477144 cgaaccaacagacaaaaaaccagagtgtaaaatcgaccaccg 25477103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 3632186 - 3632420
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| |   |||| |||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  3632186 agttttgttgttgcctttctaaacccttgtttcaactccctctatctcaaggtttacactgatacaatgtctatatttatagtaaacgaatcctcaataa 3632285  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    ||||||   |||||||||||| ||| ||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||      
T  3632286 aactgg---aacaaatctaggcccg-aaaatacgtttctattttattttctgctgtcaaaatcggtcaccgtgctcaccaaatcggccactgattttt-c 3632380  T
Q  201 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccg 242  Q
     ||||||||  | |||||| ||||||  ||||||||||||||    
T  3632381 cgaaccaac--aaaaaaaaacagagtccaaaatcggccaccg 3632420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 13057260 - 13057022
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||| ||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13057260 agttttgttcttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataa 13057161  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    || |||   |||||||||||| ||| ||||||||||| ||||||||||||| || ||||||| ||||| ||   ||   ||||||||||||||||||||     
T  13057160 aattgg---aacaaatctaggcccg-aaaatacgtttctgttttattttctactatcaaaattggccatcgaaatccataaatcggccaccgatttttgc 13057065  T
Q  201 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccga 243  Q
     |||||||||||||||||| ||||||  |||||||||||||||    
T  13057064 cgaaccaacagacaaaaaaccagagtgcaaaatcggccaccga 13057022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 24338696 - 24338890
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  24338696 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcttcaataa 24338795  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 199  Q
    ||||||   |||||||||||| ||| ||||||||||||||||||||||| || ||||||||||||||||||    | ||||||||||||||||||||||    
T  24338796 aactgg---aacaaatctaggcccg-aaaatacgtttatgttttattttttggtgtcaaaatcggccaccgaatgctccaaatcggccaccgatttttg 24338890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 12161803 - 12161996
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    |||||||||||||| |||||||| |||||||| ||  |||| |||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  12161803 agttttgttgttgcatttctaaacccttgtttcagc-ccctttatctcaaggtttacaatgatacaatgtctatatttaaagtaaaagaatcctcaataa 12161901  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 199  Q
    ||||||   |||||||||||| ||| |||||| |||| ||||||||||||||||||||||||| | |||| |||||||||||| |||||||||||||||    
T  12161902 aactgg---aacaaatctaggcccg-aaaatatgtttctgttttattttctgctgtcaaaatcagtcaccatgctcaccaaattggccaccgatttttg 12161996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 10584187 - 10584026
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    |||||||||||||| ||| |||| | ||||||     |||| |||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  10584187 agttttgttgttgcttttataaacctttgttt-----ccctctatctcaaggtttacactgatacaatgtttatatttatagtaaaagaatcctcaataa 10584093  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 171  Q
    |||||||   ||||||||||| ||| |||||| |||  |||||||||||||||||||||||||||||||||    
T  10584092 aactgga---acaaatctaggcccg-aaaatatgttactgttttattttctgctgtcaaaatcggccaccg 10584026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 22490706 - 22490539
Alignment:
Q  1 agttttgttgttgcctttctaaatcc-ttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 99  Q
    ||||||||||||||||||| ||| || |||||| ||  |||| |||||| ||||||||||| || |||| ||||||||||| ||||||||||||||||||    
T  22490706 agttttgttgttgcctttcaaaaacccttgtttcagccccctctatctcaaggtttacactaattcaatgtctatatttatggtaaaagaatcctcaata 22490607  T
Q  100 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 171  Q
    ||||||||   ||||||||||  ||| ||||||||||| |||||||||||||||| |||||||| |||||||    
T  22490606 aaactgga---acaaatctagacccg-aaaatacgtttctgttttattttctgctatcaaaatcagccaccg 22490539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 13870670 - 13870835
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||| ||| ||  |||| |||||| |||||| | |||||||||   |||||||||||  |||||||||||||||||    
T  13870670 agttttgttgttgcctttctaaacccttatttcagc-ccctctatctcaaggtttgctctgatacaaagcctatatttatataaaaagaatcctcaataa 13870768  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 171  Q
    ||||||   |||||||||||| ||| ||||||||||| | |||||||| ||||||||||||||||||||||    
T  13870769 aactgg---aacaaatctaggcccg-aaaatacgtttctattttatttcctgctgtcaaaatcggccaccg 13870835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 20220135 - 20220000
Alignment:
Q  60 tgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaa 159  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||||   ||||||||||  ||| |||||| |||| |||||||||||||||||||||    
T  20220135 tgatacaatgtctatatttatagtaaaggaatcatcaataaaactgga---acaaatctagacccg-aaaatatgtttttgttttattttctgctgtcaa 20220040  T
Q  160 aatcggccaccgtgctcaccaaatcggccaccgatttttg 199  Q
    |||||||||| |    | |||||||||||| |||||||||    
T  20220039 aatcggccacggaatgctccaaatcggccatcgatttttg 20220000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 24338960 - 24339028
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  24338960 tgaaaatcggccaccgattttcatcttccagaatttcaatttcttcaattttgaggcactttcacaaca 24339028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 169
Target Start/End: Complemental strand, 22114119 - 22114014
Alignment:
Q  60 tgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaa 159  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||||   ||||||||||  ||| |||||| |||| |||||||||||||||||||||    
T  22114119 tgatacaatgtctatatttatagtaaaggaatcatcaataaaactgga---acaaatctagacccg-aaaatatgtttttgttttattttctgctgtcaa 22114024  T
Q  160 aatcggccac 169  Q
    ||||||||||    
T  22114023 aatcggccac 22114014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 13039577 - 13039509
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    |||||||||||||||| |||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  13039577 tgaaaatcggccaccggttttctgcttccagaatttcaatttcttcaattttgaggcactttcacaaca 13039509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 32447564 - 32447656
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||   |||||||||||||||||||||||    
T  32447564 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttatagtaaaagaatcc 32447656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3390445 - 3390358
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  || | |||||| ||||||| ||||||||||| |||||||||||||||||||    
T  3390445 agttttgttgttgcctttctaaacccttgtttcagccccgtctatctcaaggtttatactgatacaatgtctatatttatagtaaaag 3390358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8995545 - 8995458
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||||||  |||| ||||||   |||||| ||||||||| ||||||||||||||||||||    
T  8995545 agttttgttgttgcctttctaaacccttgttttagccccctctatctctcagtttactctgatacaagatctatatttatagtaaaag 8995458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 9019992 - 9019905
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||||||  |||| ||||||   |||||| ||||||||| ||||||||||||||||||||    
T  9019992 agttttgttgttgcctttctaaacccttgttttagccccctctatctctcagtttactctgatacaagatctatatttatagtaaaag 9019905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 3233979 - 3234071
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcct 94  Q
    ||||||||||||| |||||||||||||||||| ||  |||| |||||  ||||||||||||||||||  ||||||||||||||||||| |||||    
T  3233979 agttttgttgttgtctttctaaatccttgtttcagccccctctatcttaaggtttacactgatacaa-gtctatatttatagtaaaagcatcct 3234071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 226 - 295
Target Start/End: Original strand, 3632425 - 3632494
Alignment:
Q  226 ttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    ||||||||||| || ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||    
T  3632425 ttgaaaatcgggcatcgattttcagcttccagaattccaatttcttcaattttgaggcactttcacaaca 3632494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 14466399 - 14466237
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||| ||||| |||||||||  ||||||| |   | || |||||| |||||||  || ||||||  ||||||| |||||||||||||||||||||||    
T  14466399 agttttgctgttgtctttctaaactcttgtttcaaccctctctatctcaaggtttattctaatacaaagtctatatctatagtaaaagaatcctcaataa 14466300  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggcca 168  Q
    |||||||   ||||||||||| ||| |||| |||||| |||||||||| |||||||| ||||| ||||    
T  14466299 aactgga---acaaatctagg-ccg-aaaagacgtttctgttttatttcctgctgtcgaaatcagcca 14466237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 13057017 - 13056949
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    ||||||||||||||| ||||||  ||||||||||| |||||| ||||||||||||||||||||||||||    
T  13057017 tgaaaatcggccaccaattttctgcttccagaattccaatttcttcaattttgaggcactttcacaaca 13056949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1072125 - 1072212
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  || | |||||| | |||||| |||||||||| |||||||||||||||||||    
T  1072125 agttttgttgttgcctttctaaacccttgtttcagctccttctatctcaaagtttactctgatacaatgtctatatttatagtaaaag 1072212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19227656 - 19227743
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | ||||||||| ||||||||||||||||||||    
T  19227656 agttttgttgttgcctttctaaacccttgtttgagccccctttatctcaaagtttgctctgatacaagatctatatttatagtaaaag 19227743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 14507423 - 14507510
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||||||  |||| |||||| | |||| | || ||||||  |||||||||||||||||||    
T  14507423 agttttgttgttgcctttctaaacccttgttttagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaag 14507510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 30729076 - 30729163
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| ||||| | | |||||||| ||  |||| |||||| |||||||| ||||||||| ||||||||||||||||||||    
T  30729076 agttttgttgttgtctttcgatacccttgtttcagccccctctatctcaaggtttactctgatacaagatctatatttatagtaaaag 30729163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 297
Target Start/End: Original strand, 13870841 - 13870911
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaaa 297  Q
    ||||||||| ||||||||||||  |||||| |||| |||||| ||||||||| ||||||||||||||||||    
T  13870841 tgaaaatcgaccaccgattttctgcttccaaaattccaatttcttcaattttaaggcactttcacaacaaa 13870911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 51 - 171
Target Start/End: Original strand, 3028148 - 3028265
Alignment:
Q  51 ggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttc 150  Q
    |||||||  ||||||||  ||||||||||||||||||| ||| | || ||||||| |||||||| ||||||  |||||| |||||||||||||||| | |    
T  3028148 ggtttactttgatacaaggtctatatttatagtaaaagtatcataaa-aaaactgaaacaacaa-tctaggctcgaaaa-tacgtttatgttttatatcc 3028244  T
Q  151 tgctgtcaaaatcggccaccg 171  Q
    |||||||||| || |||||||    
T  3028245 tgctgtcaaattcagccaccg 3028265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 15346441 - 15346365
Alignment:
Q  17 ttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||| ||||| || ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  15346441 ttctaaacccttggttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagtatcc 15346365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 22490483 - 22490415
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    ||||||||||||| ||||||||| ||| |||||||  ||||| ||||||||||||||||||||| ||||    
T  22490483 tgaaaatcggccatcgattttcagctttcagaattctaatttcttcaattttgaggcactttcataaca 22490415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 11983277 - 11983364
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||  | |||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  11983277 agttttgttgttgcctttctaagcctttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 11983364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 15532929 - 15533016
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||| |||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  15532929 agttttgttgttacctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 15533016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 15541388 - 15541475
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||| ||||||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  15541388 agttttgtttttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 15541475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17852608 - 17852521
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| | ||||||| |||||||| ||  |||| |||||| |||||||| ||||| |||  |||||||||||||||||||    
T  17852608 agttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaag 17852521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28241569 - 28241656
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  28241569 agttttgttgttgcctttctaaacccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaag 28241656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 10583950 - 10583884
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaa 293  Q
    ||||||| | |||||| |||||| ||||||||||| |||||| ||||||||| ||||||||||||||    
T  10583950 tgaaaatggaccaccggttttcagcttccagaattccaatttcttcaattttaaggcactttcacaa 10583884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12195763 - 12195850
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||||| |||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  12195763 agttttgttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 12195850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 15530370 - 15530457
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| ||||||  ||||| || ||  |||| |||||||  |||||| |||||||||  |||||||||||||||||||    
T  15530370 agttttgttgttgccattctaagcccttgcttcagccccctctatctcccagtttactctgatacaaggtctatatttatagtaaaag 15530457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 171
Target Start/End: Original strand, 25466467 - 25466583
Alignment:
Q  50 aggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttatttt 149  Q
    |||||||| |||| | || |||||||||||||||||||| |||||| | | ||||||   |||||||||  | ||| |||||||||||||||||||||||    
T  25466467 aggtttactctgacaaaagatctatatttatagtaaaagtatcctcga-agaactgg---aacaaatctgagcccg-aaaatacgtttatgttttatttt 25466561  T
Q  150 ctgctgtcaaaatcggccaccg 171  Q
    |||||   ||||||||| ||||    
T  25466562 ctgctagtaaaatcggcaaccg 25466583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14459013 - 14459093
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttata 81  Q
    ||||||||||||||||||||||| |||| ||| ||  |||| |||||| | |||| | |||||||||  ||||||||||||    
T  14459013 agttttgttgttgcctttctaaacccttatttcagccccctctatctcaaagtttgctctgatacaaggtctatatttata 14459093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 30034853 - 30034942
Alignment:
Q  3 ttttgttgttgcctttctaaatccttgttttagtaccctatatctc----caggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||| |||||||||||  |||| ||||||     | |||||  |||||||||  |||||||||||||||||||    
T  30034853 ttttgttgttgcctttctaaacccttgttttagctccctctatctctcttaaagtttagcctgatacaaggtctatatttatagtaaaag 30034942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 20219980 - 20219938
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaatttt 269  Q
    ||||||||||||||||||||||| |||||| |||| |||||||    
T  20219980 tgaaaatcggccaccgattttcagcttccataattccaatttt 20219938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 14466197 - 14466136
Alignment:
Q  229 aaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttca 290  Q
    ||||| ||||| | |||||| ||||| ||||||||||||| |||||||||||| || |||||    
T  14466197 aaaattggccatcaattttctacttctagaatttcaatttcttcaattttgagtcagtttca 14466136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 11138325 - 11138277
Alignment:
Q  45 tctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||| ||||||||| || ||||| ||||||||||| ||||    
T  11138325 tctccaggtttactctgatacaagatttatatctatagtaaaagtatcc 11138277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 32280059 - 32279976
Alignment:
Q  4 tttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| |||| |||||||| ||  |||| |||||||| ||||||  ||||||||  ||||||| ||||| |||||    
T  32280059 tttgttgttgcctttttaaacccttgtttcag-cccctctatctccaagtttactatgatacaaggtctatatatataggaaaag 32279976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 6e-66; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 25251525 - 25251814
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||| ||||||||| | |||||| ||  |||| |||||| |||||||| |||||||||  |||||||||||||||||| |||| |||||||    
T  25251525 agttttgttgttgtctttctaaacctttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaaaaatcttcaataa 25251624  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    ||||||   |||||||||||| ||| ||||||||||| | |||||| ||||||||| |||||||||||||     | |||||| |||||||||||||||     
T  25251625 aactgg---aacaaatctaggcccg-aaaatacgtttcttttttatattctgctgttaaaatcggccaccaaatgctccaaattggccaccgatttttgc 25251720  T
Q  201 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaac 294  Q
     |||||||||||||||||| |||   | ||||||||||||||||||||  ||||||||||| |||||| |||||||||||||||||||||||||    
T  25251721 cgaaccaacagacaaaaaaacagcactcaaaatcggccaccgattttctgcttccagaattccaatttcttcaattttgaggcactttcacaac 25251814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 25248764 - 25249055
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||  ||||||||| ||| |||| ||||||||||||    
T  25248764 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttctagaaaaaaaatcctcaataa 25248863  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    |||| ||||||   ||||||| ||||||  || |||| |||||||||| ||||||  ||||||||| ||||    | |||||||||||||| |||||||     
T  25248864 aacttgaacaa---atctaggcccgaaag-tatgtttctgttttatttcctgctgcaaaaatcggctaccgaatgctccaaatcggccaccaatttttgc 25248959  T
Q  201 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 296  Q
     |||||||| ||||||||| |||   | ||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||| |||||||||    
T  25248960 cgaaccaactgacaaaaaaacagtactcaaaatcggccaccgattttctgcttccagaattccaatttcttcaattttgaggcactatcacaacaa 25249055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 18839618 - 18839382
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    |||||||||||||||| |||||| |||||||| ||  |||| ||||||  |||||||| | ||||||| |||||||||||||||||||||||||||||||    
T  18839618 agttttgttgttgcctatctaaacccttgtttcagccccctctatctcatggtttacaataatacaatgtctatatttatagtaaaagaatcctcaataa 18839519  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    ||||   | |||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||    | ||||||||||||||||||||||     
T  18839518 aact---ataacaaatctaggcccg-aaaatacgtttctgtttaattttctgctgtcaaaatcggccaccgaatgctccaaatcggccaccgatttttgc 18839423  T
Q  201 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccg 242  Q
     |||||||||| ||||||| ||||||  ||||||||||||||    
T  18839422 cgaaccaacaggcaaaaaa-cagagtccaaaatcggccaccg 18839382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 50248822 - 50249016
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||| |||| |||| | |||||| ||  |||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  50248822 agttttgttgttgtctttttaaacctttgtttcagctccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataa 50248921  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 199  Q
    ||||||   |||||||||||| |||  ||||| |||| ||||||| |||||||||||||||||||||||||    | ||||||||||||||||||||||    
T  50248922 aactgg---aacaaatctaggcccg-taaatatgtttctgttttaatttctgctgtcaaaatcggccaccgaatgctccaaatcggccaccgatttttg 50249016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 31489946 - 31489784
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    |||||||||||| |||||||||| |||||||| |   |||| |||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  31489946 agttttgttgttacctttctaaacccttgtttcaaccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagaatcctcaataa 31489847  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggcc 167  Q
    ||||   | |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||    
T  31489846 aact---agaacaaatctaggcccg-aaaatacgtttctgttttattttctgctgtcaaaatcggcc 31489784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 17324096 - 17323858
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||| |||||||| || |||||||||||  | || |||||| |||||||| || ||||||  |||||||||||| ||||||||||||||||||    
T  17324096 agttttgttgtggcctttctgaacccttgttttagccctctctatctcaaggtttactctaatacaaagtctatatttataataaaagaatcctcaataa 17323997  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    |||||||||||   || ||||  |||||  ||||||| ||||||| |||||||||||||||| ||||||||  |||   ||| ||| ||||||||||||     
T  17323996 aactggaacaa---atttaggcacgaaag-tacgtttctgttttaatttctgctgtcaaaattggccaccgaactccataaaccggtcaccgatttttgc 17323901  T
Q  201 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccga 243  Q
     |||||||||||||||||| |||||   |||||||||||||||    
T  17323900 cgaaccaacagacaaaaaaccagagcataaaatcggccaccga 17323858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 17186378 - 17186542
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||| ||| ||  |||| |||||| |||||| | ||||||||| ||||||||||||| ||||||||||||||||||    
T  17186378 agttttgttgttgcctttctaaacccttatttcagccccctctatctcaaggtttgctctgatacaaaatctatatttatattaaaagaatcctcaataa 17186477  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccac 169  Q
    ||||||   ||||||| ||||||| |||||||||||| | |||||||| ||||||||||||||||||||    
T  17186478 aactgg---aacaaatttaggtcc-aaaaatacgtttcttttttatttcctgctgtcaaaatcggccac 17186542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 18307140 - 18307054
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 87  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||| ||||    
T  18307140 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaa 18307054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 31423124 - 31423234
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||||||||||||||   ||||||||||||||||| |||  | ||||    
T  31423124 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgcttatatttatagtaaaagtatctcccataa 31423223  T
Q  101 aactggaacaa 111  Q
    || ||||||||    
T  31423224 aattggaacaa 31423234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 11457725 - 11457817
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||| ||||||||| | |||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  11457725 agttttgttgttgtctttctaaaccattgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcc 11457817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 17323853 - 17323785
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    |||||||||| ||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  17323853 tgaaaatcggtcaccgattttctacttccagaattccaatttcttcaattttgaggcactttcacaaca 17323785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 50076922 - 50077014
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||| |||||||||||||||||| ||  |  | |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  50076922 agttttgttgttgtctttctaaatccttgtttcagccctttctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcc 50077014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17318924 - 17318832
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||  |||||||| | ||||||||||||||||| |||||    
T  17318924 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactatgatacaaaacctatatttatagtaaaaaaatcc 17318832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 50079071 - 50079163
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    |||||||||| || ||||||||| |||||||| ||  |||| |||||| ||||||||||| ||||||| ||||||||||||||||||| ||||    
T  50079071 agttttgttgctgtctttctaaacccttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagcatcc 50079163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6756558 - 6756471
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||  |||||||| ||| |||| ||| || |||||||||| |||||||| ||||||||||||| |||||    
T  6756558 agttttgttgttgcctttctaagcccttgtttcagtcccctctatttcaaggtttacaccgatacaatgtctatatttatagcaaaag 6756471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 50249065 - 50249136
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaaaa 298  Q
    |||||||| ||  |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||    
T  50249065 tgaaaatcagcggccgattttcagcttccagaattccaatttcttcaattttgaggcactttcacaacaaaa 50249136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 51750070 - 51749983
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  51750070 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 51749983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13215112 - 13215025
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| |  ||||| |||||||||  |||||||||||||||||||    
T  13215112 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaaatttactctgatacaaggtctatatttatagtaaaag 13215025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15823577 - 15823490
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | ||||||  ||||||||  |||||||||||||||||||    
T  15823577 agttttgttgttgcctttctaaacccttgtttcagccccctttatctctaagtttactttgatacaaggtctatatttatagtaaaag 15823490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 17324886 - 17324973
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| ||||||| |||||||||||  |||| ||||| ||||||||| ||| | |||  |||||||||||||||||||    
T  17324886 agttttgttgttgccattctaaacccttgttttagccccctgtatcttcaggtttactctggttcaaggtctatatttatagtaaaag 17324973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41646951 - 41646864
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||| ||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  41646951 agttttgttgttgcctttctaaacccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 41646864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 297
Target Start/End: Original strand, 17186620 - 17186690
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaaa 297  Q
    |||||||| |||||||||||||  |||||||| ||||||||| |||||||||||| | |||||||||||||    
T  17186620 tgaaaatcagccaccgattttctgcttccagattttcaatttcttcaattttgagtcgctttcacaacaaa 17186690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13761868 - 13761781
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||| |||||||||||||||||| |||||||| ||  | || |||||||| |||| | |||||||||  |||||||||||||||||||    
T  13761868 agttatgttgttgcctttctaaacccttgtttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 13761781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16226198 - 16226111
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||||| |||||||| |||||||||||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  16226198 agttttgttgttgcttttctaaacccttgttttagacccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 16226111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20302490 - 20302403
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||| ||||||    
T  20302490 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttataataaaag 20302403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28207316 - 28207403
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| ||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  28207316 agttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 28207403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 38925728 - 38925815
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||||||||||| ||  ||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  38925728 agttttgttgttgcctttctgaactcttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 38925815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 47451679 - 47451592
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| ||| ||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  47451679 agttttgttgttgccattccaaacccttgtttaagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 47451592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31425269 - 31425335
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaa 67  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||| ||||||||    
T  31425269 agttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaggtttacattgatacaa 31425335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 51752394 - 51752309
Alignment:
Q  3 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||| ||||||||||  ||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  51752394 ttttgttgttacctttctaaactcttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 51752309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 16428684 - 16428592
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||   ||||| | |||||| || | |||||||||||||||||| ||||    
T  16428684 agttttgttgttgcctttctaaacccttgtttcagccccctctatctaatggtttgctctgatataaaacctatatttatagtaaaagtatcc 16428592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 50307797 - 50307889
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||| ||||||||||||| |||| ||| ||  || |||||||| ||||||||  ||||||||    ||||||||||||||||||||||    
T  50307797 agttttgttattgcctttctaaacccttttttcagccccatatatctcaaggtttactttgatacaaagcttatatttatagtaaaagaatcc 50307889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2949481 - 2949568
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| | ||||||| |||||||| ||  |||| |||||| |||||| | | ||| |||||||||||||||| |||||||    
T  2949481 agttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggttttctcggattcaatatctatatttattgtaaaag 2949568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6823046 - 6822959
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||  ||||||||||    
T  6823046 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaag 6822959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 9241336 - 9241446
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccc-tatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 99  Q
    ||||||||||||||||||||||| |||||||| ||  ||| | |||||  |||||||| |||||||||   |||||||||||||||||| | || | |||    
T  9241336 agttttgttgttgcctttctaaa-ccttgtttcagcccccctctatcttaaggtttactctgatacaaagcctatatttatagtaaaagtaacccccata 9241434  T
Q  100 aaactggaacaa 111  Q
    ||| ||||||||    
T  9241435 aaattggaacaa 9241446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 31489793 - 31489726
Alignment:
Q  229 aaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 296  Q
    |||||||||| || ||||||  ||||||||||| |||||| ||||||||| |||||||||| ||||||    
T  31489793 aaaatcggcccccaattttctgcttccagaattccaatttcttcaattttaaggcactttcgcaacaa 31489726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 14183852 - 14183945
Alignment:
Q  17 ttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 111  Q
    ||||||| |||||||| ||  | || |||||| |||||||| ||||||||   ||||||||||||||||||||||||| || |||||| ||||||    
T  14183852 ttctaaacccttgtttcagccctctctatctcaaggtttactctgatacatggtctatatttatagtaaaagaatcct-aaaaaaactagaacaa 14183945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 30790681 - 30790731
Alignment:
Q  38 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||| |||||| |||||||| |||||||||| |||||||||||||||||||    
T  30790681 ccctctatctcaaggtttactctgatacaatgtctatatttatagtaaaag 30790731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31735771 - 31735862
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatc----tccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||||||  |||| ||||    || | |||||  |||||||||  |||||||||||||||||||    
T  31735771 agttttgttgttgcctttctaaacccttgttttagccccctctatctcattcaaagtttagcctgatacaaggtctatatttatagtaaaag 31735862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 165
Target Start/End: Complemental strand, 43104141 - 43104030
Alignment:
Q  50 aggtttacactgatacaatatctatatttatagtaaaagaatcc-tcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattt 148  Q
    |||||||| |||||||||  ||||||||||||||||||| |||| |||| |||||||||||||   ||||| | || ||||||| |||| ||||||||||    
T  43104141 aggtttactctgatacaaggtctatatttatagtaaaagtatccctcaa-aaaactggaacaa---atctaagccc-aaaaatatgtttctgttttattt 43104047  T
Q  149 tctgctgtcaaaatcgg 165  Q
    | || || |||||||||    
T  43104046 tatgttggcaaaatcgg 43104030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 18800861 - 18800914
Alignment:
Q  43 tatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctca 96  Q
    |||||| |||||||| |||||||||  ||||||||||||||||||| |||||||    
T  18800861 tatctcaaggtttactctgatacaaggtctatatttatagtaaaagtatcctca 18800914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 49495468 - 49495541
Alignment:
Q  20 taaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    |||| |||||||| ||  |||| |||||| |||||||| |||||||||  ||||||||||||||||||| ||||    
T  49495468 taaacccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatcc 49495541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2617547 - 2617459
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaaga 89  Q
    ||||||||||||| ||||||||| |||||||| ||   ||| |||||| | |||| | |||||||||  |||||||||||||| |||||    
T  2617547 agttttgttgttgtctttctaaacccttgtttcagcctcctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaaga 2617459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6995950 - 6996037
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| | ||||||  |  |||| |||||| || ||||| ||||| |||  |||||||||||| ||||||    
T  6995950 agttttgttgttgcctttctaaaccgttgtttcggccccctctatctcaagatttactctgattcaaggtctatatttataataaaag 6996037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10400078 - 10400165
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| | ||||||| |||||||| ||  |||| |||||||  |||| | |||||||||  ||||||||||||| |||||    
T  10400078 agttttgttgttgtcattctaaacccttgtttcagccccctctatctcccagtttgctctgatacaaggtctatatttatagaaaaag 10400165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 293
Target Start/End: Complemental strand, 18839350 - 18839311
Alignment:
Q  254 ccagaatttcaattttttcaattttgaggcactttcacaa 293  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  18839350 ccagaattccaatttattcaattttgaggcactttcacaa 18839311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20291488 - 20291401
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| |   |||| |||||| |  ||| | || ||||||  |||||||||||||||||||    
T  20291488 agttttgttgttgcctttctaaacccttgtttcatctccctctatctcaaaatttgctctaatacaaggtctatatttatagtaaaag 20291401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28998503 - 28998590
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| | ||||||| |||||||| ||   ||| |||||| | |||||| ||||| |||  |||||||||||||||||||    
T  28998503 agttttgttgttgtcattctaaacccttgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaag 28998590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29004219 - 29004306
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| | ||||||| |||||||| ||   ||| |||||| | |||||| ||||| |||  |||||||||||||||||||    
T  29004219 agttttgttgttgtcattctaaacccttgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaag 29004306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 40133929 - 40133874
Alignment:
Q  38 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||| || ||||| |||||||||   |||||||||||||||||||||||    
T  40133929 ccctatatctcaagatttactctgatacaaagcctatatttatagtaaaagaatcc 40133874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 42922216 - 42922173
Alignment:
Q  50 aggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||    
T  42922216 aggtttactctgatacaaaatctatatttatagtaaaagtatcc 42922173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 28842526 - 28842437
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtacc--ctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  ||  |||| |||| | |||| | |||||||||  | |||||||||||||||||    
T  28842526 agttttgttgttgcctttctaaacccttgtttcagccccctctatctctcaaagtttgctctgatacaaggtttatatttatagtaaaag 28842437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 16431095 - 16431022
Alignment:
Q  38 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 111  Q
    |||| |||||| |||||| | ||||||||| | |||||||||||||||||| ||||   |||||| ||||||||    
T  16431095 ccctctatctcaaggtttgctctgatacaaaacctatatttatagtaaaagtatccctcataaaattggaacaa 16431022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6823916 - 6823828
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttag-taccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||   |||| |||||| | |||| | |||||||||  |||||||  ||||||||||    
T  6823916 agttttgttgttgcctttctaaacccttgtttcagcccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaag 6823828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 6e-60; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 695920 - 695631
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| |   |||| |||||| ||||||||||| ||||||| |||||||| ||||||||||||| ||||||||    
T  695920 agttttgttgttgcctttctaaacccttgtttcatccccctttatctcaaggtttacactcatacaatgtctatattcatagtaaaagaattctcaataa 695821  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    |||||||   |||||||||||  |   ||||||||||||||| ||||||||| || |||||||||||| ||||||||||||||| |||||||||   |||    
T  695820 aactgga---acaaatctagg--cttgaaatacgtttatgttatattttctgttggcaaaatcggccatcgtgctcaccaaatcagccaccgataaatgt 695726  T
Q  201 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
     |||||   ||   ||| |  | || | ||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  695725 tgaacctgaagctcaaataaaacaggtcaaaatcggccaccaattttcagcttccagaatttcaatttcttcaattttgaggcactttcacaaca 695631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 4 - 198
Target Start/End: Original strand, 10474574 - 10474764
Alignment:
Q  4 tttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaac 103  Q
    ||||||||||||||||||||||||||||| ||  |||| ||| || ||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  10474574 tttgttgttgcctttctaaatccttgtttcagccccctctatttcaaggtttacactgatacaatgtctatatttatagtaagagaatcctcaataaaac 10474673  T
Q  104 tggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgattttt 198  Q
    |||   |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||    | |||||||||||||||||||||    
T  10474674 tgg---aacaaatctaggcccg-aaaatacgtttctgttttattttctgctgtcaaaatcggccaccgaatgctccaaatcggccaccgattttt 10474764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 39398241 - 39398431
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||||| | |||||| | |||||||||||||||||||||||||||||    
T  39398241 agttttgttgttgcctttctaaacccttgtttcagc-ccctctatctcaaggtttacaccggtacaatgtttatatttatagtaaaagaatcctcaataa 39398339  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttt 197  Q
    ||||||   |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  39398340 aactgg---aacaaatctaggcccg-aaaatacgtttatgttttattttctgctgtc-aaatcggccaccgtgctcaccgaatcggccaccaatttt 39398431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 17072914 - 17072721
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||| ||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17072914 agttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataa 17072815  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgattttt 198  Q
    || |||   |||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||    | |||||||||||||||||||||    
T  17072814 aaatgg---aacaaatctagg-cctgaaaatacgtttatgttttattttctactgtcaaaatcggccaccgaatgctccaaatcggccaccgattttt 17072721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 24126887 - 24126693
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||| |||||||||  ||||||| ||  || | |||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  24126887 agttttgttgttgtctttctaaactcttgtttcagccccatctatctcaaggtttacactgatataatgtctatatttatagtaaaagaatcctcaataa 24126788  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 199  Q
    |||||||   ||||||||||   || ||||||| |||||||||||||||||||||||||||||||||||||    | ||||||||||||||||||||||    
T  24126787 aactgga---acaaatctagactcg-aaaatacatttatgttttattttctgctgtcaaaatcggccaccgaatactccaaatcggccaccgatttttg 24126693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 2723961 - 2723804
Alignment:
Q  38 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgttt 137  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||   |||||||||||| ||| |||||||||||    
T  2723961 ccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaacttgg---aacaaatctaggcccg-aaaatacgttt 2723866  T
Q  138 atgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 199  Q
     |||||||||| |||||||||||||||||||||     | |||||| |||||||||||||||    
T  2723865 ctgttttatttcctgctgtcaaaatcggccaccaaatgctccaaattggccaccgatttttg 2723804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 20043081 - 20042915
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    |||||||||||||||||||||||  ||||||| ||  |||| |||||| |||||| |  ||||||||   ||||||||||||||||||||||||||||||    
T  20043081 agttttgttgttgcctttctaaacacttgtttcagccccctctatctcaaggtttgctatgatacaaagcctatatttatagtaaaagaatcctcaataa 20042982  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 171  Q
    ||||||   || ||||||||| ||| ||||||||||| |||||||||| ||| | ||||||||||||||||    
T  20042981 aactgg---aataaatctaggcccg-aaaatacgtttctgttttatttcctgatctcaaaatcggccaccg 20042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 20045041 - 20044875
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    |||||||||||||| || ||||| |||||||| ||  |||| | |||| |||||| | |||||||||   ||||||||||||||||||||||||||||||    
T  20045041 agttttgttgttgctttcctaaacccttgtttcagccccctctgtctcaaggtttgctctgatacaaagcctatatttatagtaaaagaatcctcaataa 20044942  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 171  Q
    |||||||   ||||||||||  ||| ||||||| ||| |||||||||  || |||||||||||||||||||    
T  20044941 aactgga---acaaatctagacccg-aaaatacatttctgttttattccctactgtcaaaatcggccaccg 20044875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 34530914 - 34531079
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    |||||||||||||| ||||||||  ||||||| ||  |||| |||||| |||||||| ||||| |||  |||||||||| |||||||||||||| || ||    
T  34530914 agttttgttgttgcatttctaaacacttgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttacagtaaaagaatcct-aaaaa 34531012  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 171  Q
    ||||||   |||||||||||| ||  ||||||||||||||||||||||||| || || || ||||||||||    
T  34531013 aactgg---aacaaatctagg-cctgaaaatacgtttatgttttattttctactatcgaattcggccaccg 34531079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 25904134 - 25904041
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcct 94  Q
    ||||||||||||| ||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| |||||    
T  25904134 agttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcct 25904041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 31472861 - 31472953
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||||||||||||| |||||||||||  |||| |||||| ||||||||||| ||||||| || |||||||||||||||| ||||    
T  31472861 agttttgttgttgcctttctaaacccttgttttagccccctctatctcaaggtttacactaatacaatgtccatatttatagtaaaagcatcc 31472953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 20507712 - 20507797
Alignment:
Q  3 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||| |||||||||||||||| |||||||| ||  |||| |||||| | |||||| ||||||||| ||||||||||||||||||||    
T  20507712 tttttttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaagatctatatttatagtaaaag 20507797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2818584 - 2818671
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||| |||||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  2818584 agttttgttgttacctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 2818671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 4236660 - 4236573
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||||||||||||||  ||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  4236660 agttttgttgttgcctttctaaactcttgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaag 4236573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31179619 - 31179706
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||| |||||||||||||||||||    
T  31179619 agttttgttgttgcctttctaaacccttgtttcagctccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaag 31179706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40221553 - 40221466
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| ||||||| |||||||| ||  |||| |||||| |||||||| ||||  |||| |||||||||||||||||||    
T  40221553 agttttgttgttgccattctaaacccttgtttcagccccctctatctcaaggtttactctgagtcaatgtctatatttatagtaaaag 40221466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 2723751 - 2723698
Alignment:
Q  239 accgattttcaacttccagaatttcaattttttcaattttgaggcactttcaca 292  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  2723751 accgattttcagcttccagaattccaatttcttcaattttgaggcactttcaca 2723698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 20044817 - 20044756
Alignment:
Q  235 ggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 296  Q
    ||||||||||||||  ||||||||||| |||||| |||||||||||| ||||||||||||||    
T  20044817 ggccaccgattttctgcttccagaattccaatttcttcaattttgagtcactttcacaacaa 20044756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17818738 - 17818817
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttata 81  Q
    |||||||||||||||||||||||  ||||||| ||  |||| | |||| ||||||||||||||||||| ||||||||||||    
T  17818738 agttttgttgttgcctttctaaactcttgtttcagc-ccctctttctcaaggtttacactgatacaatgtctatatttata 17818817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 37706031 - 37706115
Alignment:
Q  4 tttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||| |||||||||||||| | || ||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  37706031 tttgtcgttgcctttctaaacctttatttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaag 37706115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 38882137 - 38882049
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttag-taccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||   |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  38882137 agttttgttgttgcctttctaaacccttgtttcagcccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 38882049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2174950 - 2174863
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||   || |||||||||||||||    
T  2174950 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctgtatttatagtaaaag 2174863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25921721 - 25921808
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| ||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  25921721 agttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 25921808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 31542766 - 31542679
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  31542766 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 31542679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 31545111 - 31545024
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  31545111 agttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 31545024  T

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Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 24126640 - 24126579
Alignment:
Q  234 cggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    |||||||| ||||||| |||| |||||| |||||| |||||||||||| |||||||||||||    
T  24126640 cggccaccaattttcagcttctagaattccaatttcttcaattttgagacactttcacaaca 24126579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 26098506 - 26098586
Alignment:
Q  8 ttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||| ||||||| |||| ||| ||  |||| ||||||||||||||| ||||| |||  |||||||||||||||||||    
T  26098506 ttgttgccattctaaacccttatttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaag 26098586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6756525 - 6756438
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| | |||||| ||  |||| |||||| | |||||   |||||||| ||||||||| ||||||||||    
T  6756525 agttttgttgttgcctttctaaaccattgtttcagctccctctatctcaaagtttaatatgatacaagatctatattaatagtaaaag 6756438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12556171 - 12556258
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| | ||||||| |||| ||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  12556171 agttttgttgttgtcattctaaacccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 12556258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21948057 - 21947971
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| ||||||||| |||||||| ||  |||| |||||| |  ||||| |||||||||  |||||||||||||||||||    
T  21948057 agttttgttgttgtctttctaaacccttgtttcagc-ccctctatctcaaaatttactctgatacaaggtctatatttatagtaaaag 21947971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 39854514 - 39854428
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  39854514 agttttgttgttgcctttctaaacccttgtttcag-cccctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 39854428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 41585970 - 41586041
Alignment:
Q  17 ttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||| |||||||| ||  |||| |||||| |||||||| ||||||||| | ||||||||||||||||||    
T  41585970 ttctaaacccttgtttcagccccctttatctcaaggtttactctgatacaaaacctatatttatagtaaaag 41586041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 36208597 - 36208519
Alignment:
Q  16 tttctaaatccttgtttt-agtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    |||||||| ||||||||| ||  |||| |||||| |||||||| |||||||||  ||||||||||||||||||| ||||    
T  36208597 tttctaaacccttgttttcagccccctctatctcaaggtttactctgatacaaggtctatatttatagtaaaagcatcc 36208519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 20042838 - 20042770
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    ||||||||||||| | ||||||  ||||||||||| |||||| ||||||||| |  |||||||||||||    
T  20042838 tgaaaatcggccatcaattttcttcttccagaattccaatttcttcaattttaaatcactttcacaaca 20042770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10529347 - 10529434
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| |   | || |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  10529347 agttttgttgttgcctttctaaacccttgtttcaacccactctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 10529434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26097764 - 26097677
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| ||||||| | || ||| ||  |||| |||||| | |||||| ||||| |||  |||||||||||||||||||    
T  26097764 agttttgttgttgccattctaaacctttatttcagccccctctatctcaaagtttactctgattcaaggtctatatttatagtaaaag 26097677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27912567 - 27912520
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctc 48  Q
    ||||||||||||||||||||||| |||||||| || ||||| ||||||    
T  27912567 agttttgttgttgcctttctaaacccttgtttcagcaccctctatctc 27912520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 42770562 - 42770523
Alignment:
Q  230 aaatcggccaccgattttcaacttccagaatttcaatttt 269  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  42770562 aaatcggccaccgattttctgcttccagaatttcaatttt 42770523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16776189 - 16776101
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctata-tttatagtaaaag 88  Q
    |||||||||||||||||| |||| |||||||| ||  |||| |||||| | |||| | | |||||||  |||||| |||||||||||||    
T  16776189 agttttgttgttgcctttgtaaacccttgtttcagccccctctatctcaaagtttgctcagatacaaggtctatattttatagtaaaag 16776101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 17072671 - 17072619
Alignment:
Q  226 ttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttt 278  Q
    |||||||||||||||||||||||| ||| || |||| |||||| || ||||||    
T  17072671 ttgaaaatcggccaccgattttcagctttcaaaattccaatttctttaatttt 17072619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 3e-55; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 38270234 - 38270543
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||   | | |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38270234 agttttgttgttgcctttctaaacccttgtttcagcctcttctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataa 38270333  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    ||||||   |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||    | | |||||||||| |||||||||     
T  38270334 aactgg---aacaaatctaggcccg-aaaatacgtttctgttttattttctgctgtcaaaatcggccaccgaatgctctaaatcggccatcgatttttgc 38270429  T
Q  201 ggaaccaacagacaaaaaatca-------------------gagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgag 281  Q
     |||||||  | ||||||| ||                   |  |||||||||||||||||||||||  || ||||||||||||||| ||||||||||||    
T  38270430 cgaaccaaaggccaaaaaaacagtccaaaatcggctatcgtgctttgaaaatcggccaccgattttctgctaccagaatttcaatttcttcaattttgag 38270529  T
Q  282 gcactttcacaaca 295  Q
    ||||||||||||||    
T  38270530 gcactttcacaaca 38270543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 2891402 - 2891235
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgat-acaatatctatatttatagtaaaagaatcctcaata 99  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||  |||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  2891402 agttttgttgttgcctttctaaacccttgtttcagccccctctatcttaaggtttacactgattacaatgtctatatttatagtaaaagaatcctcaata 2891303  T
Q  100 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 171  Q
    ||||||||   ||||||||| |||| | |||||||||| |||||||||||||||||||||||||||||||||    
T  2891302 aaactgga---acaaatcta-gtcccataaatacgtttctgttttattttctgctgtcaaaatcggccaccg 2891235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 3937457 - 3937659
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    |||||| |||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||| ||  ||||||||||||||||||||||||| |||||    
T  3937457 agtttttttgttgcctttctaaacccttgtttcagctccctctatctcaaggtttactctgataaaag-tctatatttatagtaaaagaatcctaaataa 3937555  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 200  Q
    |||||||| ||   ||||||| ||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    || |||||||||||||||||     
T  3937556 aactggaaaaa---atctaggcccgaaaa-tacgtttctgttttatttcctgctgtcaaaatcggccaccgtgctgtagaattcggccaccgatttttgc 3937651  T
Q  201 ggaaccaa 208  Q
     |||||||    
T  3937652 tgaaccaa 3937659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 6132957 - 6132764
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    |||||||||||||||||||| || |||||||  ||   ||| |||||| | |||||||| |||||||| |||||||||||||||||||||||||||||||    
T  6132957 agttttgttgttgcctttctgaacccttgttc-agcctcctctatctcaatgtttacaccgatacaatgtctatatttatagtaaaagaatcctcaataa 6132859  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 199  Q
    ||||   | |||||||||||| |   ||||||||||||||||||||||| ||||||||||||||||||||     | ||||||||||||||||||||||    
T  6132858 aact---agaacaaatctagg-catgaaaatacgtttatgttttattttatgctgtcaaaatcggccaccaaatgctccaaatcggccaccgatttttg 6132764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 18409595 - 18409759
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  | || ||||||   ||||||||||||||||  ||||||||||||||||||||||||| || ||    
T  18409595 agttttgttgttgcctttctaaacccttgtttcagc-ctctctatctcattgtttacactgatacaaattctatatttatagtaaaagaatcct-aaaaa 18409692  T
Q  101 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 171  Q
    ||||||   |||||||||||| ||| |||||| || | ||||||||||||| |||||||| | ||||||||    
T  18409693 aactgg---aacaaatctaggcccg-aaaatatgtgtctgttttattttctactgtcaaatttggccaccg 18409759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 296
Target Start/End: Complemental strand, 47564588 - 47564497
Alignment:
Q  205 ccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 296  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||  |||||||||||  ||||| |||||||||||||||||||||||||||    
T  47564588 ccaacagacaaaaaaccagagtgcaaaatcggccaccgattttctgcttccagaattctaatttcttcaattttgaggcactttcacaacaa 47564497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 24446833 - 24446919
Alignment:
Q  7 gttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  24446833 gttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcc 24446919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 6132715 - 6132646
Alignment:
Q  227 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 296  Q
    |||||||| |||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  6132715 tgaaaatcagccaccgattttcagcttccagaattccaatttcttcaattttgaggcactttcacaacaa 6132646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 12396093 - 12396185
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    |||||||||||||||||||||||||||||||| ||  || | |||||| ||||||||| | ||||||| ||||||||||||||||||| ||||    
T  12396093 agttttgttgttgcctttctaaatccttgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaagcatcc 12396185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 12401055 - 12401147
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    |||||||||||||||||||||||||||||||| ||  || | |||||| ||||||||| | ||||||| ||||||||||||||||||| ||||    
T  12401055 agttttgttgttgcctttctaaatccttgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaagcatcc 12401147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 19095965 - 19095875
Alignment:
Q  3 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    ||||||||||| | ||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  19095965 ttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcc 19095875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 11435040 - 11434953
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  11435040 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 11434953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 51015331 - 51015244
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  51015331 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaagtctatatttatagtaaaag 51015244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 37313316 - 37313400
Alignment:
Q  3 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 87  Q
    ||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||  |||||||| | |||||||||||||||||    
T  37313316 ttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactttgatacaaaacctatatttatagtaaaa 37313400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 38928426 - 38928518
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    |||||||||||||||||||||||  ||||||| ||  |||| |||||| |||||||| || ||||||   |||||||||||||||||||||||    
T  38928426 agttttgttgttgcctttctaaactcttgtttcagccccctctatctcaaggtttactctaatacaaagcctatatttatagtaaaagaatcc 38928518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5198505 - 5198418
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  5198505 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 5198418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22044638 - 22044725
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||   ||||||||||||||||||    
T  22044638 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaag 22044725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22802982 - 22803069
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| ||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  22802982 agttttgttgttgccattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 22803069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24888881 - 24888794
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  24888881 agttttgttgttgcctttctaaacccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtaaaag 24888794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36378377 - 36378290
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  || | |||||| |||||||  |||||||||  |||||||||||||||||||    
T  36378377 agttttgttgttgcctttctaaacccttgtttcagccccgtctatctcaaggtttattctgatacaaagtctatatttatagtaaaag 36378290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40637159 - 40637072
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||| ||||    
T  40637159 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtgaaag 40637072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 47274812 - 47274725
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  47274812 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 47274725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 48486404 - 48486317
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| ||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  48486404 agttttgttgttgccattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 48486317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 36919833 - 36919922
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatc--tccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||||||||  || | |||||| |||||||||  |||||||||||||||||||    
T  36919833 agttttgttgttgcctttctaaacccttgtttcagccccctatatctatcaaagtttactctgatacaaggtctatatttatagtaaaag 36919922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 33415735 - 33415827
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    |||||||||||| |||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||   |||||||| |||||||| |||||    
T  33415735 agttttgttgttacctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttgtagtaaaaaaatcc 33415827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 41997577 - 41997485
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    |||||||||||| ||||||| ||  ||||||| ||  |||| |||||| |||||||| |||||||||  ||||||||||||||| ||||||||    
T  41997577 agttttgttgtttcctttctgaacacttgtttcagccccctttatctcaaggtttactctgatacaaagtctatatttatagtagaagaatcc 41997485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 619695 - 619782
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| |||| |||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  619695 agttttgttgttgtctttataaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 619782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5101082 - 5100995
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| | ||||||| | |||||| ||| |||| |||||| |||||||| ||||| |||  |||||||||||||||||||    
T  5101082 agttttgttgttgtcattctaaacctttgtttcagtcccctctatctcaaggtttaccctgattcaaggtctatatttatagtaaaag 5100995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9174394 - 9174481
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||||| |||||||| |||||||| ||  |||| |||||||| |||| |  ||||||||  |||||||||||||||||||    
T  9174394 agttttgttgttgcttttctaaacccttgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaaag 9174481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22046933 - 22047020
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | | |||||||   ||||||||||||||||||    
T  22046933 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctccgatacaaggcctatatttatagtaaaag 22047020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22801110 - 22801197
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| | ||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  22801110 agttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 22801197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24879074 - 24878987
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| ||||||||| ||| |||| ||  |||| |||||||| |||||| | |||||||  |||||||||||||||||||    
T  24879074 agttttgttgttgtctttctaaaccctagtttcagccccctctatctccaagtttactcggatacaaggtctatatttatagtaaaag 24878987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24880536 - 24880449
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| ||| ||||  |  |||| |||||||| |||||| | |||||||  |||||||||||||||||||    
T  24880536 agttttgttgttgcctttctaaaccctagtttacgccccctctatctccaagtttactccgatacaaggtctatatttatagtaaaag 24880449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31849847 - 31849934
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||  |||| | ||||||||| | |||||||| |||||||||    
T  31849847 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcctagtttgctctgatacaagacctatatttctagtaaaag 31849934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40091663 - 40091750
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| ||||||||| |||||||| ||  |||| |||||| | ||||||  ||||||||  |||||||||||||||||||    
T  40091663 agttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaag 40091750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7941406 - 7941317
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtacc--ctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  ||  |||| ||||| ||||| | |||||||||  |||||||||||||||||||    
T  7941406 agttttgttgttgcctttctaaacccttgtttcagccccctctatctctcccggtttgctctgatacaacgtctatatttatagtaaaag 7941317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 27499014 - 27498964
Alignment:
Q  246 ttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 296  Q
    |||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  27499014 ttcagcttccagaattccaatttcttcaattttgaggcactttcacaacaa 27498964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 59 - 163
Target Start/End: Original strand, 31983837 - 31983937
Alignment:
Q  59 ctgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtca 158  Q
    |||||||||| |||||| ||||| |||||| |||||  | |||||||||||||   ||||| | || ||||||| |||||||||||||||||||||| ||    
T  31983837 ctgatacaatgtctataattataataaaagtatccttcaaaaaactggaacaa---atctaagccc-aaaaatatgtttatgttttattttctgctggca 31983932  T
Q  159 aaatc 163  Q
    |||||    
T  31983933 aaatc 31983937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9176722 - 9176807
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaa 86  Q
    |||||||||||||| |||||||| |||||||| ||  |||| |||||||| |||| |  ||||||||  |||||||||||||||||    
T  9176722 agttttgttgttgcttttctaaacccttgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaa 9176807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6764924 - 6764837
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  || | |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  6764924 agttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 6764837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 47868486 - 47868399
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||| ||| ||  | || |||||||| |||| | |||||||||  |||||||||||||| ||||    
T  47868486 agttttgttgttgcctttctaaacccttctttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtgaaag 47868399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 56030529 - 56030443
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 87  Q
    ||||||||||||| | ||||||| |||||||| ||  || | |||||| |||||||| |||||||||   |||||||||||||||||    
T  56030529 agttttgttgttgtcattctaaacccttgtttcagccccttctatctcaaggtttactctgatacaaagcctatatttatagtaaaa 56030443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 18537733 - 18537806
Alignment:
Q  16 tttctaaatccttgtttt-agtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||| ||||||||| ||  |||| |||||| | |||||| ||||||||| ||||||||||||||||||||    
T  18537733 tttctaaacccttgttttcagccccctctatctcaatgtttactctgatacaagatctatatttatagtaaaag 18537806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2485120 - 2485208
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccc-tatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||||||  ||| | || ||| | |||| | |||||||||  |||||||||||||| ||||    
T  2485120 agttttgttgttgcctttctaaacccttgttttagcccccttctagctcaaagtttgctctgatacaaggtctatatttatagtgaaag 2485208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 27499108 - 27499076
Alignment:
Q  139 tgttttattttctgctgtcaaaatcggccaccg 171  Q
    |||||||||||||||||||||||||||||||||    
T  27499108 tgttttattttctgctgtcaaaatcggccaccg 27499076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37089619 - 37089709
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctc---caggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||| ||||||| |||||||| ||  |||| ||||||   || |||||  |||||||||  |||||||||||||||||||    
T  37089619 agttttgttgttgccattctaaacccttgtttcagccccctctatctctctcaagtttagcctgatacaaggtctatatttatagtaaaag 37089709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 14633404 - 14633318
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| | |||||| ||  || | |||||| | |||||| |||||||||  |||||||||||||| ||||    
T  14633404 agttttgttgttgcctttctaaacctttgtttcag-cccttctatctcaaagtttactctgatacaaggtctatatttatagtgaaag 14633318  T

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Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16453394 - 16453307
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||||||||| |||| |||||||| ||  |||| ||||||  ||||| | |||||||||   |||||||||||| |||||    
T  16453394 agttttgttgttgcctttttaaacccttgtttcagccccctctatctctcggtttgctctgatacaaagcctatatttatagcaaaag 16453307  T

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Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16934391 - 16934478
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||||| |||||||| |||||| | ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  16934391 agttttgttgttgcttttctaaacccttgtatcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 16934478  T

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Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44600086 - 44600173
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||||||||||| |||||||| |||||||| ||  |||| |||||| | |||| |  | ||||||  |||||||||||||||||||    
T  44600086 agttttgttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttaatacaaggtctatatttatagtaaaag 44600173  T

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Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 15032800 - 15032894
Alignment:
Q  17 ttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 111  Q
    ||||||| |||||||| ||  |||| |||||| |||||||| ||| ||| |  ||||||||||||||||||| ||||   |||||| ||||||||    
T  15032800 ttctaaacccttgtttcagccccctttatctcaaggtttactctggtaccaagtctatatttatagtaaaagtatccctcataaaattggaacaa 15032894  T

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Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 47210988 - 47211081
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctcc------aggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||||      | |||||  |||||||||  |||||||||||||||||||    
T  47210988 agttttgttgttgcctttctaaacccttgtttcagccccctctatctccctctcaaagtttagcctgatacaaggtctatatttatagtaaaag 47211081  T

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Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 8756540 - 8756585
Alignment:
Q  43 tatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||| |||||||| |||||||||  |||||||||||||||||||    
T  8756540 tatctcaaggtttactctgatacaaggtctatatttatagtaaaag 8756585  T

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Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 19322766 - 19322701
Alignment:
Q  17 ttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatag 82  Q
    ||||||| |||||||| |   |||| |||||| |||||||| ||||||||| ||||||||||||||    
T  19322766 ttctaaacccttgtttcatccccctctatctcaaggtttactctgatacaagatctatatttatag 19322701  T

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Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 295
Target Start/End: Complemental strand, 2891166 - 2891134
Alignment:
Q  263 caattttttcaattttgaggcactttcacaaca 295  Q
    |||||| ||||||||||||||||||||||||||    
T  2891166 caatttcttcaattttgaggcactttcacaaca 2891134  T

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Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 12102138 - 12102086
Alignment:
Q  38 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaa 90  Q
    |||| |||||| ||||||   ||||||||| ||||||||||||||||||||||    
T  12102138 ccctctatctcaaggttttatctgatacaagatctatatttatagtaaaagaa 12102086  T

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Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 18537989 - 18538029
Alignment:
Q  255 cagaatttcaattttttcaattttgaggcactttcacaaca 295  Q
    ||||| |||||||| |||||||||||| |||||||||||||    
T  18537989 cagaacttcaatttcttcaattttgagtcactttcacaaca 18538029  T

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Target: scaffold0011 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 35679 - 35580
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 100  Q
    ||||||||||||||||||||||| |||||||| ||  || | |||| || |||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  35679 agttttgttgttgcctttctaaacccttgtttcagcgcc-tctatcacccggtttgtactgatacaatgtctatatttatagtaaaagaatcctcaataa 35581  T

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Target: scaffold0004 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 79899 - 79807
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    |||||| |||||| ||||||||| |||||||| ||  |||| |||||| |||||||||||||||||| | |||||||||||||||||||||||    
T  79899 agttttattgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaaaaactatatttatagtaaaagaatcc 79807  T

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Target: scaffold0031 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 79225 - 79140
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaa 86  Q
    ||||||||||||||||||||||| |||||||||||  |||| |||||| || ||||| ||||| |||  |||||||||||||||||    
T  79225 agttttgttgttgcctttctaaacccttgttttagccccctctatctcaagttttactctgattcaaggtctatatttatagtaaa 79140  T

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Target: scaffold0339 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 4037 - 3950
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  4037 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 3950  T

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Target: scaffold0250 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2920 - 2833
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  2920 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaagttctatatttatagtaaaag 2833  T

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Target: scaffold0154 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 11721 - 11808
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||| | |||||||||| ||||| ||  |||| ||||||||||||||| ||||| |||  |||||||||||||||||||    
T  11721 agttttgttgttgtcattctaaatccctgtttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaag 11808  T

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Target: scaffold0131 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15059 - 14972
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||||| |||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  15059 agttttgttgttgcctttctaaatcattgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 14972  T

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Target: scaffold0038 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41731 - 41818
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  41731 agttttgttgttgcctttctaaacccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaag 41818  T

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Target: scaffold0552 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1079 - 1166
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| |||||||| ||  || | |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  1079 agttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 1166  T

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Target: scaffold0472 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6239 - 6152
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    |||||| ||||||| |||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  6239 agttttattgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 6152  T

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Target: scaffold0224 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 16115 - 16158
Alignment:
Q  50 aggtttacactgatacaatatctatatttatagtaaaagaatcc 93  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||    
T  16115 aggtttactctgatacaaaatctatatttatagtaaaagtatcc 16158  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 183888 - 183974
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 88  Q
    ||||||||||||||||||||||| | |||||| ||  || | |||||| | |||||| |||||||||  |||||||||||||| ||||    
T  183888 agttttgttgttgcctttctaaacctttgtttcag-cccttctatctcaaagtttactctgatacaaggtctatatttatagtgaaag 183974  T

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Target: scaffold0511 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2082 - 2036
Alignment:
Q  1 agttttgttgttgcctttctaaatccttgttttagtaccctatatct 47  Q
    ||||||||||||||||||||||| |||||||| ||  ||||||||||    
T  2082 agttttgttgttgcctttctaaacccttgtttcagccccctatatct 2036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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