View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11274_low_51 (Length: 250)
Name: NF11274_low_51
Description: NF11274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11274_low_51 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 38003166 - 38003406
Alignment:
| Q |
1 |
aaaagaaaaacacctttttattccactttatatctttgctttggttaata-tttaatacatataatacatatctcttcccaatttgatcatctcaaccat |
99 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38003166 |
aaaagaaaaacacctttttattccactttatatctttgctttggttaataatttaatacatataatacatatctcttcccaatttgatcatctcaaccat |
38003265 |
T |
|
| Q |
100 |
tttttaacggaaacagttggagatgtgacaaaaagggacctttcctactaaggtccaggtcggaatgatggacttccacatgcttaatatcgttgtcaac |
199 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38003266 |
tttttaacggaaacagttggagatgtgacaaaaagggacctttcctactaaggtccaggtcggaatgatggacttccacatgcttaatatcgttgtcaac |
38003365 |
T |
|
| Q |
200 |
attataatattcccatctgttaactttttcctcagttcatc |
240 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
38003366 |
attataatattcccatctgttaactttttcctcagttcatc |
38003406 |
T |
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