View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11274_low_55 (Length: 247)
Name: NF11274_low_55
Description: NF11274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11274_low_55 |
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Alignment Details
Target: chr3 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 56 - 239
Target Start/End: Original strand, 44840918 - 44841101
Alignment:
| Q |
56 |
ctcatttcatttcttgttttctaactattattannnnnnnctttcattttatgagcagagaaggaaaaaagcatgcaaactacacaaaccacactatctt |
155 |
Q |
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| T |
44840918 |
ctcatttcatttcttgttttctaactattattatttttttctttcattttataagcagagaaagaaaaaagcatgcaaactgcacaaaccacactatctt |
44841017 |
T |
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| Q |
156 |
tgatcactggtgagaagagcagtgagagccacgcgaaacgtgaagttcgggacaaaatgcaaaatgtcatgaaatgagtctgtg |
239 |
Q |
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| T |
44841018 |
tgatcactggtgagaagagcagtgagagccacgcgaaacgtgaagttcgggacaaaatgcaaaatgtcatgaaatgagtctgtg |
44841101 |
T |
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