View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11276_low_22 (Length: 249)

Name: NF11276_low_22
Description: NF11276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11276_low_22
NF11276_low_22
[»] scaffold0170 (1 HSPs)
scaffold0170 (16-249)||(9821-10050)
[»] chr4 (80 HSPs)
chr4 (12-139)||(36262777-36262902)
chr4 (16-130)||(5472867-5472981)
chr4 (16-139)||(38166005-38166128)
chr4 (16-144)||(47078436-47078564)
chr4 (16-139)||(29895765-29895888)
chr4 (22-139)||(3159479-3159596)
chr4 (26-139)||(40780871-40780984)
chr4 (16-130)||(1940796-1940907)
chr4 (12-144)||(3507245-3507376)
chr4 (16-122)||(1446804-1446910)
chr4 (22-139)||(7246656-7246773)
chr4 (22-139)||(20128293-20128410)
chr4 (17-138)||(20532420-20532541)
chr4 (22-99)||(38075417-38075494)
chr4 (22-130)||(49260684-49260792)
chr4 (16-127)||(41339417-41339528)
chr4 (16-130)||(42722596-42722710)
chr4 (16-140)||(27248406-27248528)
chr4 (22-129)||(6779195-6779302)
chr4 (16-139)||(8889000-8889123)
chr4 (16-139)||(36145225-36145348)
chr4 (16-139)||(52950060-52950183)
chr4 (16-139)||(53599038-53599161)
chr4 (49-139)||(30317244-30317334)
chr4 (12-126)||(43458587-43458701)
chr4 (22-139)||(15732458-15732575)
chr4 (42-139)||(48015083-48015180)
chr4 (15-139)||(21429278-21429402)
chr4 (42-129)||(3574466-3574553)
chr4 (16-139)||(24166428-24166551)
chr4 (16-99)||(40272381-40272464)
chr4 (16-139)||(55921012-55921135)
chr4 (16-114)||(29588714-29588812)
chr4 (16-122)||(48317302-48317408)
chr4 (22-139)||(14858695-14858811)
chr4 (42-139)||(16645122-16645219)
chr4 (42-130)||(14124020-14124108)
chr4 (48-128)||(16450310-16450390)
chr4 (42-122)||(43468351-43468431)
chr4 (16-120)||(55005335-55005439)
chr4 (16-139)||(2559285-2559408)
chr4 (16-139)||(33647699-33647822)
chr4 (63-133)||(17080068-17080138)
chr4 (16-138)||(41162893-41163015)
chr4 (26-130)||(295552-295655)
chr4 (42-129)||(7741929-7742016)
chr4 (16-139)||(13073516-13073639)
chr4 (42-117)||(14567963-14568038)
chr4 (16-99)||(24850677-24850759)
chr4 (42-139)||(10541020-10541116)
chr4 (40-121)||(20354639-20354720)
chr4 (65-129)||(21192667-21192731)
chr4 (16-139)||(4736575-4736698)
chr4 (16-139)||(14077924-14078047)
chr4 (75-133)||(14597916-14597974)
chr4 (25-139)||(15829686-15829800)
chr4 (49-99)||(20421784-20421834)
chr4 (51-121)||(35359749-35359819)
chr4 (16-130)||(38168235-38168348)
chr4 (54-139)||(47682392-47682476)
chr4 (42-122)||(8064825-8064905)
chr4 (75-130)||(14567276-14567331)
chr4 (64-139)||(37369052-37369127)
chr4 (42-125)||(45721090-45721173)
chr4 (49-139)||(4738629-4738719)
chr4 (48-139)||(31588694-31588787)
chr4 (16-122)||(42722406-42722511)
chr4 (42-99)||(26479999-26480056)
chr4 (13-139)||(33109297-33109425)
chr4 (66-139)||(50485971-50486044)
chr4 (12-132)||(7000498-7000613)
chr4 (60-139)||(18531541-18531620)
chr4 (50-140)||(9548723-9548813)
chr4 (42-84)||(13436816-13436858)
chr4 (41-139)||(24478994-24479092)
chr4 (37-139)||(48834710-48834811)
chr4 (16-139)||(6032653-6032773)
chr4 (70-119)||(15839965-15840014)
chr4 (16-72)||(13552092-13552148)
chr4 (48-140)||(26237431-26237523)
[»] chr2 (75 HSPs)
chr2 (16-144)||(10026621-10026749)
chr2 (16-140)||(38962736-38962860)
chr2 (16-139)||(25540414-25540537)
chr2 (16-130)||(42770670-42770784)
chr2 (16-140)||(38005375-38005499)
chr2 (16-127)||(8410104-8410215)
chr2 (16-139)||(10823033-10823156)
chr2 (16-130)||(331474-331588)
chr2 (22-139)||(44139463-44139580)
chr2 (16-144)||(10046482-10046609)
chr2 (48-139)||(34722685-34722776)
chr2 (45-144)||(41031911-41032010)
chr2 (12-130)||(6358170-6358288)
chr2 (33-130)||(45263686-45263783)
chr2 (19-126)||(3848937-3849044)
chr2 (42-133)||(7787055-7787146)
chr2 (16-139)||(18902540-18902663)
chr2 (16-99)||(41220608-41220691)
chr2 (16-130)||(3643906-3644020)
chr2 (16-126)||(19976830-19976940)
chr2 (16-130)||(22593108-22593221)
chr2 (12-126)||(37560142-37560256)
chr2 (42-139)||(12455309-12455406)
chr2 (16-140)||(35946712-35946835)
chr2 (16-139)||(7747247-7747370)
chr2 (44-139)||(10669593-10669688)
chr2 (16-139)||(11069851-11069974)
chr2 (16-99)||(21286417-21286500)
chr2 (16-139)||(34346297-34346420)
chr2 (12-139)||(39806895-39807022)
chr2 (16-139)||(44945567-44945689)
chr2 (16-130)||(2550841-2550955)
chr2 (42-139)||(3811701-3811798)
chr2 (16-96)||(20612588-20612669)
chr2 (42-139)||(28616389-28616486)
chr2 (18-130)||(9360767-9360879)
chr2 (16-99)||(15234111-15234194)
chr2 (12-130)||(18649045-18649163)
chr2 (42-148)||(39201509-39201615)
chr2 (22-139)||(13026421-13026538)
chr2 (22-139)||(14169619-14169736)
chr2 (16-117)||(21180346-21180447)
chr2 (54-139)||(27725951-27726036)
chr2 (22-122)||(16034916-16035016)
chr2 (22-96)||(34356185-34356259)
chr2 (16-77)||(13513978-13514039)
chr2 (50-139)||(16325602-16325691)
chr2 (49-130)||(24179575-24179655)
chr2 (53-130)||(26805306-26805383)
chr2 (41-130)||(29653625-29653713)
chr2 (45-97)||(2528393-2528445)
chr2 (25-99)||(2149244-2149319)
chr2 (16-139)||(12864197-12864320)
chr2 (25-133)||(14853381-14853491)
chr2 (24-99)||(37804941-37805016)
chr2 (16-138)||(29422188-29422310)
chr2 (22-99)||(15079462-15079539)
chr2 (22-99)||(25604574-25604650)
chr2 (42-133)||(25549727-25549818)
chr2 (62-125)||(28525479-28525542)
chr2 (16-99)||(41187682-41187765)
chr2 (42-96)||(43303345-43303399)
chr2 (32-125)||(5035277-5035370)
chr2 (66-99)||(13104875-13104908)
chr2 (42-99)||(33005751-33005807)
chr2 (16-117)||(41187822-41187923)
chr2 (42-133)||(31740777-31740868)
chr2 (42-133)||(33634455-33634546)
chr2 (65-139)||(20116622-20116696)
chr2 (32-125)||(10106577-10106670)
chr2 (63-128)||(16813186-16813251)
chr2 (63-128)||(16852465-16852530)
chr2 (63-144)||(29421302-29421383)
chr2 (62-119)||(30721885-30721942)
chr2 (42-99)||(40968965-40969022)
[»] scaffold0376 (1 HSPs)
scaffold0376 (12-139)||(12642-12769)
[»] chr7 (62 HSPs)
chr7 (16-139)||(1605917-1606040)
chr7 (16-129)||(34659202-34659315)
chr7 (22-139)||(38578877-38578994)
chr7 (16-139)||(22993377-22993500)
chr7 (22-139)||(17748392-17748509)
chr7 (16-139)||(22973943-22974066)
chr7 (16-139)||(48804659-48804782)
chr7 (16-139)||(13095834-13095957)
chr7 (12-139)||(18785641-18785768)
chr7 (16-133)||(1797436-1797553)
chr7 (16-133)||(43861988-43862105)
chr7 (16-99)||(10047926-10048009)
chr7 (16-99)||(47341852-47341935)
chr7 (16-130)||(16802099-16802213)
chr7 (26-139)||(5069825-5069938)
chr7 (16-120)||(21190809-21190913)
chr7 (16-144)||(43346784-43346912)
chr7 (42-126)||(49142692-49142776)
chr7 (16-139)||(27028255-27028378)
chr7 (16-99)||(43925488-43925571)
chr7 (42-144)||(36619259-36619361)
chr7 (42-139)||(3353427-3353523)
chr7 (50-139)||(23658189-23658278)
chr7 (42-130)||(26423306-26423394)
chr7 (32-139)||(28396170-28396277)
chr7 (16-139)||(42210272-42210395)
chr7 (42-140)||(14535293-14535391)
chr7 (64-129)||(41945497-41945562)
chr7 (42-130)||(27875107-27875195)
chr7 (42-126)||(30827294-30827378)
chr7 (16-139)||(21530724-21530847)
chr7 (43-130)||(39474943-39475030)
chr7 (16-139)||(45447946-45448069)
chr7 (16-130)||(14650293-14650407)
chr7 (16-133)||(5039434-5039551)
chr7 (62-139)||(8734696-8734773)
chr7 (42-139)||(10317756-10317852)
chr7 (25-139)||(24969336-24969448)
chr7 (12-99)||(42032068-42032155)
chr7 (16-139)||(45960013-45960135)
chr7 (24-130)||(4195221-4195327)
chr7 (12-122)||(20247197-20247306)
chr7 (16-90)||(22268088-22268162)
chr7 (42-99)||(365142-365199)
chr7 (16-112)||(37514897-37514993)
chr7 (51-139)||(45697200-45697287)
chr7 (42-130)||(3603355-3603447)
chr7 (61-140)||(28744183-28744262)
chr7 (42-97)||(29151942-29151997)
chr7 (50-117)||(32823253-32823320)
chr7 (64-126)||(39420861-39420923)
chr7 (61-139)||(48551878-48551956)
chr7 (16-133)||(4706000-4706117)
chr7 (65-126)||(19914726-19914787)
chr7 (50-99)||(46414685-46414734)
chr7 (16-122)||(4228781-4228884)
chr7 (36-116)||(25197150-25197230)
chr7 (87-139)||(32768984-32769036)
chr7 (42-129)||(4973130-4973217)
chr7 (42-133)||(48244372-48244463)
chr7 (16-72)||(9685715-9685771)
chr7 (74-130)||(38988934-38988990)
[»] chr8 (53 HSPs)
chr8 (30-139)||(43032892-43033001)
chr8 (16-130)||(18373987-18374101)
chr8 (16-129)||(17981418-17981531)
chr8 (16-130)||(14666090-14666204)
chr8 (42-134)||(33401814-33401906)
chr8 (16-139)||(2964053-2964176)
chr8 (16-139)||(15884566-15884688)
chr8 (16-110)||(13358999-13359093)
chr8 (41-139)||(583816-583912)
chr8 (16-130)||(6100449-6100563)
chr8 (22-99)||(1013027-1013104)
chr8 (22-139)||(8141085-8141202)
chr8 (16-139)||(9860005-9860129)
chr8 (16-140)||(24837219-24837343)
chr8 (19-139)||(45521149-45521268)
chr8 (16-139)||(3418523-3418646)
chr8 (16-99)||(38922464-38922547)
chr8 (25-139)||(10927592-10927706)
chr8 (12-130)||(14846549-14846666)
chr8 (16-121)||(2467146-2467251)
chr8 (42-139)||(4479306-4479402)
chr8 (42-135)||(6042824-6042917)
chr8 (16-89)||(6940535-6940608)
chr8 (16-120)||(13085501-13085605)
chr8 (22-130)||(16893920-16894027)
chr8 (26-126)||(26570911-26571011)
chr8 (16-99)||(34846791-34846873)
chr8 (22-120)||(44031464-44031567)
chr8 (16-139)||(44893288-44893411)
chr8 (42-123)||(33935761-33935842)
chr8 (22-130)||(34710586-34710694)
chr8 (49-130)||(16291222-16291303)
chr8 (42-139)||(43027308-43027405)
chr8 (55-99)||(8586989-8587033)
chr8 (16-99)||(11785893-11785975)
chr8 (48-135)||(27975900-27975987)
chr8 (48-135)||(28033169-28033256)
chr8 (16-90)||(22810057-22810130)
chr8 (49-139)||(23895578-23895668)
chr8 (16-98)||(29933750-29933831)
chr8 (58-139)||(13357966-13358047)
chr8 (67-124)||(18091428-18091485)
chr8 (42-139)||(36662408-36662504)
chr8 (47-139)||(68108-68200)
chr8 (61-133)||(7673673-7673745)
chr8 (67-139)||(24938572-24938644)
chr8 (32-96)||(34613831-34613895)
chr8 (49-133)||(35496271-35496355)
chr8 (51-134)||(22958782-22958865)
chr8 (42-99)||(3567907-3567964)
chr8 (75-139)||(10698937-10699001)
chr8 (59-130)||(22212534-22212606)
chr8 (16-84)||(22276545-22276613)
[»] chr5 (73 HSPs)
chr5 (16-144)||(7866555-7866683)
chr5 (16-139)||(9812846-9812969)
chr5 (16-139)||(12766105-12766228)
chr5 (42-139)||(9805004-9805101)
chr5 (13-129)||(12081879-12081995)
chr5 (16-139)||(12704988-12705111)
chr5 (16-139)||(42086301-42086424)
chr5 (42-144)||(38897724-38897825)
chr5 (12-144)||(4016260-4016392)
chr5 (16-139)||(20525812-20525935)
chr5 (36-139)||(42291515-42291618)
chr5 (16-133)||(3653930-3654045)
chr5 (16-130)||(14974343-14974457)
chr5 (16-130)||(19572698-19572812)
chr5 (42-140)||(23383657-23383755)
chr5 (16-139)||(1538405-1538528)
chr5 (16-91)||(1898975-1899050)
chr5 (16-139)||(7308374-7308497)
chr5 (16-139)||(8513493-8513616)
chr5 (16-115)||(25417217-25417316)
chr5 (42-137)||(30995121-30995216)
chr5 (16-98)||(5731971-5732053)
chr5 (42-132)||(21149734-21149824)
chr5 (42-139)||(37263241-37263337)
chr5 (16-104)||(35403557-35403645)
chr5 (42-126)||(38369700-38369783)
chr5 (42-133)||(18262634-18262725)
chr5 (16-99)||(28857102-28857185)
chr5 (16-126)||(39728361-39728471)
chr5 (16-97)||(18136332-18136413)
chr5 (25-129)||(14588637-14588741)
chr5 (16-99)||(13664234-13664317)
chr5 (60-139)||(39099789-39099868)
chr5 (16-130)||(5079305-5079419)
chr5 (60-130)||(20682636-20682706)
chr5 (12-126)||(35813021-35813135)
chr5 (51-133)||(40117424-40117506)
chr5 (42-139)||(20228717-20228814)
chr5 (49-125)||(24463910-24463986)
chr5 (16-99)||(26077115-26077198)
chr5 (16-98)||(11845852-11845934)
chr5 (16-126)||(23247374-23247484)
chr5 (42-116)||(41800977-41801051)
chr5 (16-129)||(20255343-20255456)
chr5 (59-128)||(43399145-43399214)
chr5 (16-96)||(14152024-14152104)
chr5 (42-90)||(40060296-40060344)
chr5 (16-140)||(41163469-41163592)
chr5 (16-139)||(2485171-2485293)
chr5 (41-139)||(14728081-14728180)
chr5 (16-139)||(15034049-15034172)
chr5 (16-99)||(28862799-28862882)
chr5 (16-126)||(24875319-24875429)
chr5 (22-96)||(30349559-30349633)
chr5 (16-130)||(42861237-42861351)
chr5 (65-130)||(9168272-9168337)
chr5 (40-125)||(19839325-19839410)
chr5 (41-138)||(22295215-22295312)
chr5 (63-139)||(18294494-18294570)
chr5 (16-90)||(16755035-16755109)
chr5 (75-148)||(6764458-6764531)
chr5 (22-139)||(20692913-20693030)
chr5 (50-125)||(21487625-21487697)
chr5 (42-99)||(35006785-35006842)
chr5 (49-116)||(1826864-1826932)
chr5 (63-99)||(20590020-20590056)
chr5 (64-144)||(21375373-21375453)
chr5 (51-99)||(25467419-25467467)
chr5 (66-132)||(7336644-7336710)
chr5 (52-90)||(20516460-20516498)
chr5 (32-97)||(18045629-18045694)
chr5 (42-99)||(20705563-20705620)
chr5 (42-99)||(38297014-38297071)
[»] chr6 (40 HSPs)
chr6 (16-139)||(5253233-5253356)
chr6 (21-140)||(3587954-3588073)
chr6 (16-139)||(6606107-6606230)
chr6 (16-139)||(8611984-8612107)
chr6 (16-139)||(21898625-21898748)
chr6 (42-139)||(3601087-3601184)
chr6 (16-129)||(12606407-12606520)
chr6 (16-139)||(30788863-30788984)
chr6 (16-130)||(10311488-10311602)
chr6 (16-144)||(2271308-2271434)
chr6 (22-139)||(8932644-8932761)
chr6 (22-139)||(8944110-8944227)
chr6 (12-139)||(12635787-12635914)
chr6 (16-139)||(19089475-19089598)
chr6 (66-139)||(9633635-9633708)
chr6 (43-144)||(29444770-29444871)
chr6 (16-99)||(13036054-13036137)
chr6 (16-138)||(9179747-9179869)
chr6 (12-130)||(11142576-11142694)
chr6 (16-130)||(13468910-13469024)
chr6 (47-140)||(5029825-5029918)
chr6 (16-120)||(14107387-14107491)
chr6 (16-139)||(34954629-34954752)
chr6 (16-128)||(9366445-9366556)
chr6 (41-99)||(33859369-33859427)
chr6 (11-99)||(9147273-9147361)
chr6 (16-128)||(29333160-29333271)
chr6 (16-99)||(24671916-24671999)
chr6 (67-133)||(8888910-8888976)
chr6 (42-120)||(13391290-13391367)
chr6 (49-128)||(13627257-13627336)
chr6 (16-130)||(15643853-15643961)
chr6 (65-126)||(17114920-17114981)
chr6 (50-99)||(30410456-30410505)
chr6 (55-99)||(31129193-31129237)
chr6 (64-139)||(32157177-32157252)
chr6 (42-116)||(19230592-19230665)
chr6 (26-83)||(2105156-2105213)
chr6 (41-97)||(10312745-10312801)
chr6 (42-126)||(33940014-33940098)
[»] chr1 (80 HSPs)
chr1 (26-133)||(33498856-33498963)
chr1 (17-139)||(43959832-43959954)
chr1 (22-130)||(37339799-37339908)
chr1 (16-140)||(17642014-17642138)
chr1 (16-138)||(9853289-9853411)
chr1 (16-130)||(11397909-11398022)
chr1 (16-133)||(10336490-10336607)
chr1 (16-132)||(18649370-18649486)
chr1 (22-130)||(18915847-18915955)
chr1 (16-139)||(5855496-5855619)
chr1 (16-139)||(8763965-8764088)
chr1 (18-139)||(14254279-14254400)
chr1 (16-144)||(16956440-16956568)
chr1 (16-128)||(33418137-33418249)
chr1 (16-92)||(34334353-34334429)
chr1 (16-139)||(2567250-2567373)
chr1 (12-139)||(17092488-17092615)
chr1 (16-139)||(41663867-41663990)
chr1 (16-139)||(50371845-50371968)
chr1 (16-139)||(50503372-50503495)
chr1 (12-138)||(12036756-12036882)
chr1 (16-116)||(2980965-2981065)
chr1 (42-130)||(15238126-15238214)
chr1 (16-140)||(34719750-34719874)
chr1 (16-116)||(49078088-49078188)
chr1 (16-139)||(30927738-30927861)
chr1 (16-99)||(31576598-31576681)
chr1 (16-139)||(32142857-32142979)
chr1 (16-99)||(45361933-45362016)
chr1 (17-139)||(15465940-15466062)
chr1 (16-122)||(33004043-33004149)
chr1 (22-139)||(42710149-42710266)
chr1 (16-128)||(10422762-10422874)
chr1 (16-144)||(40288483-40288611)
chr1 (16-99)||(6563415-6563498)
chr1 (16-139)||(26325786-26325909)
chr1 (16-129)||(31152690-31152803)
chr1 (42-126)||(34697335-34697419)
chr1 (16-99)||(17358522-17358605)
chr1 (47-130)||(21849225-21849307)
chr1 (16-99)||(48798121-48798204)
chr1 (16-130)||(9659199-9659312)
chr1 (17-139)||(10172982-10173104)
chr1 (25-99)||(16263528-16263602)
chr1 (41-139)||(44969664-44969761)
chr1 (47-140)||(41696608-41696701)
chr1 (22-99)||(45536688-45536765)
chr1 (12-128)||(5063866-5063981)
chr1 (22-122)||(13262063-13262163)
chr1 (22-97)||(34877970-34878045)
chr1 (42-133)||(45726450-45726541)
chr1 (16-90)||(8905211-8905284)
chr1 (22-128)||(48761156-48761262)
chr1 (74-139)||(4581693-4581758)
chr1 (51-139)||(12744534-12744622)
chr1 (51-139)||(12755524-12755612)
chr1 (22-98)||(31734269-31734344)
chr1 (16-99)||(32845-32928)
chr1 (47-126)||(38859140-38859219)
chr1 (16-138)||(892314-892431)
chr1 (49-139)||(5504038-5504128)
chr1 (22-112)||(14357735-14357825)
chr1 (16-130)||(26258670-26258783)
chr1 (16-90)||(51437443-51437517)
chr1 (64-133)||(5143171-5143239)
chr1 (42-139)||(26660138-26660234)
chr1 (42-99)||(28324631-28324688)
chr1 (42-122)||(35908757-35908838)
chr1 (22-99)||(47312950-47313026)
chr1 (49-93)||(18808272-18808316)
chr1 (42-130)||(25165401-25165488)
chr1 (81-139)||(6899597-6899655)
chr1 (42-116)||(17988694-17988767)
chr1 (61-139)||(38791621-38791699)
chr1 (65-99)||(42744801-42744835)
chr1 (18-99)||(13265914-13265995)
chr1 (49-126)||(32150946-32151023)
chr1 (42-126)||(18708564-18708648)
chr1 (67-99)||(19195391-19195423)
chr1 (63-139)||(50094925-50095001)
[»] chr3 (82 HSPs)
chr3 (22-144)||(30767253-30767375)
chr3 (22-139)||(49198330-49198447)
chr3 (22-130)||(7328823-7328930)
chr3 (16-139)||(35315929-35316052)
chr3 (16-139)||(51060292-51060415)
chr3 (16-133)||(13893899-13894016)
chr3 (42-138)||(8164552-8164648)
chr3 (16-128)||(41630534-41630646)
chr3 (16-139)||(15320159-15320282)
chr3 (12-98)||(11687161-11687247)
chr3 (42-144)||(30045820-30045922)
chr3 (42-139)||(28572222-28572319)
chr3 (16-133)||(35923640-35923757)
chr3 (16-116)||(6462385-6462485)
chr3 (43-139)||(26043812-26043908)
chr3 (22-130)||(29135892-29136000)
chr3 (16-140)||(49543492-49543616)
chr3 (16-144)||(51682960-51683088)
chr3 (16-139)||(47219117-47219240)
chr3 (16-139)||(48341993-48342116)
chr3 (48-139)||(50405614-50405705)
chr3 (16-139)||(53649700-53649823)
chr3 (16-130)||(10040530-10040643)
chr3 (16-118)||(10855357-10855459)
chr3 (16-130)||(25294933-25295047)
chr3 (16-122)||(42412802-42412908)
chr3 (22-128)||(47749127-47749232)
chr3 (42-139)||(3507544-3507641)
chr3 (22-139)||(29127898-29128015)
chr3 (12-137)||(40944852-40944976)
chr3 (16-125)||(49082797-49082906)
chr3 (12-128)||(3136716-3136831)
chr3 (42-130)||(7650226-7650314)
chr3 (16-116)||(26207835-26207935)
chr3 (16-139)||(29762166-29762289)
chr3 (16-139)||(54261199-54261322)
chr3 (16-129)||(928573-928686)
chr3 (16-128)||(31072851-31072963)
chr3 (16-122)||(15795522-15795627)
chr3 (22-116)||(45877433-45877527)
chr3 (16-137)||(3763024-3763144)
chr3 (42-139)||(7310714-7310811)
chr3 (22-127)||(47303512-47303617)
chr3 (16-128)||(32873571-32873682)
chr3 (67-139)||(43330743-43330815)
chr3 (59-126)||(7648756-7648823)
chr3 (16-99)||(52364851-52364934)
chr3 (16-126)||(33251635-33251745)
chr3 (48-97)||(26590319-26590368)
chr3 (42-139)||(47471831-47471927)
chr3 (16-128)||(3755543-3755655)
chr3 (49-125)||(4638160-4638236)
chr3 (42-126)||(23511566-23511650)
chr3 (42-89)||(7612987-7613034)
chr3 (50-133)||(41219599-41219682)
chr3 (12-99)||(54237417-54237504)
chr3 (64-139)||(55069690-55069765)
chr3 (49-139)||(26361978-26362068)
chr3 (47-121)||(39849076-39849149)
chr3 (12-130)||(40660347-40660465)
chr3 (12-140)||(45402361-45402486)
chr3 (42-139)||(8362576-8362673)
chr3 (46-139)||(24506659-24506751)
chr3 (16-117)||(28242251-28242352)
chr3 (22-139)||(35998582-35998698)
chr3 (51-139)||(19146969-19147057)
chr3 (42-96)||(46529924-46529978)
chr3 (31-144)||(22909772-22909884)
chr3 (16-77)||(30735018-30735079)
chr3 (59-139)||(34374453-34374533)
chr3 (83-139)||(44064584-44064640)
chr3 (12-88)||(50682446-50682522)
chr3 (67-130)||(2668085-2668148)
chr3 (24-99)||(33688932-33689007)
chr3 (16-99)||(45450498-45450579)
chr3 (42-96)||(13167497-13167551)
chr3 (22-136)||(38394189-38394301)
chr3 (16-93)||(5549270-5549346)
chr3 (32-129)||(22405564-22405661)
chr3 (65-97)||(19873388-19873420)
chr3 (47-99)||(41223089-41223140)
chr3 (79-139)||(49021214-49021274)
[»] scaffold0006 (1 HSPs)
scaffold0006 (16-130)||(68493-68604)
[»] scaffold0291 (1 HSPs)
scaffold0291 (42-139)||(6857-6954)
[»] scaffold0010 (2 HSPs)
scaffold0010 (51-130)||(155730-155809)
scaffold0010 (49-139)||(25794-25884)
[»] scaffold0016 (1 HSPs)
scaffold0016 (42-140)||(8710-8808)
[»] scaffold0005 (4 HSPs)
scaffold0005 (16-120)||(271103-271207)
scaffold0005 (42-117)||(249337-249412)
scaffold0005 (75-133)||(219404-219462)
scaffold0005 (75-130)||(250044-250099)
[»] scaffold0209 (1 HSPs)
scaffold0209 (41-139)||(12576-12672)
[»] scaffold0004 (2 HSPs)
scaffold0004 (23-139)||(7845-7961)
scaffold0004 (67-130)||(94999-95063)
[»] scaffold0029 (1 HSPs)
scaffold0029 (42-129)||(41046-41133)
[»] scaffold0002 (4 HSPs)
scaffold0002 (16-130)||(319398-319512)
scaffold0002 (16-139)||(546-669)
scaffold0002 (16-84)||(412091-412159)
scaffold0002 (42-96)||(139437-139491)
[»] scaffold0341 (1 HSPs)
scaffold0341 (16-99)||(18608-18691)
[»] scaffold0086 (1 HSPs)
scaffold0086 (42-121)||(26185-26264)
[»] scaffold0079 (1 HSPs)
scaffold0079 (16-97)||(8151-8231)
[»] scaffold0009 (2 HSPs)
scaffold0009 (42-139)||(42842-42939)
scaffold0009 (42-83)||(9438-9479)
[»] scaffold0316 (1 HSPs)
scaffold0316 (42-130)||(1633-1721)
[»] scaffold0024 (1 HSPs)
scaffold0024 (51-139)||(149396-149484)
[»] scaffold0223 (1 HSPs)
scaffold0223 (48-130)||(16887-16969)
[»] scaffold0013 (1 HSPs)
scaffold0013 (44-139)||(51735-51826)
[»] scaffold0050 (1 HSPs)
scaffold0050 (16-94)||(72609-72686)
[»] scaffold0384 (1 HSPs)
scaffold0384 (42-139)||(5975-6071)
[»] scaffold0011 (2 HSPs)
scaffold0011 (26-139)||(224303-224416)
scaffold0011 (26-116)||(186504-186593)
[»] scaffold0116 (1 HSPs)
scaffold0116 (51-139)||(17401-17489)
[»] scaffold0041 (1 HSPs)
scaffold0041 (63-139)||(25108-25184)
[»] scaffold0001 (1 HSPs)
scaffold0001 (63-99)||(65202-65238)
[»] scaffold0635 (1 HSPs)
scaffold0635 (32-125)||(2114-2207)


Alignment Details
Target: scaffold0170 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 249
Target Start/End: Original strand, 9821 - 10050
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||||||||| |   |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  9821 agctccttccaaggatgtatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtc 9920  T
Q  116 gcccacctttggtggatcagaaactagtgaaaagccnnnnnnnnnnnnnnnnttggcatttttaataaatcataaatatattaaaatatccacacatttt 215  Q
    | ||||||||||||| |||||||| |||||||||||                |||||||||||||||||||||||||||||||||||||||||||| |||    
T  9921 gtccacctttggtgggtcagaaaccagtgaaaagcc----aaaaaaataaaattggcatttttaataaatcataaatatattaaaatatccacacaattt 10016  T
Q  216 tcaagaattatggagaaaactccacaccttggga 249  Q
    ||||||||||||||||||||||||||||||||||    
T  10017 tcaagaattatggagaaaactccacaccttggga 10050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 36262902 - 36262777
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||| ||| |||||||    
T  36262902 aagaagctccttccaaggacgtacccggagaataccgggttcgattcccaggg--aacaacgcttggccagtgcacatgcctctacgcacgagtcggatt 36262805  T
Q  112 agtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||||| ||||||||    
T  36262804 agtcgcccacctttggtgggtcagaaac 36262777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 5472981 - 5472867
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    |||||||| |||||| ||||||||  |||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  5472981 agctcatttcaaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtc 5472882  T
Q  116 gcccacctttggtgg 130  Q
    |||||||||||||||    
T  5472881 gcccacctttggtgg 5472867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 38166005 - 38166128
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  ||||| ||||| ||||| ||||||||||||||||||||||||||||||| |||||||| |||  ||||||||||    
T  38166005 agctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgcgcatggctctacgcacgagccggattagtc 38166104  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    ||||||||||||||| || |||||    
T  38166105 gcccacctttggtgggtcggaaac 38166128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 47078436 - 47078564
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||  ||||||||||    
T  47078436 agctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtc 47078535  T
Q  116 gcccacctttggtggatcagaaactagtg 144  Q
    || |||| ||||||| || ||||| ||||    
T  47078536 gctcaccattggtgggtcggaaaccagtg 47078564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 29895765 - 29895888
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||    
T  29895765 agctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 29895864  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||| ||||||| || |||||    
T  29895865 gtccaccattggtggttcggaaac 29895888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 3159596 - 3159479
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| ||||||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||||||||| |||  | |||||||||| |||    
T  3159596 ttccaaggacgtatccggagaataccgggttcgacttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcac 3159497  T
Q  122 ctttggtggatcagaaac 139  Q
    | ||||||| || |||||    
T  3159496 cattggtgggtcggaaac 3159479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 40780984 - 40780871
Alignment:
Q  26 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 125  Q
    ||||| |||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||  ||  ||||||||||| ||||||||    
T  40780984 aaggacgtattcggaaaatatcgggttcgattctcaaggggaacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccttt 40780885  T
Q  126 ggtggatcagaaac 139  Q
    ||||| || |||||    
T  40780884 ggtgggtcggaaac 40780871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 1940907 - 1940796
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| |||| ||||| |||||||||||| |||||||||||||||||||   |||||||||||||||||| |||  ||||||||||    
T  1940907 agctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtc 1940811  T
Q  116 gcccacctttggtgg 130  Q
    |||||||||||||||    
T  1940810 gcccacctttggtgg 1940796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 3507245 - 3507376
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||| || |||| ||||||||||| |||| |||||||||||| || ||| ||||||||||||| ||||||| ||||||||| | |||  ||||||    
T  3507245 aagaagctcctttcaagaatgtatccggagaatatcgggttcgattcccaaggg-aacaacgcttggctagtgcgcgtgcctctacacacgagccggatt 3507343  T
Q  112 agtcgcccacctttggtggatcagaaactagtg 144  Q
    ||||| |||||||||||||||| ||||||||||    
T  3507344 agtcgtccacctttggtggatcggaaactagtg 3507376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 1446804 - 1446910
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||    
T  1446804 agctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 1446903  T
Q  116 gcccacc 122  Q
    | |||||    
T  1446904 gtccacc 1446910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 7246773 - 7246656
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| ||| ||||  ||||| |||||||||||  || ||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||    
T  7246773 ttccaaggacgtacccggggaatactgggttcgattcctagtgggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccac 7246674  T
Q  122 ctttggtggatcagaaac 139  Q
    ||||||||| || |||||    
T  7246673 ctttggtgggtcggaaac 7246656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 20128293 - 20128410
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| ||||||||  ||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||    ||||||||| ||||    
T  20128293 ttccaaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcacgagctagattagtcgtccac 20128392  T
Q  122 ctttggtggatcagaaac 139  Q
    | ||||||| ||||||||    
T  20128393 cattggtgggtcagaaac 20128410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 20532541 - 20532420
Alignment:
Q  17 gctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 116  Q
    |||||||||||||   || ||||| ||||||| ||||||||  |||| |||||||||||||||||||||||||||||||||||  ||  ||||| |||||    
T  20532541 gctcattccaaggccatacccggagaataccgagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggataagtcg 20532442  T
Q  117 cccacctttggtggatcagaaa 138  Q
    ||||||||||||||||| ||||    
T  20532441 cccacctttggtggatcggaaa 20532420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 38075417 - 38075494
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||| |||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38075417 ttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgc 38075494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 49260792 - 49260684
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||||||||||||  ||||| |  ||| |||| || ||||||||||||||||||||||||||||||||||||| |||  ||||||||||| ||||    
T  49260792 ttccaaggatgtatccggggaatactgaattcaattcccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgaccac 49260693  T
Q  122 ctttggtgg 130  Q
    |||||||||    
T  49260692 ctttggtgg 49260684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 41339528 - 41339417
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||| |||||||||||||| || || |||||||||||||||||||||| | |||||||||||| |||  ||||||||||    
T  41339528 agctccttccaaggacgtacccggagaataccgggttcgactcccaaggggaacaacgcttggccagtgtgtatgcctctacgcacgagacggattagtc 41339429  T
Q  116 gcccacctttgg 127  Q
    ||||||| ||||    
T  41339428 gcccaccattgg 41339417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 42722710 - 42722596
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| |||| ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||  ||  ||||||||||    
T  42722710 agctccttccaaggacgtacccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 42722611  T
Q  116 gcccacctttggtgg 130  Q
    |  ||||||| ||||    
T  42722610 gttcacctttagtgg 42722596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 27248406 - 27248528
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  |||||||||||||| || |||| |||||||||||||||||  ||||||||||||||||  ||  | ||||||||    
T  27248406 agctccttccaaggacgtatccggggaataccgggttcgagtcccaggaggaacaacgcttggcca--gcgcatgcctctacgcaggagccagattagtc 27248503  T
Q  116 gcccacctttggtggatcagaaact 140  Q
    ||||||||||||| | |||||||||    
T  27248504 gcccacctttggtaggtcagaaact 27248528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 6779195 - 6779302
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| ||| | ||| ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||| ||  ||  ||||||||||| ||||    
T  6779195 ttccaaggacgtacctggagaataccgggttcgattcccagggggaacaacacctggccagtgcgcatgcctctatgcatgagccggattagtcgtccac 6779294  T
Q  122 ctttggtg 129  Q
    ||||||||    
T  6779295 ctttggtg 6779302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 8889000 - 8889123
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||| ||||| ||||||||  |||||||||||||||||  |||||||||||| ||||| ||||||||||| ||||||||  ||  ||||||||||    
T  8889000 agctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctctacgcatgagccggattagtc 8889099  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||||||||||| || |||||    
T  8889100 gtccacctttggtgggtcggaaac 8889123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 36145348 - 36145225
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||||| ||| ||||  ||||||||||||||||| |||||| |||||||||||  |||||||||||||||||| |  ||  ||||||||||    
T  36145348 agctcattccaaggacgtacccggggaataccgggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacatgagccggattagtc 36145249  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||||||| || ||| |||||    
T  36145248 gtccacctttgatgaatcggaaac 36145225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 52950060 - 52950183
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| | ||  |||| |||||||||||| ||||||||||||||||||||||||||||||| |||||| |  ||| | ||||||||    
T  52950060 agctccttccaaggacgtacctggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgactctacacatgaaccagattagtc 52950159  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||||||||||| || |||||    
T  52950160 gtccacctttggtgggtcggaaac 52950183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 53599038 - 53599161
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||  ||  ||||||| ||    
T  53599038 agctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattaatc 53599137  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    |  ||||||| ||||||| |||||    
T  53599138 gttcacctttagtggatcggaaac 53599161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 30317244 - 30317334
Alignment:
Q  49 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||||||| |||||||||||||||||||| || |||||||||||| |||  || |||||||||||||||||||||| || |||||    
T  30317244 ggttcgattctcagagggaacaacgcttggccagtacgaatgcctctacgcacgagccgaattagtcgcccacctttggtgggtcggaaac 30317334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 43458587 - 43458701
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||||||||||||| ||||  ||  ||||| || |||||||| |||| |||| |||||||||||||||||||||||||||||  |||  ||||||    
T  43458587 aagaagctcattccaaggacgtatttggggaatactggattcgattcccaggaggaagaacgcttggccagtgcgcatgcctctacggacgagccggatt 43458686  T
Q  112 agtcgcccacctttg 126  Q
    ||||| |||||||||    
T  43458687 agtcgtccacctttg 43458701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 15732575 - 15732458
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| ||||||||| |||||||||||||||||  | |||||||||| |||||||||||| ||||||||||||| ||     |||||||||| ||     
T  15732575 ttccaaggacgtatccggagaataccgggttcgattcatatggggaacaacacttggccagtgcacatgcctctacgcacgggctagattagtcgctcat 15732476  T
Q  122 ctttggtggatcagaaac 139  Q
    |||||||||||| |||||    
T  15732475 ctttggtggatcggaaac 15732458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 48015180 - 48015083
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||| |||  ||||||||| |||||  |||| |||||| |||||    
T  48015180 aataccgggttcgattcccagtgggaacaacgcttggccagtgcgcaagcctctacgcacgagccggattagtagcccaattttgatggatcggaaac 48015083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 21429278 - 21429402
Alignment:
Q  15 aagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagt 114  Q
    |||||| |||||| || |||||||   |||| ||||||||||| | ||||||||||||| || |||||||||||||||||||||| ||| || || ||||    
T  21429278 aagctccttccaaagacgtatccgaggaatatcgggttcgatttttagggggaacaacgtttagccagtgcgcatgcctctacgcacgagtcagactagt 21429377  T
Q  115 cgcccacctttggtggatcagaaac 139  Q
    || ||||||||||||| || |||||    
T  21429378 cgtccacctttggtgggtcggaaac 21429402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 3574553 - 3574466
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 129  Q
    ||||||| |||| |||| ||||| ||||||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||||    
T  3574553 aataccgagttcaattcccagggagaacaacacttggccagtgcgcatgcctctacgcacgagtcggattagtcgctcaccttaggtg 3574466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 24166428 - 24166551
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||  |||  ||||| ||||||||||| || ||| ||||||| ||||||||||||||||||||||||| |||  | ||||||||    
T  24166428 agctccttccaaggacgtactcggggaatactgggttcgattcccaagggaaacaacgtttggccagtgcgcatgcctctacgcacgagccagattagtc 24166527  T
Q  116 gcccacctttggtggatcagaaac 139  Q
     |||||||||| |||||| |||||    
T  24166528 acccacctttgatggatcggaaac 24166551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 40272464 - 40272381
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| |||||| |||||||||||  |||| |||||||||||  || |||||||||||||||||||||||||||||||||||||    
T  40272464 agctctttccaatgatgtatccggggaatatcgggttcgatttccatggggaacaacgcttggccagtgcgcatgcctctacgc 40272381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 55921012 - 55921135
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| | | ||||  ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||   ||  ||||||| ||    
T  55921012 agctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgtatgagccggattaatc 55921111  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    || |||||||||||| || |||||    
T  55921112 gctcacctttggtgggtcggaaac 55921135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 29588714 - 29588812
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagt 114  Q
    |||||||||||| || ||  |||| |||||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||| |||  |||||||||    
T  29588714 agctcattccaaagacgtgcccgggaaataccgggttcgattcccaggggaaacaaagcttggctagtgcgcatgcctctacgcacgagccggattagt 29588812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 48317408 - 48317302
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    |||||||||||| || |||| || ||||||| || ||||||| ||||| |||||||||||||| ||||| | |||||||||||| |||  ||||||||||    
T  48317408 agctcattccaatgacgtattcgaaaaatactggattcgattttcaggaggaacaacgcttggtcagtgtgtatgcctctacgcacgagccggattagtc 48317309  T
Q  116 gcccacc 122  Q
    |||||||    
T  48317308 gcccacc 48317302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 14858695 - 14858811
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||||||| ||||| ||||||||||||| ||| |||||||| ||| ||||| |||||||||||| |||||||  ||| || ||||| ||| ||||    
T  14858695 ttccaaggatgtacccggagaataccgggttcggttcccagggggatcaa-gcttgaccagtgcgcatgtctctacgtacgagtcagattattcgtccac 14858793  T
Q  122 ctttggtggatcagaaac 139  Q
    ||||| ||| ||||||||    
T  14858794 ctttgatgggtcagaaac 14858811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 16645122 - 16645219
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||||||||| |||||  ||||||||||||||||||| |||||||||||| |  || || |||||||||||||||| |||||| || |||||    
T  16645122 aataccgggttcgattttcaggaagaacaacgcttggccagtgtgcatgcctctacacatgagtctgattagtcgcccacctgtggtgggtcggaaac 16645219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 14124020 - 14124108
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    |||||| |||||||||| |||||||||||||  ||||||||||||||||||||||| | |||  |||||||||||| |||| |||||||    
T  14124020 aataccaggttcgattcccagggggaacaacatttggccagtgcgcatgcctctacacacgagccggattagtcgctcaccattggtgg 14124108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 16450310 - 16450390
Alignment:
Q  48 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggt 128  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||  ||  | ||||||||| |||||||||||    
T  16450310 gggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggt 16450390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 43468351 - 43468431
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacc 122  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||  ||||||||  ||  |||||||||||||||||    
T  43468351 aataccgggttcgattcccagggggaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccacc 43468431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 55005439 - 55005335
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||| || ||||| || ||||||||  |||||||| |||||| ||||||||||| ||| ||||||||||||||||| | | |||||||||||    
T  55005439 agctccttccaaagacgtatctgggaaataccgaattcgattcgcaggggaaacaacgcttgaccattgcgcatgcctctacgcacaagtcggattagtc 55005340  T
Q  116 gccca 120  Q
    |||||    
T  55005339 gccca 55005335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 2559285 - 2559408
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| | ||  |||||||| |||||||   ||| ||||||||||||||||||||||||||||||||||| | |  ||||||| ||    
T  2559285 agctccttccaaggacgtacctggggaataccggattcgatttctaggaggaacaacgcttggccagtgcgcatgcctctacgcacaagccggattactc 2559384  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||||||||||| || |||||    
T  2559385 gtccacctttggtgggtcggaaac 2559408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 33647699 - 33647822
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| || |||||| ||||| ||  ||||||||||||||||  ||||| |||||||||||| ||||||| ||| ||||||||| |||| | ||||||||    
T  33647699 agctcctttcaaggacgtatctggggaataccgggttcgatttccagggagaacaacgcttgaccagtgcacattcctctacgcacgaaccagattagtc 33647798  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    |  || |||||||||||| |||||    
T  33647799 gttcatctttggtggatcggaaac 33647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 17080068 - 17080138
Alignment:
Q  63 ggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    |||||||||||||||||||||||||||||||||||||  ||  |||||||||||| |||||||| ||||||    
T  17080068 ggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacctttgatggatc 17080138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 41163015 - 41162893
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||||||| |||||||| ||||||||  ||| ||||||||| |||||||||||  ||||| |||| ||  ||  || |||||||    
T  41163015 agctccttccaaggacgtatccgggaaataccgagttcgatttccagagggaacaacacttggccagtgtacatgcttctatgcatgagccgaattagtc 41162916  T
Q  116 gcccacctttggtggatcagaaa 138  Q
    ||||||||||| |||||| ||||    
T  41162915 gcccacctttgatggatcggaaa 41162893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 295655 - 295552
Alignment:
Q  26 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 125  Q
    ||||| ||||||||  |||||| | |||||||| ||| || ||||||| ||||||||||||||||||||||||| |||| | ||||||||| ||||| ||    
T  295655 aaggacgtatccggggaataccagattcgattcccagagg-aacaacgtttggccagtgcgcatgcctctacgcacgaaccagattagtcgtccaccgtt 295557  T
Q  126 ggtgg 130  Q
    |||||    
T  295556 ggtgg 295552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 7741929 - 7742016
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 129  Q
    |||| ||||||| | ||||||||| ||||||||||||||||||| ||||||||||||| |||  | ||||||||| ||| ||||||||    
T  7741929 aatatcgggttccaatctcaggggtaacaacgcttggccagtgcacatgcctctacgcacgatccagattagtcgtccatctttggtg 7742016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 13073516 - 13073639
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| | ||| ||||||| ||||||||| || ||||||||| | ||||||||||||||| |||||||||  ||| | ||||||||    
T  13073516 agctccttccaaggacgtacctggagaataccgagttcgattcccatggggaacaatgtttggccagtgcgcatacctctacgcatgaaccagattagtc 13073615  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    |   ||||||||||| || |||||    
T  13073616 gtttacctttggtgggtcggaaac 13073639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 14567963 - 14568038
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgc 117  Q
    |||||| |||||||||||||||| ||| |||||||| ||||||| ||| ||||||||| ||| |||||||||||||    
T  14567963 aataccaggttcgattctcagggagaataacgcttgaccagtgcacatacctctacgcacgagtcggattagtcgc 14568038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 24850759 - 24850677
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||||||||| |||||||| ||||||| | ||| ||| ||||||| |||||| |||| |||||||||||||||||||||    
T  24850759 agctcattccaaggacgtatccgggaaataccagattcaattatcagggg-aacaacacttgaccagtgcgcatgcctctacgc 24850677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 10541020 - 10541116
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||| |||||||||||  |||||| |||||||||||||||||| |||||||||||||| |||  | ||||| ||| ||||||||| |||||| |||||    
T  10541020 aatatcgggttcgatttccaggggaaacaacgcttggccagtgtgcatgcctctacgcacgagccagattaatcg-ccacctttgatggatcggaaac 10541116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 20354639 - 20354720
Alignment:
Q  40 aaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| ||| ||||  ||||| |||||||||||||| |||||||||||||||||||  || |||||||||||| ||||    
T  20354639 aaaataccgagtttgatttccagggagaacaacgcttggctagtgcgcatgcctctacgcatgagtcggattagtcgtccac 20354720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 21192667 - 21192731
Alignment:
Q  65 ggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 129  Q
    ||||||||| | ||||||||||||||||||||||| ||| |||||||| |||||||| |||||||    
T  21192667 ggaacaacgttgggccagtgcgcatgcctctacgcacgagtcggattaatcgcccacatttggtg 21192731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 4736575 - 4736698
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| || |||||||||| |||   |||||||||||| |||||||| || ||||||| ||||||| || |||||||||||||  | |  || |||||||    
T  4736575 agctcctttcaaggatgtacccgaggaataccgggttcaattctcagtggaaacaacgtttggccaatgtgcatgcctctacgtacaagccgaattagtc 4736674  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    ||||||| ||||||| || |||||    
T  4736675 gcccaccgttggtgggtcggaaac 4736698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 14077924 - 14078047
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||| || ||||||||| ||||||| | | ||  |||| |||| | |||| | ||||| ||||||||||| |||||||| ||| |||||||||||    
T  14077924 agctccttctaaagatgtatccagaaaatatcagatttaattcacaggagaaacatcacttggtcagtgcgcatgtctctacgcacgagtcggattagtc 14078023  T
Q  116 gcccacctttggtggatcagaaac 139  Q
     ||||| ||| |||||||||||||    
T  14078024 acccacatttagtggatcagaaac 14078047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 14597974 - 14597916
Alignment:
Q  75 ttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    ||||||||||||||||||||||||| ||||  |||||||||| ||||||||| ||||||    
T  14597974 ttggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatc 14597916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 15829686 - 15829800
Alignment:
Q  25 caaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctt 124  Q
    |||||| ||||||||| |||| |  ||| |||| ||||||| | |||| |||||||||||||||||| |||| ||  ||  ||||||||||  ||||| |    
T  15829686 caaggacgtatccggagaatatccagtttgattttcaggggaatcaacacttggccagtgcgcatgcttctaggcatgagccggattagtcctccaccat 15829785  T
Q  125 tggtggatcagaaac 139  Q
    |||||||||||||||    
T  15829786 tggtggatcagaaac 15829800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 20421784 - 20421834
Alignment:
Q  49 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20421784 ggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacgc 20421834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 35359749 - 35359819
Alignment:
Q  51 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| ||||   | | |||||||||||||||    
T  35359749 ttcgattctcagggggaacaacgtttgaccagtgcgcatgcctcaacgcataagttggattagtcgcccac 35359819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 38168235 - 38168348
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  |||||| ||||||||||  | | ||||||||||||||||||||| |||||||||||||  ||  ||||||||||    
T  38168235 agctccttccaaggacgtacccggggaataccaggttcgattcctaagaggaacaacgcttggccagtgc-catgcctctacgcatgagccggattagtc 38168333  T
Q  116 gcccacctttggtgg 130  Q
    |  ||||||| ||||    
T  38168334 gttcacctttagtgg 38168348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 47682476 - 47682392
Alignment:
Q  54 gattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||||| || |||| ||||||||||| |||| |||||||| |||  ||| ||||||||||||||||||||| || |||||    
T  47682476 gattctcagggg-aataacgtttggccagtgcacatgtctctacgcacgagccgggttagtcgcccacctttggtgggtcggaaac 47682392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 8064905 - 8064825
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacc 122  Q
    ||||| ||||||||||| || |||||| ||| |||| |||||||||||||||||||||  ||  ||||||||||| |||||    
T  8064905 aatactgggttcgattcccaaggggaataacacttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 8064825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 14567276 - 14567331
Alignment:
Q  75 ttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    ||||||||||||||||||||||||| |||  |||||||||||| | ||||||||||    
T  14567276 ttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgg 14567331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 37369127 - 37369052
Alignment:
Q  64 gggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||| ||| |||||| |||||||||||||| ||| |||||| ||||||||||  |||||| ||| |||||    
T  37369127 gggaacaacgtttgtccagtgtgcatgcctctacgcacgagtcggataagtcgcccactattggtgaatcggaaac 37369052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 45721090 - 45721173
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 125  Q
    |||||||||||| ||| ||||||| || || | ||||||| ||||| ||||||||||| | | |||||||||||| ||||||||    
T  45721090 aataccgggttccattttcaggggaaataatgtttggccactgcgcgtgcctctacgcacaagtcggattagtcgtccaccttt 45721173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 4738629 - 4738719
Alignment:
Q  49 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||  |||| |||||||||||| ||||||||||||| ||||||||  ||   | |||||||| ||||||||||||| || |||||    
T  4738629 ggttcgatttccaggaggaacaacgctttgccagtgcgcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaac 4738719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 31588694 - 31588787
Alignment:
Q  48 gggttcgattctcagggggaacaacgct--tggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||| ||||| ||| || |||||||||  ||||||||||||||| ||||||||  ||  |||||||||||| ||| ||||||||||| |||||    
T  31588694 gggtttgattcccagaggaaacaacgctcttggccagtgcgcatgtctctacgcatgagccggattagtcgctcacttttggtggatcggaaac 31588787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 42722511 - 42722406
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| || ||| |||||| ||||  ||||||||||| ||||| |||||| |||||| |||| ||||||||||| |||||| ||  || |||||||||||    
T  42722511 agctcctttcaaagatgtacccggggaataccgggtttgattcccagggg-aacaacacttgaccagtgcgcatacctctatgcatgagtcggattagtc 42722413  T
Q  116 gcccacc 122  Q
    | |||||    
T  42722412 gtccacc 42722406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 26480056 - 26479999
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||| |||||||||| | |||||| ||| |||||||||| |||||||||||||||    
T  26480056 aataccgagttcgattcttaaggggaataacacttggccagtacgcatgcctctacgc 26479999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 33109297 - 33109425
Alignment:
Q  13 agaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgct--tggccagtgcgcatgcctctacgctcgaatcggat 110  Q
    |||||||| ||||||||| ||||||||   ||| ||||||| |||| || |  ||||||||||  |||||||| |||||| |||||||| |||  |||||    
T  33109297 agaagctccttccaaggaggtatccgggggatatcgggttcaattcccatgaagaacaacgctcttggccagtacgcatgtctctacgcacgagccggat 33109396  T
Q  111 tagtcgcccacctttggtggatcagaaac 139  Q
    |||| ||||| |  || ||||||||||||    
T  33109397 tagttgcccatcaatgatggatcagaaac 33109425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 50485971 - 50486044
Alignment:
Q  66 gaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||| ||||||||  ||||||||||||||| |||  ||||||||||||||||| || |||| || |||||    
T  50485971 gaacaacgattggccagaacgcatgcctctacgcacgagccggattagtcgcccaccattagtgggtcggaaac 50486044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 7000498 - 7000613
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||| ||||||||| |||  |||  ||||||| ||||||||| ||||  |||||||||||||||| ||    ||||||||||| |||  | ||||    
T  7000498 aagaagctccttccaaggacgtactcggggaataccgagttcgattcccaggaagaacaacgcttggccaatg----tgcctctacgcacgagccagatt 7000593  T
Q  112 agtcgcccacctttggtggat 132  Q
    |||||| || |||||||||||    
T  7000594 agtcgctca-ctttggtggat 7000613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 18531541 - 18531620
Alignment:
Q  60 cagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||| ||||| ||||||||||||||| | || |||| | ||||| ||| |||||||| |||| || |||||    
T  18531541 cagggggaacaacacttggtcagtgcgcatgcctccatgcacgaaccagattattcgtccaccttttgtgggtcggaaac 18531620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 9548723 - 9548813
Alignment:
Q  50 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 140  Q
    ||||||||||||  | |||||||||||||  ||||||||||||||| | | ||||   |||||||||  |||| |||||||||| ||||||    
T  9548723 gttcgattctcaatgagaacaacgcttggttagtgcgcatgcctctgcacacgaactagattagtcgttcaccgttggtggatcggaaact 9548813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 13436816 - 13436858
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtg 84  Q
    ||||||||||||||||| ||| ||||||||||||||| |||||    
T  13436816 aataccgggttcgattcccagagggaacaacgcttggtcagtg 13436858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 139
Target Start/End: Complemental strand, 24479092 - 24478994
Alignment:
Q  41 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||| |||| ||| | ||||| ||||||||||| ||| | | || |||||||| | |||  ||||||| ||||||||| |||||||||| |||||    
T  24479092 aaataccgagttcaatttttaggggaaacaacgcttgaccattacacacgcctctacacacgagccggattaatcgcccaccgttggtggatcggaaac 24478994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 139
Target Start/End: Complemental strand, 48834811 - 48834710
Alignment:
Q  37 cggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcaga 136  Q
    |||| ||||||||||||||||  |||||| || ||  || ||||||||| ||||||||||  |  || |||||||||||||| ||||||||||| || ||    
T  48834811 cggagaataccgggttcgatttccagggg-aataatactaggccagtgcacatgcctctatacatgagtcggattagtcgcctacctttggtgggtcgga 48834713  T
Q  137 aac 139  Q
    |||    
T  48834712 aac 48834710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 6032773 - 6032653
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  |||||||||||| ||| ||||| || ||   ||||| ||||||| ||||||||||||   ||  ||||||||||    
T  6032773 agctccttccaaggacgtacccggggaataccgggttcaattttcaggaggtac---gcttgaccagtgctcatgcctctacgaatgagccggattagtc 6032677  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | | ||||||||||| || |||||    
T  6032676 gtctacctttggtgggtcggaaac 6032653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 15840014 - 15839965
Alignment:
Q  70 aacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgccc 119  Q
    |||| |||||||||||||||||||||||||  ||  ||||||||||||||    
T  15840014 aacgtttggccagtgcgcatgcctctacgcatgagccggattagtcgccc 15839965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 13552092 - 13552148
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaac 72  Q
    ||||| ||||||| | ||||||||  |||| ||||||||||||||||| ||||||||    
T  13552092 agctccttccaagcacgtatccggggaatatcgggttcgattctcaggaggaacaac 13552148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 26237523 - 26237431
Alignment:
Q  48 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 140  Q
    |||||||||||||||||| ||||||| |||  ||||||| ||| || |||||  || |||||||||| | ||||| ||| ||| || ||||||    
T  26237523 gggttcgattctcaggggaaacaacgtttgatcagtgcgtatgtctttacgcatgagtcggattagtagtccaccattgatgggtcggaaact 26237431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 75)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 10026749 - 10026621
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||  ||||||||||    
T  10026749 agctccttccaaggacgtactcggaaaataccgggttcgattctcagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtc 10026650  T
Q  116 gcccacctttggtggatcagaaactagtg 144  Q
    | ||||||||||||| || ||||||||||    
T  10026649 gaccacctttggtgggtcggaaactagtg 10026621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 38962736 - 38962860
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    |||||||| |||||| ||||||||  |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  38962736 agctcatttcaaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaaccggattagtc 38962835  T
Q  116 gcccacctttggtggatcagaaact 140  Q
    | ||||||||||||| |||||||||    
T  38962836 gtccacctttggtgggtcagaaact 38962860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 25540537 - 25540414
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||||| ||||| ||  ||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  25540537 agctcattccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtc 25540438  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||||||||||| || |||||    
T  25540437 gtccacctttggtgggtcggaaac 25540414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 42770784 - 42770670
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||||| ||    
T  42770784 agctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgcgcatgcctcttcgcacgagccggattaatc 42770685  T
Q  116 gcccacctttggtgg 130  Q
    | |||||||||||||    
T  42770684 gtccacctttggtgg 42770670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 38005375 - 38005499
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| |  ||  ||||||||||    
T  38005375 agctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctctacacatgagccggattagtc 38005474  T
Q  116 gcccacctttggtggatcagaaact 140  Q
    |||||||||||||||||| ||||||    
T  38005475 gcccacctttggtggatcggaaact 38005499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 8410104 - 8410215
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||  ||||||||||    
T  8410104 agctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtc 8410203  T
Q  116 gcccacctttgg 127  Q
    |||||| |||||    
T  8410204 gcccacttttgg 8410215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 10823033 - 10823156
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  ||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  10823033 agctccttccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtc 10823132  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    |||||||||| |||| || |||||    
T  10823133 gcccaccttttgtgggtcggaaac 10823156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 331474 - 331588
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||  ||  ||||||||||    
T  331474 agctctttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcttctacgcatgagccggattagtc 331573  T
Q  116 gcccacctttggtgg 130  Q
    |||||||||||||||    
T  331574 gcccacctttggtgg 331588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 44139463 - 44139580
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||||| ||| ||  ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||    
T  44139463 ttccaaggatgcatctggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcgtgcctctacgcacgagccggattagtcgcccac 44139562  T
Q  122 ctttggtggatcagaaac 139  Q
    |  |||||| || |||||    
T  44139563 caatggtgggtcggaaac 44139580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 10046609 - 10046482
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||| | ||||||||| |||||||||||||||||||| ||| ||||||| ||| | |||||||||||||||||||  ||  ||||||||||    
T  10046609 agctccttccaagaacgtatccggagaataccgggttcgattctcaagggaaacaacgtttgac-agtgcgcatgcctctacgcatgagccggattagtc 10046511  T
Q  116 gcccacctttggtggatcagaaactagtg 144  Q
    | ||||||||||||| || ||||||||||    
T  10046510 gaccacctttggtgggtcggaaactagtg 10046482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 34722685 - 34722776
Alignment:
Q  48 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||| ||||||||||||| |||||| |||| |||||||| |||  ||||||||||||||||||||| ||||||||||||    
T  34722685 gggttcgattctcagggagaacaacgcttggtcagtgcacatgtctctacgcacgagccggattagtcgcccacctttgatggatcagaaac 34722776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 41032010 - 41031911
Alignment:
Q  45 accgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaactagtg 144  Q
    |||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| |||  |||||||||| |||||||||||||| || ||||| ||||    
T  41032010 accgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtg 41031911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 6358288 - 6358170
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||||||| ||||| ||||||||  |||||| | |||||||  ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||    
T  6358288 aagaagctcattcaaaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggatt 6358189  T
Q  112 agtcgcccacctttggtgg 130  Q
    ||||| ||||| |||||||    
T  6358188 agtcgtccaccattggtgg 6358170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 130
Target Start/End: Complemental strand, 45263783 - 45263686
Alignment:
Q  33 tatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    |||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||  ||||||| |||| || |||||||||    
T  45263783 tatccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgctcatctttggtgg 45263686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 3849044 - 3848937
Alignment:
Q  19 tcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcc 118  Q
    ||||| |||||| ||||| ||| |||||||||||||||| ||||||| ||||||| |||||||| ||||||| |||||||| ||| ||||||||||||      
T  3849044 tcatttcaaggacgtatctggagaataccgggttcgattatcaggggaaacaacgtttggccagggcgcatgtctctacgcacgagtcggattagtcgtt 3848945  T
Q  119 cacctttg 126  Q
    ||||||||    
T  3848944 cacctttg 3848937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 7787055 - 7787146
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    ||||||||||||||||  ||||||||||||  |||||||||| ||||||||||||||| |||  ||||||||||||||| ||||||||||||    
T  7787055 aataccgggttcgatttccagggggaacaatacttggccagtacgcatgcctctacgcacgagccggattagtcgcccatctttggtggatc 7787146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 18902663 - 18902540
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||  |||  ||||||||||||||||| || ||||||||||||||| ||||||||| || |||||||| |||  | ||||||||    
T  18902663 agctccttccaaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgcgcgtgtctctacgcacgagccagattagtc 18902564  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    ||||||||||||||| || |||||    
T  18902563 gcccacctttggtgggtcggaaac 18902540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 41220608 - 41220691
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  41220608 agctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgc 41220691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 3644020 - 3643906
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||||| ||||||||  ||||||||||| ||||   | | |||||||||||||||||||||||||||||||||||  ||   |||||||||    
T  3644020 agctcattccaaggacgtatccggggaataccgggtttgatttctacgaggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtc 3643921  T
Q  116 gcccacctttggtgg 130  Q
    | |||||||||||||    
T  3643920 gtccacctttggtgg 3643906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 19976940 - 19976830
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  |||||||||||||||| |||||||||| |||| |||| ||||||||||| ||||||||   | ||| |||||||    
T  19976940 agctctttccaaggacgtatccggggaataccgggttcgattttcagggggaataacgtttggtcagtgcgcatgtctctacgcataagtcgaattagtc 19976841  T
Q  116 gcccacctttg 126  Q
    |||||||||||    
T  19976840 gcccacctttg 19976830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 22593108 - 22593221
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  ||||| | ||||||||| |||||||||||||| |||||||||||||||||||||||||  ||  ||||||||||    
T  22593108 agctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgcgcatgcctctacgcatgagccggattagtc 22593206  T
Q  116 gcccacctttggtgg 130  Q
    | |||||||||||||    
T  22593207 gtccacctttggtgg 22593221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 37560142 - 37560256
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||| ||||||||| ||| |||   |||||| ||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||  ||||||    
T  37560142 aagaagctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgcatgcctctacgcacgagccggatt 37560241  T
Q  112 agtcgcccacctttg 126  Q
    | ||| |||||||||    
T  37560242 aatcgtccacctttg 37560256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 12455309 - 12455406
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||  |||||| |||||||||| |||||||||||||||||||||| |||  |||||||||||| |||| ||||||| || |||||    
T  12455309 aataccgggttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaac 12455406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 35946712 - 35946835
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||| ||||| ||||||||  ||||||| |||||||||  ||||| ||||||||||||||| || |||||||||||||| |||  ||||||||||    
T  35946712 agctcattctaaggacgtatccggggaataccgagttcgattcctagggg-aacaacgcttggccattgtgcatgcctctacgcacgagccggattagtc 35946810  T
Q  116 gcccacctttggtggatcagaaact 140  Q
    | ||||| ||||||| || ||||||    
T  35946811 gtccaccattggtgggtcggaaact 35946835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 7747247 - 7747370
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  |||||||||||||||||  ||| ||||||||| |||||||||| ||||||||||||||  ||  ||||||||||    
T  7747247 agctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtc 7747346  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    |  ||||||| |||| || |||||    
T  7747347 gttcacctttagtgggtcggaaac 7747370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 10669593 - 10669688
Alignment:
Q  44 taccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||||| |||||||| ||| |||||||| |||  |||||||||||| || |||||    
T  10669593 taccgggtttgattcccagggagaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttggtgggtcggaaac 10669688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 11069851 - 11069974
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||||| ||| ||||  |||||| ||||||||||  ||||||||||||| ||||||||||||||| ||||||||| |||   | |||||||    
T  11069851 agctcattccaaggacgtacccggggaataccaggttcgattccgagggggaacaacgtttggccagtgcgcatacctctacgcacgagctgaattagtc 11069950  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||| ||||||| || |||||    
T  11069951 gtccaccgttggtgggtcggaaac 11069974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 21286417 - 21286500
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||| |||| | ||||||||||| |||||||||||||||||||||    
T  21286417 agctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgcatgcctctacgc 21286500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 34346420 - 34346297
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||||| ||| | ||  ||||| ||||| |||| |||||||||||||| ||||||||||| ||||||||||||||  || || ||||| ||    
T  34346420 agctcattccaaggacgtacctggggaatactgggtttgattatcagggggaacaacacttggccagtgtgcatgcctctacgcatgagtcagattaatc 34346321  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    || |||||||||||| || |||||    
T  34346320 gctcacctttggtgggtcggaaac 34346297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 39807022 - 39806895
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    |||| |||| || |||||| ||| ||||  ||||||||||||||||| || | | ||||||| ||||||||||||||||||||||| | ||| |||||||    
T  39807022 aagatgctccttacaaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctctacacacgagtcggatt 39806923  T
Q  112 agtcgcccacctttggtggatcagaaac 139  Q
    ||||  ||||||||||||| ||| ||||    
T  39806922 agtcatccacctttggtggttcataaac 39806895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 44945567 - 44945689
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||  |||| ||||| ||||| ||||| ||| || ||||||||||||  ||||||||||||||||||| |||  ||||||||||    
T  44945567 agctccttccaaggacgtactcggagaatactgggtttgattcccagagg-aacaacgcttggatagtgcgcatgcctctacgcacgagccggattagtc 44945665  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    |||||||||| ||||||| |||||    
T  44945666 gcccacctttagtggatcggaaac 44945689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 2550841 - 2550955
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| || |||||| ||||||||  |||| |||||||||||| |||| |||||||| ||| ||||||||||||| ||||||||  ||  ||||||||||    
T  2550841 agctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgcgcatgtctctacgcatgagccggattagtc 2550940  T
Q  116 gcccacctttggtgg 130  Q
    |||||| ||||||||    
T  2550941 gcccacttttggtgg 2550955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 3811798 - 3811701
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||| |||||||||||| ||| ||||||||| ||||| || |||||||||||||||||  ||  ||||||| ||||||||||||||||| ||||||||    
T  3811798 aatatcgggttcgattcccagagggaacaacacttggtcaatgcgcatgcctctacgcatgagccggattactcgcccacctttggtgggtcagaaac 3811701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 20612669 - 20612588
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagg-gggaacaacgcttggccagtgcgcatgcctcta 96  Q
    ||||| |||||||| ||||| |||  |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  20612669 agctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtgcgcatgcctcta 20612588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 28616486 - 28616389
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||| ||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| |||  | ||||||||||||| |||| |||| ||||||||    
T  28616486 aatatcgggttcgattttcagggggaataacacttgggcagtgcgcatgcctctacgcacgagccagattagtcgcccatctttagtgggtcagaaac 28616389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 9360879 - 9360767
Alignment:
Q  18 ctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgc 117  Q
    ||||||||||||| ||| ||||  |||||| |||||||||   || || ||||||| ||||||||||||||||||||||||| |||  || |||||||||    
T  9360879 ctcattccaaggacgtacccggggaataccaggttcgattactagaggaaacaacgtttggccagtgcgcatgcctctacgcacgagccgaattagtcgc 9360780  T
Q  118 ccacctttggtgg 130  Q
    |||||||| ||||    
T  9360779 ccacctttagtgg 9360767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 15234194 - 15234111
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| ||||||||| ||| ||||  |||||  |||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  15234194 agctccttccaaggacgtacccggggaatactaggttcgattctcagggggaacaacacttgaccagtgcgcatgcctctacgc 15234111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 18649163 - 18649045
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||  ||||||||||| || | |  |||||||| ||||||||||||| |||||||   |||| ||||||||||||||||||||  || |||||||    
T  18649163 aagaagctgcttccaaggatgcattcagggaataccggattcgattctcaggaggaacaatatttgggcagtgcgcatgcctctacgcatgagtcggatt 18649064  T
Q  112 agtcgcccacctttggtgg 130  Q
    |||||| ||| ||||||||    
T  18649063 agtcgctcacttttggtgg 18649045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 39201615 - 39201509
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaacta 141  Q
    |||||||  ||||||||||||||||||||| | |||||||||| ||||||||||||||  ||  |||||||||||  |||||||||||| || |||||      
T  39201615 aataccgaattcgattctcagggggaacaatgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcacctttggtgggtcggaaaccg 39201516  T
Q  142 gtgaaaa 148  Q
    |||||||    
T  39201515 gtgaaaa 39201509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 13026538 - 13026421
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| |||||| |  |||| ||||||||||| ||||| ||||||| | |||||||||||||||||||||||||  ||  ||||||||||  ||||    
T  13026538 ttccaaggacgtatccagggaatatcgggttcgattatcaggaggaacaatgattggccagtgcgcatgcctctacgcatgagccggattagtcagccac 13026439  T
Q  122 ctttggtggatcagaaac 139  Q
     |||||| | ||||||||    
T  13026438 ttttggtaggtcagaaac 13026421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 14169736 - 14169619
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| |||| |||  |||| |||||||||||||| ||||||||||| |||| |||||||||||| ||||||||  ||  ||||||||||| | ||    
T  14169736 ttccaaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctac 14169637  T
Q  122 ctttggtggatcagaaac 139  Q
    | ||||||| || |||||    
T  14169636 cattggtgggtcggaaac 14169619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 21180447 - 21180346
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||| | |||||||| |||||||| || || ||||||| |||||||||||| ||||||||||||| |||  ||||||||||    
T  21180447 agctccttccaaggacgtacccgaagaataccggattcgattcccatggagaacaacacttggccagtgcacatgcctctacgcacgagccggattagtc 21180348  T
Q  116 gc 117  Q
    ||    
T  21180347 gc 21180346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 27725951 - 27726036
Alignment:
Q  54 gattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| | |  |||||||||||||||||  |||||| || |||||    
T  27725951 gattctcaggaggaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaac 27726036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 16034916 - 16035016
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| |||||||   |||||||||||||||| ||||| ||||||||||||| |||||| |||||||| ||||  |||  |||||||||||| |||    
T  16034916 ttccaaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacgtacgagccggattagtcgctcac 16035015  T
Q  122 c 122  Q
    |    
T  16035016 c 16035016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 34356185 - 34356259
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 96  Q
    ||||||||| ||||| ||  ||||||||||||||||  ||||||||||||| ||||| |||||||||||||||||    
T  34356185 ttccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgcgcatgcctcta 34356259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 13513978 - 13514039
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttg 77  Q
    ||||| ||||||||||||||||||||||||||||  ||||||| ||| ||||||||||||||    
T  13513978 agctctttccaaggatgtatccggaaaataccggactcgattcacagagggaacaacgcttg 13514039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 16325602 - 16325691
Alignment:
Q  50 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||||||  ||  | ||||||||| ||||| ||||||| || |||||    
T  16325602 gttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaac 16325691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 24179575 - 24179655
Alignment:
Q  49 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||||||||||  ||  ||||||||||| ||| |||||||||    
T  24179575 ggttcgattctcagggg-aacaacgtttggccagtgcacatgcctctacgcatgagccggattagtcgtccatctttggtgg 24179655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 26805306 - 26805383
Alignment:
Q  53 cgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    ||||| ||||| | ||| ||| ||||||||||| |||||||||||||  || ||||||||||||||||||||||||||    
T  26805306 cgattttcaggagaaacgacgtttggccagtgcacatgcctctacgcatgagtcggattagtcgcccacctttggtgg 26805383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 29653625 - 29653713
Alignment:
Q  41 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    ||||||||| |||||||  |||||  |||||||||||| |||||||||||||||||||| |||  || |||||||| |||||||||||||    
T  29653625 aaataccggattcgatttccagggaaaacaacgcttgggcagtgcgcatgcctctacgcacgagccgaattagtcg-ccacctttggtgg 29653713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 2528445 - 2528393
Alignment:
Q  45 accgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 97  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  2528445 accgggttcgattcccagggggaacaacgcttggtcagtgtgcatgcctctac 2528393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 2149319 - 2149244
Alignment:
Q  25 caaggatgtatccggaaaataccgg-gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||||||||||| ||  |||||||| ||||||||| | ||||||| |||| |||||||||||||||||||||||||    
T  2149319 caaggatgtatctggggaataccggagttcgattcactgggggaataacgtttggccagtgcgcatgcctctacgc 2149244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 12864197 - 12864320
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||| || |||| |||  |||||||| |||||||  ||||||||||||| ||||| |||||||||||||||| |||  ||  | ||||||||    
T  12864197 agctccttccaatgacgtattcggggaataccggattcgatttccagggggaacaacacttggtcagtgcgcatgcctctgcgcatgagccagattagtc 12864296  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||| ||||||| || |||||    
T  12864297 gtccaccattggtgggtcggaaac 12864320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 133
Target Start/End: Complemental strand, 14853491 - 14853381
Alignment:
Q  25 caaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctc--gaatcggattagtcgcccacc 122  Q
    |||||||||||||||  |||||| | ||||||| ||||||||||||||  |||||||||||| ||||||||   |||  || |||||||||||| ||| |    
T  14853491 caaggatgtatccggggaataccagattcgattttcagggggaacaacttttggccagtgcgtatgcctctctactcatgagtcggattagtcgtccatc 14853392  T
Q  123 tttggtggatc 133  Q
    ||| |||||||    
T  14853391 tttagtggatc 14853381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 37805016 - 37804941
Alignment:
Q  24 ccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||| ||| |||  ||||||||| |||||||| ||||||||| |||||||||| |||||||||||| ||||||    
T  37805016 ccaaggacgtacccgagaaataccggattcgattcacagggggaataacgcttggctagtgcgcatgccgctacgc 37804941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 29422188 - 29422310
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| || |||||| ||| ||||  ||||| ||||||||||  ||| ||||||||| |||||||| || |||| ||| ||||| |||  ||||||||||    
T  29422188 agctcctttcaaggacgtacccggggaatactgggttcgatttccagagggaacaacacttggccaatgagcatacctttacgcacgagccggattagtc 29422287  T
Q  116 gcccacctttggtggatcagaaa 138  Q
    | ||||||||| |||||| ||||    
T  29422288 gtccacctttgatggatcggaaa 29422310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 15079462 - 15079539
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||| ||| ||||  ||||| ||||||||||  |||||||||||||||||| |||||| ||||| ||||||||    
T  15079462 ttccaaggacgtacccggggaatacagggttcgatttccagggggaacaacgcttgaccagtgtgcatgactctacgc 15079539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 25604574 - 25604650
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||||| ||||||||||||||||||||| ||||||| ||  ||||||||||| ||| |||||  ||||||||||||||    
T  25604574 ttccaaagatgtatccggaaaataccggattcgatt-tccaggggaacaacgtttgaccagtatgcatgcctctacgc 25604650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 25549727 - 25549818
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    ||||| |||||||||||| ||||  ||||||  ||||| ||||| ||||||||||||| |||  ||||||||||| ||| ||||| ||||||    
T  25549727 aatactgggttcgattcttagggaaaacaacatttggctagtgcacatgcctctacgcacgagccggattagtcgtccatctttgatggatc 25549818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 28525542 - 28525479
Alignment:
Q  62 gggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 125  Q
    |||| |||||| |||||||||||||||||||||||||| |||  ||||||||||  ||||||||    
T  28525542 ggggaaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcatccaccttt 28525479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 41187682 - 41187765
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| ||| ||||| ||||| | | |||||||||||||||| | |||||||||||| |||| ||||||  |||||||||||||    
T  41187682 agctccttctaaggacgtatctgaagaataccgggttcgattatgagggggaacaacacttgaccagtgtccatgcctctacgc 41187765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 43303399 - 43303345
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 96  Q
    |||| ||||||||||| ||| ||||||||||||||| ||||| ||||||||||||    
T  43303399 aatatcgggttcgattttcaaggggaacaacgcttgaccagtacgcatgcctcta 43303345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 5035277 - 5035370
Alignment:
Q  32 gtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 125  Q
    ||||||||||||||  ||||||||||| |||    ||||| ||||| |||||||||||| |||||||| |||| ||||||| ||  ||||||||    
T  5035277 gtatccggaaaatattgggttcgattcccagaaaaaacaatgcttgaccagtgcgcatgtctctacgcacgaaccggattaatcatccaccttt 5035370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 13104908 - 13104875
Alignment:
Q  66 gaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||||||||||||||||||||||||||||    
T  13104908 gaacaacgcttggccagtgcgcatgcctctacgc 13104875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 33005751 - 33005807
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||||||  ||| |||||| |||||| ||||||||||||||||||||||||||    
T  33005751 aataccgggttctgttcccagggg-aacaacacttggccagtgcgcatgcctctacgc 33005807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 41187822 - 41187923
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||||||   |||||||  ||| ||||| |||   ||||||||||| |||||||||||||||||||||  ||  ||||||||||    
T  41187822 agctccttccaaggacgtatccgaggaataccgaattcaattcttaggaaaaacaacgcttgaccagtgcgcatgcctctacgcatgagacggattagtc 41187921  T
Q  116 gc 117  Q
    ||    
T  41187922 gc 41187923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 31740868 - 31740777
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    |||||| | ||||||| ||||||   ||||||||||| ||||||| |||| |||| || ||| || || |||||| ||||||||||||||||    
T  31740868 aataccagattcgattatcagggattacaacgcttggtcagtgcgaatgcttctaggcacgagtcagactagtcgtccacctttggtggatc 31740777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 33634546 - 33634455
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    ||||||||||||||||| ||| || || |||| || ||||||||||||||| || ||| |||  || |||||||  | ||||||||||||||    
T  33634546 aataccgggttcgattcccagaggaaataacgtttagccagtgcgcatgccgctgcgcacgagccgaattagtcatctacctttggtggatc 33634455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 20116696 - 20116622
Alignment:
Q  65 ggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||| |||||| |||||||||||||||||  ||  |||||||| || ||||||||| ||| || |||||    
T  20116696 ggaacaacgcatggccaatgcgcatgcctctacgcatgagccggattagccgtccacctttgatgggtcggaaac 20116622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 10106577 - 10106670
Alignment:
Q  32 gtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 125  Q
    |||||||  ||||||||| ||||||||||||  |||||||||||||   || |||||||| |||| ||   | |||||||||||| ||||||||    
T  10106577 gtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttctatgcataagtcggattagtcgtccaccttt 10106670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 16813251 - 16813186
Alignment:
Q  63 ggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggt 128  Q
    ||||||||||| ||| ||||| |||||||||||| || |||  ||||||||||| ||| |||||||    
T  16813251 ggggaacaacgtttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttggt 16813186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 16852530 - 16852465
Alignment:
Q  63 ggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggt 128  Q
    ||||||||||| ||| ||||| |||||||||||| || |||  ||||||||||| ||| |||||||    
T  16852530 ggggaacaacgtttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttggt 16852465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 29421302 - 29421383
Alignment:
Q  63 ggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaactagtg 144  Q
    |||||||||||||||| ||||| ||||||||||||||  || ||| | |||||| | || |||||| |||| ||||| ||||    
T  29421302 ggggaacaacgcttgggcagtgagcatgcctctacgcatgagtcgaagtagtcgtctacatttggtagatcggaaaccagtg 29421383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 30721942 - 30721885
Alignment:
Q  62 gggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgccc 119  Q
    ||||||||||| ||||| ||||||||||| |||||||   || |||||||||||||||    
T  30721942 gggggaacaacacttggtcagtgcgcatgtctctacgtatgagtcggattagtcgccc 30721885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 40969022 - 40968965
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||||||||||  |||||  ||||||| |||| ||||||| ||||||||||||    
T  40969022 aataccgggttcgatttccagggaaaacaacgtttggtcagtgcgaatgcctctacgc 40968965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 12642 - 12769
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||| ||||||||| ||  ||||  |||||||||||||||||  ||| |||||||||||||||||||| |||||||||||||| |||| ||||||    
T  12642 aagaagctccttccaaggacgtgcccggggaataccgggttcgattcagaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggatt 12741  T
Q  112 agtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||| ||| ||||||||    
T  12742 agtcgcccacctttgatgggtcagaaac 12769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 1605917 - 1606040
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||| |||||| |||||||||  |||||||||||||||||||||||||| |||||||||| ||| ||  ||||||||||    
T  1605917 agctccttccaaggacgtacccggagaatacctggttcgatttccagggggaacaacgcttggccagtgcacatgcctctaggcttgagccggattagtc 1606016  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    |||||||||||||||||| |||||    
T  1606017 gcccacctttggtggatcggaaac 1606040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 34659202 - 34659315
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||| ||||||| ||||  |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||  ||||||||||    
T  34659202 agctccttccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgcatgcctctacgcacgagccggattagtc 34659301  T
Q  116 gcccacctttggtg 129  Q
    ||||||| ||||||    
T  34659302 gcccaccattggtg 34659315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 38578994 - 38578877
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| ||| ||||  |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||    
T  38578994 ttccaaggacgtacccggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccac 38578895  T
Q  122 ctttggtggatcagaaac 139  Q
    ||||||||| || |||||    
T  38578894 ctttggtgggtcggaaac 38578877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 22993500 - 22993377
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  |||| ||||||||||||  ||| |||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  22993500 agctccttccaaggacgtacccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtc 22993401  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    || |||||||||||| ||||||||    
T  22993400 gctcacctttggtgggtcagaaac 22993377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 17748509 - 17748392
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| |||| |||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||  ||||||||||| ||||    
T  17748509 ttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgtacgagccggattagtcgtccac 17748410  T
Q  122 ctttggtggatcagaaac 139  Q
    ||||| ||| || |||||    
T  17748409 ctttgttgggtcggaaac 17748392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 22973943 - 22974066
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||  |||  ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||  ||  | ||||||||    
T  22973943 agctccttccaaggacgtactcggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtctacgcatgagccagattagtc 22974042  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||||||||||| ||||||||    
T  22974043 gtccacctttggtgggtcagaaac 22974066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 48804659 - 48804782
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||  ||  ||||||||||    
T  48804659 agctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 48804758  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||| ||||||| || |||||    
T  48804759 gtccaccattggtgggtcggaaac 48804782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 13095834 - 13095957
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| || |||||| ||| ||||  |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||    
T  13095834 agctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 13095933  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    || |||||||||||| || |||||    
T  13095934 gctcacctttggtgggtcggaaac 13095957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 18785641 - 18785768
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||| ||||||||| ||| ||||  |||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||  |||  |||||    
T  18785641 aagaagctccttccaaggacgtacccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgaactggatt 18785740  T
Q  112 agtcgcccacctttggtggatcagaaac 139  Q
    |||||  ||||| |||||| || |||||    
T  18785741 agtcgttcacctctggtgggtcggaaac 18785768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 1797436 - 1797553
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||||||   ||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||| |||  |||| |||||    
T  1797436 agctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgcatgtctctacgcacgagccggactagtc 1797535  T
Q  116 gcccacctttggtggatc 133  Q
    | ||| ||||| ||||||    
T  1797536 gtccatctttgatggatc 1797553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 43862105 - 43861988
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||| || ||||| ||  ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||  ||  ||||||||||    
T  43862105 agctctttccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtc 43862006  T
Q  116 gcccacctttggtggatc 133  Q
       |||||||||||||||    
T  43862005 attcacctttggtggatc 43861988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 10048009 - 10047926
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  10048009 agctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgc 10047926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 47341852 - 47341935
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||||||||| ||| ||||  ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  47341852 agctcattccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgc 47341935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 16802099 - 16802213
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  |||||||| ||||||||| ||| ||||||||| |||||||||||| |||||||||||| |||  ||||||||||    
T  16802099 agctccttccaaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgcgtatgcctctacgcacgagccggattagtc 16802198  T
Q  116 gcccacctttggtgg 130  Q
    || |||| |||||||    
T  16802199 gctcaccattggtgg 16802213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 5069938 - 5069825
Alignment:
Q  26 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 125  Q
    ||||| ||| |||| |||||||||||||||||  |||| |||||||||||| || |||| |||||||||||||| | |  ||||||||||||||||||||    
T  5069938 aaggacgtacccgggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgcatgcctctacgcacaagccggattagtcgcccaccttt 5069839  T
Q  126 ggtggatcagaaac 139  Q
    ||||| || |||||    
T  5069838 ggtgggtcggaaac 5069825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 21190913 - 21190809
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||||||  |||||||  |||||||||||||||||  ||| ||| ||||||||||| ||||||||||||||||||| ||| || ||||||||    
T  21190913 agctccttccaaggacttatccggggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgcacgagtcagattagtc 21190814  T
Q  116 gccca 120  Q
    |||||    
T  21190813 gccca 21190809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 43346912 - 43346784
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||| || ||||| ||  |||||||||||| ||||||| |||||||||| ||||||| |||||||||||||||||  |||  ||||||||||    
T  43346912 agctccttccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgcgcatgcctctacgtacgagccggattagtc 43346813  T
Q  116 gcccacctttggtggatcagaaactagtg 144  Q
    || || ||||||||| || ||||| ||||    
T  43346812 gctcatctttggtgggtcggaaaccagtg 43346784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 49142776 - 49142692
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 126  Q
    |||||||||||||||||  |||||||||||||||| |||||||| ||||||||||||| |||  ||||||||| |||||||||||    
T  49142776 aataccgggttcgattcctagggggaacaacgcttagccagtgcacatgcctctacgcacgagccggattagttgcccacctttg 49142692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 27028255 - 27028378
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||| | ||| | || ||||||| |||||||||  ||||||||||||| |||||||||||||||||||||||| |  ||   |||||||||    
T  27028255 agctcattccaagaacgtacctgggaaataccaggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacacatgagctggattagtc 27028354  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    || |||||||||||| || |||||    
T  27028355 gctcacctttggtgggtcggaaac 27028378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 43925488 - 43925571
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  43925488 agctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgc 43925571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 36619361 - 36619259
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaacta 141  Q
    ||||||||||||||||| ||||||||||||| |||| |||||| ||||||||||||||  ||  ||||||||||| ||||| ||||||| ||| |||| |    
T  36619361 aataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcaaaaacca 36619262  T
Q  142 gtg 144  Q
    |||    
T  36619261 gtg 36619259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 3353427 - 3353523
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||| |||| |||||||||||||  ||||||  ||||||||||||||||||||||||| |||  ||||||||||| ||||||||| ||||||||||||    
T  3353427 aatatcgggatcgattctcaggga-aacaacatttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttgatggatcagaaac 3353523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 23658189 - 23658278
Alignment:
Q  50 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||| | |||  ||||||||||| ||| ||||||||| ||||||||    
T  23658189 gttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacacacgagccggattagtcgtccatctttggtgggtcagaaac 23658278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 26423394 - 26423306
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| | ||||||||||| |||  | |||||||||  ||||||||||||    
T  26423394 aataccgggttcgattcccaggggaaacaacgcttggccagtgcacctgcctctacgcacgagccagattagtcgttcacctttggtgg 26423306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 28396277 - 28396170
Alignment:
Q  32 gtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgga 131  Q
    |||||||| ||||| ||||||| |||||||||||||||||||||| ||  |||||||||||| |||||  ||  ||||||||||| | |||||||||||     
T  28396277 gtatccgggaaatatcgggttcaattctcagggggaacaacgcttagctggtgcgcatgcctttacgcatgagccggattagtcgtctacctttggtggg 28396178  T
Q  132 tcagaaac 139  Q
    || |||||    
T  28396177 tcggaaac 28396170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 42210395 - 42210272
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||||||   |||||||| |||||||| ||| |  ||||||| ||||||||||||||||||||||||| |||  ||||||| ||    
T  42210395 agctctttccaaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtgcgcatgcctctacgcacgagccggattaatc 42210296  T
Q  116 gcccacctttggtggatcagaaac 139  Q
     |||||| ||||||| || |||||    
T  42210295 acccaccgttggtgggtcggaaac 42210272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 140
Target Start/End: Original strand, 14535293 - 14535391
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 140  Q
    |||||||||||  ||| |||||| ||||||| ||||||||||| |||||||||||||| |||   |||||||||||||||| ||| ||| |||||||||    
T  14535293 aataccgggtttcattttcagggagaacaacacttggccagtgtgcatgcctctacgcacgagctggattagtcgcccaccattgatgggtcagaaact 14535391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 41945497 - 41945562
Alignment:
Q  64 gggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 129  Q
    ||||| |||||||||||||||||||||||||||||| |||  ||||||||||| ||||||||||||    
T  41945497 gggaataacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtg 41945562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 27875195 - 27875107
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    |||||||| |||||||| ||||||||| ||| |||||||||||| |||||||||||||  || ||| |||||||| |||||||| ||||    
T  27875195 aataccggattcgattcccagggggaataacacttggccagtgcacatgcctctacgcatgagtcgcattagtcgtccacctttagtgg 27875107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 30827294 - 30827378
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 126  Q
    |||||| ||||||||| |||||| ||||||| |||||||||| ||||||||||||||| |||  ||||||||||| | |||||||    
T  30827294 aataccaggttcgattttcagggagaacaacacttggccagtacgcatgcctctacgcacgagccggattagtcgtctacctttg 30827378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 21530724 - 21530847
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| | ||  ||||| ||||| ||||| ||||||||||||| ||||| |||||| ||||||||||||| |||  || |||| ||    
T  21530724 agctccttccaaggacgtacctggggaatactgggtttgattcccagggggaacaacacttggtcagtgcacatgcctctacgcacgagccgaattaatc 21530823  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    || |||||||||||| || |||||    
T  21530824 gctcacctttggtgggtcggaaac 21530847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 39474943 - 39475030
Alignment:
Q  43 ataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    ||||||||||||||||  | |||||||||||||||| |||||||||| |||||||||  ||  ||||||||||| |||||||| ||||    
T  39474943 ataccgggttcgattcctatggggaacaacgcttggtcagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgg 39475030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 45447946 - 45448069
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| |||  ||||||| |||||||||  ||||| |||||||||||||| ||||||||| ||||||| | | | || ||||||||    
T  45447946 agctccttccaaggacgtacccgagaaataccaggttcgatttccagggagaacaacgcttggctagtgcgcatccctctacacactagtcagattagtc 45448045  T
Q  116 gcccacctttggtggatcagaaac 139  Q
     ||||||||| |||| || |||||    
T  45448046 acccacctttagtgggtcggaaac 45448069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 14650293 - 14650407
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||| |||| |||||||||||  |||| ||||||| ||||| |||||||  ||||||||||||  ||  ||| ||||||    
T  14650293 agctccttccaaggacgtacccggagaatatcgggttcgatttccaggaggaacaatgcttgaccagtgcatatgcctctacgcatgagccgggttagtc 14650392  T
Q  116 gcccacctttggtgg 130  Q
    || ||||||||||||    
T  14650393 gctcacctttggtgg 14650407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 5039551 - 5039434
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||  ||||||| |||  ||||||| |||||||||  ||| |||||||| ||||| |||||| ||| |||||||||  ||  ||||||||||    
T  5039551 agctccttccatagatgtattcggggaataccgagttcgattcctaggaggaacaacacttggtcagtgcacatacctctacgcatgagccggattagtc 5039452  T
Q  116 gcccacctttggtggatc 133  Q
    || |||||||||||||||    
T  5039451 gctcacctttggtggatc 5039434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 8734773 - 8734696
Alignment:
Q  62 gggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||| |||||| ||||||||||||||| |||| |||  | ||||||||||||||||||||||| || |||||    
T  8734773 gggggaacaatgcttgggcagtgcgcatgcctcaacgcacgagccagattagtcgcccacctttggtgggtcggaaac 8734696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 10317852 - 10317756
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||| ||||||||| ||| ||||| ||||||| ||||||||| ||   || | |||||||||| ||||||||||||||| |||||    
T  10317852 aataccgggttcgattcccagggggaataacacttggtcagtgcgtatgcctctatgc-ataagcagattagtcgctcacctttggtggatcggaaac 10317756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 24969448 - 24969336
Alignment:
Q  25 caaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctt 124  Q
    |||||| ||||| ||||||||||||||||||||  |||||  |||||| |||||||||||||| ||||||||||  | | |||||||| |||| || |||    
T  24969448 caaggacgtatctggaaaataccgggttcgatttccaggg--aacaacacttggccagtgcgcgtgcctctacgtacaagtcggattaatcgctcatctt 24969351  T
Q  125 tggtggatcagaaac 139  Q
    || ||| || |||||    
T  24969350 tgatggctcggaaac 24969336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 42032068 - 42032155
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||| ||||||||| ||| ||||  |||||| |||||||||| || ||||||||||| ||||||||||| ||| | |||||||    
T  42032068 aagaagctccttccaaggacgtacccggggaatacctggttcgattcccacggggaacaacgtttggccagtgcacatacatctacgc 42032155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 45960135 - 45960013
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||| || || ||||| ||| ||||| || ||| |||||| ||||| ||||||||||||||||||||   |  ||||||||||    
T  45960135 agctctttccaaggacgtatcggggaa-taccgagtttgattcccaagggcaacaacacttggtcagtgcgcatgcctctacgcataagccggattagtc 45960037  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    || |||||||| |||||| |||||    
T  45960036 gctcacctttgatggatcggaaac 45960013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 4195327 - 4195221
Alignment:
Q  24 ccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacct 123  Q
    ||||||| ||||||||  ||||||| ||||||||  |||| ||||||||  ||||| |||||||||||||||||||  ||  |||||||| || |||||     
T  4195327 ccaaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggctagtgcgcatgcctctacgcatgagccggattagccgtccacca 4195228  T
Q  124 ttggtgg 130  Q
    |||||||    
T  4195227 ttggtgg 4195221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 20247306 - 20247197
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||| ||||||||||||| |  |  |||||| ||||||||||||| |||||||||||||||| |||| | |||| |||||||  ||  |||||||    
T  20247306 aagaagctccttccaaggatgta-cttgggaataccaggttcgattctcatggggaacaacgcttgggcagtacacatgtctctacgtacgggtcggatt 20247208  T
Q  112 agtcgcccacc 122  Q
    ||||| |||||    
T  20247207 agtcgtccacc 20247197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 22268162 - 22268088
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatg 90  Q
    ||||||||||||||| |||   ||  ||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  22268162 agctcattccaaggacgtacttggggaataccgggttcgattcccagggggaacaacatttggccagtgcgcatg 22268088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 365142 - 365199
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||||||||||| |||| ||||||||||||   ||||||||||||||||||||    
T  365142 aataccgggttcgattcacaggaggaacaacgcttaatcagtgcgcatgcctctacgc 365199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 37514897 - 37514993
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatta 112  Q
    ||||| |||||||||  || ||||  ||||| |||||||||| |||| |||||||||| |||| ||||||||||| |||||||| |||  |||||||    
T  37514897 agctccttccaaggacatacccggggaatactgggttcgattttcagtgggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggatta 37514993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 45697287 - 45697200
Alignment:
Q  51 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||| |||||| ||||  ||||||||||||||||||||  || | || ||||||| ||||||||||||| || |||||    
T  45697287 ttcgattctcagggg-aacaacacttgatcagtgcgcatgcctctacgcatgagttgggttagtcgtccacctttggtgggtcggaaac 45697200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 3603355 - 3603447
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggc----cagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    ||||||||||||||||||  |||||||||||| |||||    |||||||||||||||||||| |||  ||||||| |||  ||| ||||||||    
T  3603355 aataccgggttcgattctttgggggaacaacgtttggccggtcagtgcgcatgcctctacgcacgagccggattaatcgttcacttttggtgg 3603447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 28744183 - 28744262
Alignment:
Q  61 agggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 140  Q
    ||||||||||| ||||||||||| ||||| |||||||   |||  ||||||||||| ||||||||||||| || ||||||    
T  28744183 agggggaacaatgcttggccagtacgcatacctctacatacgagccggattagtcgtccacctttggtgggtcggaaact 28744262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 29151942 - 29151997
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 97  Q
    ||||||||||||||||| ||||  |||||||| ||| |||||||||||||||||||    
T  29151942 aataccgggttcgattcccaggaagaacaacgtttgaccagtgcgcatgcctctac 29151997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 32823253 - 32823320
Alignment:
Q  50 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgc 117  Q
    ||||||||| ||||||||||||| ||||||| ||| | |||||||||||| |||  ||||||||||||    
T  32823253 gttcgattcccagggggaacaacacttggccggtgtgtatgcctctacgcacgagccggattagtcgc 32823320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 39420861 - 39420923
Alignment:
Q  64 gggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 126  Q
    |||||||||||||||||||||||| |||||||||||  ||  ||||||||||| | |||||||    
T  39420861 gggaacaacgcttggccagtgcgcgtgcctctacgcatgagccggattagtcgtctacctttg 39420923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 48551878 - 48551956
Alignment:
Q  61 agggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||| |||||||| ||||||| ||||||||||||||||   ||  ||||||||||| ||||||||| |||||| |||||    
T  48551878 agggtgaacaacggttggccaatgcgcatgcctctacgtatgagccggattagtcgtccacctttgatggatcggaaac 48551956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 4706117 - 4706000
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||| || |||||  | ||||||  ||||||||| | ||||||||||||| || |||| | ||||||| ||||||| |||   |||||||||    
T  4706117 agctccttccaatgacgtatctaggaaatacatggttcgatttttagggggaacaacgtttagccattacgcatgcttctacgcacgagctggattagtc 4706018  T
Q  116 gcccacctttggtggatc 133  Q
    | ||||||||||| ||||    
T  4706017 gtccacctttggtagatc 4706000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 19914787 - 19914726
Alignment:
Q  65 ggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 126  Q
    ||||||||||||||||| |||||||||||||||||  ||  | ||||| |||||||||||||    
T  19914787 ggaacaacgcttggccaatgcgcatgcctctacgcatgagccagattaatcgcccacctttg 19914726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 46414685 - 46414734
Alignment:
Q  50 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||||||||  ||| |||||||||||| |||||||||||||||||    
T  46414685 gttcgattctcaggatgaataacgcttggccaatgcgcatgcctctacgc 46414734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 4228884 - 4228781
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||||||   |||||| |||||||||  ||||   ||||||| ||||||||||| |||||| ||||||  ||  ||||||||||    
T  4228884 agctccttccaaggacgtatccgaggaataccaggttcgatttccagg---aacaacgtttggccagtgcacatgcccctacgcatgagccggattagtc 4228788  T
Q  116 gcccacc 122  Q
    |||||||    
T  4228787 gcccacc 4228781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 25197230 - 25197150
Alignment:
Q  36 ccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 116  Q
    |||||||||||| | ||||||||| |  |||||||||||||| || ||||||||| |||||| | | | ||||||||||||    
T  25197230 ccggaaaatacctgattcgattcttaaagggaacaacgcttgaccggtgcgcatgtctctacacacaagtcggattagtcg 25197150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 32768984 - 32769036
Alignment:
Q  87 catgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||| ||| ||||||||||||  ||||||||||||||| |||||    
T  32768984 catgcctctacgcacgagtcggattagtcgttcacctttggtggatcggaaac 32769036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 4973217 - 4973130
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 129  Q
    |||| ||||||||||||  | |||||| ||| |||| ||| ||||||||||||||||  |||  ||||||||||| ||| ||||||||    
T  4973217 aatatcgggttcgattcctacggggaataacacttgaccaatgcgcatgcctctacgtacgagccggattagtcgtccagctttggtg 4973130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 48244463 - 48244372
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    |||||||||||| |||   | ||||||||| |||||  |||||||  |||||||||||  ||  |||||||||||| |||||||||||||||    
T  48244463 aataccgggttcaatttctaaggggaacaatgcttgatcagtgcgtttgcctctacgcatgagccggattagtcgctcacctttggtggatc 48244372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 9685715 - 9685771
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaac 72  Q
    ||||| ||||||| | ||||||||  |||| ||||||||||||||||| ||||||||    
T  9685715 agctccttccaagcacgtatccggggaatatcgggttcgattctcaggaggaacaac 9685771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 38988934 - 38988990
Alignment:
Q  74 cttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    ||||| |||||| |||||||||||||  ||| |||||||||||| || |||||||||    
T  38988934 cttggtcagtgcacatgcctctacgcatgaaccggattagtcgctcatctttggtgg 38988990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 43032892 - 43033001
Alignment:
Q  30 atgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 129  Q
    ||||||| || ||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||| | |||  ||||||||||||||||||||||||    
T  43032892 atgtatctgggaaatatcggattcgattcccagggggaacaacgcttggccagtgcgcatgcctctacacacgagccggattagtcgcccacctttggtg 43032991  T
Q  130 gatcagaaac 139  Q
    | ||||||||    
T  43032992 ggtcagaaac 43033001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 18373987 - 18374101
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||  ||  ||||||||||    
T  18373987 agctcattccaaagatatatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtc 18374086  T
Q  116 gcccacctttggtgg 130  Q
    | ||| |||||||||    
T  18374087 gtccaactttggtgg 18374101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 17981418 - 17981531
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||||||| |||| |||||||||||||||||| ||||||||||||| |||| |||||| |||||||||||||| ||| ||| ||||||     
T  17981418 agctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcatgcctctacgcacgagtcgaattagtt 17981517  T
Q  116 gcccacctttggtg 129  Q
    ||||| ||||||||    
T  17981518 gcccagctttggtg 17981531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 14666204 - 14666090
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||| | |  | ||||||||    
T  14666204 agctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcacaagccagattagtc 14666105  T
Q  116 gcccacctttggtgg 130  Q
    ||||||  |||||||    
T  14666104 gcccacagttggtgg 14666090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 33401906 - 33401814
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatca 134  Q
    |||||||||||||||| |||||||||||||| |||| |||||| ||||||||||||||  || ||||||||||||||||||||| ||||||||    
T  33401906 aataccgggttcgattttcagggggaacaacacttgaccagtgtgcatgcctctacgcatgagtcggattagtcgcccacctttagtggatca 33401814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 2964053 - 2964176
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||| | ||| ||||  ||||||| |||||||||  | | ||||||||||||||||| || |||||||||||||| |||| ||||||||||    
T  2964053 agctccttccaagaacgtacccggggaataccgtgttcgattccgatgaggaacaacgcttggccaatgtgcatgcctctacgcacgaaccggattagtc 2964152  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    ||||||||||||||| ||||||||    
T  2964153 gcccacctttggtgggtcagaaac 2964176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 15884688 - 15884566
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| | ||  ||||||||||||||||| |||||| |||||| |||||| ||||||||||||||||||| |||  ||||||||||    
T  15884688 agctccttccaaggacgtacctggggaataccgggttcgattcccagggg-aacaacacttggcaagtgcgcatgcctctacgcacgagccggattagtc 15884590  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    ||||||||||||||| || |||||    
T  15884589 gcccacctttggtgggtcggaaac 15884566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 13358999 - 13359093
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggat 110  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||||||  |||||||||||||| |||||||||| ||||||||| ||| ||||||    
T  13358999 agctccttccaaagatgtgtccggaaaataccgggttcgattctcagaaggaacaacgcttggacagtgcgcatacctctacgcacgagtcggat 13359093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 583816 - 583912
Alignment:
Q  41 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||||  ||||  ||||||||||| |||||||||||||||||||||  || |||||||||||||||||||||| ||||| ||||||    
T  583816 aaataccgggttcgattcctaggg--aacaacgcttgaccagtgcgcatgcctctacgcatgagtcggattagtcgcccacctttgatggattagaaac 583912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 6100449 - 6100563
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| || |||||| ||||||||  ||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||  ||  ||||||||||    
T  6100449 agctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgccactacgcatgagccggattagtc 6100548  T
Q  116 gcccacctttggtgg 130  Q
    |  ||||||| ||||    
T  6100549 gttcacctttagtgg 6100563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 1013104 - 1013027
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||| ||||||||  ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  1013104 ttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacgcttggccagtacacatgcctctacgc 1013027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 8141085 - 8141202
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| |||| |||  ||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||  ||   | |||||||| ||||    
T  8141085 ttccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgcgcatgcctctacgcatgagctgaattagtcgtccac 8141184  T
Q  122 ctttggtggatcagaaac 139  Q
     |||||||| ||||||||    
T  8141185 atttggtgggtcagaaac 8141202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 9860129 - 9860005
Alignment:
Q  16 agctcattccaaggatgtatccggaa-aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagt 114  Q
    ||||| ||||||||| ||||||||   ||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| |  ||  | |||||||    
T  9860129 agctccttccaaggacgtatccgggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacacatgagccagattagt 9860030  T
Q  115 cgcccacctttggtggatcagaaac 139  Q
    || ||||| |||||||||| |||||    
T  9860029 cgtccaccattggtggatcggaaac 9860005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 24837219 - 24837343
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||| | ||| ||||  ||||||| ||||||||| ||||| |||||||||||||||||||  |||||||||| || |||   |||||||||    
T  24837219 agctccttccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttggccagtgttcatgcctctaagcacgagcaggattagtc 24837318  T
Q  116 gcccacctttggtggatcagaaact 140  Q
    | |||||||||||||||| ||||||    
T  24837319 gtccacctttggtggatcggaaact 24837343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 45521149 - 45521268
Alignment:
Q  19 tcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcc 118  Q
    |||||||||||||||| ||||  ||||||||||||||||| |||||| |||||| ||||  ||||||||||||||||||||  ||  ||||||||||||     
T  45521149 tcattccaaggatgtacccggggaataccgggttcgattcccagggg-aacaacacttgatcagtgcgcatgcctctacgcatgagccggattagtcgct 45521247  T
Q  119 cacctttggtggatcagaaac 139  Q
    |||||||| ||| || |||||    
T  45521248 cacctttgatgggtcggaaac 45521268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 3418646 - 3418523
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||| ||  |||| ||||||||||| | ||| |||||||| |||||||||||||||||| |||||||  || || ||||||||    
T  3418646 agctccttccaaggacgtatctggggaatatcgggttcgatttttaggaggaacaacacttggccagtgcgcatgcgtctacgcatgagtcagattagtc 3418547  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | |||||||| |||| ||||||||    
T  3418546 gtccacctttagtgggtcagaaac 3418523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 38922547 - 38922464
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  38922547 agctccttccaaggacgtacccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctttacgc 38922464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 10927592 - 10927706
Alignment:
Q  25 caaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctt 124  Q
    |||||| ||| ||||  |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||  ||  |||||||||||  ||||||    
T  10927592 caaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctt 10927691  T
Q  125 tggtggatcagaaac 139  Q
    | |||| || |||||    
T  10927692 tagtgggtcggaaac 10927706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 14846549 - 14846666
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||| ||| ||||| ||| ||||  |||||||||||||||||||||||| ||||| | |||| ||||||||||||||||||||  || || |||     
T  14846549 aagaagctccttctaaggacgtacccggggaataccgggttcgattctcagggg-aacaatgattggtcagtgcgcatgcctctacgcatgagtcagata 14846647  T
Q  112 agtcgcccacctttggtgg 130  Q
    ||||| |||||||||||||    
T  14846648 agtcgtccacctttggtgg 14846666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 2467251 - 2467146
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||| ||  ||  ||||||||||    
T  2467251 agctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgcgcatgtctctatgcatgagccggattagtc 2467152  T
Q  116 gcccac 121  Q
    | ||||    
T  2467151 gtccac 2467146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 4479402 - 4479306
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||  ||   |||||||||| ||||||||||||| || |||||    
T  4479402 aataccggattcgattcccagggg-aacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaac 4479306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 6042824 - 6042917
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcag 135  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||  ||||  ||  |||||||||||||||||  |||||| ||||    
T  6042824 aataccgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctaaacgcatgagccggattagtcgcccaccactggtgggtcag 6042917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 6940535 - 6940608
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcat 89  Q
    ||||||||||||||| |||||||||||||| |||||||||||  |||| ||||||||||||||| |||||||||    
T  6940535 agctcattccaaggaggtatccggaaaatatcgggttcgatttccaggtggaacaacgcttggctagtgcgcat 6940608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 13085501 - 13085605
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||||||| |||||||||| || ||||||| |||| ||||||||| |||  | ||||| ||    
T  13085501 agctccttccaaggacgtatccggggaataccgggttcgattctcagagggaacaacgtttagccagtgtgcatacctctacgcacgagccagattaatc 13085600  T
Q  116 gccca 120  Q
    |||||    
T  13085601 gccca 13085605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 16893920 - 16894027
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    |||||| || ||||||||  |||| |||||||||||| ||||||||| |||||||||||||| | ||||||| |||||  ||  |||||| |||||||||    
T  16893920 ttccaatgacgtatccggggaatatcgggttcgattcacagggggaataacgcttggccagtacacatgcctttacgcatgagccggatt-gtcgcccac 16894018  T
Q  122 ctttggtgg 130  Q
    |||||||||    
T  16894019 ctttggtgg 16894027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 26570911 - 26571011
Alignment:
Q  26 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 125  Q
    ||||||||||| || ||||| ||||||| ||||  |||||||||||||||||||||||| | |||| |||||||  ||  ||||||||||| ||||||||    
T  26570911 aaggatgtatctgggaaatatcgggttcaattcctagggggaacaacgcttggccagtgtgtatgcatctacgcatgagccggattagtcgtccaccttt 26571010  T
Q  126 g 126  Q
    |    
T  26571011 g 26571011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 34846791 - 34846873
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||||||||| ||| |||| || ||||||||||||||| || || ||||||||||||||||||  ||||||||||||||    
T  34846791 agctcattccaaggacgtacccgggaa-taccgggttcgattcccatggtgaacaacgcttggccagtatgcatgcctctacgc 34846873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 44031567 - 44031464
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgc-----gcatgcctctacgctcgaatcggattagtcg 116  Q
    ||||||||||||| |||| ||||| |||||||||||  |||||||||||||||||||||||||      |||||||||| ||| |||  |||||||||||    
T  44031567 ttccaaggatgtaaccgggaaatatcgggttcgatttccagggggaacaacgcttggccagtgtagtgtgcatgcctctgcgcacgagccggattagtcg 44031468  T
Q  117 ccca 120  Q
    ||||    
T  44031467 ccca 44031464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 44893411 - 44893288
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  |||||||||||| |||   ||||||||||| |||||||||||| |||||||||||||| |||  ||||||| ||    
T  44893411 agctccttccaaggacgtacccggggaataccgggttcaatttctagggggaacaatgcttggccagtgtgcatgcctctacgcacgagccggattaatc 44893312  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    || |||| ||| ||| || |||||    
T  44893311 gctcacccttgatgggtcggaaac 44893288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 33935842 - 33935761
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacct 123  Q
    |||||||| ||||||||  |||| ||||||| |||||||||||||||||||| |||||  || ||||||||||||| |||||    
T  33935842 aataccggattcgattcctagggagaacaacacttggccagtgcgcatgcctatacgcatgagtcggattagtcgctcacct 33935761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 34710694 - 34710586
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| |||  ||||||||||||| |||||||| |||||| |||||| |||||| ||||||||||||| ||| | | | ||||| |||||| |||     
T  34710694 ttccaaggacgtactcggaaaataccggattcgattcccaggggaaacaacacttggctagtgcgcatgcctttacacacaagtcggactagtcgtccat 34710595  T
Q  122 ctttggtgg 130  Q
    | |||||||    
T  34710594 cattggtgg 34710586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 130
Target Start/End: Complemental strand, 16291303 - 16291222
Alignment:
Q  49 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    ||||||||| |||||||||||||| |||||||||| | |||||||||| ||  ||   ||||||||||| ||||||||||||    
T  16291303 ggttcgattttcagggggaacaacacttggccagtacacatgcctctatgcatgagctggattagtcgctcacctttggtgg 16291222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 43027308 - 43027405
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||| ||||||||||| |||| ||||||||| ||| ||| |||||||||||||||||  ||  ||||||||||| ||| ||||| ||| || |||||    
T  43027308 aatactgggttcgattcccaggaggaacaacgattgtccaatgcgcatgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaac 43027405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 8587033 - 8586989
Alignment:
Q  55 attctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||| |||||||||||||||||||||||||||||| |||||||||    
T  8587033 attcccagggggaacaacgcttggccagtgcgcatacctctacgc 8586989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 11785893 - 11785975
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||||||||| ||| ||||  |||||||| |||||||| || ||||| ||||| |||| ||||| ||||||||||||||    
T  11785893 agctcattccaaggacgtacccggggaataccggattcgattc-caaggggagcaacgtttgggcagtgtgcatgcctctacgc 11785975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 27975900 - 27975987
Alignment:
Q  48 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcag 135  Q
    ||||||||||| |||  |||||||| ||||  ||||| ||||||||||||||| ||  ||||||| |||||||||||| |||| ||||    
T  27975900 gggttcgattcccagaaggaacaacacttgatcagtgtgcatgcctctacgcttgagccggattaatcgcccacctttagtgggtcag 27975987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 28033169 - 28033256
Alignment:
Q  48 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcag 135  Q
    ||||||||||| |||  |||||||| ||||  ||||| ||||||||||||||| ||  ||||||| |||||||||||| |||| ||||    
T  28033169 gggttcgattcccagaaggaacaacacttgatcagtgtgcatgcctctacgcttgagccggattaatcgcccacctttagtgggtcag 28033256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 22810057 - 22810130
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatg 90  Q
    ||||| ||||||||| ||||||||| || | |||||||||||| | |||| |||||||||||| |||||||||||    
T  22810057 agctccttccaaggacgtatccggagaacatcgggttcgattccctgggg-aacaacgcttggtcagtgcgcatg 22810130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 23895578 - 23895668
Alignment:
Q  49 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||| ||| |||| || |||||||||||||||||||||||| ||||||||| |||   |||||| ||| ||||||||| ||| || |||||    
T  23895578 ggttggatcctcatggagaacaacgcttggccagtgcgcatacctctacgcacgagatggattaatcgtccacctttgatgggtcggaaac 23895668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 29933750 - 29933831
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacg 98  Q
    ||||| ||| ||| ||||||||||| ||||| ||||||||||| ||||| ||||||| |||| ||||||  ||||||||||||    
T  29933750 agctccttctaagaatgtatccggagaatac-gggttcgattcccagggagaacaacacttgaccagtgtacatgcctctacg 29933831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 13358047 - 13357966
Alignment:
Q  58 ctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||||||||| ||||||| || ||||||||||| || |||  ||||||||||| || ||||| |||| || |||||    
T  13358047 ctcagggggaacaacgtttggccaatgtgcatgcctctatgcacgagccggattagtcgtccccctttagtgggtcggaaac 13357966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 18091428 - 18091485
Alignment:
Q  67 aacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctt 124  Q
    ||||||| ||| ||||||||||||||||||||| |||  || ||||||||||||||||    
T  18091428 aacaacgtttgaccagtgcgcatgcctctacgcacgaggcgaattagtcgcccacctt 18091485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 36662408 - 36662504
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||| ||||||||||| ||||||| |||||  ||| |||||||||||||||||||||   ||| ||||||||||| |||| |||  |||||| |||||    
T  36662408 aatatcgggttcgattttcagggg-aacaatacttagccagtgcgcatgcctctacgtatgaaccggattagtcgtccacttttaatggatcggaaac 36662504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 68200 - 68108
Alignment:
Q  47 cgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||| ||||||||| |||||||||  |||||||| ||| | |||  ||||||| |||  |||||||| ||| || |||||    
T  68200 cgggttcgattctcaggaggaacaacgtttggccagtatgcatgcctttacacacgagccggattaatcgttcacctttgatgggtcggaaac 68108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 7673745 - 7673673
Alignment:
Q  61 agggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    ||||||||||||| ||||| |||| |||||||||||||| |||  ||||||  ||||||| |||| |||||||    
T  7673745 agggggaacaacgtttggctagtgtgcatgcctctacgcacgagccggatttttcgcccatctttagtggatc 7673673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 24938644 - 24938572
Alignment:
Q  67 aacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||| ||||| || |||||||||||||||||  ||| ||||||||||  ||||||||| |||||| |||||    
T  24938644 aacaacacttggtcaatgcgcatgcctctacgcatgaaccggattagtcatccacctttgatggatcggaaac 24938572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 34613895 - 34613831
Alignment:
Q  32 gtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 96  Q
    ||||||||  |||| |||||||||||| |||| |||||||||  |||||||| ||||||||||||    
T  34613895 gtatccggggaatatcgggttcgattcccaggaggaacaacgtctggccagtacgcatgcctcta 34613831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 35496355 - 35496271
Alignment:
Q  49 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    ||||| ||| |||| || |||||| ||||| |||||||||||||||||||  |||   |||||| ||||||||||||| ||||||    
T  35496355 ggttcaattttcagaggaaacaacacttggtcagtgcgcatgcctctacgtacgagctggattaatcgcccacctttgatggatc 35496271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 22958782 - 22958865
Alignment:
Q  51 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatca 134  Q
    ||||||| |||| |||||||| |||||| ||||| ||||| ||||| ||  ||  ||||||||||| ||||||||||| |||||    
T  22958782 ttcgattttcagagggaacaatgcttggtcagtgtgcatgtctctatgcatgagccggattagtcgtccacctttggtagatca 22958865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 3567907 - 3567964
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||||||| ||||| ||| |||||||||||| |||| ||||||| ||| |||||||||    
T  3567907 aataccggattcgaatctaagggggaacaacacttgaccagtgcacatacctctacgc 3567964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 10699001 - 10698937
Alignment:
Q  75 ttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||||||||||  ||| | ||||||||| ||||||  ||||| ||| |||||    
T  10699001 ttggccagtgcgcatgcctctacgtacgagttggattagtcacccaccaatggtgaatcggaaac 10698937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 22212606 - 22212534
Alignment:
Q  59 tcagggggaacaacgcttgg-ccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    ||||| |||||||||||| | ||||| ||||||| ||||||| ||   |||||||||||| ||||||||||||    
T  22212606 tcaggtggaacaacgctttgaccagtacgcatgcttctacgcacgggccggattagtcgctcacctttggtgg 22212534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 22276613 - 22276545
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtg 84  Q
    ||||| ||||||||| ||| || ||||||||||||||| ||||  ||| |||||||| ||||| |||||    
T  22276613 agctccttccaaggacgtacccagaaaataccgggttctattcctaggaggaacaacacttggtcagtg 22276545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 4e-31; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 7866555 - 7866683
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| |||   |||||||||||||||||  ||| |||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  7866555 agctccttccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtc 7866654  T
Q  116 gcccacctttggtggatcagaaactagtg 144  Q
    ||||||||||||||| | |||||| ||||    
T  7866655 gcccacctttggtgggttagaaaccagtg 7866683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 9812846 - 9812969
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  |||||||||||||||||  ||| |||||||||||||||||||| |||||| |||||||  ||| ||||||||||    
T  9812846 agctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcttctacgcatgaaccggattagtc 9812945  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    ||||||||||||||| ||||||||    
T  9812946 gcccacctttggtgggtcagaaac 9812969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 12766105 - 12766228
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  |||||||||||||||||| ||| ||||||| |||||||||||| ||||||||||||||  ||| | ||||||||    
T  12766105 agctccttccaaggacgtacccggggaataccgggttcgattctgaggaggaacaatgcttggccagtgtgcatgcctctacgcatgaaccagattagtc 12766204  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    ||||||||||||||| ||||||||    
T  12766205 gcccacctttggtgggtcagaaac 12766228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 9805004 - 9805101
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||| ||||||||||||| || |||||    
T  9805004 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaac 9805101  T

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Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 12081879 - 12081995
Alignment:
Q  13 agaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatta 112  Q
    ||||| || ||| ||||| ||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  || ||||    
T  12081879 agaagttccttcaaaggacgtatccggggaatactgggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaatta 12081978  T
Q  113 gtcgcccacctttggtg 129  Q
    |||| ||||||||||||    
T  12081979 gtcgtccacctttggtg 12081995  T

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Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 12704988 - 12705111
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  |||||||||||||||||  ||| ||||||||||||| |||||| |||||| |||||||  ||| ||||||||||    
T  12704988 agctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtc 12705087  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    ||||||||||||||| ||||||||    
T  12705088 gcccacctttggtgggtcagaaac 12705111  T

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Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 42086301 - 42086424
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| |||   ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||  ||  ||||||||||    
T  42086301 agctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtc 42086400  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||||||||||| || |||||    
T  42086401 gtccacctttggtgggtcggaaac 42086424  T

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Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 38897825 - 38897724
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaacta 141  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||| ||||| |    
T  38897825 aataccgggttcgatttccagggg-aacaacgcttggccagtgcgcatgcctctacgcacgagccggattagttgcccacctttggtggatcggaaacca 38897727  T
Q  142 gtg 144  Q
    |||    
T  38897726 gtg 38897724  T

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Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 4016392 - 4016260
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||||||||||||| ||| | |  ||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||| | |||  ||||||    
T  4016392 aagaagctcattccaaggacgtacctgagaaatatcgggttcgattatcagggggaacaacacttggccagtgcgcatgcctctacacacgagccggatt 4016293  T
Q  112 agtcgcccacctttggtggatcagaaactagtg 144  Q
    ||| || |||| ||||||| || ||||| ||||    
T  4016292 agttgctcaccattggtgggtcggaaaccagtg 4016260  T

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Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 20525812 - 20525935
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| || |||||||||||||||  |||| |||||||||||| |||| |||||||| ||| ||||||||||||||||||||||  ||  ||||||||||    
T  20525812 agctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgcgcatgcctctacgcatgagccggattagtc 20525911  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||| |||||||||| |||||    
T  20525912 gtccaccattggtggatcggaaac 20525935  T

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Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 42291618 - 42291515
Alignment:
Q  36 ccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcag 135  Q
    ||||| ||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||| |||  ||||||||||| ||||||||| |||||| |    
T  42291618 ccggagaataccgggtttgattcccagggtgaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgtccacctttgatggatcgg 42291519  T
Q  136 aaac 139  Q
    ||||    
T  42291518 aaac 42291515  T

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Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 3654045 - 3653930
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||| |||||||||||||||||  |  | |||||||||||| ||||||||||||||||||||| |||  ||||||||||    
T  3654045 agctctttccaaggacgtacccggagaataccgggttcgattccta--gagaacaacgcttgaccagtgcgcatgcctctacgcacgaggcggattagtc 3653948  T
Q  116 gcccacctttggtggatc 133  Q
    | ||||||||||||||||    
T  3653947 gtccacctttggtggatc 3653930  T

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Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 14974457 - 14974343
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||| ||||| ||||||||| |||| ||||||||||||| | ||||||||||  ||||||||||| |||||||||||||  ||  ||||||||||    
T  14974457 agctcattctaaggacgtatccggagaatatcgggttcgattctaaaggggaacaacatttggccagtgcacatgcctctacgcatgagccggattagtc 14974358  T
Q  116 gcccacctttggtgg 130  Q
    | |||||||||||||    
T  14974357 gtccacctttggtgg 14974343  T

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Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 19572698 - 19572812
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  ||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||    
T  19572698 agctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 19572797  T
Q  116 gcccacctttggtgg 130  Q
    |  |||| |||||||    
T  19572798 gttcaccattggtgg 19572812  T

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Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 42 - 140
Target Start/End: Original strand, 23383657 - 23383755
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 140  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||  ||   |||||||||| ||||||||||||| || ||||||    
T  23383657 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaact 23383755  T

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Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 1538405 - 1538528
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||| |||| |||| |||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||| ||    
T  1538405 agctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatc 1538504  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||| ||||||| || |||||    
T  1538505 gtccaccattggtgggtcggaaac 1538528  T

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Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 1898975 - 1899050
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgc 91  Q
    ||||| ||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1898975 agctccttccaaggatgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgc 1899050  T

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Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 7308497 - 7308374
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||||| ||||  |   |||| |||||||||||| ||||||||||||||||||| |||||| |||||||||||||  ||  ||||||||||    
T  7308497 agctcattccaaggacgtatttgaggaatatcgggttcgattcccagggggaacaacgcttgggcagtgcacatgcctctacgcatgagccggattagtc 7308398  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    || |||||||| ||||||| ||||    
T  7308397 gctcacctttgatggatcaaaaac 7308374  T

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Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 8513493 - 8513616
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  |||||||||||||||||  ||||| ||||| ||||||||||||| ||||||||||||| |||  | ||||||||    
T  8513493 agctccttccaaggacgtacccggggaataccgggttcgattcctaggggaaacaatgcttggccagtgcacatgcctctacgcacgagccagattagtc 8513592  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||||||||||| || |||||    
T  8513593 gtccacctttggtgggtcggaaac 8513616  T

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Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 25417316 - 25417217
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||  |||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||  ||||||||||    
T  25417316 agctccttccaaggacgtactcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaacgagccggattagtc 25417217  T

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Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 137
Target Start/End: Original strand, 30995121 - 30995216
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaa 137  Q
    |||||| |||||||||| ||||||||||||| ||||||||| |||||||||||||||| |||  |||||||||||| || ||||||||||| ||||    
T  30995121 aataccaggttcgattcccagggggaacaacacttggccagggcgcatgcctctacgcacgagccggattagtcgctcatctttggtggataagaa 30995216  T

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Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 5732053 - 5731971
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacg 98  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  5732053 agctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacg 5731971  T

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Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 21149734 - 21149824
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggat 132  Q
    |||||| ||||||||| ||||||||||||||| ||| |||||||||||| |||||||| ||| | |||||||||||||||| |||||||||    
T  21149734 aataccaggttcgattttcagggggaacaacgtttgaccagtgcgcatgactctacgcacgagttggattagtcgcccaccattggtggat 21149824  T

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Target: chr5; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 37263241 - 37263337
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||  ||||||||||| ||||||||  |||||| |||||    
T  37263241 aatatcgggttcgattctcagggg-aacaacgcttggccaatgcgcatgcctctacgcacgagccggattagtcgtccacctttattggatcggaaac 37263337  T

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Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 35403645 - 35403557
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaa 104  Q
    ||||| ||||||||| |||  ||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||| ||||    
T  35403645 agctccttccaaggacgtactcgggaaataccgggttcgattctaagggggaacaacgcttggccaatgcgcatgtctctacgcacgaa 35403557  T

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Target: chr5; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 38369700 - 38369783
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 126  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||||  ||||||||||    
T  38369700 aatatcgggttcgattctcagggg-aacaacacttggccagtgcgcatgcctctacgcacgagtcggattagtaacccacctttg 38369783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 18262725 - 18262634
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    |||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||| | |||  |||||||||||||||||| || ||||||    
T  18262725 aataccgggttctattttcagggggaacaacgcttgaccagtgcgcatacctctacacacgagccggattagtcgcccacctctgatggatc 18262634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 28857102 - 28857185
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| ||||||||| | | ||||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  28857102 agctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgc 28857185  T

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Target: chr5; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 39728361 - 39728471
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||| | ||| ||||  |||||| ||||||||| |||| || |||||| ||||||||||| |||||||||||||||||| ||| |||||||    
T  39728361 agctctttccaagaacgtacccggggaataccaggttcgattatcagaggaaacaacacttggccagtgtgcatgcctctacgctcgagtcgaattagtc 39728460  T
Q  116 gcccacctttg 126  Q
    || ||||||||    
T  39728461 gctcacctttg 39728471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 18136413 - 18136332
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 97  Q
    ||||| |||||| || ||||||||| ||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||    
T  18136413 agctccttccaaagacgtatccggagaataccgggttcgattcccagggggaacaacacttggtcagtgtgcatgcctctac 18136332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 14588741 - 14588637
Alignment:
Q  25 caaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctt 124  Q
    |||||| ||||| ||  |||| ||||||||||| ||||| |||| |||||||| |||||||||||||||||||||  ||  ||||||||||| |||||||    
T  14588741 caaggacgtatctggggaatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctt 14588642  T
Q  125 tggtg 129  Q
    |||||    
T  14588641 tggtg 14588637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 13664234 - 13664317
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| ||||||||| |||||  |  |||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  13664234 agctccttccaaggacgtatctagggaataccggattcgattatcagggggaacaacacttggccagtgcgcatgcctctacgc 13664317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 39099868 - 39099789
Alignment:
Q  60 cagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||  ||||||||||||||||||||||||| || |||||    
T  39099868 cagggggaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaac 39099789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 5079305 - 5079419
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||| | |||||||   ||||||||| | ||||  ||||||||||| ||||||| || ||||||||| ||||||| |||  ||||||||||    
T  5079305 agctccttccaagcacgtatccgtggaataccggggttgatttccagggggaacagcgcttggtcaatgcgcatgcttctacgcacgagccggattagtc 5079404  T
Q  116 gcccacctttggtgg 130  Q
    |||||||||||||||    
T  5079405 gcccacctttggtgg 5079419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 20682706 - 20682636
Alignment:
Q  60 cagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    |||||||||||||||||||||||||||||||||||||||| |||  ||||||| ||| |||||||| ||||    
T  20682706 cagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgaccacctttagtgg 20682636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 35813135 - 35813021
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||||||||||||| ||| |||   |||||||||||||||||  ||||| || || ||||| |||||||||||| |||||| |  || |||||||    
T  35813135 aagaagctcattccaaggacgtacccgaggaataccgggttcgattcctaggggaaataatgcttgaccagtgcgcatgtctctacacatgagtcggatt 35813036  T
Q  112 agtcgcccacctttg 126  Q
    ||||| |||||||||    
T  35813035 agtcgtccacctttg 35813021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 40117424 - 40117506
Alignment:
Q  51 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||  ||  ||||||| |||  |||||||||||||||    
T  40117424 ttcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttggtggatc 40117506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 20228717 - 20228814
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||| |||||||||||  | ||| ||||| ||||||| |||||| |||||||||| | ||| || ||||||||||||| ||||||||||||||||||    
T  20228717 aatacagggttcgattcctaagggaaacaatgcttggctagtgcgtatgcctctacacacgagtcagattagtcgcccatctttggtggatcagaaac 20228814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 24463986 - 24463910
Alignment:
Q  49 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 125  Q
    ||||||||| ||| || |||||||| |||||||||||||||||||||| || |||  ||||||||||||||||||||    
T  24463986 ggttcgattttcaaggcgaacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcgcccaccttt 24463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 26077115 - 26077198
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||||||||| ||||  ||  |||||  |||||||||| ||| |||||||||||||||||||||| |||||||||||||    
T  26077115 agctcattccaaggacgtatttggggaatactaggttcgattcccagagggaacaacgcttggccagtgcacatgcctctacgc 26077198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 11845934 - 11845852
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacg 98  Q
    ||||| ||||||||| ||| |||  ||||| |||||||||||   ||||||||||||| ||||||||||||||||||||||||    
T  11845934 agctccttccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacg 11845852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 23247484 - 23247374
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||||| ||| | ||  |||| |||||||||||| |||| |||||||||||||  ||||  |||||||||||||| |||  | ||||||||    
T  23247484 agctcattccaaggacgtacctggggaatatcgggttcgattcccaggaggaacaacgcttgatcagtatgcatgcctctacgcacgagccagattagtc 23247385  T
Q  116 gcccacctttg 126  Q
    | |||||||||    
T  23247384 gtccacctttg 23247374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 41800977 - 41801051
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 116  Q
    |||| ||||||||||||||| ||||||||||||||| ||| |||||||| |||||||| |||  |||||||||||    
T  41800977 aatatcgggttcgattctcaaggggaacaacgcttgaccaatgcgcatgtctctacgcacgagccggattagtcg 41801051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 20255343 - 20255456
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||| ||||| |||  |||  ||||||||| |||   ||||||  ||||||| |||| |||||||||||||||||||||  || |||||||||||    
T  20255343 agctcattctaaggacgtactcggggaataccggggtcgtaactcaggacgaacaacacttgaccagtgcgcatgcctctacgcatgagtcggattagtc 20255442  T
Q  116 gcccacctttggtg 129  Q
    | ||||||||||||    
T  20255443 gtccacctttggtg 20255456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 43399145 - 43399214
Alignment:
Q  59 tcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggt 128  Q
    |||||||||| |||||||||||||||||||||||||||||| |||   |||||||||| |||| ||||||    
T  43399145 tcagggggaataacgcttggccagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggt 43399214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 14152024 - 14152104
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 96  Q
    ||||| |||||| |||||| | ||  ||||||||||||||||||||  ||||||||||||||||||||| |||||| ||||    
T  14152024 agctccttccaatgatgtacctggggaataccgggttcgattctcatagggaacaacgcttggccagtgtgcatgcttcta 14152104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 40060296 - 40060344
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatg 90  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  40060296 aataccgggttcgattttcagggggaacaacacttggccagtgcgcatg 40060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 41163592 - 41163469
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||| | ||| ||||  ||||||||||||||||| |||||| ||||||| ||||||||||| |||| ||||||||  ||   |||||||||    
T  41163592 agctccttccaagaacgtacccggggaataccgggttcgattcccagggg-aacaacgtttggccagtgcacatgtctctacgcatgagctggattagtc 41163494  T
Q  116 gcccacctttggtggatcagaaact 140  Q
    | |||||||| |||| || ||||||    
T  41163493 gtccaccttttgtgggtcggaaact 41163469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 2485171 - 2485293
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||||| |||| | |  ||||| |||||||||||  ||||| |||||| || |||| |||||||||||||||||   || |||||||||||    
T  2485171 agctcattccaaggacgtattcagggaatactgggttcgattcctagggg-aacaaccctgggcctgtgcgcatgcctctacgtatgagtcggattagtc 2485269  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    || |||||||| ||| || |||||    
T  2485270 gctcacctttgatgggtcggaaac 2485293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 14728081 - 14728180
Alignment:
Q  41 aaataccgggttcgattctcaggggga-acaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||| ||||||| ||||||||  ||||||||||| ||||||||||||||||||||  ||  ||||||||| || |||||||| ||| || |||||    
T  14728081 aaataccggattcgattttcagggggggacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagttgctcacctttgatgggtcggaaac 14728180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 15034049 - 15034172
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||||||| ||||  |||||||||||| |||  || ||| |||||| ||||| ||||| ||||||||||||||  ||  | |||||||     
T  15034049 agctccttccaaggatgtacccggggaataccgggttcaatttccatgggaaacaacacttggtcagtgtgcatgcctctacgcatgagcctgattagtt 15034148  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||||||| |||||| |||||    
T  15034149 gtccacctttgatggatcggaaac 15034172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 28862799 - 28862882
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| |||||| || |||| |||  |||| | ||||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  28862799 agctccttccaaagacgtattcggggaatatcaggttcgattctcaggcggaacaacgcttggccaatgcacatgcctctacgc 28862882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 24875319 - 24875429
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    |||| |||||||||| ||| ||  | |||| | ||||||||||| |||| |||||||| ||| |||||||||||| |||||||| |||  ||||||| ||    
T  24875319 agcttattccaaggacgtacccaaagaatatcaggttcgattcttagggagaacaacgtttgaccagtgcgcatgtctctacgcacgagccggattaatc 24875418  T
Q  116 gcccacctttg 126  Q
    | |||||||||    
T  24875419 gtccacctttg 24875429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 30349559 - 30349633
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 96  Q
    ||||||||| ||||||||  ||||||||||| ||||   ||||||||||| | ||||||||||||||||||||||    
T  30349559 ttccaaggacgtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgcgcatgcctcta 30349633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 42861351 - 42861237
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    |||||||||||||||  |||||||  |||| ||||||| |||  |  ||| |||||| ||||||||||||||||||||||||||  ||  ||||||| ||    
T  42861351 agctcattccaaggacatatccggggaatatcgggttcaatttcccagggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatc 42861252  T
Q  116 gcccacctttggtgg 130  Q
    | ||||| |||||||    
T  42861251 gtccaccattggtgg 42861237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 9168337 - 9168272
Alignment:
Q  65 ggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    ||||||||||||||||||||||||| |||||||||  ||  ||||||||||| |||||||| ||||    
T  9168337 ggaacaacgcttggccagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgg 9168272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 19839325 - 19839410
Alignment:
Q  40 aaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 125  Q
    |||||||||| ||| ||| ||||| |||||||||||||  ||||||||||||||||||   ||| || ||||||||||| ||||||    
T  19839325 aaaataccggattcaattttcaggaggaacaacgcttgatcagtgcgcatgcctctacatacgagtcagattagtcgcctaccttt 19839410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 138
Target Start/End: Original strand, 22295215 - 22295312
Alignment:
Q  41 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaa 138  Q
    ||||| |||||| |||||| |||||||| ||  ||||||||||||||||||||||||||  || | |||||||||||  | ||||||| | |||||||    
T  22295215 aaatatcgggtttgattctgagggggaataatacttggccagtgcgcatgcctctacgcatgagttggattagtcgcttatctttggtaggtcagaaa 22295312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 18294570 - 18294494
Alignment:
Q  63 ggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||||||||| |||||||||| ||||||| |  ||| ||||||| ||||||| ||||||||| || |||||    
T  18294570 ggggaacaacgcttggtcagtgcgcatacctctacacatgaaccggattaatcgcccatctttggtgggtcggaaac 18294494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 16755035 - 16755109
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatg 90  Q
    ||||| |||||| || ||||||||  ||||| |||||||||| ||||| | |||||| |||||||||||||||||    
T  16755035 agctctttccaaagacgtatccggggaatactgggttcgattttcaggagaaacaacacttggccagtgcgcatg 16755109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 6764531 - 6764458
Alignment:
Q  75 ttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaactagtgaaaa 148  Q
    ||||| ||||||||||||||||||| |||  ||||||||||||| | ||||| ||| || |||||| |||||||    
T  6764531 ttggctagtgcgcatgcctctacgcacgagccggattagtcgcctatctttgttgggtcggaaactggtgaaaa 6764458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 20692913 - 20693030
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| ||| ||||  ||||||||||| |||||  || || ||||||||||||||||| | |||||||||  ||  || || ||||||| | ||||    
T  20692913 ttccaaggacgtacccggggaataccgggtttgattcctagaggaaacaacgcttggccagtacacatgcctctgtgcatgattcagattagttgtccac 20693012  T
Q  122 ctttggtggatcagaaac 139  Q
    ||||||||| || |||||    
T  20693013 ctttggtgggtcggaaac 20693030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 21487625 - 21487697
Alignment:
Q  50 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 125  Q
    |||||||| ||||| ||||||||| ||||| |||||||||||||||   | |||  ||||||||||||||||||||    
T  21487625 gttcgattttcaggaggaacaacgtttggctagtgcgcatgcctct---cacgagccggattagtcgcccaccttt 21487697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 35006842 - 35006785
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||||||||||| ||||  || ||||||||||||||| ||||| ||||||||||||||    
T  35006842 aataccgggttccattccgagagggaacaacgcttggtcagtgtgcatgcctctacgc 35006785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 1826864 - 1826932
Alignment:
Q  49 ggttcgattctcagggggaa-caacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 116  Q
    ||||||||||||||| |||| ||||||||||||| ||| |||||||||  || |||||| |||||||||    
T  1826864 ggttcgattctcaggaggaaacaacgcttggccactgcacatgcctctgagcacgaatcagattagtcg 1826932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 20590020 - 20590056
Alignment:
Q  63 ggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||||||||||||||||||||||||||| ||||||||    
T  20590020 ggggaacaacgcttggccagtgcgcatgactctacgc 20590056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 21375373 - 21375453
Alignment:
Q  64 gggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaactagtg 144  Q
    |||||||||  ||| ||||||||||||| |||||||  || |||||||||||| ||| ||||| |||||| ||||| ||||    
T  21375373 gggaacaacatttgaccagtgcgcatgcttctacgcatgagtcggattagtcgtccatctttgatggatcggaaaccagtg 21375453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 25467419 - 25467467
Alignment:
Q  51 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||| ||||| ||||||||| ||||||||| |||||||||||||||    
T  25467419 ttcgattttcaggaggaacaacgattggccagtacgcatgcctctacgc 25467467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 7336644 - 7336710
Alignment:
Q  66 gaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggat 132  Q
    |||||||||||   |||||||||||||||||||| |||  ||||||| ||| | |||||||||||||    
T  7336644 gaacaacgctttatcagtgcgcatgcctctacgcacgagccggattaatcgtctacctttggtggat 7336710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 20516498 - 20516460
Alignment:
Q  52 tcgattctcagggggaacaacgcttggccagtgcgcatg 90  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  20516498 tcgatttttagggggaacaacgcttggccagtgcgcatg 20516460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 18045629 - 18045694
Alignment:
Q  32 gtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 97  Q
    ||||||||  ||||| ||||||||||| ||||||||||||| |||||   || |||||||||||||    
T  18045629 gtatccggggaatactgggttcgattcccagggggaacaacccttggttggtacgcatgcctctac 18045694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 20705563 - 20705620
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||| ||| ||| ||| |||||| |||||||| |||| ||||||||||||||||||||    
T  20705563 aatatcggattcaattttcagggagaacaacgtttggtcagtgcgcatgcctctacgc 20705620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 38297071 - 38297014
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||||||||||| |||| || ||||||||||| |||| |||||||||| | |||||||    
T  38297071 aataccgggttcaattcccaaggggaacaacgtttggtcagtgcgcattcttctacgc 38297014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 5253356 - 5253233
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||| ||    
T  5253356 agctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatc 5253257  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    ||||||||||||||| || |||||    
T  5253256 gcccacctttggtgggtcggaaac 5253233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 3588073 - 3587954
Alignment:
Q  21 attccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgccca 120  Q
    ||||||| || ||||||||| ||||||||||||||||| || ||||||||||||||||||||||| ||| |||||||||  ||| ||||||||||| | |    
T  3588073 attccaaagacgtatccggagaataccgggttcgattcccaaggggaacaacgcttggccagtgcacatacctctacgcatgaaccggattagtcgtcaa 3587974  T
Q  121 cctttggtggatcagaaact 140  Q
    |||||| |||||| ||||||    
T  3587973 cctttgatggatcggaaact 3587954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 6606230 - 6606107
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||  ||  ||||||||||    
T  6606230 agctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgagccggattagtc 6606131  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||| ||||||| || |||||    
T  6606130 gtccaccattggtgggtcggaaac 6606107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 8612107 - 8611984
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  |||||||||||||||||  ||| ||||||||||||| |||||| |||||| |||||||  ||| ||||||||||    
T  8612107 agctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtc 8612008  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    ||||||||||||||| ||||||||    
T  8612007 gcccacctttggtgggtcagaaac 8611984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 21898625 - 21898748
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||  ||  ||||||||||    
T  21898625 agctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 21898724  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    |  ||||||| |||| || |||||    
T  21898725 gttcacctttagtgggtcggaaac 21898748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 3601087 - 3601184
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| | |||  ||||||||||| ||||||||||||| || |||||    
T  3601087 aataccggtttcgattctcagggggaacaacgcttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaac 3601184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 12606407 - 12606520
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||| | ||||||||  |||||| | |||||||  |||||||||||||| ||||||||||||||||||||||||| |||  ||||||||||    
T  12606407 agctccttccaagaacgtatccggggaataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagtc 12606506  T
Q  116 gcccacctttggtg 129  Q
    ||||||||||||||    
T  12606507 gcccacctttggtg 12606520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 30788984 - 30788863
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||||||||||||  |||| |||||| |||||||| ||  ||||||| |||||||||||||||||||||| || |||  ||||||||||    
T  30788984 agctccttccaaggatgtatccggggaatatcgggtttgattctcatgg--aacaacgtttggccagtgcgcatgcctctaggcacgagccggattagtc 30788887  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    ||||||||||||||| || |||||    
T  30788886 gcccacctttggtgggtcggaaac 30788863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 10311602 - 10311488
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||| | ||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||| ||| |  ||||||||    
T  10311602 agctccttccaagaacgtatccggggaataccgggttcgatcctcaaggggaacaacgcttggccagtgcgcatgtctctacgcacgagttagattagtc 10311503  T
Q  116 gcccacctttggtgg 130  Q
    || |||| |||||||    
T  10311502 gctcaccattggtgg 10311488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 2271434 - 2271308
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||| |||  ||||||||||||||||||||| |  |||||||||| ||||||||||||| |||||||| |||  ||||||||||    
T  2271434 agctccttccaaggacgtattcggggaataccgggttcgattctcagag--aacaacgcttagccagtgcgcatgtctctacgcacgagccggattagtc 2271337  T
Q  116 gcccacctttggtggatcagaaactagtg 144  Q
    | ||||||||| ||| |||||||| ||||    
T  2271336 gtccacctttgatgggtcagaaaccagtg 2271308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 8932644 - 8932761
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||||||||||||  |||| |||||||||||| ||||||||||||| |||||| |||||||||||||||||||  ||  ||||||| || |||||    
T  8932644 ttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccac 8932743  T
Q  122 ctttggtggatcagaaac 139  Q
    ||||| ||| || |||||    
T  8932744 ctttgatgggtcggaaac 8932761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 8944110 - 8944227
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||||||||||||  |||| |||||||||||| ||||||||||||| |||||| |||||||||||||||||||  ||  ||||||| || |||||    
T  8944110 ttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccac 8944209  T
Q  122 ctttggtggatcagaaac 139  Q
    ||||| ||| || |||||    
T  8944210 ctttgatgggtcggaaac 8944227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 12635787 - 12635914
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    |||| |||| ||||||||| ||||||||  |||||| |||| ||||| |||||| ||||||||||||| ||||||||||||||||||| | |  ||||||    
T  12635787 aagatgctccttccaaggacgtatccggggaataccaggtttgattcccaggggaaacaacgcttggctagtgcgcatgcctctacgcacaagccggatt 12635886  T
Q  112 agtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||  ||||||| || |||||    
T  12635887 agtcgcccactattggtgggtcggaaac 12635914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 19089475 - 19089598
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    |||||||| |||||| |||||||   |||||| |||| ||||| ||||||||||||| ||||||||||| |||||||||||||| |||  ||||||||||    
T  19089475 agctcatttcaaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtgagcatgcctctacgcacgagccggattagtc 19089574  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | | ||||||||||| || |||||    
T  19089575 gtctacctttggtgggtcggaaac 19089598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 9633708 - 9633635
Alignment:
Q  66 gaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||| || |||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaac 9633635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 144
Target Start/End: Complemental strand, 29444871 - 29444770
Alignment:
Q  43 ataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaactag 142  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||||||||  ||  ||||||||| | ||| ||||||||| || ||||||||    
T  29444871 ataccgggttcgatttctagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaactag 29444772  T
Q  143 tg 144  Q
    ||    
T  29444771 tg 29444770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 13036137 - 13036054
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| ||||||||| |||| |||  |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  13036137 agctccttccaaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgcatgcctctacgc 13036054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 9179869 - 9179747
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||||| ||| || |  ||||||||||||||||| ||||||||||||| |||| |||||  |||| |||||||||  ||   |||||||||    
T  9179869 agctcattccaaggacgtacccagggaataccgggttcgattcccagggggaacaacacttgaccagtatgcatacctctacgcatgagctggattagtc 9179770  T
Q  116 gcccacctttggtggatcagaaa 138  Q
    | |||||||||||||||| ||||    
T  9179769 gtccacctttggtggatcggaaa 9179747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 11142576 - 11142694
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    |||||||||||||||||||  || |||| |||||||| ||||||||| ||| || ||||||| ||| |||||||||||||||||||||  || || ||||    
T  11142576 aagaagctcattccaaggacatacccgggaaataccgagttcgattcgcagtggaaacaacgtttgaccagtgcgcatgcctctacgcatgagtcagatt 11142675  T
Q  112 agtcgcccacctttggtgg 130  Q
    ||| | ||| |||||||||    
T  11142676 agttgtccaactttggtgg 11142694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 13468910 - 13469024
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  |||||| ||||| ||||  ||||||||||||| |||| |||||| ||||||||||||| |||  | ||||||||    
T  13468910 agctccttccaaggacgtatccggggaataccaggttcaattcctagggggaacaacgattggtcagtgcacatgcctctacgcacgagccagattagtc 13469009  T
Q  116 gcccacctttggtgg 130  Q
    ||||||| |||||||    
T  13469010 gcccaccattggtgg 13469024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 5029825 - 5029918
Alignment:
Q  47 cgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 140  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||||||  || | |||||||||||||| ||||| ||| || ||||||    
T  5029825 cgggttcgattctcagggagaacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaact 5029918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 14107491 - 14107387
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||| || |||| |||  ||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||||||  ||  ||||||||||    
T  14107491 agctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgcacatgcctctacgcatgagccggattagtc 14107392  T
Q  116 gccca 120  Q
    |||||    
T  14107391 gccca 14107387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 34954752 - 34954629
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| | ||  |||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||||  ||  | ||||||||    
T  34954752 agctccttccaaggacgtacctggggaataccaggttcgattctcagggggaacaacgtttggccagtgcacatacctctacgcatgagccagattagtc 34954653  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||||||| ||| || |||||    
T  34954652 gtccacctttgatgggtcggaaac 34954629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 9366556 - 9366445
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||||||||||   ||  |||| | ||||||||| | |||||||| |||||||||||||||||||||||||||||| |||  |||||||| |    
T  9366556 agctccttccaaggatgtacttggggaatatcaggttcgatttttagggggaataacgcttggccagtgcgcatgcctctacgcacgagccggattagac 9366457  T
Q  116 gcccacctttggt 128  Q
    | |||||||||||    
T  9366456 g-ccacctttggt 9366445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 33859427 - 33859369
Alignment:
Q  41 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||||||||||| | ||||||||||||| ||| |||||||||||||||||||||    
T  33859427 aaataccgggttcgatttttagggggaacaacgtttgcccagtgcgcatgcctctacgc 33859369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 9147273 - 9147361
Alignment:
Q  11 gaagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||| ||||||||||||||| ||| | ||  |||| |||||||||||| |||||||||| || |||| ||||||| |||||||||||||    
T  9147273 gaaggagctcattccaaggacgtacctggggaatatcgggttcgattcccagggggaacgacacttgaccagtgcacatgcctctacgc 9147361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 29333271 - 29333160
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| || |  ||||||||||||||||  |||||| ||||||| |||||||||||||||||||||||||  ||  || || ||||    
T  29333271 agctccttccaaggacgtacccagggaataccgggttcgatttccagggg-aacaacgtttggccagtgcgcatgcctctacgcatgagccgaatcagtc 29333173  T
Q  116 gcccacctttggt 128  Q
    | |||||||||||    
T  29333172 gtccacctttggt 29333160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 24671999 - 24671916
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| || |||||| ||||| ||| |||||||||||| |||| ||| ||||||||| |||| |||||| ||||||||||||||    
T  24671999 agctcctttcaaggacgtatctggagaataccgggttctattcccagagggaacaacacttgaccagtgtgcatgcctctacgc 24671916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 8888910 - 8888976
Alignment:
Q  67 aacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    ||||||| ||||||||||||||| |||||||||  || |||||||||||| ||||||||| ||||||    
T  8888910 aacaacgtttggccagtgcgcatacctctacgcatgagtcggattagtcgtccacctttgatggatc 8888976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 13391290 - 13391367
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgccca 120  Q
    |||| ||| ||||||| ||||||| ||||| | ||||||||||||||||||||||||| |||  |||||||||||||||    
T  13391290 aatatcggattcgattttcagggg-aacaatgtttggccagtgcgcatgcctctacgcacgagccggattagtcgccca 13391367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 13627257 - 13627336
Alignment:
Q  49 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggt 128  Q
    |||| ||||||||||  ||| ||||||||| |||| ||||||||||||||  | ||||| |||||||||| |||||||||    
T  13627257 ggtttgattctcaggaagaagaacgcttggtcagttcgcatgcctctacgtacaaatcgaattagtcgcctacctttggt 13627336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 15643961 - 15643853
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||||| ||||| || || || |||||||||||| |||||| |||||| || ||||| |||||||    ||||||  || |||||||||||    
T  15643961 agctcattccaaggacgtatctgggaa-taacgggttcgattcacagggg-aacaacactaggccaatgcgcat----ctacgcatgagtcggattagtc 15643868  T
Q  116 gcccacctttggtgg 130  Q
    |||||||||| ||||    
T  15643867 gcccacctttagtgg 15643853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 17114981 - 17114920
Alignment:
Q  65 ggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 126  Q
    ||||||||||||||||| ||  |||||||||||||  ||  |||||||||||||||||||||    
T  17114981 ggaacaacgcttggccaatggacatgcctctacgcatgagccggattagtcgcccacctttg 17114920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 30410456 - 30410505
Alignment:
Q  50 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||||||||||||| |||||||| |||  |||||||||||||||||||||    
T  30410456 gttcgattctcaggaggaacaacacttaaccagtgcgcatgcctctacgc 30410505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 31129193 - 31129237
Alignment:
Q  55 attctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||| |||||||| ||||||||||| |||||||||||||||||||    
T  31129193 attcacagggggagcaacgcttggctagtgcgcatgcctctacgc 31129237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 32157252 - 32157177
Alignment:
Q  64 gggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||| |||| ||||||||||| |||||||||  ||  | ||||||||  ||| ||||||||||||||||||    
T  32157252 gggaacaacacttgaccagtgcgcatacctctacgcatgagccagattagtcatccatctttggtggatcagaaac 32157177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 19230665 - 19230592
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 116  Q
    |||||||| ||||||| ||| ||| |||||||||||| ||||  |||||||||||||| |||  |||||||||||    
T  19230665 aataccggattcgattttcaaggg-aacaacgcttggtcagtatgcatgcctctacgcacgagccggattagtcg 19230592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 2105213 - 2105156
Alignment:
Q  26 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagt 83  Q
    ||||| ||| |||| |||||||||||||||||   ||||| |||||||||||||||||    
T  2105213 aaggacgtacccgggaaataccgggttcgatttctaggggaaacaacgcttggccagt 2105156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 10312745 - 10312801
Alignment:
Q  41 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 97  Q
    |||||||||||||||||| ||||| ||| |||| |||| || || ||||||||||||    
T  10312745 aaataccgggttcgattcccagggagaataacgtttgggcaatgtgcatgcctctac 10312801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 33940014 - 33940098
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 126  Q
    ||||| ||||| |||||||||| |||||||  |||  ||| ||||||||||||||| | |||  ||||||||||| ||| |||||    
T  33940014 aatactgggtttgattctcaggaggaacaatacttaaccattgcgcatgcctctacacacgagccggattagtcgtccatctttg 33940098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 33498963 - 33498856
Alignment:
Q  26 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 125  Q
    ||||||||| | |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||  ||  ||||||||||| ||||||||    
T  33498963 aaggatgtacctggaaaataccgggttcgattctcaggaggagcaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccttt 33498864  T
Q  126 ggtggatc 133  Q
    | ||||||    
T  33498863 gatggatc 33498856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 43959954 - 43959832
Alignment:
Q  17 gctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 116  Q
    |||| |||||| || ||| ||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  43959954 gctccttccaatgacgtacccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcg 43959855  T
Q  117 cccacctttggtggatcagaaac 139  Q
    ||||||||| ||||||| |||||    
T  43959854 cccacctttagtggatcggaaac 43959832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 37339799 - 37339908
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcaggggga-acaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgccca 120  Q
    ||||||||||||| ||||  ||||||||||||||||| |||||||  ||||||||||||||||||||||||||| |||| |||  |||||||||||||||    
T  37339799 ttccaaggatgtacccggggaataccgggttcgattcccagggggggacaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgccca 37339898  T
Q  121 cctttggtgg 130  Q
    ||||||||||    
T  37339899 cctttggtgg 37339908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 17642138 - 17642014
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||| ||| ||| || | |||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||  ||||||||||    
T  17642138 agctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtc 17642039  T
Q  116 gcccacctttggtggatcagaaact 140  Q
    | ||||||||||||| || ||||||    
T  17642038 gtccacctttggtgggtcggaaact 17642014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 9853411 - 9853289
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||||||| |||||||||||||||||||||||  ||||| ||||||| ||  ||||||||||||||||||| | |||| | ||||| ||    
T  9853411 agctccttccaaggatgtacccggaaaataccgggttcgattcctaggggaaacaacgttttaccagtgcgcatgcctctacacacgaaccagattaatc 9853312  T
Q  116 gcccacctttggtggatcagaaa 138  Q
    | ||||||||||||| |||||||    
T  9853311 gtccacctttggtgggtcagaaa 9853289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 11398022 - 11397909
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||||||||||||| |||||||||||||||||  ||||| ||||||| ||||||| |||| ||||||||||||  || |||||||||||    
T  11398022 agctccttccaaggatgtatccggagaataccgggttcgattccgagggg-aacaacgtttggccaatgcgtatgcctctacgcatgagtcggattagtc 11397924  T
Q  116 gcccacctttggtgg 130  Q
    | |||||||||||||    
T  11397923 gtccacctttggtgg 11397909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 10336490 - 10336607
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||| || ||||||||| |||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||  ||  ||||||| ||    
T  10336490 agctccttccaaagacgtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattaatc 10336589  T
Q  116 gcccacctttggtggatc 133  Q
    | ||||||||| ||||||    
T  10336590 gtccacctttgatggatc 10336607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 18649486 - 18649370
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||| ||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||  |||  | ||||| ||    
T  18649486 agctccttccaaggacgtatctggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgtacgagccagattaatc 18649387  T
Q  116 gcccacctttggtggat 132  Q
    |||||||||| ||||||    
T  18649386 gcccacctttagtggat 18649370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 18915847 - 18915955
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| ||| ||||  ||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| |||  |||||||||||| |||    
T  18915847 ttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgctcac 18915946  T
Q  122 ctttggtgg 130  Q
    | |||||||    
T  18915947 cattggtgg 18915955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 5855496 - 5855619
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||| |||  ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||  ||  ||||||||||    
T  5855496 agctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaggcggattagtc 5855595  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    |  ||||||| |||| || |||||    
T  5855596 gttcacctttagtgggtcggaaac 5855619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 8763965 - 8764088
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  |||| |||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||  ||||||||||    
T  8763965 agctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtc 8764064  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||| ||||||| || |||||    
T  8764065 gtccaccgttggtgggtcggaaac 8764088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 14254400 - 14254279
Alignment:
Q  18 ctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgc 117  Q
    ||||||||||||| |||| |||  ||||||| |||||||| ||||||||||||||||||||||||| ||||||||| |||||  ||  |||||||||||     
T  14254400 ctcattccaaggacgtattcggggaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcatgagccggattagtcgt 14254301  T
Q  118 ccacctttggtggatcagaaac 139  Q
    ||||||||| ||| || |||||    
T  14254300 ccacctttgatgggtcggaaac 14254279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 16956440 - 16956568
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  ||||||| ||||| |||||||||| ||||||| ||| ||||||||||||||||||||| |||  ||||||||||    
T  16956440 agctccttccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcctctacgcacgagccggattagtc 16956539  T
Q  116 gcccacctttggtggatcagaaactagtg 144  Q
     | |||||||||||| || ||||| ||||    
T  16956540 actcacctttggtgggtcggaaaccagtg 16956568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 33418249 - 33418137
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||| || ||| ||||| |||||||| ||||||||  |||||| ||||||||||||||||||||||||||||| || |||  ||||||||||    
T  33418249 agctccttccaaagacgtacccggagaataccggattcgattcctaggggggacaacgcttggccagtgcgcatgcctctatgcacgagccggattagtc 33418150  T
Q  116 gcccacctttggt 128  Q
    | |||||||||||    
T  33418149 gtccacctttggt 33418137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 34334429 - 34334353
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcc 92  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  34334429 agctcattccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcc 34334353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 2567250 - 2567373
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||| |||| |||||||||||||||| || |||  ||||||||||||||||||||||||||||||| | ||| || |||||| |    
T  2567250 agctccttccaaggacgtattcggagaataccgggttcgattttcggggaaaacaacgcttggccagtgcgcatgcctctactcacgagtcagattagcc 2567349  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||| ||||||||| || |||||    
T  2567350 gtccatctttggtgggtcggaaac 2567373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 17092615 - 17092488
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||| || || ||| |||| ||| ||||| || |||||||| ||||||| ||||||| |||||||||| | |||||||||||| |||  ||||||    
T  17092615 aagaagctcctttcatggacgtattcgggaaatatcgagttcgattttcaggggaaacaacgattggccagtgtgtatgcctctacgcacgagccggatt 17092516  T
Q  112 agtcgcccacctttggtggatcagaaac 139  Q
    ||||| ||||||||||| ||||||||||    
T  17092515 agtcgtccacctttggtagatcagaaac 17092488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 41663990 - 41663867
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||| ||||| ||||||||  ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||  ||   |||||||||    
T  41663990 agctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagtc 41663891  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||| ||||||| || |||||    
T  41663890 gtccaccattggtgggtcggaaac 41663867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 50371968 - 50371845
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||| ||||||||||| | |||||| || |||||||| |||||  |||||||||||||||||| ||||||| ||||||| | |  ||||||||||    
T  50371968 agctccttctaaggatgtatctgaaaaatagcgtgttcgattttcaggaagaacaacgcttggccagtacgcatgcttctacgcacaagccggattagtc 50371869  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    ||||| |||||||||||| |||||    
T  50371868 gcccatctttggtggatcggaaac 50371845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 50503495 - 50503372
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| || |||||| ||||||||  |||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||||| |||  |||||| |||    
T  50503495 agctcctttcaaggacgtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatgcctctacgcacgagccggatttgtc 50503396  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    |||||||  |||||| || |||||    
T  50503395 gcccaccaatggtgggtcggaaac 50503372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 138
Target Start/End: Complemental strand, 12036882 - 12036756
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||| ||||||||| ||| |  || ||||| ||||| |||||  ||||||||||| ||||||||||||||||||||||||||| |||  | ||||    
T  12036882 aagaagctccttccaaggacgtacctagagaatactgggtttgattcctagggggaacaatgcttggccagtgcgcatgcctctacgcacgagccagatt 12036783  T
Q  112 agtcgcccacctttggtggatcagaaa 138  Q
    | ||| |||||||||||||||| ||||    
T  12036782 aatcgtccacctttggtggatcggaaa 12036756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 2981065 - 2980965
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||| ||| ||||||||  ||||| ||||||||||| ||| ||||||||| ||||||||||| |||||||||||||| ||| |||||||||||    
T  2981065 agctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgtgcatgcctctacgcacgagtcggattagtc 2980966  T
Q  116 g 116  Q
    |    
T  2980965 g 2980965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 15238214 - 15238126
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    |||| |||||||||||| |||||||| ||||||||||||| || |||||||||||||| ||||||  ||||||||| ||||||||||||    
T  15238214 aatatcgggttcgattcccagggggagcaacgcttggccaatgagcatgcctctacgcacgaatcatattagtcgctcacctttggtgg 15238126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 34719750 - 34719874
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| | ||  ||||| ||||||||||| ||  ||||| |||||||| ||||||||||||||||||||| ||| || ||||||||    
T  34719750 agctccttccaaggacgtacctggggaatactgggttcgattcccactgggaataacgcttgaccagtgcgcatgcctctacgcacgagtcagattagtc 34719849  T
Q  116 gcccacctttggtggatcagaaact 140  Q
    || |||||||||||| || ||||||    
T  34719850 gctcacctttggtgggtcggaaact 34719874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 49078088 - 49078188
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||| ||||| ||||||||  ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||  ||  ||||||||||    
T  49078088 agctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 49078187  T
Q  116 g 116  Q
    |    
T  49078188 g 49078188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 30927861 - 30927738
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| | || ||||| |||||||||||  ||| |||||||||||||||||| || ||||||||||||||  ||  ||||||||||    
T  30927861 agctccttccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctctacgcatgagccggattagtc 30927762  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | |||| |||||||| ||||||||    
T  30927761 gtccacttttggtgggtcagaaac 30927738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 31576681 - 31576598
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||| ||||  |||||||||||    
T  31576681 agctcattctaaggacgtatcccgaaaataccgggttcgattctcaggggaaacaatgcttggccaatgcgtgtgcctctacgc 31576598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 32142979 - 32142857
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||||| ||| || | || |||||||||||||| |||||||||||||| |||||||||||||||||||| |||||  ||  || |||||||    
T  32142979 agctcattccaaggacgtaccctggaa-taccgggttcgattttcagggggaacaacacttggccagtgcgcatgcctttacgcatgagccgaattagtc 32142881  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    || |||||||| ||| || |||||    
T  32142880 gctcacctttgatgggtcggaaac 32142857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 45362016 - 45361933
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| ||||||||| ||| || |  |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  45362016 agctccttccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgc 45361933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 15465940 - 15466062
Alignment:
Q  17 gctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 116  Q
    |||| ||||||||| ||||  ||  |||||| |||||||||  ||||||||||||||||||| |||||| ||||||||||||| ||| || |||| ||||    
T  15465940 gctccttccaaggacgtatttggggaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgcacgagtctgattggtcg 15466039  T
Q  117 cccacctttggtggatcagaaac 139  Q
    | |||||||||||| || |||||    
T  15466040 ctcacctttggtgggtcggaaac 15466062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 33004149 - 33004043
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  |||| ||| |||||||  |||||| ||||| ||||||||||||||||||||||||||| |||  ||||||||||    
T  33004149 agctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgcgcatgcctctacgcacgagccggattagtc 33004050  T
Q  116 gcccacc 122  Q
     ||||||    
T  33004049 acccacc 33004043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 42710266 - 42710149
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    |||||| || |||||| ||||||| ||||||||||| ||||||| |||||  ||||||||||||||||||||||||||   || || |||||||| ||||    
T  42710266 ttccaaagacgtatccagaaaatatcgggttcgattttcaggggaaacaatacttggccagtgcgcatgcctctacgcataaaccgaattagtcgtccac 42710167  T
Q  122 ctttggtggatcagaaac 139  Q
    | ||||| |||| |||||    
T  42710166 cattggtagatcggaaac 42710149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 10422762 - 10422874
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||| || |||| |||  ||||||||||||||||   ||| |||||||| ||||||||||||||||||||||||||  ||  ||||||||||    
T  10422762 agctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 10422861  T
Q  116 gcccacctttggt 128  Q
    | |||||||||||    
T  10422862 gtccacctttggt 10422874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 40288611 - 40288483
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||| |||  ||||||||||||||||  |||||||||||||| |||||||||  |||||||||||| | |||  ||||||||||    
T  40288611 agctctttccaaggacgtattcggggaataccgggttcgatttccagggggaacaacggttggccagtatgcatgcctctacacacgagccggattagtc 40288512  T
Q  116 gcccacctttggtggatcagaaactagtg 144  Q
    || || | ||||||| || ||||| ||||    
T  40288511 gctcatccttggtgggtcggaaaccagtg 40288483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 6563415 - 6563498
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| ||||||||||||| ||| | || ||||||||||||||  ||||||||||||||||||||||||| |||| ||||||||    
T  6563415 agctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctctacgc 6563498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 26325786 - 26325909
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| || |||||| |||||||   |||| |||||||||||| ||| ||||||||| ||||| ||||||||||||||||||||  ||  ||||||||||    
T  26325786 agctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtc 26325885  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||| ||||||| || |||||    
T  26325886 gtccaccattggtgggtcggaaac 26325909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 31152690 - 31152803
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||||||| || |  ||||||||||||||||  | ||||||| ||||||||| |||||||| ||||||||| | ||| ||  |||||||    
T  31152690 agctctttccaaggatgtacccagggaataccgggttcgatttcccgggggaataacgcttggtcagtgcgcgtgcctctacacacgagtcaaattagtc 31152789  T
Q  116 gcccacctttggtg 129  Q
    | ||||||||||||    
T  31152790 gtccacctttggtg 31152803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 34697335 - 34697419
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 126  Q
    |||||| ||||||||||| |||||||||||| |||||| |||| ||||||||||||||  ||  |||||||||||||||| ||||    
T  34697335 aataccaggttcgattcttagggggaacaacacttggctagtgtgcatgcctctacgcatgagccggattagtcgcccacttttg 34697419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 17358605 - 17358522
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||||||| |||||| ||||  ||  ||||||||||||||||||||||| |||||||||||| ||| ||||||||||| |||||    
T  17358605 agctcatttcaaggacgtatttggggaataccgggttcgattctcagggagaacaacgcttgaccaatgcgcatgcctttacgc 17358522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 21849307 - 21849225
Alignment:
Q  47 cgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||||||||||| |||  |||||||||||| |||  |||||||    
T  21849307 cgggttcgattcccagggg-aacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgctcactattggtgg 21849225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 48798204 - 48798121
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| |||||| || ||||||||  |||| |||||||||||  |||||||||||||||||| | |||||||||||||||||||    
T  48798204 agctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgcgcatgcctctacgc 48798121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 9659312 - 9659199
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||| ||||| |||  |||  ||||||||||||||||| |||||| ||||||| ||| | ||||||||||||| |||||  ||  ||||||||||    
T  9659312 agctcattctaaggacgtactcggggaataccgggttcgattcccagggg-aacaacgtttgactagtgcgcatgcctttacgcatgagccggattagtc 9659214  T
Q  116 gcccacctttggtgg 130  Q
    | |||||||||||||    
T  9659213 gtccacctttggtgg 9659199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 10173104 - 10172982
Alignment:
Q  17 gctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 116  Q
    |||| ||||||||| ||||| ||  |||||||| ||| |||| ||    |||||||||||||||||||| |||||||||||||  ||  ||||||| |||    
T  10173104 gctccttccaaggacgtatctggggaataccggattcaattcccataaagaacaacgcttggccagtgcccatgcctctacgcatgagccggattactcg 10173005  T
Q  117 cccacctttggtggatcagaaac 139  Q
    |||||||||||||| || |||||    
T  10173004 cccacctttggtgggtcggaaac 10172982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 16263528 - 16263602
Alignment:
Q  25 caaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||||| ||||| ||  |||||| |||||||||  |||| |||||||||||||||||||||||||||||||||||    
T  16263528 caaggacgtatctggggaataccaggttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgc 16263602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 44969664 - 44969761
Alignment:
Q  41 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||| ||||||||||||||| | |||||||||||||||||| ||||||| ||||||  ||  ||||||||||| ||| | |||||||||| |||||    
T  44969664 aaataccaggttcgattctcaggag-aacaacgcttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtggatcggaaac 44969761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 41696701 - 41696608
Alignment:
Q  47 cgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 140  Q
    |||||||||||  ||||||||  ||| |||| |||||| | |||||||||||| |||||| |||||||||| |||||||| |||||| ||||||    
T  41696701 cgggttcgatttccagggggattaacacttgaccagtgtgtatgcctctacgcacgaatcagattagtcgctcacctttgatggatcggaaact 41696608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 45536688 - 45536765
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||||| || ||| ||||| ||||||||||||||||   | ||||||||||||||||||||||| |||||||||||||    
T  45536688 ttccaatgacgtacccggagaataccgggttcgatttctaaggggaacaacgcttggccagtgcacatgcctctacgc 45536765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 5063981 - 5063866
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||| ||||||||| ||||| ||  ||||  || ||||||||| ||||| | |||||||||||||||||| ||| ||||| || |||   |||||    
T  5063981 aagaagctccttccaaggacgtatctggggaatattggattcgattcttaggggca-caacgcttggccagtgcgtatgtctctatgcacgagctggatt 5063883  T
Q  112 agtcgcccacctttggt 128  Q
    |||||||||||||||||    
T  5063882 agtcgcccacctttggt 5063866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 13262063 - 13262163
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||||||||  ||  ||||||||||||||||  ||||| |||||||| |||| || | |||||| |||||||| ||| |||||||||||| ||||    
T  13262063 ttccaaggatgtatatggggaataccgggttcgatttccagggagaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcgtccac 13262162  T
Q  122 c 122  Q
    |    
T  13262163 c 13262163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 34877970 - 34878045
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 97  Q
    ||||||||| |||| |||  |||||| ||||||||||  ||| |||||||| ||||||||||||||||||||||||    
T  34877970 ttccaaggacgtattcggggaataccaggttcgattcctaggcggaacaacacttggccagtgcgcatgcctctac 34878045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 45726541 - 45726450
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    |||||| ||||||||||||||| |||| |||  |||||||||||| ||| ||||||||  ||  |||||||||||  |||||||||||||||    
T  45726541 aatacctggttcgattctcaggaggaataacatttggccagtgcgtatgtctctacgcatgagccggattagtcgttcacctttggtggatc 45726450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 8905284 - 8905211
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatg 90  Q
    ||||| |||||| || ||||||||| |||| ||||| ||||| ||| ||||||||||||||||||||||||||||    
T  8905284 agctccttccaatgacgtatccggagaatatcgggtacgatt-tcaaggggaacaacgcttggccagtgcgcatg 8905211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 48761156 - 48761262
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||| |||||||| | |||||| || ||||||| ||| | ||||||||| |||| |||||  ||||||||||||| |||   |||||||||| ||||    
T  48761156 ttccaagaatgtatcccggaaatactggattcgattttcaagaggaacaacgtttggtcagtggacatgcctctacgcacgagctggattagtcgtccac 48761255  T
Q  122 ctttggt 128  Q
    |||||||    
T  48761256 ctttggt 48761262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 4581758 - 4581693
Alignment:
Q  74 cttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||||||||||||||||||| |||  |||| |||||| ||||||||||||| || |||||    
T  4581758 cttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaac 4581693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 12744622 - 12744534
Alignment:
Q  51 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||  ||  || ||||||||| |||  ||||||| ||||||||    
T  12744622 ttcgattttcagggggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcgctcactgttggtgggtcagaaac 12744534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 12755612 - 12755524
Alignment:
Q  51 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||  ||  || ||||||||| |||  ||||||| ||||||||    
T  12755612 ttcgattttcagggggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcgctcactgttggtgggtcagaaac 12755524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 31734269 - 31734344
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacg 98  Q
    ||||||||||||| |||   ||||| || ||||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  31734269 ttccaaggatgtacccgaggaatactggattcgattct-aggggaaacaacgattggccagtgcgcatgcctctacg 31734344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 32845 - 32928
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| ||||||||| ||| | ||  |||| ||||| |||||| |||| |||||||||||||| |||||| |||||||||||||    
T  32845 agctccttccaaggacgtaccgggggaatatcgggtccgattcccaggaggaacaacgcttggtcagtgcacatgcctctacgc 32928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 38859219 - 38859140
Alignment:
Q  47 cgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 126  Q
    |||||||||||| |||||| ||||| | |||| || ||| ||||||||||||| ||| || ||||| |||||||||||||    
T  38859219 cgggttcgattcccaggggtaacaatgtttggtcaatgcacatgcctctacgcacgagtcagattaatcgcccacctttg 38859140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 892431 - 892314
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| || |||||| |||| |||  |||||||||||||||||  |||||||||||| ||| |||| || |||||||     ||  ||  ||||||||||    
T  892431 agctcctttcaaggacgtattcggggaataccgggttcgattcctagggggaacaacacttagccaatgtgcatgcc-----gcatgagccggattagtc 892337  T
Q  116 gcccacctttggtggatcagaaa 138  Q
    |||||||||||||||||| ||||    
T  892336 gcccacctttggtggatcggaaa 892314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 5504038 - 5504128
Alignment:
Q  49 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||  |||||||||||   ||||| |||||||||||||  ||  ||||||||||| ||||||||| ||| || |||||    
T  5504038 ggttcgattctcagggaaaacaacgcttgattagtgcacatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaac 5504128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 14357735 - 14357825
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatta 112  Q
    ||||||||| ||||| |||||||| | |||||||||  ||   | ||||||| ||| ||||||||||||||||||||| |||| |||||||    
T  14357735 ttccaaggacgtatctggaaaatatcaggttcgatttccaattgaaacaacgtttgaccagtgcgcatgcctctacgcacgaaccggatta 14357825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 26258670 - 26258783
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||| || ||| ||||  |||||||| |||||||||||||  || |||||||||| |||||| ||||||| |||||  || |||||||| ||    
T  26258670 agctccttccaaagacgtacccggggaataccggattcgattctcaggaaga-caacgcttggtcagtgcacatgcctttacgcatgagtcggattaatc 26258768  T
Q  116 gcccacctttggtgg 130  Q
    | |||||||| ||||    
T  26258769 gtccacctttagtgg 26258783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 51437443 - 51437517
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatg 90  Q
    ||||| || |||||| |||||||   |||| |||||||||||| || ||||||||||||||| ||||||||||||    
T  51437443 agctcctttcaaggacgtatccgaggaatatcgggttcgattcccatggggaacaacgcttgaccagtgcgcatg 51437517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 5143239 - 5143171
Alignment:
Q  64 gggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    ||||||||||||||| |||| ||||||||||||||| | |  |||||||||||| |||||||| ||||||    
T  5143239 gggaacaacgcttggtcagtacgcatgcctctacgcac-agacggattagtcgctcacctttgatggatc 5143171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 26660138 - 26660234
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||  || ||||||||||  |||  |||| |||||||||||||||  ||  ||||||||||| ||||||||||||| || |||||    
T  26660138 aataccgggttcgatttccacggggaacaacatttgatcagtacgcatgcctctacgcatgagccggattagtcg-ccacctttggtgggtcggaaac 26660234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 28324688 - 28324631
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||| |||||||||||| | |||| |||||| ||||| ||||||||||||||||||||    
T  28324688 aatatcgggttcgattccccggggaaacaacacttggtcagtgcgcatgcctctacgc 28324631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 35908757 - 35908838
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgctt-ggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacc 122  Q
    |||||||| ||||||| | |||||||||||| ||| || ||||||||||||||||||||  ||  ||||||||||| |||||    
T  35908757 aataccggattcgatttttagggggaacaacactttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacc 35908838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 47313026 - 47312950
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||| ||||| ||  ||||||||||| |||||  ||||| ||||||| |||||||||||| ||||||||||||    
T  47313026 ttccaaggacgtatctggggaataccgggtttgattcctagggg-aacaacgtttggccagtgcgtatgcctctacgc 47312950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 18808272 - 18808316
Alignment:
Q  49 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcct 93  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||    
T  18808272 ggttcaattctcagagggaacaacgcttgaccagtgcgcatgcct 18808316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 25165401 - 25165488
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    |||||||| ||||||| ||||||| |||||| ||  ||||||||||||||||||| || | |  |||||||||| | ||||||||||||    
T  25165401 aataccggattcgattatcagggg-aacaacactctgccagtgcgcatgcctctaggcacaagccggattagtcactcacctttggtgg 25165488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 6899597 - 6899655
Alignment:
Q  81 agtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||| ||||| | |  ||||||||||||||||||||| |||||| |||||    
T  6899597 agtgcgcatgcctttacgcacaagccggattagtcgcccacctttgatggatcggaaac 6899655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 17988767 - 17988694
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 116  Q
    |||||| |||| |||| ||||||  ||||| ||||||||||||||||| |||||||||  ||| |||||||||||    
T  17988767 aataccaggtttgattttcaggga-aacaatgcttggccagtgcgcatacctctacgcatgaaccggattagtcg 17988694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 38791699 - 38791621
Alignment:
Q  61 agggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||| ||||||| ||||| |||||||||||||||||||  ||  || |||||||| ||| ||||| ||||||| ||||    
T  38791699 aggggaaacaacgattggcaagtgcgcatgcctctacgcatgagccgaattagtcgtccatctttgatggatcaaaaac 38791621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 42744801 - 42744835
Alignment:
Q  65 ggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||||||||||||||||||| ||||||||||||||    
T  42744801 ggaacaacgcttggccagtgagcatgcctctacgc 42744835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 13265914 - 13265995
Alignment:
Q  18 ctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||| ||||| |||||||   |||||| ||||||||||  ||||  |||||||  | ||||||||||||||||||||||    
T  13265914 ctcattctaaggacgtatccgaggaatacctggttcgattcctagggaaaacaacgtctagccagtgcgcatgcctctacgc 13265995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 32151023 - 32150946
Alignment:
Q  49 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 126  Q
    |||||||||  |||||||||||||  |||| |||||||||||||| |||||  ||  || ||||||||| ||||||||    
T  32151023 ggttcgatttccagggggaacaacatttggtcagtgcgcatgcctttacgcatgagccgaattagtcgctcacctttg 32150946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 18708648 - 18708564
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 126  Q
    ||||| ||||||||||  |||||| | ||| ||||||| ||||||||||||||||| |  ||  | |||||||||| ||||||||    
T  18708648 aatactgggttcgatttccaggggaagcaatgcttggctagtgcgcatgcctctacacatgagccagattagtcgctcacctttg 18708564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 19195391 - 19195423
Alignment:
Q  67 aacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||| |||||||||||||||||||||||||    
T  19195391 aacaacgtttggccagtgcgcatgcctctacgc 19195423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 50094925 - 50095001
Alignment:
Q  63 ggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||| ||| ||||| ||||||| |||||||  || |||||||||||| ||||| || |||| || |||||    
T  50094925 ggggaacaacgtttgaccagtacgcatgcttctacgcatgagtcggattagtcgtccaccattagtgggtcggaaac 50095001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 30767375 - 30767253
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||||||| | ||  |||| |||||||||||  ||||||||||||| ||||||||||| |||||||||||||| |||  ||||||||||||||||    
T  30767375 ttccaaggatgtacctggggaatatcgggttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgcccac 30767276  T
Q  122 ctttggtggatcagaaactagtg 144  Q
    ||||||||| || ||||||||||    
T  30767275 ctttggtgggtcggaaactagtg 30767253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 49198330 - 49198447
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    |||||||||  |||||||  |||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||| ||||    
T  49198330 ttccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccac 49198429  T
Q  122 ctttggtggatcagaaac 139  Q
    | ||||||||||||||||    
T  49198430 cattggtggatcagaaac 49198447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 7328823 - 7328930
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| ||| |||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||  ||  ||||||||||||||||    
T  7328823 ttccaaggacgtacccgggaaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcct-tacgcatgagccggattagtcgcccac 7328921  T
Q  122 ctttggtgg 130  Q
    |||||||||    
T  7328922 ctttggtgg 7328930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 35315929 - 35316052
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||| |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||   |||||||||    
T  35315929 agctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagctggattagtc 35316028  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    |||||| |||||||| || |||||    
T  35316029 gcccacttttggtgggtcggaaac 35316052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 51060415 - 51060292
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||||||| |||||||  |||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||  |||  |||||||||    
T  51060415 agctccttccaaggatctatccggggaatatcgggttcgattctcagggggaacaacacttggtcagtgcgcatgcctctacgcatgaactggattagtc 51060316  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||| ||||||| || |||||    
T  51060315 gtccaccattggtgggtcggaaac 51060292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 13893899 - 13894016
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| || |||||  ||||||||||| ||||  ||||||||||||||||||| || ||||||||||||||| | |||  ||||||||||    
T  13893899 agctccttccaaggacgtgtccggggaataccgggttggatttccagggggaacaacgcttggtcaatgcgcatgcctctacacacgagccggattagtc 13893998  T
Q  116 gcccacctttggtggatc 133  Q
    ||||||||||||||||||    
T  13893999 gcccacctttggtggatc 13894016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 138
Target Start/End: Original strand, 8164552 - 8164648
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaa 138  Q
    |||||||||||| |||   | ||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| ||||    
T  8164552 aataccgggttcaatttctaaggggaacaacgcttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtggatcggaaa 8164648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 41630646 - 41630534
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||| ||| ||| |||||||||||||||||| |||| || ||||||||||||||| ||||||||||||||||||| |  ||  ||||||||||    
T  41630646 agctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttgcccagtgcgcatgcctctacacatgagccggattagtc 41630547  T
Q  116 gcccacctttggt 128  Q
    |||||||||||||    
T  41630546 gcccacctttggt 41630534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 15320159 - 15320282
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||   ||| ||||||| | |||||||||| |||||||||||||| |||  ||||||||||    
T  15320159 agctccttccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgtgcatgcctctacgcacgagccggattagtc 15320258  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    ||||||||||||||| ||||||||    
T  15320259 gcccacctttggtgggtcagaaac 15320282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 11687247 - 11687161
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacg 98  Q
    ||||||||| ||||||||| ||| | ||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  11687247 aagaagctccttccaaggacgtacctggagaataccgggtttgattctcagggggaacaatgcttggccagtgcgcatgcctctacg 11687161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 30045820 - 30045922
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaacta 141  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||| |||||||| ||| || ||||||||| ||||||||| ||| ||  ||||||    
T  30045820 aataccgggttcgattcctagggggaacaacgcttggccagtgcgcatgtctctacgcacgagtctgattagtcgtccacctttgatgggtcgtaaacta 30045919  T
Q  142 gtg 144  Q
    |||    
T  30045920 gtg 30045922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 28572319 - 28572222
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||| ||||||||||| |||||| |||||||||||||||||  |||||||||||||| |||  ||||||||||||||||||||||||| || |||||    
T  28572319 aatactgggttcgattcccaggggaaacaacgcttggccagtatgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaac 28572222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 35923757 - 35923640
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||||| ||| | ||| |||||| ||||||||||  ||||||||||||| |||||||||||||||||||||| || ||| ||| |||||||    
T  35923757 agctcattccaaggacgtacctggagaataccaggttcgattcatagggggaacaacgtttggccagtgcgcatgcctctaagcacgagtcgaattagtc 35923658  T
Q  116 gcccacctttggtggatc 133  Q
    | ||| ||||| ||||||    
T  35923657 gtccatctttgatggatc 35923640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 6462385 - 6462485
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||| ||  ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  ||  ||||||||||    
T  6462385 agctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 6462484  T
Q  116 g 116  Q
    |    
T  6462485 g 6462485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 139
Target Start/End: Original strand, 26043812 - 26043908
Alignment:
Q  43 ataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||  ||  |||||||||||| |||||||||||  ||||||||    
T  26043812 ataccgggttcgattcccagggagaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgagtcagaaac 26043908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 29135892 - 29136000
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| ||||||||  |||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||  ||||    
T  29135892 ttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcttccac 29135991  T
Q  122 ctttggtgg 130  Q
    | |||||||    
T  29135992 cattggtgg 29136000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 49543492 - 49543616
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||||| |  |||| ||||||||||||||| ||||||||||| |||| ||||| |||||||||||||| |||  || |||||||    
T  49543492 agctccttccaaggacgtatcccgggaatatcgggttcgattctcatggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccgaattagtc 49543591  T
Q  116 gcccacctttggtggatcagaaact 140  Q
    |||||||||| |||| || ||||||    
T  49543592 gcccacctttagtgggtcggaaact 49543616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 51683088 - 51682960
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||| || ||||||||  |||||| |||||||||| |||||||||||||||||| ||||||||||||||||| | | |||  ||||||||||    
T  51683088 agctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctccacacgagccggattagtc 51682989  T
Q  116 gcccacctttggtggatcagaaactagtg 144  Q
    |||||||  |||||| || ||||| ||||    
T  51682988 gcccaccaatggtgggtcggaaaccagtg 51682960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 47219117 - 47219240
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  |||||| |||||||||| || ||| ||||||||||||| |||||||||||||||||||  ||  ||||||||||    
T  47219117 agctctttccaaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgagccggattagtc 47219216  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||||||| ||| || |||||    
T  47219217 gtccacctttgatgggtcggaaac 47219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 48341993 - 48342116
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| | ||  |||||||||||| ||||  ||||||||||||||||||| |||||||||||||||||||  ||| | ||||||||    
T  48341993 agctccttccaaggacgtacctggggaataccgggttctattcctagggggaacaacgcttggctagtgcgcatgcctctacgcatgaaccagattagtc 48342092  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||| |||||||||||| |||||    
T  48342093 gtccatctttggtggatcggaaac 48342116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 50405705 - 50405614
Alignment:
Q  48 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||||  ||||| ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| ||||||| || |||||    
T  50405705 gggttcgattccgaggggaaacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaac 50405614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 53649700 - 53649823
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| |||| |||  ||||||||||||||||||||||| ||||||| |||||||||||||| || ||||||||  ||  ||||||||||    
T  53649700 agctccttccaaggacgtattcggggaataccgggttcgattctcagggtgaacaacacttggccagtgcgcctgtctctacgcatgagccggattagtc 53649799  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    |  |||||||| |||||| |||||    
T  53649800 gttcacctttgatggatcggaaac 53649823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 10040530 - 10040643
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||| ||||| ||| ||||  |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  |||| | |||    
T  10040530 agctccttctaaggacgtacccggggaatatcgggttcgattctcagggg-aacaacgcttggccagtgcgcatgcctctacgcacgagccggaatggtc 10040628  T
Q  116 gcccacctttggtgg 130  Q
    | |||||||||||||    
T  10040629 gtccacctttggtgg 10040643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 10855357 - 10855459
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||||||||||   || |||||||||||| ||||  |||||||||||||||||||||||| ||||||||||||||| |||| || |||||||    
T  10855357 agctccttccaaggatgtacttgggaaataccgggtttgatttccagggggaacaacgcttggccagtacgcatgcctctacgcacgaaccgaattagtc 10855456  T
Q  116 gcc 118  Q
    |||    
T  10855457 gcc 10855459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 25294933 - 25295047
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||||| ||  ||  ||||||||||    
T  25294933 agctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgcgcatgcctctatgcatgagccggattagtc 25295032  T
Q  116 gcccacctttggtgg 130  Q
    | ||||| |||||||    
T  25295033 gtccaccattggtgg 25295047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 42412908 - 42412802
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||| | |||||||||||||||||| ||||| |||||||||||||  ||  ||||||||||    
T  42412908 agctccttccaaggacgtatccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgcccatgcctctacgcatgagccggattagtc 42412809  T
Q  116 gcccacc 122  Q
    || ||||    
T  42412808 gctcacc 42412802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 47749232 - 47749127
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| |||||| |  |||||||||||||||||  ||||| |||||| |||||||||||||||||||||||||| |||  || |||||||||||||    
T  47749232 ttccaaggacgtatccagggaataccgggttcgattcctagggg-aacaactcttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccac 47749134  T
Q  122 ctttggt 128  Q
    |||||||    
T  47749133 ctttggt 47749127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 3507641 - 3507544
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||| |||||  || ||||||||| |||||||||||||||||||||||||| |||  |||||||||||| |||||||||||| || |||||    
T  3507641 aataccgggtttgattcctagagggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaac 3507544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 29127898 - 29128015
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| ||||| ||  |||| |||||||||||  ||||| ||||||| ||||| ||||||||||||||||||||  ||  ||||||||||||||||    
T  29127898 ttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgcccac 29127997  T
Q  122 ctttggtggatcagaaac 139  Q
    ||||||||| || |||||    
T  29127998 ctttggtgggtcggaaac 29128015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 40944852 - 40944976
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||| ||||||||| |||||| || ||||||| ||||||||| ||||||||||||| |||  |||||  ||||||||||||||  | | ||||||    
T  40944852 aagaagctccttccaaggacgtatccagagaataccgagttcgattcccagggggaacaacacttaaccagtatgcatgcctctacgcatg-agcggatt 40944950  T
Q  112 agtcgcccacctttggtggatcagaa 137  Q
    |||||| |||||||||||| ||||||    
T  40944951 agtcgctcacctttggtgggtcagaa 40944976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 49082797 - 49082906
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||| ||||| ||||||||  ||||||| ||||||||| ||||| ||||||||||| |||||||||||||| ||||| | |||||| ||||||||    
T  49082797 agctccttctaaggacgtatccggggaataccgagttcgattcccagggagaacaacgcttagccagtgcgcatgcatctacacacgaatcagattagtc 49082896  T
Q  116 gcccaccttt 125  Q
     |||||||||    
T  49082897 acccaccttt 49082906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 3136831 - 3136716
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||| || |||||| ||| ||||  |||||||| ||||||| ||||||| |||||| ||||| ||||||||||||||||||||  || |||||||    
T  3136831 aagaagctcctttcaaggacgtacccggggaataccggattcgattttcagggg-aacaacacttgggcagtgcgcatgcctctacgcatgagtcggatt 3136733  T
Q  112 agtcgcccacctttggt 128  Q
    ||||| |||||||||||    
T  3136732 agtcgtccacctttggt 3136716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 7650226 - 7650314
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    ||||||||||||||||  ||||||||||||| |||||||||| || ||| |||||||| |||  |||||||||||||||||||||||||    
T  7650226 aataccgggttcgatttccagggggaacaacacttggccagtacgaatgtctctacgcacgagccggattagtcgcccacctttggtgg 7650314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 26207935 - 26207835
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||||||| ||||  ||||||||||||||||| || ||||||||||||||| |||||| ||||||||||||||  ||  ||||||||||    
T  26207935 agctccttccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgtgcatgcctctacgcatgagccggattagtc 26207836  T
Q  116 g 116  Q
    |    
T  26207835 g 26207835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 29762289 - 29762166
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||||||||||| |||  |||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||| ||  ||   |||||||||    
T  29762289 agctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgcgcatgcctctatgcatgagctggattagtc 29762190  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    | ||||| ||||||| || |||||    
T  29762189 gtccaccattggtgggtcggaaac 29762166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 54261199 - 54261322
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| | ||  |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||  ||  ||||||||||    
T  54261199 agctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 54261298  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    |  ||||||| |||| || |||||    
T  54261299 gttcacctttagtgggtcggaaac 54261322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 928573 - 928686
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||||| ||| |  |  |||||| | |||||||||||||||||||||| |||| |||||||||||||| |||||| |||  ||||||||||    
T  928573 agctcattccaaggacgtacctagggaataccagattcgattctcagggggaacaacacttgaccagtgcgcatgccgctacgcacgagccggattagtc 928672  T
Q  116 gcccacctttggtg 129  Q
      ||||||||||||    
T  928673 atccacctttggtg 928686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 31072851 - 31072963
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| || |||||| ||| ||||| |||||| |||||||||  ||||||||||||||||||| |||||| ||||||||||||| |||  | ||||| ||    
T  31072851 agctcctttcaaggacgtacccggagaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgcacgacccagattaatc 31072950  T
Q  116 gcccacctttggt 128  Q
    | |||||||||||    
T  31072951 gtccacctttggt 31072963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 15795627 - 15795522
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  ||||||| ||||||||| |||||| |||||||||||| |||||||||||||||||||| |||   | |||||||    
T  15795627 agctccttccaaggacgtacccggggaataccgagttcgattcccagggg-aacaacgcttggtcagtgcgcatgcctctacgcacgagctgaattagtc 15795529  T
Q  116 gcccacc 122  Q
    |||||||    
T  15795528 gcccacc 15795522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 45877433 - 45877527
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 116  Q
    ||||||||| ||||||||  ||||||||||||||||  |||||| |||||| |||||||||||| |||||||||||||  ||  |||||||||||    
T  45877433 ttccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcg 45877527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 3763024 - 3763144
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| || |||||| |||||||| ||||||||| |||||||| ||| || |||||||||||| ||||| ||||| |||||||| ||||  |||||||||    
T  3763024 agctcctttcaaggacgtatccgggaaataccggattcgattcacagagg-aacaacgcttggtcagtgtgcatgtctctacgcacgaactggattagtc 3763122  T
Q  116 gcccacctttggtggatcagaa 137  Q
    | ||||| ||| | ||||||||    
T  3763123 gtccaccattgatagatcagaa 3763144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 7310811 - 7310714
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||| ||| ||||||||| |||| || ||| |||||||||||||| |||  |||||||||||| || ||||||||| || |||||    
T  7310811 aataccgggttcgattcccagtgggaacaacacttgcccggtgtgcatgcctctacgcacgagccggattagtcgctcatctttggtgggtcggaaac 7310714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 47303617 - 47303512
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| |||||||||||||| |||||| ||||| |||| |||||||| ||||| |||||| ||||||||||| |  ||  ||||||||||| | ||    
T  47303617 ttccaaggacgtatccggaaaatatcgggtttgattcccaggaggaacaacacttggtcagtgcacatgcctctacacatgagccggattagtcgtcaac 47303518  T
Q  122 ctttgg 127  Q
    ||||||    
T  47303517 ctttgg 47303512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 32873682 - 32873571
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||||||||||||| ||| |||| || |||| ||||||||||  |||| |||||||||||| ||||||| ||||||||||||   ||  | ||||||||    
T  32873682 agctcattccaaggacgtacccgggaa-taccaggttcgattcctagggagaacaacgcttgaccagtgcacatgcctctacgtatgagccagattagtc 32873584  T
Q  116 gcccacctttggt 128  Q
    |||||||||||||    
T  32873583 gcccacctttggt 32873571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 43330815 - 43330743
Alignment:
Q  67 aacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||| |||| ||||||||||||||||||||| |||  ||||||||||||||||||||||||| ||| ||||    
T  43330815 aacaacacttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcaaaaac 43330743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 7648756 - 7648823
Alignment:
Q  59 tcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 126  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| |||  |||||||||||||||||||||    
T  7648756 tcagggggaacaacgtttgaccagtgcgcatacctctacgcacgagccggattagtcgcccacctttg 7648823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 52364934 - 52364851
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| ||||||||| ||| ||||  ||||||| ||||||||| |||  ||||||||||||| |||||||||||||||||||||    
T  52364934 agctccttccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgc 52364851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 33251635 - 33251745
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||  ||  ||||||||||||||||| | | |||||||||| |||||||||| ||||||||||||||  ||  ||||||||||    
T  33251635 agctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtc 33251734  T
Q  116 gcccacctttg 126  Q
    | |||| ||||    
T  33251735 gtccacatttg 33251745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 26590368 - 26590319
Alignment:
Q  48 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 97  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  26590368 gggttcgattctcagggggaacaacgcttggtcagtgtgcatgcctctac 26590319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 47471831 - 47471927
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||| |||||| ||||| ||||||| ||||||||||| |||||||  ||  || |||||||| ||||||||||||| || |||||    
T  47471831 aataccgggttcgattcccagggg-aacaatgcttggctagtgcgcatgcttctacgcatgagccgaattagtcgtccacctttggtgggtcggaaac 47471927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 3755543 - 3755655
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| || |||||| ||||||||  |||||||  |||||||| |||| ||||||||| ||| |||||||||||| ||||||||  ||  ||||||||||    
T  3755543 agctcttttcaaggacgtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgcgcatgtctctacgcatgagccggattagtc 3755642  T
Q  116 gcccacctttggt 128  Q
    | | |||||||||    
T  3755643 gtctacctttggt 3755655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 4638160 - 4638236
Alignment:
Q  49 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 125  Q
    |||||||||| |||| | ||||||||||| ||||||||||| ||||||||| |||  ||||||||| ||||||||||    
T  4638160 ggttcgattcccaggagaaacaacgcttgaccagtgcgcatacctctacgcacgagccggattagtagcccaccttt 4638236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 23511566 - 23511650
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 126  Q
    |||| |||||||||||| || ||||| ||||| ||| |||||||||||||||||||||  || |||||||| ||| |||||||||    
T  23511566 aatatcgggttcgattcacaaggggagcaacgtttgaccagtgcgcatgcctctacgcatgagtcggattaatcgtccacctttg 23511650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 7613034 - 7612987
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcat 89  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||    
T  7613034 aataccgggttcgattcccagggggaacaacgcttggctagtgcgcat 7612987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 41219599 - 41219682
Alignment:
Q  50 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||| ||| |||   |||||| || | |||||||||||||||    
T  41219599 gttcgattctcaggaggaacaacgtttggccagtgcgtatgcctctgcgcacgagctggattaatcactcacctttggtggatc 41219682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 54237417 - 54237504
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||  || |||||| |||||||| ||||| |||| |||||| |||||| ||||||| ||||| ||||||||||| ||||||||    
T  54237417 aagaagcttctttcaaggacgtatccgggaaatatcggggtcgattttcagggagaacaacacttggtcagtgcgcatgtctctacgc 54237504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 55069765 - 55069690
Alignment:
Q  64 gggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||| ||||||||||| ||||||||||||| |||  ||||||| |||| |||||||||||| || |||||    
T  55069765 gggaacaacgtttggccagtgcacatgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaac 55069690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 26362068 - 26361978
Alignment:
Q  49 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||| ||||| || ||||||||||| |||| ||||| |||||||||||||| |||  |||||||||||| |||||||| ||| || |||||    
T  26362068 ggtttgattcccaaggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccggattagtcgcacacctttgatgggtcggaaac 26361978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 39849076 - 39849149
Alignment:
Q  47 cgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    |||||||||||| ||| || |||||||||||||||||| ||||||||||||||  ||  ||||||||||||||||    
T  39849076 cgggttcgattcccagagg-aacaacgcttggccagtgtgcatgcctctacgcatgagccggattagtcgcccac 39849149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 40660465 - 40660347
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    ||||||||| ||| || ||  ||||||| ||||||||| ||||||||  ||| ||||||||  |||| ||||||||||||||||||||  ||| ||||||    
T  40660465 aagaagctccttctaaagagttatccgggaaataccggattcgattcctaggaggaacaacatttggtcagtgcgcatgcctctacgcatgaaccggatt 40660366  T
Q  112 agtcgcccacctttggtgg 130  Q
    | ||   ||||||||||||    
T  40660365 aatcattcacctttggtgg 40660347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 45402486 - 45402361
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 111  Q
    |||||||||||||   ||||||| ||||  |||| ||||||||||||  || ||||||||| || |||| ||||||||||||||||||  ||  ||||||    
T  45402486 aagaagctcattc---ggatgtacccggggaatatcgggttcgattcctagagggaacaacactcggcctgtgcgcatgcctctacgcatgagccggatt 45402390  T
Q  112 agtcgcccacctttggtggatcagaaact 140  Q
    |||||  ||||||| |||| || ||||||    
T  45402389 agtcgttcacctttagtgggtcggaaact 45402361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 8362576 - 8362673
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||||| |||| ||| || ||||||| ||||||||| |||||||||||||||  ||  |  |||||||| |||||||| ||||||| |||||    
T  8362576 aataccgggttcaattcccagtggaaacaacgtttggccagtccgcatgcctctacgcatgagccaaattagtcgtccacctttagtggatccgaaac 8362673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 139
Target Start/End: Complemental strand, 24506751 - 24506659
Alignment:
Q  46 ccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||||| ||||||  ||||||||||| ||||||| |||||||||||||  || || |||||||||| |||| ||||||| || |||||    
T  24506751 ccgggttcgattttcaggga-aacaacgcttgaccagtgcacatgcctctacgcatgagtcagattagtcgctcaccattggtgggtcggaaac 24506659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 28242251 - 28242352
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| |||||| || ||||||||| ||||||||||| ||||  |||| ||||||| | ||||||||||| |||||||||| ||  ||  ||||||||||    
T  28242251 agctccttccaatgacgtatccggagaataccgggttagattgccaggaggaacaatgtttggccagtgcacatgcctctatgcatgaggcggattagtc 28242350  T
Q  116 gc 117  Q
    ||    
T  28242351 gc 28242352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 35998698 - 35998582
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    |||||| || ||| ||||| ||||||||||| |||| ||  ||| |||||||||||  |||||| ||||||||||||| ||| | |||||| ||| ||||    
T  35998698 ttccaaagacgtacccggagaataccgggtttgatt-tcgagggaaacaacgcttgatcagtgcacatgcctctacgcacgagttggattaatcgtccac 35998600  T
Q  122 ctttggtggatcagaaac 139  Q
    |||| |||| ||||||||    
T  35998599 ctttagtgggtcagaaac 35998582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 19146969 - 19147057
Alignment:
Q  51 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||| ||||| |||||||||||||||||||| | || |||||| || |||   |||||||||| ||||||||||||| || |||||    
T  19146969 ttcgattttcaggaggaacaacgcttggccagtgtgtatccctctatgcacgagctggattagtcgtccacctttggtgggtcggaaac 19147057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 46529978 - 46529924
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 96  Q
    ||||||||||||||||||||| || ||||| |||| ||||||| |||||||||||    
T  46529978 aataccgggttcgattctcagaggaaacaatgcttcgccagtgtgcatgcctcta 46529924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 144
Target Start/End: Original strand, 22909772 - 22909884
Alignment:
Q  31 tgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    |||||||||| |||| ||||||||||||||| | ||||||||||| ||| ||||||||| | |||||||  ||  || ||||||||  |||||||| |||    
T  22909772 tgtatccggagaatatcgggttcgattctca-gaggaacaacgctaggctagtgcgcatacttctacgcatgagccgaattagtcgtgcacctttgatgg 22909870  T
Q  131 atcagaaactagtg 144  Q
     || ||||| ||||    
T  22909871 gtcggaaaccagtg 22909884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 30735079 - 30735018
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttg 77  Q
    ||||||||||||||| | |  |||  ||||||| ||||||||||||||||||||||||||||    
T  30735079 agctcattccaaggacgcactcggggaataccgagttcgattctcagggggaacaacgcttg 30735018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 34374533 - 34374453
Alignment:
Q  59 tcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||| |||||| ||||| ||||||||||||||| ||||   | |||||||||||||||  ||||||||| || |||||    
T  34374533 tcaggggaaacaacacttggtcagtgcgcatgcctcaacgcataagtcggattagtcgcccttctttggtgggtcggaaac 34374453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 44064584 - 44064640
Alignment:
Q  83 tgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||||||||||  ||| |||||||||||| |||||||||||| || |||||    
T  44064584 tgcgcatgcctctacgcatgaaccggattagtcgctcacctttggtgggtcggaaac 44064640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 50682446 - 50682522
Alignment:
Q  12 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgca 88  Q
    ||||||||| ||| || || |||| |||||||||  ||||||||||   |||| |||||||||||||||||||||||    
T  50682446 aagaagctccttcgaatgacgtattcggaaaatatagggttcgatttctagggagaacaacgcttggccagtgcgca 50682522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 2668085 - 2668148
Alignment:
Q  67 aacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    |||||| ||||||||||||||||||||||||||  ||   ||||||||||| ||||||| ||||    
T  2668085 aacaacacttggccagtgcgcatgcctctacgcaagagctggattagtcgctcacctttagtgg 2668148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 33688932 - 33689007
Alignment:
Q  24 ccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||| ||||| ||  |||| ||||||| ||||  | |||||| ||| ||||||||||||||||||||||||||    
T  33688932 ccaaggacgtatcgggggaatatcgggttcaattcctaaggggaataacacttggccagtgcgcatgcctctacgc 33689007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 45450579 - 45450498
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||||||| | ||||||| | ||||| ||||| ||||  |||||| ||||| ||||| |||||||||||||||||||||    
T  45450579 agctcattccaag-acgtatccgtagaatactgggtttgatttccagggg-aacaatgcttgaccagtgcgcatgcctctacgc 45450498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 13167551 - 13167497
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 96  Q
    |||| |||||||||||| ||   ||||||||||||||||||||| ||||||||||    
T  13167551 aatatcgggttcgattcccaaaaggaacaacgcttggccagtgcacatgcctcta 13167497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 38394301 - 38394189
Alignment:
Q  22 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||||||| ||||| | | |||||||| ||||||||||||||| ||||||||| || ||||||| |||  |||||||  ||  |||||||||| |||||    
T  38394301 ttccaaggacgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtttctacgcatgagccggattagtcacccac 38394204  T
Q  122 ctttggtggatcaga 136  Q
    |  |||||| |||||    
T  38394203 cagtggtgggtcaga 38394189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 5549270 - 5549346
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcct 93  Q
    ||||||||||||||||||||| ||  ||||| ||||||||||  |||   |||||||||||| ||| |||||||||||    
T  5549270 agctcattccaaggatgtatcagg-gaatactgggttcgatttccagtaagaacaacgcttgaccaatgcgcatgcct 5549346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 22405661 - 22405564
Alignment:
Q  32 gtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 129  Q
    |||||||  ||||||||| ||| ||||||||| ||||||||||||  ||| |||| |||||| || || |||  ||||||| ||| ||| ||||||||    
T  22405661 gtatccgtgaaataccggattctattctcaggaggaacaacgcttaaccaatgcgaatgcctttatgcacgagccggattaatcgtccatctttggtg 22405564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 19873388 - 19873420
Alignment:
Q  65 ggaacaacgcttggccagtgcgcatgcctctac 97  Q
    ||||||| |||||||||||||||||||||||||    
T  19873388 ggaacaatgcttggccagtgcgcatgcctctac 19873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 41223140 - 41223089
Alignment:
Q  47 cgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||||||||| ||||||  ||||||| ||||||| |||||||||||||||||    
T  41223140 cgggttcgattatcaggga-aacaacgtttggccaatgcgcatgcctctacgc 41223089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 49021274 - 49021214
Alignment:
Q  79 ccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||||||||||||||||||||  ||  ||||||||||| ||||| ||||||| || |||||    
T  49021274 ccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaac 49021214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 68493 - 68604
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| |||| ||||| |||||||||||| |||||||||||||||||||   |||||||||||||||||| |||  ||||||||||    
T  68493 agctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtc 68589  T
Q  116 gcccacctttggtgg 130  Q
    |||||||||||||||    
T  68590 gcccacctttggtgg 68604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 6857 - 6954
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||  |||||||||||| |||||||||||| || |||||    
T  6857 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaac 6954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 155809 - 155730
Alignment:
Q  51 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  155809 ttcgattcccagggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgg 155730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 25884 - 25794
Alignment:
Q  49 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||  |||| ||||||||||||||||||||||||| ||||||||  ||| | |||||||| |||||||||  ||| ||||||||    
T  25884 ggttcgattcctagggagaacaacgcttggccagtgcgcatgactctacgcgtgaaccagattagtcacccacctttactgggtcagaaac 25794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 42 - 140
Target Start/End: Complemental strand, 8808 - 8710
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 140  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||  ||   |||||||||| ||||||||||||| || ||||||    
T  8808 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaact 8710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 57; Significance: 7e-24; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 271207 - 271103
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||| |||| |||||||||||| ||||||||||||||||||| ||||||||||| |||||||| |||  ||| ||||||    
T  271207 agctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacgcttggtcagtgcgcatgtctctacgcacgagccgggttagtc 271108  T
Q  116 gccca 120  Q
    |||||    
T  271107 gccca 271103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 249412 - 249337
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgc 117  Q
    |||||| |||||||||||||||| ||| |||||||| ||||||| ||| ||||||||| ||| |||||||||||||    
T  249412 aataccaggttcgattctcagggagaataacgcttgaccagtgcacatacctctacgcacgagtcggattagtcgc 249337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 219404 - 219462
Alignment:
Q  75 ttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 133  Q
    ||||||||||||||||||||||||| ||||  |||||||||| ||||||||| ||||||    
T  219404 ttggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatc 219462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 250099 - 250044
Alignment:
Q  75 ttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    ||||||||||||||||||||||||| |||  |||||||||||| | ||||||||||    
T  250099 ttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgg 250044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 12576 - 12672
Alignment:
Q  41 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||||  ||||  ||||||||||| |||||||||||||||||||||  || |||||||||||||||||||||| ||||| ||||||    
T  12576 aaataccgggttcgattcctaggg--aacaacgcttgaccagtgcgcatgcctctacgcatgagtcggattagtcgcccacctttgatggattagaaac 12672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 7961 - 7845
Alignment:
Q  23 tccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacc 122  Q
    |||||||| ||| ||||  ||||||||||| ||||| || |||||| ||| ||||||||||||||||||||||||||   |   ||||||||||||||||    
T  7961 tccaaggacgtacccggggaataccgggtttgattcccaaggggaaaaacacttggccagtgcgcatgcctctacgcattagctggattagtcgcccacc 7862  T
Q  123 tttggtggatcagaaac 139  Q
    ||||||||||| |||||    
T  7861 tttggtggatcggaaac 7845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 95063 - 94999
Alignment:
Q  67 aacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacc-tttggtgg 130  Q
    ||||||| ||| ||||||||||||||| |||||  ||  ||||||||||||||||| ||||||||    
T  95063 aacaacgtttgaccagtgcgcatgcctttacgcatgagccggattagtcgcccaccatttggtgg 94999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 41046 - 41133
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 129  Q
    |||| ||||||||||||||| |||||||||| ||||| ||||| |||||||||||||| |||  ||||||||||||||| ||||||||    
T  41046 aatatcgggttcgattctcaaggggaacaacacttggtcagtgtgcatgcctctacgcacgagccggattagtcgcccatctttggtg 41133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 319398 - 319512
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||||||||  ||||||||||| ||||   ||||||||||||||||||||||||||||| |||||| ||  ||   |||||||||    
T  319398 agctccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgcatgagctggattagtc 319497  T
Q  116 gcccacctttggtgg 130  Q
    | |||||||||||||    
T  319498 gtccacctttggtgg 319512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 546 - 669
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 115  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| ||||||||||||| ||||  ||||| |||||||||||||   ||  | ||||||||    
T  546 agctccttccaaggacgtacccggggaataccgggttcgattcgcagggggaacaacacttgatcagtgtgcatgcctctacgtatgagccagattagtc 645  T
Q  116 gcccacctttggtggatcagaaac 139  Q
    || |||||||||||| || |||||    
T  646 gctcacctttggtgggtcggaaac 669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 412159 - 412091
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtg 84  Q
    ||||| ||||||||| ||||||||  ||||||| ||||||||| ||||||||||||||||||| |||||    
T  412159 agctccttccaaggacgtatccggggaataccgagttcgattcacagggggaacaacgcttggtcagtg 412091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 139437 - 139491
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 96  Q
    |||| |||||||||||| ||   ||||||||||||||||||||| ||||||||||    
T  139437 aatatcgggttcgattcccaaaaggaacaacgcttggccagtgcacatgcctcta 139491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 18608 - 18691
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    ||||| ||||||||||||| ||| | || ||||||||||||||  ||||||||||||||||||||||||| |||| ||||||||    
T  18608 agctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctctacgc 18691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 26185 - 26264
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 121  Q
    ||||| ||||||||||  ||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||| ||||    
T  26185 aatactgggttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacgcacgagccggattagtcgtccac 26264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 8151 - 8231
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 97  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| || ||| |||||||||||||||||||||||||||||||    
T  8151 agctccttccaaggacgtacccggggaataccgggttcgattcccaaggg-aacaacgcttggccagtgcgcatgcctctac 8231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 42939 - 42842
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    |||| ||||||||||||  |||| |||||| |||||| |||||||||||||||||| |  ||  ||||||||||||||||||||||||| || |||||    
T  42939 aatatcgggttcgattcctagggagaacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaac 42842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 9438 - 9479
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagt 83  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  9438 aataccgggttcgattcccagggggaacaacgcttggccagt 9479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 1721 - 1633
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    |||||| |||||||||  |||||||||||||| || ||||||||||||||||||||||  ||  |  ||||||||||||||||||||||    
T  1721 aataccaggttcgatttccagggggaacaacgattagccagtgcgcatgcctctacgcatgagccaaattagtcgcccacctttggtgg 1633  T

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Target: scaffold0024 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 149396 - 149484
Alignment:
Q  51 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||  |||    |||||||||||||||  |||||| ||||||||    
T  149396 ttcgattctcagggggaacaacgcttgaccagtgtgcatgcctctacgtacgaggtagattagtcgcccaccaatggtgggtcagaaac 149484  T

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Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 16887 - 16969
Alignment:
Q  48 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 130  Q
    |||||| ||||||||||| |||||||||||| ||||||| ||| |||||||| |||  | |||||||||| ||||||||||||    
T  16887 gggttcaattctcaggggaaacaacgcttggtcagtgcgtatgtctctacgcacgagccagattagtcgctcacctttggtgg 16969  T

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Target: scaffold0013 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 51735 - 51826
Alignment:
Q  44 taccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||| ||    || |||  ||||| ||||||||||||||| |||||| |||||    
T  51735 taccgggttcgattcccagagggaacaacgcttggccagtgcgcatgtct----gcacgagccggatcagtcgcccacctttgatggatctgaaac 51826  T

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Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 72609 - 72686
Alignment:
Q  16 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctc 94  Q
    ||||| ||||||||| ||||| || || ||||||||||||||  || ||||||||||||||| ||||||||||||||||    
T  72609 agctccttccaaggacgtatcagggaa-taccgggttcgatttccaaggggaacaacgcttgaccagtgcgcatgcctc 72686  T

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Target: scaffold0384 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 5975 - 6071
Alignment:
Q  42 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||| ||||||||||  |||||||| ||||||||||||||||| |||||||||||||  ||  || |||||||| ||||| ||||||| || |||||    
T  5975 aatactgggttcgatttccaggggga-caacgcttggccagtgcacatgcctctacgcatgagacgaattagtcgtccaccattggtgggtcggaaac 6071  T

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Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 139
Target Start/End: Original strand, 224303 - 224416
Alignment:
Q  26 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 125  Q
    ||||| |||| |||| |||| ||||||||| |||||||| ||| |||| |||  |||||| ||| ||||||||| |||  ||||||||||| ||| ||||    
T  224303 aaggacgtattcggagaatatcgggttcgaatctcagggagaataacgtttgatcagtgcacatacctctacgcacgagccggattagtcgtccatcttt 224402  T
Q  126 ggtggatcagaaac 139  Q
    ||||| || |||||    
T  224403 ggtgggtcggaaac 224416  T

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Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 186504 - 186593
Alignment:
Q  26 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 116  Q
    ||||||||||  ||| |||| ||||||||||| |||||| ||| || | |||| |||||| ||||||||||||| |||  |||||||||||    
T  186504 aaggatgtatttggagaatatcgggttcgatt-tcagggagaataatgtttggtcagtgcacatgcctctacgcacgagccggattagtcg 186593  T

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Target: scaffold0116 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 17401 - 17489
Alignment:
Q  51 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||||||| || || ||||| ||||||||||||| ||||| | |||  ||||||||||||||||| ||| ||| || |||||    
T  17401 ttcgattctcaggggaaaaaatgcttgaccagtgcgcatgcttctacacacgagccggattagtcgcccaccattgatgggtcggaaac 17489  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 25108 - 25184
Alignment:
Q  63 ggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 139  Q
    ||||||||||  |||| |||||||||||  |||||||  ||||| ||||| ||| |||||||||||||||| |||||    
T  25108 ggggaacaacatttggacagtgcgcatgtttctacgcatgaatcagattaatcgtccacctttggtggatcggaaac 25184  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 65238 - 65202
Alignment:
Q  63 ggggaacaacgcttggccagtgcgcatgcctctacgc 99  Q
    |||||||||||||||||||||||||||| ||||||||    
T  65238 ggggaacaacgcttggccagtgcgcatgtctctacgc 65202  T

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Target: scaffold0635 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 2207 - 2114
Alignment:
Q  32 gtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 125  Q
    |||||||  ||||||||| ||||||||||||  |||||||||||||   || |||||||| |||| ||   | |||||||||||| ||||||||    
T  2207 gtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttctatgcataagtcggattagtcgtccaccttt 2114  T

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