View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11276_low_24 (Length: 238)
Name: NF11276_low_24
Description: NF11276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11276_low_24 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 29066158 - 29065937
Alignment:
| Q |
1 |
cgattcttctgctatgctttcttttgcagaaacactttcatcagagagaatcccgagtttctagcgataagataaagtggaggaacatattaatcacgca |
100 |
Q |
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| T |
29066158 |
cgattcttctgctatgctttcttttgcagaaacactttcatcagagagaatctcgagtttctagcgataagataaagtggaggaacatattaatcatgca |
29066059 |
T |
|
| Q |
101 |
taactttctcaagatatcattgtcaataagatgaaatggattaggaagttagttaccagaagaggtttctcatcaggagctgaatcagcatctagcctag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29066058 |
taactttctcaagatatcattgtcaataagatgaaatggattaggaagttagttaccagaagaggtttctcatcaggagctgaatcagcatctagcctag |
29065959 |
T |
|
| Q |
201 |
cttcttcctctgacggtgtttt |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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|
| T |
29065958 |
cttcttcctctgacggtgtttt |
29065937 |
T |
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