View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11278_high_102 (Length: 290)

Name: NF11278_high_102
Description: NF11278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11278_high_102
NF11278_high_102
[»] chr8 (27 HSPs)
chr8 (1-275)||(33511173-33511447)
chr8 (105-269)||(36143286-36143450)
chr8 (141-269)||(29700233-29700361)
chr8 (113-268)||(2518590-2518748)
chr8 (96-262)||(45512699-45512870)
chr8 (133-253)||(10824377-10824497)
chr8 (130-253)||(18474173-18474296)
chr8 (113-181)||(29520585-29520653)
chr8 (99-250)||(13171865-13172020)
chr8 (152-275)||(44373740-44373867)
chr8 (113-260)||(45419164-45419313)
chr8 (110-240)||(16252857-16252989)
chr8 (105-164)||(43732484-43732543)
chr8 (96-162)||(25288810-25288876)
chr8 (96-162)||(25300145-25300211)
chr8 (120-255)||(32043522-32043661)
chr8 (113-181)||(15215560-15215628)
chr8 (105-181)||(30456501-30456576)
chr8 (113-262)||(41971982-41972131)
chr8 (113-168)||(28300414-28300469)
chr8 (113-168)||(37077690-37077745)
chr8 (130-181)||(44681328-44681379)
chr8 (115-189)||(25439394-25439468)
chr8 (132-181)||(16705706-16705755)
chr8 (113-181)||(10080194-10080262)
chr8 (217-269)||(17491818-17491870)
chr8 (105-181)||(36395239-36395315)
[»] chr6 (13 HSPs)
chr6 (99-255)||(33083969-33084129)
chr6 (87-234)||(31818437-31818582)
chr6 (132-235)||(8364520-8364623)
chr6 (99-181)||(33998293-33998375)
chr6 (99-181)||(12134190-12134272)
chr6 (136-269)||(2079288-2079425)
chr6 (113-181)||(5129126-5129194)
chr6 (113-261)||(608084-608234)
chr6 (115-235)||(6641640-6641764)
chr6 (118-168)||(7513285-7513335)
chr6 (111-183)||(546922-546994)
chr6 (138-190)||(4796889-4796941)
chr6 (113-181)||(9594001-9594069)
[»] chr7 (29 HSPs)
chr7 (105-269)||(30200160-30200324)
chr7 (105-249)||(36514424-36514570)
chr7 (87-252)||(39811856-39812025)
chr7 (110-271)||(48736094-48736259)
chr7 (96-262)||(25579281-25579445)
chr7 (113-262)||(19262637-19262788)
chr7 (113-253)||(47848599-47848743)
chr7 (105-271)||(5335839-5336007)
chr7 (105-254)||(37617861-37618015)
chr7 (134-181)||(25826759-25826806)
chr7 (152-236)||(27893778-27893864)
chr7 (96-186)||(28542168-28542257)
chr7 (87-254)||(33072853-33073022)
chr7 (132-178)||(47796430-47796476)
chr7 (176-261)||(36136756-36136841)
chr7 (176-269)||(42187462-42187555)
chr7 (105-181)||(1740714-1740790)
chr7 (176-252)||(27021906-27021982)
chr7 (130-267)||(36101964-36102105)
chr7 (113-254)||(43281601-43281744)
chr7 (130-181)||(35713621-35713672)
chr7 (110-168)||(23404340-23404398)
chr7 (105-146)||(14593678-14593719)
chr7 (105-146)||(16013201-16013242)
chr7 (222-271)||(18605341-18605390)
chr7 (222-271)||(18637600-18637649)
chr7 (222-271)||(18651034-18651083)
chr7 (105-181)||(35906490-35906566)
chr7 (113-181)||(45836769-45836837)
[»] chr3 (26 HSPs)
chr3 (96-235)||(42510245-42510385)
chr3 (99-261)||(54128289-54128455)
chr3 (96-269)||(2340911-2341088)
chr3 (133-181)||(22902751-22902799)
chr3 (120-269)||(36820158-36820309)
chr3 (154-249)||(54365194-54365290)
chr3 (131-268)||(39600879-39601020)
chr3 (84-261)||(52138696-52138877)
chr3 (105-168)||(45728063-45728126)
chr3 (99-181)||(345000-345082)
chr3 (87-181)||(23534858-23534952)
chr3 (130-235)||(44134061-44134164)
chr3 (177-255)||(50960844-50960922)
chr3 (176-253)||(3987039-3987116)
chr3 (103-269)||(46140349-46140517)
chr3 (105-254)||(25191296-25191447)
chr3 (96-232)||(50249289-50249432)
chr3 (89-181)||(50621649-50621741)
chr3 (130-176)||(48777509-48777555)
chr3 (224-269)||(30572995-30573040)
chr3 (176-269)||(34719269-34719362)
chr3 (153-193)||(2198836-2198876)
chr3 (113-181)||(38054626-38054694)
chr3 (105-181)||(46568033-46568109)
chr3 (105-181)||(51447998-51448074)
chr3 (131-231)||(55244245-55244345)
[»] chr5 (34 HSPs)
chr5 (101-235)||(11002654-11002790)
chr5 (130-269)||(9235011-9235149)
chr5 (116-269)||(37124497-37124652)
chr5 (130-181)||(683981-684032)
chr5 (130-266)||(6888935-6889075)
chr5 (99-275)||(10082930-10083109)
chr5 (143-255)||(41833793-41833907)
chr5 (158-265)||(33667188-33667297)
chr5 (116-269)||(30588381-30588534)
chr5 (130-235)||(14667699-14667814)
chr5 (113-180)||(21093701-21093768)
chr5 (151-266)||(28676562-28676677)
chr5 (99-252)||(1275176-1275332)
chr5 (148-255)||(14749267-14749378)
chr5 (99-168)||(16134481-16134550)
chr5 (105-181)||(2075763-2075839)
chr5 (112-168)||(6368227-6368283)
chr5 (94-146)||(27998329-27998381)
chr5 (113-234)||(32516483-32516606)
chr5 (178-237)||(27887-27946)
chr5 (113-168)||(21952276-21952331)
chr5 (134-254)||(31636132-31636254)
chr5 (113-179)||(7678405-7678471)
chr5 (176-269)||(79505-79598)
chr5 (96-181)||(5305524-5305609)
chr5 (96-181)||(28186957-28187042)
chr5 (201-262)||(29938132-29938193)
chr5 (131-168)||(38341723-38341760)
chr5 (96-181)||(41110030-41110115)
chr5 (105-181)||(1287878-1287954)
chr5 (136-269)||(7359457-7359593)
chr5 (105-161)||(24178427-24178483)
chr5 (116-197)||(34194767-34194850)
chr5 (201-269)||(42199303-42199371)
[»] chr1 (36 HSPs)
chr1 (96-262)||(1661334-1661508)
chr1 (99-271)||(39422238-39422412)
chr1 (118-245)||(35672618-35672745)
chr1 (176-269)||(43423711-43423804)
chr1 (187-267)||(52837528-52837608)
chr1 (133-269)||(35828747-35828887)
chr1 (176-262)||(2544591-2544677)
chr1 (115-189)||(4590805-4590879)
chr1 (99-254)||(9509229-9509388)
chr1 (113-206)||(12135655-12135747)
chr1 (136-254)||(39140468-39140590)
chr1 (105-181)||(34792638-34792714)
chr1 (110-177)||(16822312-16822379)
chr1 (105-236)||(6641049-6641181)
chr1 (99-181)||(52442793-52442875)
chr1 (100-181)||(4379917-4379998)
chr1 (99-233)||(9599627-9599765)
chr1 (99-269)||(14226026-14226198)
chr1 (185-262)||(32404730-32404807)
chr1 (105-254)||(1210662-1210815)
chr1 (105-181)||(40419556-40419632)
chr1 (113-181)||(40920826-40920894)
chr1 (183-275)||(48431597-48431689)
chr1 (99-146)||(26016348-26016395)
chr1 (176-255)||(26016429-26016508)
chr1 (113-253)||(32231167-32231311)
chr1 (105-252)||(8671837-8671986)
chr1 (176-254)||(43240591-43240669)
chr1 (119-168)||(16273122-16273171)
chr1 (87-168)||(19936421-19936502)
chr1 (113-181)||(696194-696262)
chr1 (113-181)||(4001744-4001812)
chr1 (105-181)||(9592651-9592727)
chr1 (113-181)||(15085859-15085927)
chr1 (105-181)||(30202419-30202495)
chr1 (105-254)||(51440977-51441130)
[»] chr4 (38 HSPs)
chr4 (99-268)||(17900391-17900564)
chr4 (113-269)||(54470132-54470292)
chr4 (97-262)||(50662298-50662466)
chr4 (130-255)||(10208980-10209105)
chr4 (130-197)||(20998954-20999025)
chr4 (130-253)||(51252674-51252799)
chr4 (87-269)||(29398718-29398903)
chr4 (176-269)||(41192828-41192921)
chr4 (113-177)||(2588906-2588970)
chr4 (105-254)||(33191060-33191213)
chr4 (113-180)||(20105761-20105828)
chr4 (176-271)||(35555842-35555937)
chr4 (138-269)||(3254082-3254216)
chr4 (105-167)||(44860771-44860833)
chr4 (223-268)||(13805463-13805508)
chr4 (96-181)||(27991704-27991789)
chr4 (176-269)||(31339529-31339621)
chr4 (113-178)||(40933188-40933253)
chr4 (97-235)||(49987337-49987479)
chr4 (105-254)||(31960026-31960179)
chr4 (113-197)||(45423544-45423628)
chr4 (105-252)||(30807511-30807658)
chr4 (130-181)||(45185306-45185357)
chr4 (113-252)||(39100749-39100890)
chr4 (201-255)||(47611744-47611798)
chr4 (99-156)||(18499784-18499841)
chr4 (176-269)||(28497482-28497574)
chr4 (105-146)||(33227126-33227167)
chr4 (105-181)||(12494667-12494743)
chr4 (105-181)||(23906590-23906666)
chr4 (219-255)||(25257792-25257828)
chr4 (105-189)||(43070045-43070129)
chr4 (105-181)||(43433835-43433911)
chr4 (105-254)||(48622755-48622906)
chr4 (97-234)||(50680648-50680789)
chr4 (215-255)||(53518531-53518571)
chr4 (215-251)||(56225097-56225133)
chr4 (105-181)||(56375207-56375283)
[»] scaffold0018 (1 HSPs)
scaffold0018 (96-262)||(44072-44245)
[»] chr2 (24 HSPs)
chr2 (118-255)||(9578914-9579053)
chr2 (105-187)||(9647888-9647970)
chr2 (96-167)||(45077656-45077727)
chr2 (99-262)||(7825269-7825438)
chr2 (114-253)||(9556582-9556724)
chr2 (140-271)||(11017268-11017401)
chr2 (113-235)||(12734626-12734750)
chr2 (113-261)||(40759024-40759177)
chr2 (113-261)||(41763247-41763398)
chr2 (113-250)||(41330062-41330195)
chr2 (122-234)||(44411650-44411762)
chr2 (134-181)||(37393455-37393502)
chr2 (176-269)||(11412713-11412806)
chr2 (176-269)||(43752144-43752237)
chr2 (113-168)||(16097292-16097347)
chr2 (100-146)||(4598888-4598934)
chr2 (201-259)||(41779515-41779573)
chr2 (99-269)||(23714458-23714629)
chr2 (99-269)||(24102130-24102301)
chr2 (105-254)||(3243865-3244016)
chr2 (130-166)||(21834495-21834531)
chr2 (105-181)||(36183368-36183444)
chr2 (113-253)||(38434876-38435021)
chr2 (105-181)||(42092436-42092512)


Alignment Details
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 33511173 - 33511447
Alignment:
Q  1 ttttgaagttgggatgaatgatggggtggtttgcttttgtatttgccttatggtttatttgtgattaatttttgtccttgcttaagatgaggatgaaata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33511173 ttttgaagttgggatgaatgatggggtggtttgcttttgtatttgccttatggtttctttgtgattaatttttgtccttgcttaagatgaggatgaaata 33511272  T
Q  101 agcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  33511273 agcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagatatgattagaaatgaaaatattagagagttggggtaacacctatggt 33511372  T
Q  201 agaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagttaagag 275  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  33511373 agaaaaaatgatgaaaaatagacttaggtggtttgagtatacagagagaagacctatagattctgtagttaagag 33511447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 269
Target Start/End: Original strand, 36143286 - 36143450
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaa 204  Q
    ||||||| |||||||||||| | | |  |||||||||||||| |||||||||||||||||| ||||| |||||||||| | |||| ||||||| ||||||    
T  36143286 tagcagagatgaggatgttgtgttggtcgtgtggtaagactagatgagataggattagaaaggaaaagattagagagtcgaggtagcacctatagcagaa 36143385  T
Q  205 aaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
     | ||| || ||||||||||||||||||||| | || |||||| ||||||| |||||| ||||||    
T  36143386 tagatggtggaaaatagacttaggtggtttgggcatttagagaaaagacctatagattctgtagt 36143450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 141 - 269
Target Start/End: Original strand, 29700233 - 29700361
Alignment:
Q  141 agactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtat 240  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||| | |||||| |||  | ||| | | ||||||||||||| | ||    
T  29700233 agactagatgagataggattagaaatgaaaatgttagagagttggggtagcacctatagtagaaaagatggaggaaagttggcttaggtggtttgggcat 29700332  T
Q  241 atagagagaagacctttagattatgtagt 269  Q
    ||||||| |||||| || |||| ||||||    
T  29700333 atagagaaaagaccattggattctgtagt 29700361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 113 - 268
Target Start/End: Complemental strand, 2518748 - 2518590
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag----ttggggtaacacctatggcagaaaaaa 208  Q
    ||||| |||||||  | ||||||||||||||||| ||||||||||||||||||||| || |||||||||    |||||||| |||||   | |||||| |    
T  2518748 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcacctcaagtagaaaaga 2518650  T
Q  209 tgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtag 268  Q
    || || |||||||  ||||||||||||| ||| |||||||||||| | |||||| |||||    
T  2518649 tggtggaaaataggtttaggtggtttgattatgtagagagaagacttgtagattttgtag 2518590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 262
Target Start/End: Complemental strand, 45512870 - 45512699
Alignment:
Q  96 aaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt------agagagttggggta 189  Q
    ||||||||||||| || ||||| ||||| || | ||||||||||||||||| || || |||| |||||||||||||||||      || |||||||||||    
T  45512870 aaataagcatagcggagatgagaatgtttcgttggatgtgtggtaagactagat-aggtagggttagaaatgaaaatattaaagagagggagttggggta 45512772  T
Q  190 acacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagatt 262  Q
     ||||||| | |||||| |||||| ||||||  ||||| ||||||| | ||||| |||||||| || ||||||    
T  45512771 gcacctatagtagaaaagatgatggaaaataagcttagatggtttgggcatataaagagaagatctctagatt 45512699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 133 - 253
Target Start/End: Complemental strand, 10824497 - 10824377
Alignment:
Q  133 gtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggt 232  Q
    |||||||||||||| ||| |||| |||||||||| ||||||||||||||||| || | ||||||  | |||||| ||| |  ||||||| ||||||||||    
T  10824497 gtgtggtaagactagatgggatatgattagaaataaaaatattagagagttgaggcagcacctaaagtagaaaagatggtcgaaaataggcttaggtggt 10824398  T
Q  233 ttgagtatatagagagaagac 253  Q
    ||| |||| |||||| |||||    
T  10824397 ttgggtatttagagaaaagac 10824377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 18474296 - 18474173
Alignment:
Q  130 gatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggt 229  Q
    ||||||||||||| ||| ||| ||||| | ||||||||| |||||||||||||| | ||| ||||||| | |||||  ||| || ||| ||| ||||| |    
T  18474296 gatgtgtggtaaggctagatgtgatagaaatagaaatgacaatattagagagttagagtagcacctatagtagaaatgatggtggaaactaggcttagtt 18474197  T
Q  230 ggtttgagtatatagagagaagac 253  Q
    |||||||| || ||||||||||||    
T  18474196 ggtttgagcatgtagagagaagac 18474173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 29520585 - 29520653
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||||||||||||| | ||||||||||||||||| ||| ||||||||||||||||| |  |||||||||    
T  29520585 atgaggatgttgcgttggatgtgtggtaagactagatgggataggattagaaatgataccattagagag 29520653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 250
Target Start/End: Complemental strand, 13172020 - 13171865
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacc 194  Q
    |||||| | |||| ||||| |||||||  | ||||||| ||||||||| | | ||||||||||||||||| || |||    |||||||||||| | ||||    
T  13172020 taagcacatcagagatgagaatgttgcattggatgtgtagtaagactagacgggataggattagaaatgacaagattagagagagagttggggaagcacc 13171921  T
Q  195 tatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaa 250  Q
    ||| | |||||| ||| || ||||||  ||||||||||||| | ||||| ||||||    
T  13171920 tatagtagaaaagatggtggaaaatatgcttaggtggtttgggcatataaagagaa 13171865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 275
Target Start/End: Original strand, 44373740 - 44373867
Alignment:
Q  152 gataggattagaaatgaaaatatta----gagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagaga 247  Q
    |||||||||||||||||||||||||    ||||||||| ||| ||||||  | |||||| ||| || ||||||| |||  |||||||||| || |||||     
T  44373740 gataggattagaaatgaaaatattagagtgagagttggagtagcacctaaagtagaaaagatggtggaaaataggcttgagtggtttgagcatgtagagt 44373839  T
Q  248 gaagacctttagattatgtagttaagag 275  Q
     ||||||| |||||| |||||| |||||    
T  44373840 aaagacctatagattttgtagtaaagag 44373867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 260
Target Start/End: Original strand, 45419164 - 45419313
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag--ttggggtaacacctatggcagaaaaaatg 210  Q
    |||| ||||||||| | |||  |||||||||||| | | |||| |||||| ||||| |  |||||||||  |||||||| ||||||| | |||||| |||    
T  45419164 atgaagatgttgcgttggattagtggtaagactagaagggataagattaggaatgacaccattagagagaattggggtagcacctatagtagaaaagatg 45419263  T
Q  211 atgaaaaatagacttaggtggtttgagtatatagagagaagacctttaga 260  Q
     |  ||||||||||||||||||||| | || |||||| ||||||| ||||    
T  45419264 gtataaaatagacttaggtggtttgggcatgtagagataagacctgtaga 45419313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 240
Target Start/End: Original strand, 16252857 - 16252989
Alignment:
Q  110 gaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt--agagagttggggtaacacctatggcagaaaaa 207  Q
    ||||||||||||||| | | |||||||||||||| || ||||||||  ||||||||||| || |||  ||||||||| |||  | ||||||| ||||||     
T  16252857 gaaatgaggatgttgtgttggatgtgtggtaagattagatgagataaaattagaaatgacaacattagagagagttgaggttgctcctatggaagaaaag 16252956  T
Q  208 atgatgaaaaatagacttaggtggtttgagtat 240  Q
    |||||  ||| ||||||  | ||||||||||||    
T  16252957 atgatagaaactagactaggatggtttgagtat 16252989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 43732484 - 43732543
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaa 164  Q
    ||||||||||||||||||| || | ||||||||||||||||| ||| ||||| |||||||    
T  43732484 tagcagaaatgaggatgttacgttggatgtgtggtaagactagatgtgatagaattagaa 43732543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 25288810 - 25288876
Alignment:
Q  96 aaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattag 162  Q
    |||||||  ||||||| |||||||||||| ||| |||  |||||||||||| |||||||||||||||    
T  25288810 aaataagtgtagcagatatgaggatgttgagctggattagtggtaagactagatgagataggattag 25288876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 25300145 - 25300211
Alignment:
Q  96 aaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattag 162  Q
    |||||||  ||||||| |||||||||||| ||| |||  |||||||||||| |||||||||||||||    
T  25300145 aaataagtgtagcagatatgaggatgttgagctggattagtggtaagactagatgagataggattag 25300211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 255
Target Start/End: Original strand, 32043522 - 32043661
Alignment:
Q  120 tgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacctatggcagaaaaaatgatgaa 215  Q
    ||||||| | ||||||||||||||||| | | ||||| ||||||||||| || |||    |||||||||||||| ||||||| | | |||| ||| |  |    
T  32043522 tgttgcgttggatgtgtggtaagactagacgggatagaattagaaatgacaacattagagagagagttggggtatcacctatagtacaaaagatggtaga 32043621  T
Q  216 aaatagacttaggtggtttgagtatatagagagaagacct 255  Q
    || ||||||| |||||||||   || ||||||||||||||    
T  32043622 aactagactttggtggtttggccatgtagagagaagacct 32043661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 15215628 - 15215560
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||||||||||| ||| |||| ||||||||||||||   ||||||||||||||||| |  |||||||||    
T  15215628 atgaggatgttgtgctggatgagtggtaagactatacaggataggattagaaatgacaccattagagag 15215560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 30456576 - 30456501
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||||| | ||||||||||||||| | ||| ||||| |||||||||||  | |||||||||    
T  30456576 tagcagagatgaggatgttgcgttggatgtgtggtaagacca-atgggatagaattagaaatgacgacattagagag 30456501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 262
Target Start/End: Complemental strand, 41972131 - 41971982
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattag--agagttggggtaacacctatggcagaaaaaatg 210  Q
    ||||||||||||   | |||||||| ||||| || ||||||||| ||||||||||| ||||||||  |||||| ||||||||||||  | |||||| |||    
T  41972131 atgaggatgttgtattggatgtgtgataagatta-atgagatagaattagaaatgagaatattagagagagttagggtaacaccta-agtagaaaagatg 41972034  T
Q  211 atgaaaaatagacttaggtggtttgagtatatagagagaagacctttagatt 262  Q
     || ||||||   ||||||||||||   || |||||||||||| | ||||||    
T  41972033 gtggaaaataagtttaggtggtttggacatgtagagagaagacgtgtagatt 41971982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 28300469 - 28300414
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatga 168  Q
    |||||||||||| | | ||||||| ||||||||| |||||||| ||||||||||||    
T  28300469 atgaggatgttgtgttggatgtgtagtaagactagatgagataagattagaaatga 28300414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 37077690 - 37077745
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatga 168  Q
    |||||||||||||||| |||| ||||||| |||| | ||||||||||||| |||||    
T  37077690 atgaggatgttgcgctggatgagtggtaaaactagacgagataggattaggaatga 37077745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 44681379 - 44681328
Alignment:
Q  130 gatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||||||||||||| | |||||| |||||||||||| || |||||||||    
T  44681379 gatgtgtggtaagactagacgagataagattagaaatgacaacattagagag 44681328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 25439394 - 25439468
Alignment:
Q  115 gaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggta 189  Q
    |||||||||||||| |||  |||||||||||| ||||||||||| ||| || || |  |||||||||| ||||||    
T  25439394 gaggatgttgcgctggattagtggtaagactagatgagataggaataggaacgataccattagagagtgggggta 25439468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 16705706 - 16705755
Alignment:
Q  132 tgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||||||||||| ||| ||||| ||||||||||| || |||||||||    
T  16705706 tgtgtggtaagactagatgggatagaattagaaatgacaacattagagag 16705755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 10080262 - 10080194
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||| ||||||||| | | ||| ||||||||||| | |||||| |||||||||||| || |||||||||    
T  10080262 atgatgatgttgcgttgggtgtttggtaagactagacgagataagattagaaatgacaacattagagag 10080194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 17491870 - 17491818
Alignment:
Q  217 aatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    |||| |||||||||||||| |||| |||||||||||||| || ||| ||||||    
T  17491870 aataaacttaggtggtttgggtatgtagagagaagacctatacattttgtagt 17491818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 36395315 - 36395239
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||||| | |||| |||||||||||| |   ||||||||||| ||||| |  |||||||||    
T  36395315 tagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagag 36395239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 99 - 255
Target Start/End: Original strand, 33083969 - 33084129
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacc 194  Q
    ||||| ||||||||||||||||| |||| | ||||||||||||||||| ||| ||||| |||||||||||  |||||    |||||||||||||| ||||    
T  33083969 taagcgtagcagaaatgaggatgctgcgttggatgtgtggtaagactagatgggatagaattagaaatgacgatattagagagagagttggggtagcacc 33084068  T
Q  195 tatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacct 255  Q
    ||||| |||||| ||| |  ||| ||||||||||||||||| | || ||||||||||||||    
T  33084069 tatggtagaaaagatggtagaaactagacttaggtggtttgggaatgtagagagaagacct 33084129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 87 - 234
Target Start/End: Original strand, 31818437 - 31818582
Alignment:
Q  87 atgaggatgaaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggg 186  Q
    ||||| || |||||||  ||||||| ||||| |||||||  | ||| |||| ||||| || |||||||| |||||||||||||| ||||  ||||| |||    
T  31818437 atgagaataaaataagtgtagcagagatgagaatgttgcattggatatgtgttaagattagatgagataagattagaaatgaaattatt--agagtcggg 31818534  T
Q  187 gtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggttt 234  Q
    ||| ||||||| | | |||||||| || ||||||||||||||||||||    
T  31818535 gtagcacctatagtacaaaaaatggtggaaaatagacttaggtggttt 31818582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 8364520 - 8364623
Alignment:
Q  132 tgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtgg 231  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||| |||||| ||| || |||| | ||||||  || |  ||||||| |||||||||    
T  8364520 tgtgtggtaagactagatgggataggattagaaatgacaatattagacagttggagtagcaactatagtagaaaaggtggttgaaaataggcttaggtgg 8364619  T
Q  232 tttg 235  Q
    ||||    
T  8364620 tttg 8364623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 33998375 - 33998293
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||| ||||||| |||| ||||||||| | ||||||||||||||||| ||| |||||||||||||||||  | |||||||||    
T  33998375 taagcgtagcagagatgaagatgttgcgttggatgtgtggtaagactagatgtgataggattagaaatgactacattagagag 33998293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 12134272 - 12134190
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||||||||| ||||| |||||| | | ||||||||| ||||| | |||| |||| ||||||||||| ||||||||||||    
T  12134272 taagcatagcagagatgagaatgttgtgttggatgtgtggcaagacaagatgatatagaattagaaatgacaatattagagag 12134190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 269
Target Start/End: Original strand, 2079288 - 2079425
Alignment:
Q  136 tggtaagactatatgagataggat-tagaaatgaaaatattagagagt---tggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtgg 231  Q
    ||||||||||| |||||||| ||| ||||||||| ||||||||||||    | ||||| || |||| | |||||| ||| || ||||||| |||| ||||    
T  2079288 tggtaagactaaatgagatatgatatagaaatgacaatattagagagggagttgggtagcatctatagtagaaaagatggtggaaaataggcttaagtgg 2079387  T
Q  232 tttgagtatatagagagaagacctttagattatgtagt 269  Q
    |||  |||| |||||||||||  | |||||||||||||    
T  2079388 tttaggtatgtagagagaagatttgtagattatgtagt 2079425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 5129194 - 5129126
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||||||||||||| |  ||||||||||||| |  ||| ||| ||||||||||||| ||||||||||||    
T  5129194 atgaggatgttgcgttgaatgtgtggtaagattcgatgtgatcggattagaaatgacaatattagagag 5129126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 261
Target Start/End: Original strand, 608084 - 608234
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt--agagagttggggtaacacctatggcagaaaaaatg 210  Q
    ||||||||||| || | |||| |||||||||||| ||  ||||||||||| ||||| |  |||  |||||||  ||||| ||||||| | ||||||  ||    
T  608084 atgaggatgttccgttggatgagtggtaagactagataggataggattaggaatgacaccattagagagagtgagggtatcacctatagtagaaaagttg 608183  T
Q  211 atgaaaaatagacttaggtggtttgagtatatagagagaagacctttagat 261  Q
    ||  ||||||| ||||| |||||||   || |||||||||||||| |||||    
T  608184 atagaaaataggcttagatggtttggacatgtagagagaagacctgtagat 608234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 6641764 - 6641640
Alignment:
Q  115 gaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattag----agagttggggtaacacctatggcagaaaaaatg 210  Q
    |||||||||||| | ||||| | ||||||||| ||| |||| |||| ||||||| ||||||||    |||||||||||| ||||||| | |||||| |||    
T  6641764 gaggatgttgcgttcgatgttttgtaagactagatgggataagattggaaatgacaatattagagatagagttggggtatcacctatagtagaaaagatg 6641665  T
Q  211 atgaaaaatagacttaggtggtttg 235  Q
     |  ||| ||||||| ||| |||||    
T  6641664 gtagaaactagacttgggttgtttg 6641640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 7513335 - 7513285
Alignment:
Q  118 gatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatga 168  Q
    ||||||||| | ||||||||||||||||| |||||||| |||| |||||||    
T  7513335 gatgttgcgttggatgtgtggtaagactagatgagataagatttgaaatga 7513285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 546922 - 546994
Alignment:
Q  111 aaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagtt 183  Q
    |||| ||||||||||| | |||||||| ||| |||| || ||||| ||||| ||||||  |||||||||||||    
T  546922 aaataaggatgttgcgttggatgtgtgataaaactagataagatatgattaaaaatgaccatattagagagtt 546994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 4796889 - 4796941
Alignment:
Q  138 gtaagactatatgagataggattagaaatgaaaatattagagagttggggtaa 190  Q
    |||| |||| || |||||||||||||| ||| ||||||||||||||| |||||    
T  4796889 gtaaaactagataagataggattagaattgacaatattagagagttgtggtaa 4796941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 9594069 - 9594001
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||||||||||||| | |||| |||||||||||| | | ||||||||||| ||||| |  |||||||||    
T  9594069 atgaggatgttgcgttggatgagtggtaagactagacgggataggattaggaatgacaccattagagag 9594001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 8e-24; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 105 - 269
Target Start/End: Complemental strand, 30200324 - 30200160
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaa 204  Q
    ||||||| |||||||||||| | | |||||||||||||| || ||| |||| |||||||||||| || ||||||||||| ||||||||||||| | ||||    
T  30200324 tagcagagatgaggatgttgtgttggatgtgtggtaagattagatgggatatgattagaaatgacaacattagagagttagggtaacacctatagtagaa 30200225  T
Q  205 aaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    || ||| || ||| ||| |||||||| |||  | || || | |||||||||  ||||||||||||    
T  30200224 aagatggtggaaactaggcttaggtgattttggcatgtaaatagaagacctcgagattatgtagt 30200160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 105 - 249
Target Start/End: Complemental strand, 36514570 - 36514424
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt--agagagttggggtaacacctatggcag 202  Q
    ||||||| |||||||||||||| | ||||||||||||||||| | | ||||| |||||||| || || |||  |||||||||||||| ||||||| | ||    
T  36514570 tagcagagatgaggatgttgcgttggatgtgtggtaagactaaacgggatagaattagaaaggacaacattagagagagttggggtagcacctatagtag 36514471  T
Q  203 aaaaaatgatgaaaaatagacttaggtggtttgagtatatagagaga 249  Q
    |||| ||| |  ||| ||||||||||||||||| | || ||||||||    
T  36514470 aaaagatggtagaaactagacttaggtggtttgggcatgtagagaga 36514424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 252
Target Start/End: Original strand, 39811856 - 39812025
Alignment:
Q  87 atgaggatgaaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagt 182  Q
    ||||| || ||| |||| |||| || |||||||||||||  | ||||||||||||||||| | | ||||||||||||||||| || |||    |||||||    
T  39811856 atgagaataaaacaagcgtagcggatatgaggatgttgctttggatgtgtggtaagactagacgtgataggattagaaatgacaacattagagagagagt 39811955  T
Q  183 tggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaaga 252  Q
    ||||| | |||||||   |||||||||| |||||| | | ||||||| ||||| | || |||||||||||    
T  39811956 tggggcagcacctatcatagaaaaaatggtgaaaactcggcttaggtagtttgggcatgtagagagaaga 39812025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 271
Target Start/End: Complemental strand, 48736259 - 48736094
Alignment:
Q  110 gaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacctatggcagaaa 205  Q
    ||||||||||||||||| |  |||||||||||||||| ||||||||  |||||||||||  | |||    |||||||||||||| ||||||  | |||||    
T  48736259 gaaatgaggatgttgcgttgaatgtgtggtaagactagatgagataaaattagaaatgacgacattatagagagagttggggtagcacctacagtagaaa 48736160  T
Q  206 aaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagtta 271  Q
    | |||    ||| |||||||||||||||||   || ||||| |||||||| | |||||||||||||    
T  48736159 agatgggagaaactagacttaggtggtttgctcatgtagagcgaagacctgtggattatgtagtta 48736094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 262
Target Start/End: Complemental strand, 25579445 - 25579281
Alignment:
Q  96 aaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagt-tgggg--taaca 192  Q
    |||||||| |||  || |||||||||||||| | |||||||||||| ||||     |||||||||||||||||  | |||||||||  |||||  || ||    
T  25579445 aaataagcgtagaggagatgaggatgttgcgttggatgtgtggtaatacta-----gataggattagaaatgaccacattagagagagtggggagtagca 25579351  T
Q  193 cctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagatt 262  Q
    || || |||||||||||| || ||||||| ||||||||||||| | || |||||||||||| | ||||||    
T  25579350 cccatagcagaaaaaatggtggaaaataggcttaggtggtttggggatgtagagagaagacatgtagatt 25579281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 262
Target Start/End: Complemental strand, 19262788 - 19262637
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag--ttggggtaacacctatggcagaaaaaatg 210  Q
    ||||||||||| ||  |||| |||||||| |||| |   |||||  |||||||||| ||||||||||||  |||||||| ||||||| | |||||| |||    
T  19262788 atgaggatgttacgtgtgatatgtggtaatactagacatgatagagttagaaatgacaatattagagagagttggggtagcacctattgtagaaaagatg 19262689  T
Q  211 atgaaaaatagacttaggtggtttgagtatatagagagaagacctttagatt 262  Q
     |  ||| | | ||||||||||||||| || |||||||||||||| ||||||    
T  19262688 gtagaaacttggcttaggtggtttgagcatgtagagagaagacctgtagatt 19262637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 253
Target Start/End: Original strand, 47848599 - 47848743
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagag----agttggggtaacacctatggcagaaaaaa 208  Q
    |||||||||||| | | ||||||||||||||||| | | |||||||| |||| ||| || |||||||    |||||||||| | ||||| | |||||| |    
T  47848599 atgaggatgttgtgttggatgtgtggtaagactagacgggataggatcagaagtgataacattagagagagagttggggtagcgcctatagtagaaaaga 47848698  T
Q  209 tgatgaaaaatagacttaggtggtttgagtatatagagagaagac 253  Q
    || || ||||||| ||||||||||||| | || | ||||||||||    
T  47848699 tggtggaaaataggcttaggtggtttgggcatgtcgagagaagac 47848743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 271
Target Start/End: Original strand, 5335839 - 5336007
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagag--agttggggtaacacctatggcag 202  Q
    ||||||| |||||||||||||| |  |||||||||||||||| |    ||   ||||||||||| || |||||||  |||||||||| || |||| | ||    
T  5335839 tagcagagatgaggatgttgcgttgaatgtgtggtaagactagacagaatgcaattagaaatgataacattagagagagttggggtagcatctatagtag 5335938  T
Q  203 aaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagtta 271  Q
     ||| ||| |  ||| ||||||||||||||||| | |||||||||||||| || | |||| ||||||||    
T  5335939 gaaagatggtcgaaactagacttaggtggtttgggcatatagagagaagaactgtggattctgtagtta 5336007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 254
Target Start/End: Original strand, 37617861 - 37618015
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacctatggc 200  Q
    ||||||| |||||||||||||| | |||| |||||||||||| |  |||||||||||| ||||| |  |||    ||||||| |||||| ||||||| |     
T  37617861 tagcagagatgaggatgttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccattagagagagagtgggggtagcacctatagt 37617960  T
Q  201 agaaaaaatgat-gaaaaatagacttaggtggtttgagtatatagagagaagacc 254  Q
    ||||||  || | ||||||||| ||||| ||||||| | || |||||||||||||    
T  37617961 agaaaagttggtagaaaaataggcttagatggtttgggcatgtagagagaagacc 37618015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 25826806 - 25826759
Alignment:
Q  134 tgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||    
T  25826806 tgtggtaagaccatacgagataggattagaaatgaaaacattagagag 25826759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 27893864 - 27893778
Alignment:
Q  152 gataggattagaaatgaaaatattagagag--ttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttga 236  Q
    |||||||||||||| || ||||||||||||  ||| |||||||||||| | |||| | ||| || ||||||| ||||||||||||||    
T  27893864 gataggattagaaacgacaatattagagagagttgaggtaacacctatagtagaatagatggtggaaaataggcttaggtggtttga 27893778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 28542257 - 28542168
Alignment:
Q  96 aaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggg 186  Q
    |||||||  |||| || |||||| ||||||| | |||||||||||||||||  || ||||| ||||||||||  |||||||||||||||||    
T  28542257 aaataagtgtagcggagatgagggtgttgcgttggatgtgtggtaagactag-tgggatagaattagaaatggcaatattagagagttggg 28542168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 254
Target Start/End: Original strand, 33072853 - 33073022
Alignment:
Q  87 atgaggatgaaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt--agagagttg 184  Q
    ||||| || |||||||  ||||||| |||| ||||||||| | |||| |||||||||||| |  |||||||||||| ||||| |  |||  ||||||| |    
T  33072853 atgagaatcaaataagtgtagcagagatgatgatgttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccattagagagagtgg 33072952  T
Q  185 gggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacc 254  Q
    ||||| ||||||| | ||||||  || |  ||||||| ||||| || |||| | || |||||||||||||    
T  33072953 gggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacc 33073022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 47796476 - 47796430
Alignment:
Q  132 tgtgtggtaagactatatgagataggattagaaatgaaaatattaga 178  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  47796476 tgtgtggtaagactagatgggataggattagaaatgacaatattaga 47796430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 261
Target Start/End: Original strand, 36136756 - 36136841
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagat 261  Q
    |||||||||||||| ||||||| | |||||| ||| |  ||||||| ||||||| ||||| | |||||||||||| |||| |||||    
T  36136756 agagagttggggtagcacctatagtagaaaagatggtagaaaatagtcttaggttgtttgggcatatagagagaatacctatagat 36136841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 42187462 - 42187555
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    ||||||| |||||| |||||||   |||||| ||| || ||||||| ||||||||||||| | || || ||||||| ||| |||||||||||||    
T  42187462 agagagtcggggtagcacctataatagaaaagatggtggaaaataggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagt 42187555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 1740714 - 1740790
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||||| | ||||||| |||||||||  || | || |||||||||||| || |||||||||    
T  1740714 tagcagagatgaggatgttgcgttggatgtgtagtaagactaggtggggtaagattagaaatgagaacattagagag 1740790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 27021982 - 27021906
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaaga 252  Q
    |||||||||||||| ||||||| | ||||||  || |||||| ||| ||||||||||||| | || |||||||||||    
T  27021982 agagagttggggtagcacctatagtagaaaagttggtgaaaactaggcttaggtggtttgggcatgtagagagaaga 27021906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 267
Target Start/End: Complemental strand, 36102105 - 36101964
Alignment:
Q  130 gatgtgtggtaagactatatgagataggattagaaatgaaaatattagag----agttggggtaacacctatggcagaaaaaatgatgaaaaatagactt 225  Q
    ||||||||||||||||| ||| |||  |||||||||||| || ||| |||    |||   |||| |||||||   |||||| ||| || ||||||| |||    
T  36102105 gatgtgtggtaagactagatgggatgagattagaaatgacaacatttgaggaagagtgaaggtagcacctataatagaaaagatgttggaaaataggctt 36102006  T
Q  226 aggtggtttgagtatatagagagaagacctttagattatgta 267  Q
    |||||||||| | || |||||||||||||| |||||| ||||    
T  36102005 aggtggtttggggatgtagagagaagacctatagattttgta 36101964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 254
Target Start/End: Original strand, 43281601 - 43281744
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt--agagagttggggtaacacctatggcagaaaaaatg 210  Q
    |||||||||||||||| |||| |||||||||||| |  | |||||||||| ||||| |  |||  ||||||| |||||| ||||||| | ||||||  ||    
T  43281601 atgaggatgttgcgctggatgagtggtaagactagacaatataggattaggaatgacaccattagagagagtgggggtagcacctatagtagaaaagttg 43281700  T
Q  211 atgaaaaatagacttaggtggtttgagtatatagagagaagacc 254  Q
     |  ||||||| ||||| |||||||   || |||||||||||||    
T  43281701 gtagaaaataggcttagatggtttggacatgtagagagaagacc 43281744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 35713621 - 35713672
Alignment:
Q  130 gatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||||||||||||  || ||  ||||||||||||||||||||||||||||||    
T  35713621 gatgtgtggtaaggttagatatgataggattagaaatgaaaatattagagag 35713672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 23404340 - 23404398
Alignment:
Q  110 gaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatga 168  Q
    ||||||||||||||||||| |||| | ||||||||||||   ||||||||||| |||||    
T  23404340 gaaatgaggatgttgcgctggatgagcggtaagactatacatgataggattaggaatga 23404398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 14593678 - 14593719
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagacta 146  Q
    ||||||| |||||||||||||| | |||||||||||||||||    
T  14593678 tagcagagatgaggatgttgcgttggatgtgtggtaagacta 14593719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 16013201 - 16013242
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagacta 146  Q
    ||||||| |||||||||||||| | |||||||||||||||||    
T  16013201 tagcagagatgaggatgttgcgttggatgtgtggtaagacta 16013242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 18605390 - 18605341
Alignment:
Q  222 acttaggtggtttgagtatatagagagaagacctttagattatgtagtta 271  Q
    |||||||||||||||| || |||||||||||| | |||||||| ||||||    
T  18605390 acttaggtggtttgagcatgtagagagaagacatgtagattatatagtta 18605341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 18637600 - 18637649
Alignment:
Q  222 acttaggtggtttgagtatatagagagaagacctttagattatgtagtta 271  Q
    |||||||||||||||| || |||||||||||| | |||||||| ||||||    
T  18637600 acttaggtggtttgagcatgtagagagaagacatgtagattatatagtta 18637649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 18651034 - 18651083
Alignment:
Q  222 acttaggtggtttgagtatatagagagaagacctttagattatgtagtta 271  Q
    |||||||||||||||| || |||||||||||| | |||||||| ||||||    
T  18651034 acttaggtggtttgagcatgtagagagaagacatgtagattatatagtta 18651083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 35906566 - 35906490
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||||| | |||| |||||||||||| |   ||||||||||| ||||| |  |||||||||    
T  35906566 tagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagag 35906490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 45836837 - 45836769
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||||||||||||||| |||| ||||||||| || |  |||||||||||| ||||| |  |||||||||    
T  45836837 atgaggatgttgcgctggatgagtggtaagagtagacaagataggattaggaatgacaccattagagag 45836769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 8e-24; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 96 - 235
Target Start/End: Complemental strand, 42510385 - 42510245
Alignment:
Q  96 aaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaa-tgaaaatattagagagttggggtaacacc 194  Q
    |||||||||||||||| |||||||||||||  | ||||||||||||||||| ||| |||||| ||||||| ||| |||| ||| |||||||| || ||||    
T  42510385 aaataagcatagcagagatgaggatgttgcattggatgtgtggtaagactagatgggataggtttagaaattgataatactagggagttgggatagcacc 42510286  T
Q  195 tatggcagaaaaaatgatgaaaaatagacttaggtggtttg 235  Q
    ||| | |||||| ||  || ||||||| |||||||||||||    
T  42510285 tatagtagaaaagatagtggaaaataggcttaggtggtttg 42510245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 261
Target Start/End: Original strand, 54128289 - 54128455
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagaga----gttggggtaacacc 194  Q
    ||||| ||||||| |||||||||||||| |||||| ||||||| |||| | | ||||||||||  ||||| |  ||||||||    ||||||||| ||||    
T  54128289 taagcttagcagagatgaggatgttgcgtttgatgagtggtaaaactagacgcgataggattatgaatgacaccattagagagagtgttggggtagcacc 54128388  T
Q  195 tatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagat 261  Q
    ||| | |||||| ||| |  ||||||| ||||||||||||| | || |||||| ||||||| |||||    
T  54128389 tatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagaaaagacctgtagat 54128455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 269
Target Start/End: Complemental strand, 2341088 - 2340911
Alignment:
Q  96 aaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag----ttggggtaac 191  Q
    ||||||| ||||  || |||||||||||||  | ||||||||||||||||| |   ||||| |||||||||||||| |||||||||    |||||||| |    
T  2341088 aaataaggatagtggagatgaggatgttgcattggatgtgtggtaagactagacatgatagaattagaaatgaaaacattagagagggtgttggggtagc 2340989  T
Q  192 acctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    |||  | | |||||| ||| || |||||   |||| |||||||||| || |||||| |||| || |||||||||||||    
T  2340988 accattcgtagaaaagatggtggaaaatcatcttacgtggtttgagcatgtagagaaaagatctatagattatgtagt 2340911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 22902751 - 22902799
Alignment:
Q  133 gtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  22902751 gtgtggtaacactatatgcgataggattagaaatgaaaatattagagag 22902799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 269
Target Start/End: Complemental strand, 36820309 - 36820158
Alignment:
Q  120 tgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt--agagagttggggtaacacctatggcagaaaaaatgatgaaaa 217  Q
    ||||||| | ||||||||||||||||| | |||||||||||||||||||  | |||  |||||||||||||| |||||||   || ||| ||| || |||    
T  36820309 tgttgcgttggatgtgtggtaagactagacgagataggattagaaatgacgacattagagagagttggggtagcacctatattagcaaagatggtggaaa 36820210  T
Q  218 atagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
     ||| ||||||||||||    || || ||||||||||  |||||||||||||    
T  36820209 ctaggcttaggtggtttagacatgtaaagagaagacccatagattatgtagt 36820158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 249
Target Start/End: Complemental strand, 54365290 - 54365194
Alignment:
Q  154 taggattagaaatgaaaatattag--agagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagaga 249  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||| | |||||| |||  | ||||||| ||||||||||||| | || ||||||||    
T  54365290 taggattagaaatgaaaatattagagagagttggggtagcacctatagtagaaaatatggcggaaaatag-cttaggtggtttgggcatgtagagaga 54365194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 39601020 - 39600879
Alignment:
Q  131 atgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagactta 226  Q
    |||||||||||||||| ||| |||| |||||||||||| || |||    ||||||||||||||  |||||| | |||||| ||| || |||| |  ||||    
T  39601020 atgtgtggtaagactagatgggataagattagaaatgacaacattagagagagagttggggtagtacctatagtagaaaagatggtggaaaacaagctta 39600921  T
Q  227 ggtggtttgagtatatagagagaagacctttagattatgtag 268  Q
    ||||||||  | || || ||||||||||| |||||| |||||    
T  39600920 ggtggttttggcatgtaaagagaagacctgtagattctgtag 39600879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 261
Target Start/End: Original strand, 52138696 - 52138877
Alignment:
Q  84 aagatgaggatgaaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agag 179  Q
    |||||||| || || ||||  ||||||| |||||||||||||| | |||| |||||||||||| |   ||||||||||| ||||| |  |||    ||||    
T  52138696 aagatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagag 52138795  T
Q  180 agttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagat 261  Q
    ||| |||||| ||||||| | ||||||  || |  ||||||| ||||| ||||||| | || |||||||||||||| |||||    
T  52138796 agtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacctgtagat 52138877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 45728063 - 45728126
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatga 168  Q
    ||||||| |||||||||||||||| |||| |||||||||| | | || ||||||||||||||||    
T  45728063 tagcagagatgaggatgttgcgctggatgagtggtaagacgagacgaaataggattagaaatga 45728126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 345082 - 345000
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||||||||| ||||| ||||||||  | | ||| ||||||||||||| | |||||||||||||||||||  | |||||||||    
T  345082 taagcatagcggaaattaggatgttatgttggatttgtggtaagactagacgagataggattagaaatgatgacattagagag 345000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 23534952 - 23534858
Alignment:
Q  87 atgaggatgaaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||| || |||||||| |||| || | |||||||||||| | ||||| || ||| |||| || ||||| |||||||||||| ||||||||||||    
T  23534952 atgagaataaaataagcgtagcggagaagaggatgttgcgttagatgtttgataaaactagatcagataagattagaaatgacaatattagagag 23534858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 44134164 - 44134061
Alignment:
Q  130 gatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggt 229  Q
    |||||||| |||||||||  ||||| ||| ||||||| | || ||||| ||||||||||| | ||| | | |||||| ||| || |||||||||||||||    
T  44134164 gatgtgtgataagactat--gagatgggactagaaattacaacattagtgagttggggtagcgcctctagtagaaaagatggtggaaaatagacttaggt 44134067  T
Q  230 ggtttg 235  Q
    ||||||    
T  44134066 ggtttg 44134061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 50960922 - 50960844
Alignment:
Q  177 gagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacct 255  Q
    ||||||||||||| ||||||| | |||||| ||| |  ||||||| ||||||||||||| | || ||||||||||||||    
T  50960922 gagagttggggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacct 50960844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 3987039 - 3987116
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagac 253  Q
    |||||||||||||| ||||||| | |||||| ||| |  ||| ||||||||||||||||| | || ||||||||||||    
T  3987039 agagagttggggtatcacctatagtagaaaagatggtagaaactagacttaggtggtttgggaatgtagagagaagac 3987116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 269
Target Start/End: Original strand, 46140349 - 46140517
Alignment:
Q  103 catagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattag--agagttggggtaacacctatggc 200  Q
    ||||||||| |||| ||||||||  |  |||| | ||||||||| | |  ||| |||||||| ||| ||||||||  ||||||||||||| || | | |     
T  46140349 catagcagagatgatgatgttgctttgaatgtattgtaagactagacggtatatgattagaattgacaatattagtgagagttggggtaatacatgtagt 46140448  T
Q  201 agaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    |||||| | | || ||| |||||| ||||||||||   ||||||||||||||||| |||||| ||||||    
T  46140449 agaaaagacggtggaaactagactcaggtggtttggacatatagagagaagacctgtagattctgtagt 46140517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 254
Target Start/End: Original strand, 25191296 - 25191447
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag--ttggggtaacacctatggcag 202  Q
    ||||||| |||||||||||||||| |||| |||||||||||| |   |||| |||||  ||||| |  |||||||||  | |||||| ||||||| | ||    
T  25191296 tagcagagatgaggatgttgcgctggatgagtggtaagactagacatgatatgattaagaatgacatcattagagagaatgggggtagcacctatagtag 25191395  T
Q  203 aaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacc 254  Q
    ||||| ||    ||||||||||||| |||||||   || |||||||||||||    
T  25191396 aaaaattggaagaaaatagacttagatggtttggacatgtagagagaagacc 25191447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 232
Target Start/End: Original strand, 50249289 - 50249432
Alignment:
Q  96 aaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagatag---gattagaaatgaaaatatt----agagagttggggt 188  Q
    ||||||||||||| || |||| |||||| || | ||||||||||| ||||| | |||||||   |||||||||||| || |||    |||||||||||||    
T  50249289 aaataagcatagcggagatgatgatgtttcgttggatgtgtggtaggactagacgagataggatgattagaaatgataacattagagagagagttggggt 50249388  T
Q  189 aacacctatggcagaaaaaatgatgaaaaatagacttaggtggt 232  Q
    | | | ||| | |||||| ||| || ||| ||||||||||||||    
T  50249389 agcgcgtatagtagaaaagatggtggaaactagacttaggtggt 50249432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 50621741 - 50621649
Alignment:
Q  89 gaggatgaaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||||| |||||||  |||| || ||||| |||||||  ||||| ||||||||||||||    ||||||||||||||||| || |||||||||    
T  50621741 gaggataaaataagtgtagcggagatgagaatgttgcatttgatatgtggtaagactatgaatgataggattagaaatgacaacattagagag 50621649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 48777555 - 48777509
Alignment:
Q  130 gatgtgtggtaagactatatgagataggattagaaatgaaaatatta 176  Q
    ||||||||||||||||| | |||||| ||||| ||||||||||||||    
T  48777555 gatgtgtggtaagactaaaagagatatgattaaaaatgaaaatatta 48777509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 30573040 - 30572995
Alignment:
Q  224 ttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    |||||||||||||  || |||||||||||||| |||||||||||||    
T  30573040 ttaggtggtttgatcatgtagagagaagacctatagattatgtagt 30572995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 269
Target Start/End: Complemental strand, 34719362 - 34719269
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    |||||||||||||| ||||||| | |||||| ||| || ||| |  ||||||||| |||||  ||||||||||||| ||| | |||| ||||||    
T  34719362 agagagttggggtagcacctatcgtagaaaagatggtggaaagtcaacttaggtgttttgaacatatagagagaaggcctgttgattttgtagt 34719269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 2198836 - 2198876
Alignment:
Q  153 ataggattagaaatgaaaatattagagagttggggtaacac 193  Q
    ||||||||| |||||| ||||||||||||||| ||||||||    
T  2198836 ataggattaaaaatgacaatattagagagttgaggtaacac 2198876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 38054694 - 38054626
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||| |||||||| |  ||| |||||||||||| | | ||||||||||||||||| || |||||||||    
T  38054694 atgagaatgttgcgttgaatgggtggtaagactagacgggataggattagaaatgataacattagagag 38054626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 46568033 - 46568109
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||| | | |||||||| |||||||| |  |||| | ||||||||||| || |||||||||    
T  46568033 tagcagagatgaggatgttgtgttggatgtgtgttaagactagaccagattgaattagaaatgacaacattagagag 46568109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 51448074 - 51447998
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||||| | |||| |||||||||||| |   ||||||||||| ||||| |  |||||||||    
T  51448074 tagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagag 51447998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 55244245 - 55244345
Alignment:
Q  131 atgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtg 230  Q
    |||||||||||||||  | | |||| |||||| ||||| || ||||||||||||| | ||||||||| | |||||| ||| || |||  || ||||||||    
T  55244245 atgtgtggtaagacttgacgggataagattagtaatgacaacattagagagttggtgcaacacctatagtagaaaagatggtggaaacaaggcttaggtg 55244344  T
Q  231 g 231  Q
    |    
T  55244345 g 55244345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 5e-22; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 101 - 235
Target Start/End: Complemental strand, 11002790 - 11002654
Alignment:
Q  101 agcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt--agagagttggggtaacacctatg 198  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| | ||| ||||| ||||||||||| || |||  |||||||| ||||| ||||||      
T  11002790 agcatagcagagatgaggatgttgcgctggatgtgtggtaagacgagatgggatagaattagaaatgacaacattagagagagttcgggtagcacctaca 11002691  T
Q  199 gcagaaaaaatgatgaaaaatagacttaggtggtttg 235  Q
    | |||||| ||| |  ||| |||||||||||||||||    
T  11002690 gtagaaaacatggtagaaactagacttaggtggtttg 11002654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 269
Target Start/End: Original strand, 9235011 - 9235149
Alignment:
Q  130 gatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggt 229  Q
    ||||||||||||||||| | | |||||||||| |||||| || ||||||||||||| | | || |||| | || |||||||| || || | |||||||||    
T  9235011 gatgtgtggtaagactagacgggataggattataaatgacaacattagagagttggagaagcatctatagtag-aaaaatgacgagaactcgacttaggt 9235109  T
Q  230 ggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    | |||||| || |||||||||||| | |||||| ||||||    
T  9235110 gttttgagcatgtagagagaagacttgtagattctgtagt 9235149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 269
Target Start/End: Original strand, 37124497 - 37124652
Alignment:
Q  116 aggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatta--gagagttggggtaacacctatggcagaaaaaatgatg 213  Q
    ||||||||||| ||| ||||| | ||||||| |||| ||   |||||||||||||| ||||  |||||| |||||| ||||||| |  ||||| ||||||    
T  37124497 aggatgttgcgtttggtgtgttgaaagactagatgaaatcatattagaaatgaaaaaattaaagagagtcggggtagcacctatagttgaaaagatgatg 37124596  T
Q  214 aaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
     ||||||| |||| ||  ||||||| | | |||||||||||| || ||||||||||    
T  37124597 gaaaataggcttaagtcatttgagtttgttgagagaagacctatatattatgtagt 37124652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 684032 - 683981
Alignment:
Q  130 gatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  684032 gatgtgtggtaagactagatgagatagaattagaaatgacaatattagagag 683981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 266
Target Start/End: Original strand, 6888935 - 6889075
Alignment:
Q  130 gatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagactt 225  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||    | |||||||||||| ||| ||| |  ||||| ||| || ||||||| |||    
T  6888935 gatgtgtggtaagactagatgagatatgattagaaatgacaatattacagaaagagttggggtagcacgtatagaggaaaagatggtggaaaataggctt 6889034  T
Q  226 aggtggtttgagtatatagagagaagacctttagattatgt 266  Q
    | ||||||||   || |||||||||||| | | ||||||||    
T  6889035 aagtggtttggacatgtagagagaagacttgtggattatgt 6889075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 275
Target Start/End: Complemental strand, 10083109 - 10082930
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag----ttggggtaacacc 194  Q
    ||||| ||||||  |||||||||||||  ||||||||||||||||||| | | ||||| ||||||||||| || ||||| |||    |||||||| ||||    
T  10083109 taagcgtagcagggatgaggatgttgct-ttgatgtgtggtaagactagacgggatagaattagaaatgagaacattagggagagcattggggtatcacc 10083011  T
Q  195 tatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagttaagag 275  Q
    ||| | |||||| ||| |  ||| |||||||| |||||||  | || |||||||||||| | | |||| |||||| |||||    
T  10083010 tatagtagaaaagatggtagaaactagacttaagtggtttcggcatgtagagagaagacttgtggattctgtagtaaagag 10082930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 255
Target Start/End: Complemental strand, 41833907 - 41833793
Alignment:
Q  143 actatatgagataggattagaaatgaaaatattagagagttggggtaacacctatgg--cagaaaaaatgatgaaaaatagacttaggtggtttgagtat 240  Q
    |||||||| ||||||||||| ||||  |||||||||||||||||||| |||||||||   |||||| ||| || || |||  ||||||||||||| | ||    
T  41833907 actatatgggataggattaggaatgttaatattagagagttggggtagcacctatggtatagaaaagatggtggaacatatgcttaggtggtttgggcat 41833808  T
Q  241 atagagagaagacct 255  Q
     |||||| |||||||    
T  41833807 gtagagacaagacct 41833793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 265
Target Start/End: Original strand, 33667188 - 33667297
Alignment:
Q  158 attagaaatgaaaatatta--gagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacct 255  Q
    ||||||||||| || ||||  ||||||||||||| ||||||| | |||||| ||| |  ||| ||||||||||||||||| | || ||||||||||||||    
T  33667188 attagaaatgacaacattaacgagagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagacct 33667287  T
Q  256 ttagattatg 265  Q
     | |||||||    
T  33667288 gtggattatg 33667297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 269
Target Start/End: Original strand, 30588381 - 30588534
Alignment:
Q  116 aggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaaaaaatgatgaa 215  Q
    |||||||||||   ||||||||||||||  | |||||||| |||||||||||| |||||||||||||| | ||||||  |||   |||||| ||| || |    
T  30588381 aggatgttgcgtgggatgtgtggtaagatcaaatgagatatgattagaaatgacaatattagagagttagagtaacatgtataatagaaaagatggtgga 30588480  T
Q  216 aaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    ||||||  ||| |||||||| | ||||   |||||||| | |||||| ||||||    
T  30588481 aaataggtttaagtggtttgggcatattcggagaagacttgtagattctgtagt 30588534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 14667699 - 14667814
Alignment:
Q  130 gatgtgtggtaagactatatgagataggattagaaatgaaaatattagag----------agttggggtaacacctatggcagaaaaaatgatgaaaaat 219  Q
    |||||||| |||||||| ||||| ||| ||||||||||| ||||||||||          |||||||||| ||||||| | |||||| ||| || |||||    
T  14667699 gatgtgtgataagactagatgaggtagaattagaaatgacaatattagagagagagagagagttggggtagcacctatagtagaaaagatggtggaaaat 14667798  T
Q  220 agacttaggtggtttg 235  Q
    ||||||||||||||||    
T  14667799 agacttaggtggtttg 14667814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 21093701 - 21093768
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagaga 180  Q
    |||||||||||||| |  |||||||||||||||| ||| ||| | ||||||||||| |||||||||||    
T  21093701 atgaggatgttgcgttgtatgtgtggtaagactagatgtgatggaattagaaatgacaatattagaga 21093768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 266
Target Start/End: Original strand, 28676562 - 28676677
Alignment:
Q  151 agataggattagaaatgaaaatattagagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaa 250  Q
    ||||| |||||||||| | || | || |||||| ||||| || |||| | |||||| ||| || ||||||| ||||||||||||  | || |||||||||    
T  28676562 agatatgattagaaataacaacaatatagagttcgggtagcagctatagtagaaaagatggtggaaaatagtcttaggtggtttcggcatgtagagagaa 28676661  T
Q  251 gacctttagattatgt 266  Q
    |||||||| |||||||    
T  28676662 gacctttaaattatgt 28676677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 252
Target Start/End: Original strand, 1275176 - 1275332
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag---ttggggtaacacct 195  Q
    ||||||||||||| |||||||||||||| | |||| |||||||||||| |   | ||||||||| ||||| |  |||||||||    ||||||| |||||    
T  1275176 taagcatagcagagatgaggatgttgcgttggatgagtggtaagactagacatggtaggattaggaatgacaccattagagagagagtggggtagcacct 1275275  T
Q  196 atggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaaga 252  Q
    || | ||||||  || |  ||||||| ||||| ||||||| | || |||||||||||    
T  1275276 atagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 1275332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 255
Target Start/End: Original strand, 14749267 - 14749378
Alignment:
Q  148 atgagataggattagaaatgaaaatatt----agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatata 243  Q
    |||||||||||||||||||||||| |||    |||||||||| ||| ||||||| | ||||||| || |  ||| ||||||||| |||||||   || ||    
T  14749267 atgagataggattagaaatgaaaacattagagagagagttggtgtagcacctatagtagaaaaattggtagaaactagacttagatggtttggacatgta 14749366  T
Q  244 gagagaagacct 255  Q
    ||||||||||||    
T  14749367 gagagaagacct 14749378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 16134550 - 16134481
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatga 168  Q
    |||| |||||| |||||||||||||| | | ||||| ||||||||||| ||||||||  |||||||||||    
T  16134550 taagtatagcataaatgaggatgttgtgttggatgtatggtaagactagatgagataaaattagaaatga 16134481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 2075839 - 2075763
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||||| | |||| || ||||||||| |  |||||||||||| ||||| || |||||||||    
T  2075839 tagcagagatgaggatgttgcgttggatgagttgtaagactagacaagataggattaggaatgacaacattagagag 2075763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 6368283 - 6368227
Alignment:
Q  112 aatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatga 168  Q
    ||||||||||||||| | |||||||||||||| || | ||||||| |||||||||||    
T  6368283 aatgaggatgttgcgttagatgtgtggtaagaatagacgagatagaattagaaatga 6368227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 27998329 - 27998381
Alignment:
Q  94 tgaaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagacta 146  Q
    |||| |||||||| |||| |||||||||||||| | |||||||||||||||||    
T  27998329 tgaattaagcatatcagagatgaggatgttgcgttggatgtgtggtaagacta 27998381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 32516483 - 32516606
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag--ttggggtaacacctatggcagaaaaaatg 210  Q
    |||| ||||||| | | ||||||||||||||||| |   |||||  |||||||||| || |||||||||  |||| ||||||| ||| | |||||| |||    
T  32516483 atgatgatgttgtgttggatgtgtggtaagactagacaggatagacttagaaatgacaacattagagagagttggagtaacacttatagtagaaaagatg 32516582  T
Q  211 atgaaaaatagacttaggtggttt 234  Q
     || ||||||| ||||||||||||    
T  32516583 gtggaaaataggcttaggtggttt 32516606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 27887 - 27946
Alignment:
Q  178 agagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgag 237  Q
    |||||| ||||| ||||||| | |||||| |||||| ||||||| |||||||||||||||    
T  27887 agagttagggtagcacctatagtagaaaagatgatggaaaataggcttaggtggtttgag 27946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 21952276 - 21952331
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatga 168  Q
    |||||||||||||| |  |||||||||||||||| | |||||| ||||||||||||    
T  21952276 atgaggatgttgcgttgcatgtgtggtaagactagacgagataagattagaaatga 21952331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 254
Target Start/End: Complemental strand, 31636254 - 31636132
Alignment:
Q  134 tgtggtaagactatatgagataggattagaaatgaaaatattagaga--gttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtgg 231  Q
    ||||||||||||| |   ||||| |||| |||||| |  ||||||||  ||||||||| ||||||| | |||||| ||| |  ||| |||||||||||||    
T  31636254 tgtggtaagactagactggatagaattataaatgacagcattagagaaagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtgg 31636155  T
Q  232 tttgagtatatagagagaagacc 254  Q
    |||| | || |||||||||||||    
T  31636154 tttgggcatgtagagagaagacc 31636132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 7678405 - 7678471
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagag 179  Q
    |||||||||||||| | ||| ||||| ||||||| ||  ||||||||||||||||| || |||||||    
T  7678405 atgaggatgttgcgttggatctgtggcaagactagataggataggattagaaatgacaacattagag 7678471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 79505 - 79598
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    ||||||||||||||  |||||| | |||||| ||| || |||| | | ||||||||||||   || |||||||||||||| |||||| ||||||    
T  79505 agagagttggggtagtacctatagtagaaaagatggtggaaaacataattaggtggtttggacatgtagagagaagacctatagattctgtagt 79598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 5305524 - 5305609
Alignment:
Q  96 aaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||| | | | |||||||||| | ||||||||||||||||| |  |||||| ||||||||| | || |||||||||    
T  5305524 aaataagaatagcaaagacggggatgttgcgttggatgtgtggtaagactagacaagatagaattagaaataacaacattagagag 5305609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 28187042 - 28186957
Alignment:
Q  96 aaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||||| | |||| ||||| |||||||  | ||||||||||||||||| |   | ||||||||||||||| || |||||||||    
T  28187042 aaataagcacatcagagatgagaatgttgcattggatgtgtggtaagactagacatggtaggattagaaatgacaacattagagag 28186957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 29938132 - 29938193
Alignment:
Q  201 agaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagatt 262  Q
    |||||| ||| || ||||||| |||||||||||| ||  |||||||||||||||| ||||||    
T  29938132 agaaaagatggtggaaaataggcttaggtggtttaagcctatagagagaagacctgtagatt 29938193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 38341760 - 38341723
Alignment:
Q  131 atgtgtggtaagactatatgagataggattagaaatga 168  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  38341760 atgtgtggtaagactatacgagataggtttagaaatga 38341723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 41110115 - 41110030
Alignment:
Q  96 aaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||||||| ||||| | ||||  |||||||||| ||||||| || |||||| |||  |||||||||||||||| || | |||||||    
T  41110115 aaataagcgtagcaaagatgaaaatgttgcgctggatgtgtagtgagactagatggaataggattagaaatgacaacactagagag 41110030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 1287954 - 1287878
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||||| | |||| |||||||||||| |   ||||||||||| ||||| |  |||||||||    
T  1287954 tagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacatcattagagag 1287878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 269
Target Start/End: Complemental strand, 7359593 - 7359457
Alignment:
Q  136 tggtaagactatatgagataggattagaaatgaaaatattagagag----ttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtgg 231  Q
    ||||||||||  | ||||||| ||||||||||| ||| ||||||||    ||  |||||||||||| | |||||| ||| || |||||||  ||||||||    
T  7359593 tggtaagactggacgagatagaattagaaatgacaatgttagagagagagttcaggtaacacctatagtagaaaatatggtggaaaataggtttaggtgg 7359494  T
Q  232 tttgagtatatagagagaagacctttagattatgtagt 269  Q
    |||| | || |||||||||||  | |||||| ||||||    
T  7359493 tttg-gcatgtagagagaagatatgtagattctgtagt 7359457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 24178427 - 24178483
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggatta 161  Q
    ||||||| |||||||||||||| | |||| ||||||||||||||   ||||||||||    
T  24178427 tagcagagatgaggatgttgcgttggatgagtggtaagactatacatgataggatta 24178483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 34194850 - 34194767
Alignment:
Q  116 aggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt--agagagttggggtaacacctat 197  Q
    ||||||||| | | |||||||||||| |||| |   |||||||||||||||| ||| |||  ||||||||||| ||||||||||    
T  34194850 aggatgttgtgttggatgtgtggtaaaactagacaggataggattagaaatgtaaacattagagagagttgggataacacctat 34194767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 42199303 - 42199371
Alignment:
Q  201 agaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    |||||| ||| || ||| ||||||||||||||||| | || |||||||||||| | |||||| ||||||    
T  42199303 agaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgtagt 42199371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 262
Target Start/End: Original strand, 1661334 - 1661508
Alignment:
Q  96 aaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaa----aatatt----agagagttgggg 187  Q
    |||||||||||||||| |||| ||||||| | |  |||| || |||||||| ||| ||||||||||||||||||    ||||||    ||||||||||||    
T  1661334 aaataagcatagcagagatgaagatgttgtgttgaatgtctgataagactagatgtgataggattagaaatgaatgacaatatttgagagagagttgggg 1661433  T
Q  188 taacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagatt 262  Q
    || ||||||| | |||||| ||| || ||||||| || || ||||||||| || |||||||||||||| ||||||    
T  1661434 tagcacctatagtagaaaagatggtggaaaataggctcagatggtttgagcatgtagagagaagacctatagatt 1661508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 271
Target Start/End: Complemental strand, 39422412 - 39422238
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt---agagagttggggtaacacct 195  Q
    ||||| |||| |||||||| |||||| | | ||||||||||| || |||||||||||| ||||||||||| ||||||   |||||||||| ||||||| |    
T  39422412 taagcgtagctgaaatgagaatgttgtgttagatgtgtggtaggattatatgagatagaattagaaatgacaatattagaagagagttggagtaacacat 39422313  T
Q  196 atggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagtta 271  Q
    || | |||||| ||  |  ||| |||||||||||| || ||  || |||||||||||| | |||||||||||||||    
T  39422312 atagtagaaaagatagtagaaactagacttaggtgcttgga-catgtagagagaagacatgtagattatgtagtta 39422238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 245
Target Start/End: Original strand, 35672618 - 35672745
Alignment:
Q  118 gatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaaaaaatgatgaaaa 217  Q
    ||||||||  || ||||||||||| |||| |||||||||||||||||||||  | || | || ||||||||| ||||||| | |||||| | ||||| ||    
T  35672618 gatgttgcatttaatgtgtggtaaaactagatgagataggattagaaatgaccacataatagtgttggggtagcacctatagtagaaaagacgatgagaa 35672717  T
Q  218 atagacttaggtggtttgagtatataga 245  Q
    ||||  |||||||||||| | |||||||    
T  35672718 atagttttaggtggtttgggcatataga 35672745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 43423711 - 43423804
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    |||||||||||||||||||||| | |||||| ||| || ||| ||| |||||||||||||   || |||||||||||| | |||||||||||||    
T  43423711 agagagttggggtaacacctatagtagaaaagatggtggaaactaggcttaggtggtttggccatgtagagagaagacttgtagattatgtagt 43423804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 267
Target Start/End: Original strand, 52837528 - 52837608
Alignment:
Q  187 gtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgta 267  Q
    ||||||||||| | |||| ||||| || ||||||||||||||  |||||||||| |||||||||||||| |||||| ||||    
T  52837528 gtaacacctattgtagaataaatggtggaaaatagacttagggagtttgagtatgtagagagaagacctatagattgtgta 52837608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 269
Target Start/End: Complemental strand, 35828887 - 35828747
Alignment:
Q  133 gtgtggtaagactatatgagataggattagaaatgaaaatattagagag----ttggggtaacacctatggcagaaaaaatgatgaaaaatagacttagg 228  Q
    ||||| ||||||||  || |||| |||||||||||| ||||||||||||    || | ||| ||||||||| |||||| ||| || |||||||  |||||    
T  35828887 gtgtgataagactaggtgtgataagattagaaatgacaatattagagagagagtttgagtagcacctatggtagaaaagatggtggaaaatagggttagg 35828788  T
Q  229 tggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    |||||||    | |||||||||||||| |||||||||||||    
T  35828787 tggtttggacgtgtagagagaagacctatagattatgtagt 35828747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 2544591 - 2544677
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagatt 262  Q
    |||||||||||||| ||||||| | |||||| ||| || |||| ||||||||||||||||   || |||||||||||||| ||||||    
T  2544591 agagagttggggtagcacctatagtagaaaagatggtggaaaacagacttaggtggtttggacatgtagagagaagacctatagatt 2544677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 4590879 - 4590805
Alignment:
Q  115 gaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggta 189  Q
    |||||||||||| |  ||||| ||| |||||| |  |||||||||||||||||| ||||||||||||||||||||    
T  4590879 gaggatgttgcgttgaatgtgcggtgagactagacaagataggattagaaatgacaatattagagagttggggta 4590805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 254
Target Start/End: Original strand, 9509229 - 9509388
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacc 194  Q
    ||||| ||||||| |||||||||||| | | |||| ||| |||||||| |   |||| |||||||||||| |  |||    |||||||||||||| ||||    
T  9509229 taagcgtagcagagatgaggatgttgtgttggatgagtgataagactagacaggatatgattagaaatgacaccattagagagagagttggggtagcacc 9509328  T
Q  195 tatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacc 254  Q
    ||| | |||||| ||| | |||||||| ||||||| ||||| | || |||||||||||||    
T  9509329 tatagtagaaaagatggtaaaaaataggcttaggtagtttgggcatgtagagagaagacc 9509388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 12135655 - 12135747
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaaaa 206  Q
    |||||||||||||||| ||| ||||||||||||| | || ||||||||||||| ||  | |||||||||||||| | |||||||| | ||||||    
T  12135655 atgaggatgttgcgctggatatgtggtaagactaaacga-ataggattagaaacgacgacattagagagttgggatcacacctatagtagaaaa 12135747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 39140468 - 39140590
Alignment:
Q  136 tggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtgg 231  Q
    ||||||||||| ||||||||||||||| |||||||  |||    |||||||||| ||| ||||||| | |||||| |||   |||||| | |||||||||    
T  39140468 tggtaagactagatgagataggattaggaatgaaaccattacagagagagttggcgtagcacctatagtagaaaagatggcaaaaaattggcttaggtgg 39140567  T
Q  232 tttgagtatatagagagaagacc 254  Q
    |||| | || |||||||||||||    
T  39140568 tttgggcatgtagagagaagacc 39140590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 34792714 - 34792638
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||||||| |||| |||||||||||| |   ||||||||||| |||||||  |||||||||    
T  34792714 tagcagagatgaggatgttgcgctggatgagtggtaagactagacatgataggattaggaatgaaaccattagagag 34792638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 16822379 - 16822312
Alignment:
Q  110 gaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattag 177  Q
    ||||||||||||||| | | |||||||||||| |||| || |||||||||||||||||| | ||||||    
T  16822379 gaaatgaggatgttgtgttggatgtgtggtaatactagataagataggattagaaatgacagtattag 16822312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 236
Target Start/End: Original strand, 6641049 - 6641181
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatga--aaatattagagagttggggtaacacctatggcag 202  Q
    |||||||||||| ||||||||| | ||||||||||| ||||| |||  |||| |||||||||||  | |||  |||||||| || ||||||| || | ||    
T  6641049 tagcagaaatgatgatgttgcgttggatgtgtggtatgactagatggcatagaattagaaatgatgatataggagagagtt-ggataacaccaatagtag 6641147  T
Q  203 aaaaaatgatgaaaaatagacttaggtggtttga 236  Q
    | || |||||  ||| ||||||||||||||||||    
T  6641148 agaagatgatagaaattagacttaggtggtttga 6641181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 52442875 - 52442793
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||| ||||||| |||||||||||| | | ||||||||||||||||| |  ||||| |||||||||||| || ||| |||||    
T  52442875 taagcgtagcagacatgaggatgttgtgttggatgtgtggtaagactagacaagataagattagaaatgagaacattggagag 52442793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 4379917 - 4379998
Alignment:
Q  100 aagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||| |||| || |||||||||||| | | ||||||||||||||||| |  ||||| |||||||||||| || |||||||||    
T  4379917 aagcttagctgagatgaggatgttgtgttggatgtgtggtaagactagaaaagatatgattagaaatgacaacattagagag 4379998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 233
Target Start/End: Complemental strand, 9599765 - 9599627
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacc 194  Q
    ||||| ||||||| |||||||||||| | | |||| |||||||||||| | | |||| |||||| ||||| |  |||    |||||||||| ||||||||    
T  9599765 taagcgtagcagagatgaggatgttgtgttggatgagtggtaagactagacgggatatgattaggaatgacatcattagagagagagttggagtaacacc 9599666  T
Q  195 tatggcagaaaaaatgatgaaaaatagacttaggtggtt 233  Q
    ||| | |||||| ||| |  ||||||| |||||||||||    
T  9599665 tatagtagaaaagatggtagaaaataggcttaggtggtt 9599627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 269
Target Start/End: Complemental strand, 14226198 - 14226026
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt--agagagttggggtaacaccta 196  Q
    ||||||||||||| | |||||| ||| | | ||||||||||||| ||| |   ||||||||||||||||  || |||  |||||||||  ||| ||||||    
T  14226198 taagcatagcagatacgaggattttgtgttggatgtgtggtaaggctagacatgataggattagaaatggcaacattggagagagttgcagtagcaccta 14226099  T
Q  197 tggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    |   |||||| ||| || ||||||| ||||||||||||| | || ||||||| |  ||| |||||| ||||||    
T  14226098 tcatagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagaggattcctgtagattttgtagt 14226026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 32404807 - 32404730
Alignment:
Q  185 gggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagatt 262  Q
    ||||||||||||| | | |||| ||| || ||||||| |||||||||||||  ||| |||||||||||||| ||||||    
T  32404807 gggtaacacctatagtaaaaaagatggtggaaaataggcttaggtggtttggatatgtagagagaagacctgtagatt 32404730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 254
Target Start/End: Original strand, 1210662 - 1210815
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacctatggc 200  Q
    ||||||| |||||||||||||| | |||| |||||||||||| |   ||||||||||| ||||| |  |||    ||||||| |||||| ||||||| |     
T  1210662 tagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgggggtagcacctatagt 1210761  T
Q  201 agaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacc 254  Q
    ||||||  || |  ||||||| ||||| ||||||| | || |||||||||||||    
T  1210762 agaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 1210815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 40419556 - 40419632
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| ||||||||| |||| |  |||| |||||| |||| ||||||||| ||||||||||| || |||||||||    
T  40419556 tagcagagatgaggatggtgcgttgaatgtatggtaaaactagatgagatagaattagaaatgacaacattagagag 40419632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 40920894 - 40920826
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||| ||||||||  | |||||||||||||| || | ||||||||||||||||| | ||||||||||||    
T  40920894 atgaagatgttgcattggatgtgtggtaagattagacgagataggattagaaattacaatattagagag 40920826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 275
Target Start/End: Complemental strand, 48431689 - 48431597
Alignment:
Q  183 tggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagttaagag 275  Q
    ||||||| | ||||| | |||||| ||| || ||||||| ||||||||||||| | || |||||||||||| | |||||| |||||| |||||    
T  48431689 tggggtagcccctatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagagaagacttgtagattttgtagtaaagag 48431597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 26016348 - 26016395
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagacta 146  Q
    ||||| ||||||| |||||||||||||| | |||||||||||||||||    
T  26016348 taagcgtagcagagatgaggatgttgcgttggatgtgtggtaagacta 26016395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 26016429 - 26016508
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacct 255  Q
    ||||||||||||||||||||||   |||||| ||| |  ||| |||| |||||||||||| |||| |||| |||||||||    
T  26016429 agagagttggggtaacacctatatgagaaaagatggtagaaactagatttaggtggtttgggtatgtagaaagaagacct 26016508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 253
Target Start/End: Complemental strand, 32231311 - 32231167
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacctatggcagaaaaaa 208  Q
    |||||||||||||||| |||| ||||||||| || |   ||||||||||| ||||| |  |||    ||||||| |||||| ||||||| | |||||||     
T  32231311 atgaggatgttgcgctagatgagtggtaagattagacatgataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaaat 32231212  T
Q  209 tgatgaaaaatagacttaggtggtttgagtatatagagagaagac 253  Q
    || |  ||||||| ||||| ||||||| | || ||||||||||||    
T  32231211 tggtagaaaataggcttagatggtttgggcatgtagagagaagac 32231167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 252
Target Start/End: Original strand, 8671837 - 8671986
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt--agagagttggggtaacacctatggcag 202  Q
    ||||||| || ||||||||||| | |||| |||||||||||| |   ||||||||||| ||||| |  |||  ||||||| |||||| ||||||| | ||    
T  8671837 tagcagagataaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagtgggggtagcacctatagtag 8671936  T
Q  203 aaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaaga 252  Q
    ||||  || |  ||||||| ||||| ||||||| | || |||||||||||    
T  8671937 aaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 8671986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 43240669 - 43240591
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacc 254  Q
    ||||||| |||||| ||||||| | ||||||| ||||  ||||||| ||||| | ||||||| || |||||||||||||    
T  43240669 agagagtgggggtagcacctatagtagaaaaattgatagaaaataggcttagatagtttgagcatgtagagagaagacc 43240591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 16273171 - 16273122
Alignment:
Q  119 atgttgcgcttgatgtgtggtaagactatatgagataggattagaaatga 168  Q
    |||||||| | ||||||||||||||||| |||||||  ||||||||||||    
T  16273171 atgttgcgttggatgtgtggtaagactagatgagatgagattagaaatga 16273122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 168
Target Start/End: Original strand, 19936421 - 19936502
Alignment:
Q  87 atgaggatgaaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatga 168  Q
    ||||| || ||||||||||||| || ||||| |||||| | | |||| |||||||||||| ||| ||||||| ||| |||||    
T  19936421 atgagaatcaaataagcatagcggagatgagaatgttgtgttggatgagtggtaagactagatgggataggaataggaatga 19936502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 696194 - 696262
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||||||||||||||| |||| |||||||||||| |   ||||||||||| ||||| |  |||||||||    
T  696194 atgaggatgttgcgctggatgagtggtaagactagacaggataggattaggaatgacaccattagagag 696262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 4001812 - 4001744
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||||||||||||||| |||| |||||||||||| |  | |||||||||| ||||| |  |||||||||    
T  4001812 atgaggatgttgcgctagatgagtggtaagactagacaaaataggattaggaatgacaccattagagag 4001744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 9592651 - 9592727
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||||| | |||| |||||||||||| |   ||||||||||| ||||| |  |||||||||    
T  9592651 tagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagag 9592727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 15085859 - 15085927
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||||||||||||||| || | |||||||||||| ||  ||||||||||| ||||| |  |||||||||    
T  15085859 atgaggatgttgcgctggacgagtggtaagactagataggataggattaggaatgacaccattagagag 15085927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 30202495 - 30202419
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||||| | |||| |||||||||||| |   ||||||||||| ||||| |  |||||||||    
T  30202495 tagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagag 30202419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 254
Target Start/End: Complemental strand, 51441130 - 51440977
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacctatggc 200  Q
    ||||||| |||||||||||||  | || | |||||||||||| |   ||||||||||| ||||| |  |||    ||||||| |||||||||||||| |     
T  51441130 tagcagagatgaggatgttgcattggacgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtaacacctatagt 51441031  T
Q  201 agaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacc 254  Q
    ||||||  || |  ||||||| ||||| ||||||| | || |||||||||||||    
T  51441030 agaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 51440977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 268
Target Start/End: Original strand, 17900391 - 17900564
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattaga----gagttggggtaacacc 194  Q
    ||||| |||||||||||||||||||||| | ||||||||||||||||| ||| ||||  |||||||||||  | ||||||    ||||||||||| ||||    
T  17900391 taagcgtagcagaaatgaggatgttgcgttggatgtgtggtaagactagatgggataaaattagaaatgacgacattagagacggagttggggtagcacc 17900490  T
Q  195 tatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtag 268  Q
    ||| | |||||| | | |  ||| |||||| | |||||||| | |  |||||||||||||| | ||||||||||    
T  17900491 tatagtagaaaagacggtagaaactagactcatgtggtttgggcacgtagagagaagacctgtggattatgtag 17900564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 269
Target Start/End: Original strand, 54470132 - 54470292
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacctatggcagaaaaaa 208  Q
    |||||||||||||  | ||||||||||||||||| ||| |||| |||| ||||| | || |||    |||||||||||||| ||||||| | |||||| |    
T  54470132 atgaggatgttgcattggatgtgtggtaagactagatgggatatgatttgaaataacaacattagagagagagttggggtagcacctatagtagaaaaga 54470231  T
Q  209 tgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    || || ||| |||||||| |||||||| | || |||||||||||| | || ||||||||||    
T  54470232 tggtggaaactagacttaagtggtttgggcatgtagagagaagacatgtaaattatgtagt 54470292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 262
Target Start/End: Original strand, 50662298 - 50662466
Alignment:
Q  97 aataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt--agagagttggggtaacacc 194  Q
    ||||||| |||| || | |||||||||| |   ||||||||||||||||||||||||||||||| ||||||| |  |||  |||||||| ||| ||||||    
T  50662298 aataagcgtagcggagacgaggatgttgtgtaggatgtgtggtaagactatatgagataggattggaaatgacagcattagagagagtttgggcaacacc 50662397  T
Q  195 tatggcagaaaaaatgatgaaaaatagacttaggtgg-tttgagtatatagagagaagacctttagatt 262  Q
    ||| | |||||| ||| || ||| ||| ||||||||| |||| | || |||||||||||| | ||||||    
T  50662398 tatagtagaaaagatggtggaaagtaggcttaggtggttttgggcatgtagagagaagacttgtagatt 50662466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 10208980 - 10209105
Alignment:
Q  130 gatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggt 229  Q
    ||||||||||||||||| ||| ||||| ||||||||||| || |||||||||||||||||  |||||| | |||||| |||    ||| || |||||| |    
T  10208980 gatgtgtggtaagactagatgggatagaattagaaatgacaacattagagagttggggtagaacctatagtagaaaagatggcagaaactaaacttagtt 10209079  T
Q  230 ggtttgagtatatagagagaagacct 255  Q
    |||||| | || ||| ||||||||||    
T  10209080 ggtttgggcatgtagcgagaagacct 10209105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 20998954 - 20999025
Alignment:
Q  130 gatgtgtggtaagactatatgagataggattagaaatgaaaatattaga----gagttggggtaacacctat 197  Q
    ||||||| ||||||||| | ||||||||||||||||||| |||||||||    |||||||||||||||||||    
T  20998954 gatgtgttgtaagactagacgagataggattagaaatgataatattagatagggagttggggtaacacctat 20999025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 51252799 - 51252674
Alignment:
Q  130 gatgtgtggtaagactatatgagataggattagaaatgaaaatatt--agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttag 227  Q
    ||||||| ||||||||| | |||||||||||||||||||  | |||  |||||||||||||| ||||| | | |||||| ||| || ||| ||| |||||    
T  51252799 gatgtgtcgtaagactagacgagataggattagaaatgactacattagagagagttggggtagcacctctagtagaaaagatggtggaaactaggcttag 51252700  T
Q  228 gtggtttgagtatatagagagaagac 253  Q
    ||||| || | || ||||||||||||    
T  51252699 gtggtatgggcatgtagagagaagac 51252674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 269
Target Start/End: Original strand, 29398718 - 29398903
Alignment:
Q  87 atgaggatgaaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattag----agagt 182  Q
    ||||| || |||||||  |||| || |||||||||||||  | ||| |||||||||| || |||  || |||||| |||||| ||||||||    |||||    
T  29398718 atgagaataaaataagtgtagcggagatgaggatgttgct-tggatttgtggtaagattagatggaattggattacaaatgacaatattagggaaagagt 29398816  T
Q  183 tggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    || | || ||||||||| |||||| ||| || ||||||  |||| |||||||| | || |||||||||||||| |||||| ||||||    
T  29398817 tgcgatagcacctatggtagaaaagatggtggaaaatatgcttatgtggtttgggcatgtagagagaagacctatagattctgtagt 29398903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 41192828 - 41192921
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    |||||||||||||| ||||||  | |||||| ||| || ||| |||||||||||| |||| | || |||||||||||||| |||||| ||||||    
T  41192828 agagagttggggtagcacctacagtagaaaagatggtggaaactagacttaggtgatttgtgcatgtagagagaagacctgtagattctgtagt 41192921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 2588906 - 2588970
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattag 177  Q
    |||||||||||||| | ||||||||||||||||| | | ||||||||||||||||| || |||||    
T  2588906 atgaggatgttgcgttggatgtgtggtaagactagaagggataggattagaaatgacaacattag 2588970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 254
Target Start/End: Complemental strand, 33191213 - 33191060
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacctatggc 200  Q
    ||||||| |||||||||||||||| |||| ||||||||| || ||  ||||||||||| ||||| |  |||    ||||||| |||||| ||||||| |     
T  33191213 tagcagagatgaggatgttgcgctggatgagtggtaagattagataggataggattaggaatgacaccattagagagagagtgggggtagcacctatagt 33191114  T
Q  201 agaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacc 254  Q
    ||||||  || |  ||||||||||||| | ||||| | || |||||||||||||    
T  33191113 agaaaagttggtagaaaatagacttagattgtttgggcatgtagagagaagacc 33191060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 20105828 - 20105761
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagaga 180  Q
    |||| ||||||||| | ||||||||||||||||| | |||||| |||||||||||| || ||||||||    
T  20105828 atgatgatgttgcgatggatgtgtggtaagactagacgagatatgattagaaatgacaacattagaga 20105761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 35555937 - 35555842
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagtta 271  Q
    |||||||| ||||| ||||||| | |||||| ||| |  ||| ||||||||||||||||| | || |||||||||||||| | |||| ||||||||    
T  35555937 agagagttcgggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatttagagagaagacctgtggattctgtagtta 35555842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 269
Target Start/End: Original strand, 3254082 - 3254216
Alignment:
Q  138 gtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtt 233  Q
    |||||| | ||||||||| |||||||||||||||||||    ||| ||||| |||| ||||| | | |||||| |||||| ||||||| |||||||||||    
T  3254082 gtaagaatgtatgagatatgattagaaatgaaaatattaataagaaagttgtggtagcacctttagtagaaaagatgatggaaaatag-cttaggtggtt 3254180  T
Q  234 tgagtatatagagagaagacctttagattatgtagt 269  Q
    ||   |||||| | |||||||| |  ||||||||||    
T  3254181 tggacatatagtgtgaagacctatgaattatgtagt 3254216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 44860771 - 44860833
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatg 167  Q
    |||||||||||||||||||| | | ||||||||||||||||| |||  ||| |||||||||||    
T  44860771 tagcagaaatgaggatgttgtgttggatgtgtggtaagactagatggaataagattagaaatg 44860833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 13805508 - 13805463
Alignment:
Q  223 cttaggtggtttgagtatatagagagaagacctttagattatgtag 268  Q
    ||||||||||||| |||| ||||||||||||||||||||| |||||    
T  13805508 cttaggtggtttgggtatgtagagagaagacctttagattttgtag 13805463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 27991789 - 27991704
Alignment:
Q  96 aaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    |||||||  |||||||||||| ||||||| | | |||||||||||||| || ||||||||| |||| |||| |  |||||||||||    
T  27991789 aaataagtgtagcagaaatgaagatgttgtgttggatgtgtggtaagattagatgagatagaattaaaaataacgatattagagag 27991704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 31339529 - 31339621
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    ||||||||||||||  |||||||| ||||||| || |  ||| ||  ||||||||||||||| || |||||||||||| | |||||||||||||    
T  31339529 agagagttggggtagaacctatggtagaaaaa-tggtcgaaactaagcttaggtggtttgagcatgtagagagaagacttgtagattatgtagt 31339621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 40933253 - 40933188
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattaga 178  Q
    |||||||||||||| |  |||||||||||||| |||   ||||| |||||||||||||||||||||    
T  40933253 atgaggatgttgcgttgaatgtgtggtaagacaatacatgatagaattagaaatgaaaatattaga 40933188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 235
Target Start/End: Original strand, 49987337 - 49987479
Alignment:
Q  97 aataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattaga----gagttggggtaaca 192  Q
    ||||||| ||||||| |||||||||||| | |  |||| | ||||||||| |   ||||||||||||||||| || ||||||    ||||  |||| |||    
T  49987337 aataagcttagcagagatgaggatgttgtgttgaatgtttagtaagactagacatgataggattagaaatgacaacattagatagagagtctgggtcaca 49987436  T
Q  193 cctatggcagaaaaaatgatgaaaaatagacttaggtggtttg 235  Q
    ||||| | |||||| ||| || ||||||| |||||||||||||    
T  49987437 cctatagtagaaaagatggtggaaaataggcttaggtggtttg 49987479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 254
Target Start/End: Complemental strand, 31960179 - 31960026
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaacacctatggc 200  Q
    ||||||| |||||||||||||| | |||| |||||||||||| |   ||||||||||| ||||| |  |||    ||||||| |||||| ||||||| |     
T  31960179 tagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgggggtagcacctatagt 31960080  T
Q  201 agaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacc 254  Q
    ||||||  || |  ||||||| ||||| ||||||| | || |||||||||||||    
T  31960079 agaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 31960026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 197
Target Start/End: Original strand, 45423544 - 45423628
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctat 197  Q
    |||||||||||| | | | ||||||||||||||| | | ||||| ||||||||||| || |||| ||||||| |||| |||||||    
T  45423544 atgaggatgttgtgttggttgtgtggtaagactagacgggatagaattagaaatgacaacattatagagttgaggtagcacctat 45423628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 252
Target Start/End: Original strand, 30807511 - 30807658
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaa 204  Q
    ||||||||| |||||||||||| |  |||||| |||| |||| ||| ||||| ||||| |||||  | || |||||||||  ||| ||| ||| | ||||    
T  30807511 tagcagaaacgaggatgttgcgttgaatgtgtagtaaaactagatgtgatagaattaggaatgacgacataagagagttgatgtagcacatatagtagaa 30807610  T
Q  205 aaaatgatgaaaaatagacttaggtggtttgagtatatagagagaaga 252  Q
    || ||| |  ||| || ||||||||| |||||| | ||||||||||||    
T  30807611 aagatggtagaaactaaacttaggtgatttgagcacatagagagaaga 30807658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 45185357 - 45185306
Alignment:
Q  130 gatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| ||||||||| ||||||||| ||||||||||| || |||||||||    
T  45185357 gatgtgtagtaagactagatgagatagaattagaaatgacaacattagagag 45185306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 252
Target Start/End: Complemental strand, 39100890 - 39100749
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag--ttggggtaacacctatggcagaaaaaatg 210  Q
    |||||||||||||||   ||| |||||||||||| |   ||||||||||| ||||| |  |||||||||  | |||||| ||||||| | ||||||  ||    
T  39100890 atgaggatgttgcgccaaatgagtggtaagactagaaatgataggattaggaatgacaccattagagagagtgggggtagcacctatagaagaaaagttg 39100791  T
Q  211 atgaaaaatagacttaggtggtttgagtatatagagagaaga 252  Q
    ||  ||||||| ||||| ||||||||  || |||||||||||    
T  39100790 atagaaaataggcttagatggtttgaacatgtagagagaaga 39100749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 47611744 - 47611798
Alignment:
Q  201 agaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacct 255  Q
    |||||| |||||| ||||||| ||||||||||||| | || ||||||||||||||    
T  47611744 agaaaagatgatggaaaataggcttaggtggtttgggcatgtagagagaagacct 47611798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 18499784 - 18499841
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagatag 156  Q
    |||||||||||||||||| ||||||| | | |||||||| |||||||| | |||||||    
T  18499784 taagcatagcagaaatgaagatgttgtgttggatgtgtgataagactagacgagatag 18499841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 28497482 - 28497574
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    |||||||||||||| ||||| | | |||||| ||  || |||| || ||||||||||||| | || |||||||||||| | |||||||||||||    
T  28497482 agagagttggggtagcacctttagtagaaaagattgtggaaaa-aggcttaggtggtttgggcatgtagagagaagacttgtagattatgtagt 28497574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 33227126 - 33227167
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagacta 146  Q
    ||||||| |||||||||||||||| |||| ||||||||||||    
T  33227126 tagcagagatgaggatgttgcgctggatgagtggtaagacta 33227167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 12494667 - 12494743
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||||| | |||| |||||||||||| |   ||||||||||| ||||| |  |||||||||    
T  12494667 tagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagag 12494743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 23906666 - 23906590
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||||| | |||| |||| ||||||| |  |||||||||||| ||||| |  |||||||||    
T  23906666 tagcagagatgaggatgttgcgttggatgagtggcaagactagacaagataggattaggaatgacaccattagagag 23906590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 25257828 - 25257792
Alignment:
Q  219 tagacttaggtggtttgagtatatagagagaagacct 255  Q
    ||||||||||||||||||| || ||||||||||||||    
T  25257828 tagacttaggtggtttgagcatgtagagagaagacct 25257792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 43070129 - 43070045
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggta 189  Q
    ||||||| ||||  |||||| | | |||||||||||||| || |   ||||||||||||||||| || |||||||||||| ||||    
T  43070129 tagcagagatgatcatgttgggttggatgtgtggtaagattagacaggataggattagaaatgacaacattagagagttgaggta 43070045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 43433835 - 43433911
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||||| | |||| |||| ||||||| |  |||||||||||| ||||| |  |||||||||    
T  43433835 tagcagagatgaggatgttgcgttggatgagtggcaagactagacaagataggattaggaatgacaccattagagag 43433911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 254
Target Start/End: Complemental strand, 48622906 - 48622755
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag--ttggggtaacacctatggcag 202  Q
    ||||||| |||||||||||||  | |||| |||||||||||| |   ||||||||||| ||||| |  |||||||||  | |||||| |||| || | ||    
T  48622906 tagcagagatgaggatgttgctttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagtgggggtagcacccatagtag 48622807  T
Q  203 aaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacc 254  Q
    ||||  || |  ||||||| ||||| ||||||| | || |||||||||||||    
T  48622806 aaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 48622755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 50680648 - 50680789
Alignment:
Q  97 aataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt----agagagttggggtaaca 192  Q
    |||||| ||||| || | |||||||||| | |  |||||| | |||||||||||| |||||||| ||||| | || |||    |||||||| ||| ||||    
T  50680648 aataagtatagcggagacgaggatgttgtgttgaatgtgtagcaagactatatgacataggattggaaataacaacattagagagagagttagggcaaca 50680747  T
Q  193 cctatggcagaaaaaatgatgaaaaatagacttaggtggttt 234  Q
    ||||| |  ||||| ||| || ||||||| ||||||||||||    
T  50680748 cctatagttgaaaagatggtggaaaataggcttaggtggttt 50680789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 53518571 - 53518531
Alignment:
Q  215 aaaatagacttaggtggtttgagtatatagagagaagacct 255  Q
    ||||||| ||||||||||||| |||| ||||||||||||||    
T  53518571 aaaataggcttaggtggtttgggtatgtagagagaagacct 53518531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 56225097 - 56225133
Alignment:
Q  215 aaaatagacttaggtggtttgagtatatagagagaag 251  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  56225097 aaaataggcttaggtggtttgagtatgtagagagaag 56225133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 56375207 - 56375283
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||||| | |||| |||||||||||| |  ||||| |||||| ||||| |  |||||||||    
T  56375207 tagcagagatgaggatgttgcgttggatgagtggtaagactagacaagataagattaggaatgacaccattagagag 56375283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 262
Target Start/End: Complemental strand, 44245 - 44072
Alignment:
Q  96 aaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaat-------attagagagttggggt 188  Q
    ||||||||  ||| || |||||||||||||| | |||||| |||||||||| |||  |||| |||| |||||| |||       ||||||||||||||||    
T  44245 aaataagcgcagcggagatgaggatgttgcgttggatgtgcggtaagactagatggtatagtattaaaaatgacaattgacaatattagagagttggggt 44146  T
Q  189 aacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagatt 262  Q
    | ||||||| | |||||| |||  | ||||||| ||||||||||||| | || ||||||||||||||| |||||    
T  44145 agcacctatagtagaaaagatggcggaaaataggcttaggtggtttgggcatgtagagagaagaccttcagatt 44072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 255
Target Start/End: Complemental strand, 9579053 - 9578914
Alignment:
Q  118 gatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag--ttggggtaacacctatggcagaaaaaatgatgaa 215  Q
    ||||||||| | |||||||||||||| || ||  ||||| |||| |||||| ||| ||||||||  ||||||| |||| ||| | || ||| |||||| |    
T  9579053 gatgttgcgttggatgtgtggtaagaatagatatgatagaattaaaaatgacaatgttagagagagttggggtgacacatatagtagtaaagatgatgta 9578954  T
Q  216 aaatagacttaggtggtttgagtatatagagagaagacct 255  Q
    ||||||||||||||||||||   || ||||||||||||||    
T  9578953 aaatagacttaggtggtttggacatgtagagagaagacct 9578914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 9647970 - 9647888
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttgggg 187  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||| |||| |||||||||||  || |||| ||||||||||    
T  9647970 tagcagagatgaggatgttgcgttggatgtgtggtaagactagatgtgataagattagaaatgtcaacattatagagttgggg 9647888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 45077656 - 45077727
Alignment:
Q  96 aaataagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatg 167  Q
    ||||||||||||| || |||||||||||||| | ||||||||||||||||| |  |||||| ||||||||||    
T  45077656 aaataagcatagctgagatgaggatgttgcgttggatgtgtggtaagactagactagatagaattagaaatg 45077727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 262
Target Start/End: Original strand, 7825269 - 7825438
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagaga------gttggggtaaca 192  Q
    ||||| ||||||| || ||||||||||| | ||||||||||||||||| |   |||| |||||||||||| | |||||||||      ||||| ||| ||    
T  7825269 taagcgtagcagagattaggatgttgcgttggatgtgtggtaagactagactggatatgattagaaatgacactattagagagagagtgttggagtagca 7825368  T
Q  193 cctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagatt 262  Q
    ||||| |  | ||| ||| |||||||||  ||||| ||||||||| || |||||||||||| | ||||||    
T  7825369 cctatagttgtaaatatggtgaaaaataagcttagttggtttgagcatgtagagagaagacatgtagatt 7825438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 9556724 - 9556582
Alignment:
Q  114 tgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagag----agttggggtaacacctatggcagaaaaaat 209  Q
    ||||||||||| | | |||||||||||||| || | | |||| |||||||||||| || |||||||    |||||||||||||| ||| | || ||||||    
T  9556724 tgaggatgttgtgttggatgtgtggtaagattagacgggatatgattagaaatgacaacattagagagaaagttggggtaacacttatagtag-aaaaat 9556626  T
Q  210 gatgaaaaatagacttaggtggtttgagtatatagagagaagac 253  Q
    | || ||||||| ||||||||||||  | || ||||||||||||    
T  9556625 ggtggaaaataggcttaggtggtttaggcatgtagagagaagac 9556582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 271
Target Start/End: Original strand, 11017268 - 11017401
Alignment:
Q  140 aagactatatgagataggattagaaatgaaaatatt--agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgag 237  Q
    ||||||| |||||||| |||||| ||||||||||||  ||||||||| |||| ||||||| | |||||| ||  || ||| | | |||| |||||||| |    
T  11017268 aagactagatgagataagattaggaatgaaaatattaaagagagttgaggtagcacctatagtagaaaagatcgtggaaactcggcttaagtggtttggg 11017367  T
Q  238 tatatagagagaagacctttagattatgtagtta 271  Q
    ||| | |||||||||||  |||||| ||||||||    
T  11017368 tatgtggagagaagacccgtagattttgtagtta 11017401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 12734626 - 12734750
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt--agagagttggggtaacacctatggcagaaaaaatg 210  Q
    |||||||||||| ||| |||| |||||||||||| | | ||||||||||||||||| |  |||  ||||||| |||||| ||||||| | ||||||| ||    
T  12734626 atgaggatgttgtgctggatgagtggtaagactagacgggataggattagaaatgacaccattagagagagtgggggtagcacctatagtagaaaaattg 12734725  T
Q  211 atgaaaaatagacttaggtggtttg 235  Q
     |  ||||||| ||||| |||||||    
T  12734726 gtagaaaataggcttagatggtttg 12734750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 261
Target Start/End: Original strand, 40759024 - 40759177
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag-----ttggggtaacacctatggcagaaaaa 207  Q
    ||||||||||| | || ||||||  ||||||||| |  ||||| |||||||||||| || |||||||||     ||||| || ||| ||| | |||||||    
T  40759024 atgaggatgtttcactagatgtggtgtaagactagacaagataagattagaaatgacaacattagagagagaggttgggttagcacttatagtagaaaaa 40759123  T
Q  208 atgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagat 261  Q
    ||| || ||| |||| |||||||||||| | || |||||||||||| |||||||    
T  40759124 atggtggaaactagagttaggtggtttgtgcatgtagagagaagacttttagat 40759177  T

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Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 261
Target Start/End: Complemental strand, 41763398 - 41763247
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag---ttggggtaacacctatggcagaaaaaat 209  Q
    |||||||||||||| | |||| |||||||||||| |  |||||||||||| ||||| |  |||||||||    ||||||||||||||| | ||||||  |    
T  41763398 atgaggatgttgcgatggatgagtggtaagactagacaagataggattaggaatgacaccattagagagagagtggggtaacacctatagtagaaaagtt 41763299  T
Q  210 gatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagat 261  Q
    | |  ||||||| |||||||||||||   ||  ||||||||||||| |||||    
T  41763298 ggtagaaaataggcttaggtggtttggacatgcagagagaagacctgtagat 41763247  T

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Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 250
Target Start/End: Original strand, 41330062 - 41330195
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaaaaaatgat 212  Q
    |||| ||||||| | | |||||||||||| ||||| |  |||| |||||||||| ||    ||||||||||| |||||||||| | | |||||| |||||    
T  41330062 atgatgatgttgtgttggatgtgtggtaaaactatgtaggatatgattagaaataaa----ttagagagttgaggtaacacctttagtagaaaagatgat 41330157  T
Q  213 gaaaaatagacttaggtggtttgagtatatagagagaa 250  Q
     |||||||| ||||| ||||||||  || |||||||||    
T  41330158 caaaaataggcttagatggtttgaacatgtagagagaa 41330195  T

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Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 44411650 - 44411762
Alignment:
Q  122 ttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagagttggggtaacacctatggcagaaaaaatgatgaaaaatag 221  Q
    ||||| ||||||||| ||||||||| |||||||| ||||| |||||| || ||||||||||||  ||| ||||||| | || ||| ||| || |||||||    
T  44411650 ttgcgtttgatgtgttgtaagactagatgagatatgattacaaatgacaacattagagagttgaagtagcacctatagtaggaaagatggtggaaaatag 44411749  T
Q  222 acttaggtggttt 234  Q
     |||  |||||||    
T  44411750 gcttccgtggttt 44411762  T

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Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 37393502 - 37393455
Alignment:
Q  134 tgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  37393502 tgtggtaagactagatgagatatgatcagaaatgaaaatattagagag 37393455  T

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Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 11412713 - 11412806
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    |||||||||||||| ||||||| | |||||| ||| || ||||||| ||||||| ||||| | || |||||| |||| || |||||| ||||||    
T  11412713 agagagttggggtagcacctatagtagaaaatatggtggaaaataggcttaggttgtttgggcatttagagataagaactgtagattctgtagt 11412806  T

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Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 269
Target Start/End: Complemental strand, 43752237 - 43752144
Alignment:
Q  176 agagagttggggtaacacctatggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    |||||||||||||| ||||||| | ||||||  || |  ||||||| |||||||| ||||   || |||||||||||||| |||||||||||||    
T  43752237 agagagttggggtagcacctatagtagaaaaggtggtagaaaataggcttaggtgatttggacatgtagagagaagacctatagattatgtagt 43752144  T

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Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 16097347 - 16097292
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatga 168  Q
    ||||||||||||| || |||| |||||||||||| ||| |||| ||||||||||||    
T  16097347 atgaggatgttgcactggatgagtggtaagactagatgggatatgattagaaatga 16097292  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 4598934 - 4598888
Alignment:
Q  100 aagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagacta 146  Q
    |||| |||||||||||| ||||||||| | |||||||||||||||||    
T  4598934 aagcgtagcagaaatgatgatgttgcgttggatgtgtggtaagacta 4598888  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 41779573 - 41779515
Alignment:
Q  201 agaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttag 259  Q
    |||||||||| || ||| | ||||||||||||||||  || ||||||||||||||||||    
T  41779573 agaaaaaatggtggaaactcgacttaggtggtttgatcatgtagagagaagacctttag 41779515  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 269
Target Start/End: Complemental strand, 23714629 - 23714458
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattag--agagttggggtaacaccta 196  Q
    ||||||||||||| || || |||||| | | ||||||||||||||||| |  | ||||||||| ||||||  | |||||  |||||| ||||| ||| ||    
T  23714629 taagcatagcagagattagaatgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgacgacattagatagagtt-gggtagcacata 23714531  T
Q  197 tggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    | | |||||| ||| || ||| |||||||| || ||||  | || |||||||||||| | | |||||||||||    
T  23714530 tagtagaaaagatggtggaaactagacttatgtagtttaggcatgtagagagaagacttgtggattatgtagt 23714458  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 269
Target Start/End: Complemental strand, 24102301 - 24102130
Alignment:
Q  99 taagcatagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattag--agagttggggtaacaccta 196  Q
    ||||||||||||| || || |||||| | | ||||||||||||||||| |  | ||||||||| ||||||  | |||||  |||||| ||||| ||| ||    
T  24102301 taagcatagcagagattagaatgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgacgacattagatagagtt-gggtagcacata 24102203  T
Q  197 tggcagaaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacctttagattatgtagt 269  Q
    | | |||||| ||| || ||| |||||||| || ||||  | || |||||||||||| | | |||||||||||    
T  24102202 tagtagaaaagatggtggaaactagacttatgtagtttaggcatgtagagagaagacttgtggattatgtagt 24102130  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 254
Target Start/End: Complemental strand, 3244016 - 3243865
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatatt--agagagttggggtaacacctatggcag 202  Q
    ||||||| || ||||||||||| | |||| || ||||||||| |   ||||||||||  ||||| |  |||  ||||||| |||||| ||||||| | |     
T  3244016 tagcagagataaggatgttgcgttggatgagtagtaagactacacatgataggattatgaatgacaccattagagagagtgggggtagcacctatagtaa 3243917  T
Q  203 aaaaaatgatgaaaaatagacttaggtggtttgagtatatagagagaagacc 254  Q
    ||||  ||||| ||||||| ||||| ||||||| | || |||||||||||||    
T  3243916 aaaagttgatggaaaataggcttagatggtttgggaatgtagagagaagacc 3243865  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 21834495 - 21834531
Alignment:
Q  130 gatgtgtggtaagactatatgagataggattagaaat 166  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  21834495 gatgtgtggtaagactagatgagataagattagaaat 21834531  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 36183368 - 36183444
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||||||||||||| | |||| |||||||||||| |   ||||||||||| ||||| |  |||||||||    
T  36183368 tagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacacaattagagag 36183444  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 253
Target Start/End: Original strand, 38434876 - 38435021
Alignment:
Q  113 atgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag----ttggggtaacacctatggcagaaaaaa 208  Q
    |||||||||||||  | |||| ||||||| |||| | |||| | |||||||||||| || |||||||||    |||||||| ||||||| | |||||| |    
T  38434876 atgaggatgttgcattggatgcgtggtaaaactagacgagagaagattagaaatgacaacattagagagagaattggggtagcacctatagtagaaaaga 38434975  T
Q  209 tgatgaaaaatagac-ttaggtggtttgagtatatagagagaagac 253  Q
    || || ||| ||||| || ||||||||| | || || |||||||||    
T  38434976 tggtggaaactagactttgggtggtttgggcatgtaaagagaagac 38435021  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 42092436 - 42092512
Alignment:
Q  105 tagcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagataggattagaaatgaaaatattagagag 181  Q
    ||||||| |||| ||||||||  | ||||||| ||||||||| | | |||| |||||||||||| ||| ||||||||    
T  42092436 tagcagagatgatgatgttgcattggatgtgtagtaagactagacgggatatgattagaaatgacaatgttagagag 42092512  T

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