View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11278_high_14 (Length: 607)
Name: NF11278_high_14
Description: NF11278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11278_high_14 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 276; Significance: 1e-154; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 168 - 558
Target Start/End: Original strand, 5739087 - 5739476
Alignment:
| Q |
168 |
ttgataaacatagctagctccttctcttttaatcttctttcttctaaatttattgatcttcgcaagctcatcttgaaatttacaaaatatatttcttgta |
267 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
5739087 |
ttgataaacatagctagctccttctcttttaatcttcttttttctaaatttattgatcttcgcaagctcatcgtgaaatttacaaaatatatttcttgta |
5739186 |
T |
 |
| Q |
268 |
tagatagatccaacatgcacctcaagttctgaccatgttgtatacctccgagttttatgcttactttcataatcctctcttttttctaccgctaagcggc |
367 |
Q |
| |
|
|||||||||||| ||||||||||||||| ||| ||||||||| |||| |||| | |||||||| ||||||||||||||||||||||| || |||||||| |
|
|
| T |
5739187 |
tagatagatccatcatgcacctcaagttttga-catgttgtaaacctgcgagatgtatgcttattttcataatcctctcttttttctgcctgtaagcggc |
5739285 |
T |
 |
| Q |
368 |
tatcaagcgcctttttcaaattttaacacaaattcttgcaattttgttgaagcatttacaaaagaatc-aaaaaatgaattaatgctttcacttctttga |
466 |
Q |
| |
|
||||||| ||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
5739286 |
tatcaagagcc-ttttcaaattttaatacaaattcttgcaatgttgttgaagcatttacaaaagaatcaaaaaaatgaattaaagctttcacttctttga |
5739384 |
T |
 |
| Q |
467 |
gttgtattcatcccaacaaaaaattcacttctattataaaccggtatccatgatgctctgatactatataacccttgaagccattcattgtt |
558 |
Q |
| |
|
||| |||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5739385 |
attgcattcattccagcaaaaaaatcacttctattataaaccggtatcaatgattctctgatactatataacccttgaagccattcattgtt |
5739476 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 168 - 558
Target Start/End: Original strand, 5776199 - 5776588
Alignment:
| Q |
168 |
ttgataaacatagctagctccttctcttttaatcttctttcttctaaatttattgatcttcgcaagctcatcttgaaatttacaaaatatatttcttgta |
267 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
5776199 |
ttgataaacatagctagctccttctcttttaatcttcttttttctaaatttattgatcttcgcaagctcatcgtgaaatttacaaaatatatttcttgta |
5776298 |
T |
 |
| Q |
268 |
tagatagatccaacatgcacctcaagttctgaccatgttgtatacctccgagttttatgcttactttcataatcctctcttttttctaccgctaagcggc |
367 |
Q |
| |
|
|||||||||||| ||||||||||||||| ||| ||||||||| |||| |||| | |||||||| ||||||||||||||||||||||| || |||||||| |
|
|
| T |
5776299 |
tagatagatccatcatgcacctcaagttttga-catgttgtaaacctgcgagatgtatgcttattttcataatcctctcttttttctgcctgtaagcggc |
5776397 |
T |
 |
| Q |
368 |
tatcaagcgcctttttcaaattttaacacaaattcttgcaattttgttgaagcatttacaaaagaatc-aaaaaatgaattaatgctttcacttctttga |
466 |
Q |
| |
|
||||||| ||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
5776398 |
tatcaagagcc-ttttcaaattttaatacaaattcttgcaatgttgttgaagcatttacaaaagaatcaaaaaaatgaattaaagctttcacttctttga |
5776496 |
T |
 |
| Q |
467 |
gttgtattcatcccaacaaaaaattcacttctattataaaccggtatccatgatgctctgatactatataacccttgaagccattcattgtt |
558 |
Q |
| |
|
||| |||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5776497 |
attgcattcattccagcaaaaaaatcacttctattataaaccggtatcaatgattctctgatactatataacccttgaagccattcattgtt |
5776588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 19 - 558
Target Start/End: Original strand, 15271627 - 15272165
Alignment:
| Q |
19 |
tgagtgacaccttttgcttgcaatattaccaatatatgtctgcacaatatccccaaatattcaaacagttgacatccacatttagcaatctttgtgtcta |
118 |
Q |
| |
|
||||||| ||||||| |||| || ||||| | |||||| |||||||||||||||||| | ||| | | ||||||||||||||| ||||||| || ||| | |
|
|
| T |
15271627 |
tgagtgatacctttttcttgaaaaattactagtatatgcctgcacaatatccccaaaaactcatataattgacatccacattttgcaatctgtgcgtcca |
15271726 |
T |
 |
| Q |
119 |
aatttatatcaacaacatacatgtctcgagcatcatattcactatacacttgataaacatagctagctccttctcttttaatcttctttcttctaaattt |
218 |
Q |
| |
|
||||||||||||| | | |||| |||||||||| || | ||| | |||||||| |||||| || ||| ||| | ||||||||||| || ||||||| |
|
|
| T |
15271727 |
aatttatatcaacgaaaaacatatctcgagcattgtagttactggaaacttgatagacatagttatgtccatctttgctaatcttcttttttttaaattt |
15271826 |
T |
 |
| Q |
219 |
attgatcttcgcaagctcatcttgaaatttacaaaatatatttcttgtatagatagatccaacatgcacctcaagttctgaccatgttgtatacctccga |
318 |
Q |
| |
|
| ||||||| | ||||||||||||||||| ||| || ||||| | ||| ||||| || ||||| ||||||||| ||||| ||| | | | || |
|
|
| T |
15271827 |
gtagatcttcctgatctcatcttgaaatttaccaaaaatgtttctcgaataaatagacgcagcatgctcctcaagttttgaccctgtagccaaaatgcgt |
15271926 |
T |
 |
| Q |
319 |
gttttatgcttactttcataatcctctcttttttctaccgctaagcggctatcaagcgcctttttcaaattttaacacaaattcttgcaattttgttgaa |
418 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||||||| |||| || |
|
|
| T |
15271927 |
tttttatgcctactttcataatcctctcttttttctacttctaagcggctatcaaccgcctttt-caaatttcaacacaaattcttgcaatgttgtagat |
15272025 |
T |
 |
| Q |
419 |
gcatttacaaaagaatcaaaaaatgaattaatgctttcacttctttgagttgtattcatcccaacaaaaaattcacttctattataaaccggtatccatg |
518 |
Q |
| |
|
||||| ||||||||||||||||| | ||| ||||| |||||||||||| |||||||||||||| ||||||| |||||||||||||| |||||||| | |
|
|
| T |
15272026 |
gcattcacaaaagaatcaaaaaacgcattgatgctctcacttctttgacttgtattcatcccagcaaaaaaacagcttctattataaactggtatccaag |
15272125 |
T |
 |
| Q |
519 |
atgctctgatactatataacccttgaagccattcattgtt |
558 |
Q |
| |
|
|| |||| || |||||||||||||||||||||||||||| |
|
|
| T |
15272126 |
attctctaattttatataacccttgaagccattcattgtt |
15272165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 19 - 558
Target Start/End: Complemental strand, 40875399 - 40874860
Alignment:
| Q |
19 |
tgagtgacaccttttgcttgcaatattaccaatatatgtctgcacaatatccccaaatat-tcaaacagttgacatccacatttagcaatctttgtgtct |
117 |
Q |
| |
|
||||||| ||||||| |||| || ||||| | |||||| || ||||||||||||||| | ||| | | ||||||||||||||| ||||||| || ||| |
|
|
| T |
40875399 |
tgagtgatacctttttcttgaaaaattactagtatatgcctacacaatatccccaaaaaactcatataattgacatccacattttgcaatctgtgcgtcc |
40875300 |
T |
 |
| Q |
118 |
aaatttatatcaacaacatacatgtctcgagcatcatattcactatacacttgataaacatagctagctccttctcttttaatcttctttcttctaaatt |
217 |
Q |
| |
|
|||||||||||||| | | |||| |||||||||| || | ||| | ||||||| |||||| || ||| ||| | ||||||||||| || ||||| |
|
|
| T |
40875299 |
aaatttatatcaacgaaaaacatatctcgagcattgtagttactggaaacttgatcgacatagttatgtccatctttgctaatcttctttttttaaaatt |
40875200 |
T |
 |
| Q |
218 |
tattgatcttcgcaagctcatcttgaaatttacaaaatatatttcttgtatagatagatccaacatgcacctcaagttctgaccatgttgtatacctccg |
317 |
Q |
| |
|
| | ||||||| | ||||||||||||||||| ||| || ||||| | ||| ||||| || ||||| ||||||||| ||||| ||| | | | || |
|
|
| T |
40875199 |
tgtagatcttcctgatctcatcttgaaatttaccaaaaatgtttctcgaataaatagacgcagcatgctcctcaagttttgaccctgtagccaaaatgcg |
40875100 |
T |
 |
| Q |
318 |
agttttatgcttactttcataatcctctcttttttctaccgctaagcggctatcaagcgcctttttcaaattttaacacaaattcttgcaattttgttga |
417 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||||||| ||||||| |
|
|
| T |
40875099 |
ttttttatgcctactttcataatcctctcttttttctacttctaagcggctatcaaccgcctttt-caaatttcaacacaaattcttgcaatgttgttga |
40875001 |
T |
 |
| Q |
418 |
agcatttacaaaagaatcaaaaaatgaattaatgctttcacttctttgagttgtattcatcccaacaaaaaattcacttctattataaaccggtatccat |
517 |
Q |
| |
|
||||| ||||||||||||||||| | ||| ||||| |||||||||||| |||||||||||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
40875000 |
tgcattcacaaaagaatcaaaaaacgcattgatgctctcacttctttgacttgtattcatcccagcaaaaaaacagcttctattataaactggtatccaa |
40874901 |
T |
 |
| Q |
518 |
gatgctctgatactatataacccttgaagccattcattgtt |
558 |
Q |
| |
|
||| |||| || |||||||||||||||||||||||||||| |
|
|
| T |
40874900 |
gattctctaattttatataacccttgaagccattcattgtt |
40874860 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 14403864 - 14403926
Alignment:
| Q |
19 |
tgagtgacaccttttgcttgcaatattaccaatatatgtctgcacaatatccccaaatattca |
81 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
14403864 |
tgagtgacaccttttgcttgtaatattaccaatatatttctgcacaatatccccaaatattca |
14403926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 425 - 551
Target Start/End: Original strand, 7775387 - 7775513
Alignment:
| Q |
425 |
acaaaagaatcaaaaaatgaattaatgctttcacttctttgagttgtattcatcccaacaaaaaattcacttctattataaaccggtatccatgatgctc |
524 |
Q |
| |
|
||||| ||||||||||| | ||||||||| ||||||||||| || || ||||||||| ||||||| |||||| ||||||| |||| |||||| ||| |
|
|
| T |
7775387 |
acaaacgaatcaaaaaaagcattaatgctctcacttctttgtgtagtgttcatcccagcaaaaaaagtacttctgttataaataggtacccatgactctc |
7775486 |
T |
 |
| Q |
525 |
tgatactatataacccttgaagccatt |
551 |
Q |
| |
|
| || |||| || ||||||||||||| |
|
|
| T |
7775487 |
ttattttatacaaaccttgaagccatt |
7775513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 14404157 - 14404204
Alignment:
| Q |
134 |
catacatgtctcgagcatcatattcactatacacttgataaacatagc |
181 |
Q |
| |
|
||||||| ||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
14404157 |
catacatatctcgagaatcatattcactaggcacttgataaacatagc |
14404204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 188; Significance: 1e-101; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 23 - 295
Target Start/End: Complemental strand, 17538160 - 17537891
Alignment:
| Q |
23 |
tgacaccttttgcttgcaatattaccaatatatgtctgcacaatatccccaaatattcaaacagttgacatccacatttagcaatctttgtgtctaaatt |
122 |
Q |
| |
|
|||||||||||||||||| |||||| || ||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
17538160 |
tgacaccttttgcttgca---ttaccagtaaatgtctgcaaaatatcgccaaatattcaaacagttgacatccacatttacaaatctttgtgtctaaatt |
17538064 |
T |
 |
| Q |
123 |
tatatcaacaacatacatgtctcgagcatcatattcactatacacttga-taaacatagctagctccttctcttttaatcttctttcttctaaatttatt |
221 |
Q |
| |
|
|||| ||||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
17538063 |
tata-caacaacatgcatatctcgagcatcatattcactagacacttgaataaacatagctagctccttctcttttaatcttctttcttctaagcttatt |
17537965 |
T |
 |
| Q |
222 |
gatcttcgcaagctcatcttgaaatttacaaaatatatttcttgtatagatagatccaacatgcacctcaagtt |
295 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
17537964 |
gatcttcgcaagctcgtcttgaaatttacaaaataaatttcttgtatagatagatccaacacgcacctcaagtt |
17537891 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 19 - 558
Target Start/End: Original strand, 13222799 - 13223337
Alignment:
| Q |
19 |
tgagtgacaccttttgcttgcaatattaccaatatatgtctgcacaatatccccaaatattcaaacagttgacatccacatttagcaatctttgtgtcta |
118 |
Q |
| |
|
||||||| ||||||| |||| || ||||| | |||||| |||||||||||||||||| | ||| | | ||||||||||||||| ||||||| || ||| | |
|
|
| T |
13222799 |
tgagtgatacctttttcttgaaaaattactagtatatgcctgcacaatatccccaaaaactcatataattgacatccacattttgcaatctgtgcgtcca |
13222898 |
T |
 |
| Q |
119 |
aatttatatcaacaacatacatgtctcgagcatcatattcactatacacttgataaacatagctagctccttctcttttaatcttctttcttctaaattt |
218 |
Q |
| |
|
||||||||||||| | | |||| |||||||||| || | ||| | |||||||| |||||| || ||| ||| | ||||||||||| || ||||||| |
|
|
| T |
13222899 |
aatttatatcaacgaaaaacatatctcgagcattgtagttactggaaacttgatagacatagttatgtccatctttgctaatcttcttttttttaaattt |
13222998 |
T |
 |
| Q |
219 |
attgatcttcgcaagctcatcttgaaatttacaaaatatatttcttgtatagatagatccaacatgcacctcaagttctgaccatgttgtatacctccga |
318 |
Q |
| |
|
| ||||||| | ||||||||||||||||| ||| || ||||| | ||| ||||| || ||||| ||||||||| ||||| ||| | | | || |
|
|
| T |
13222999 |
gtagatcttcctgatctcatcttgaaatttaccaaaaatgtttctcgaataaatagacgcagcatgctcctcaagttttgaccctgtagccaaaatgcgt |
13223098 |
T |
 |
| Q |
319 |
gttttatgcttactttcataatcctctcttttttctaccgctaagcggctatcaagcgcctttttcaaattttaacacaaattcttgcaattttgttgaa |
418 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||||||| |||| || |
|
|
| T |
13223099 |
tttttatgcctactttcataatcctctcttttttctacttctaagcggctatcaaccgcctttt-caaatttcaacacaaattcttgcaatgttgtagat |
13223197 |
T |
 |
| Q |
419 |
gcatttacaaaagaatcaaaaaatgaattaatgctttcacttctttgagttgtattcatcccaacaaaaaattcacttctattataaaccggtatccatg |
518 |
Q |
| |
|
||||| ||||||||||||||||| | ||| ||||| |||||||||||| |||||||||||||| ||||||| |||||||||||||| |||||||| | |
|
|
| T |
13223198 |
gcattcacaaaagaatcaaaaaacgcattgatgctctcacttctttgacttgtattcatcccagcaaaaaaacagcttctattataaactggtatccaag |
13223297 |
T |
 |
| Q |
519 |
atgctctgatactatataacccttgaagccattcattgtt |
558 |
Q |
| |
|
|| |||| || |||||||||||||||||||||||||||| |
|
|
| T |
13223298 |
attctctaattttatataacccttgaagccattcattgtt |
13223337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 197 - 558
Target Start/End: Complemental strand, 11327050 - 11326690
Alignment:
| Q |
197 |
taatcttctttcttctaaatttattgatcttcgcaagctcatcttgaaatttacaaaatatatttcttgtatagatagatccaacatgcacctcaagttc |
296 |
Q |
| |
|
||||||||||| || ||||||| | ||||||| | ||||||||||||||||| ||| || ||||| | ||| ||||| || ||||| ||||||||| |
|
|
| T |
11327050 |
taatcttcttttttttaaatttgtagatcttcctgatctcatcttgaaatttaccaaaaatgtttctcgaataaatagacgcagcatgctcctcaagttt |
11326951 |
T |
 |
| Q |
297 |
tgaccatgttgtatacctccgagttttatgcttactttcataatcctctcttttttctaccgctaagcggctatcaagcgcctttttcaaattttaacac |
396 |
Q |
| |
|
||||| ||| | | | || |||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| ||||| |
|
|
| T |
11326950 |
tgaccctgtagccaaaatgcgttttttatgcctactttcataatcctctcttttttctacttctaagcggctatcaaccgcctttt-caaatttcaacac |
11326852 |
T |
 |
| Q |
397 |
aaattcttgcaattttgttgaagcatttacaaaagaatcaaaaaatgaattaatgctttcacttctttgagttgtattcatcccaacaaaaaattcactt |
496 |
Q |
| |
|
||||||||||||| |||| || ||||| ||||||||||||||||| | ||| ||||| |||||||||||| |||||||||||||| ||||||| ||| |
|
|
| T |
11326851 |
aaattcttgcaatgttgtagatgcattcacaaaagaatcaaaaaacgcattgatgctctcacttctttgacttgtattcatcccagcaaaaaaacagctt |
11326752 |
T |
 |
| Q |
497 |
ctattataaaccggtatccatgatgctctgatactatataacccttgaagccattcattgtt |
558 |
Q |
| |
|
||||||||||| |||||||| ||| |||| || |||||||||||||||||||||||||||| |
|
|
| T |
11326751 |
ctattataaactggtatccaagattctctaattttatataacccttgaagccattcattgtt |
11326690 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 291 - 404
Target Start/End: Complemental strand, 17537641 - 17537529
Alignment:
| Q |
291 |
aagttctgaccatgttgtatacctccgagttttatgcttactttcataatcctctcttttttctaccgctaagcggctatcaagcgcctttttcaaattt |
390 |
Q |
| |
|
||||| ||||||||||||| || | ||| |||||| ||||||||| ||||||||||||||||| || |||||||||||||||||| |||||||||||| |
|
|
| T |
17537641 |
aagttttgaccatgttgtaaacgtgtgagatttatggttactttcacaatcctctcttttttctgcctctaagcggctatcaagcg-ctttttcaaattg |
17537543 |
T |
 |
| Q |
391 |
taacacaaattctt |
404 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
17537542 |
taacacaaattctt |
17537529 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 442 - 558
Target Start/End: Complemental strand, 23899296 - 23899180
Alignment:
| Q |
442 |
tgaattaatgctttcacttctttgagttgtattcatcccaacaaaaaattcacttctattataaaccggtatccatgatgctctgatactatataaccct |
541 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||| | |
|
|
| T |
23899296 |
tgaattaatgctttcacttctttgaattgcattcatcccagcaaaaaaatcacttctattataaaccggtatcaatgattctctgatactatataacctt |
23899197 |
T |
 |
| Q |
542 |
tgaagccattcattgtt |
558 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
23899196 |
tgaagccattcattgtt |
23899180 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 551
Target Start/End: Complemental strand, 52410373 - 52410202
Alignment:
| Q |
380 |
ttttcaaattttaacacaaattcttgcaattttgttgaagcatttacaaaagaatcaaaaaatgaattaatgctttcacttctttgagttgtattcatcc |
479 |
Q |
| |
|
||||||||||| | ||||| ||||| | | | ||||| | ||| ||||| ||||||||||| | ||||||||| ||||||||||| || || ||||||| |
|
|
| T |
52410373 |
ttttcaaatttcactacaaaatcttgtagtatagttgacgaattaacaaatgaatcaaaaaaagcattaatgctctcacttctttgtgtagtgttcatcc |
52410274 |
T |
 |
| Q |
480 |
caacaaaaaattcacttctattataaaccggtatccatgatgctctgatactatataacccttgaagccatt |
551 |
Q |
| |
|
|| ||||||| |||||| ||||||| |||| |||||| |||| || |||| || ||||||||||||| |
|
|
| T |
52410273 |
cagcaaaaaaagtacttctgttataaataggtacccatgactctcttattttatacaaaccttgaagccatt |
52410202 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 555
Target Start/End: Original strand, 46186355 - 46186416
Alignment:
| Q |
494 |
cttctattataaaccggtatccatgatgctctgatactatataacccttgaagccattcatt |
555 |
Q |
| |
|
||||||||||||| |||||||||||| |||| || | |||||||||||||||||| |||| |
|
|
| T |
46186355 |
cttctattataaattggtatccatgattctctaatcttgtataacccttgaagccatacatt |
46186416 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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