View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11278_high_80 (Length: 338)

Name: NF11278_high_80
Description: NF11278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11278_high_80
NF11278_high_80
[»] chr1 (41 HSPs)
chr1 (8-127)||(7371484-7371603)
chr1 (51-121)||(20760863-20760933)
chr1 (51-116)||(17189209-17189274)
chr1 (53-116)||(8898520-8898583)
chr1 (51-116)||(17188957-17189022)
chr1 (53-116)||(30326499-30326562)
chr1 (51-116)||(31050953-31051018)
chr1 (51-116)||(32558465-32558530)
chr1 (51-116)||(37929421-37929486)
chr1 (51-116)||(40714447-40714512)
chr1 (51-116)||(40714801-40714866)
chr1 (51-116)||(45750200-45750265)
chr1 (51-116)||(49955350-49955415)
chr1 (60-116)||(31058424-31058480)
chr1 (51-118)||(35040972-35041039)
chr1 (51-116)||(12906017-12906082)
chr1 (51-116)||(24905170-24905235)
chr1 (51-116)||(28011697-28011762)
chr1 (51-116)||(49955705-49955770)
chr1 (60-116)||(8898884-8898940)
chr1 (68-116)||(25885368-25885416)
chr1 (51-119)||(31514646-31514714)
chr1 (8-54)||(8898703-8898749)
chr1 (8-54)||(28324990-28325036)
chr1 (8-54)||(35038641-35038687)
chr1 (8-54)||(40714630-40714676)
chr1 (67-116)||(28325177-28325226)
chr1 (51-116)||(45749845-45749910)
chr1 (60-120)||(7371289-7371349)
chr1 (14-54)||(49955533-49955573)
chr1 (8-54)||(31058251-31058297)
chr1 (75-116)||(25884704-25884745)
chr1 (51-112)||(33442601-33442662)
chr1 (51-112)||(33442923-33442984)
chr1 (71-116)||(44523516-44523561)
chr1 (8-54)||(45750036-45750082)
chr1 (51-120)||(4716467-4716536)
chr1 (51-112)||(52134075-52134136)
chr1 (51-112)||(52134397-52134458)
chr1 (14-54)||(30326696-30326736)
chr1 (72-120)||(35038454-35038502)
[»] chr4 (68 HSPs)
chr4 (51-120)||(22717938-22718007)
chr4 (51-116)||(22987209-22987274)
chr4 (51-116)||(27069268-27069333)
chr4 (51-119)||(45463431-45463499)
chr4 (51-121)||(11523947-11524017)
chr4 (51-116)||(45463076-45463141)
chr4 (51-116)||(54858563-54858628)
chr4 (51-116)||(3032585-3032650)
chr4 (51-116)||(10408247-10408312)
chr4 (51-116)||(27149354-27149418)
chr4 (51-116)||(51859764-51859829)
chr4 (68-120)||(39701284-39701336)
chr4 (53-116)||(27891587-27891650)
chr4 (50-116)||(50504182-50504248)
chr4 (51-116)||(10407892-10407957)
chr4 (51-116)||(22567115-22567180)
chr4 (51-116)||(27068913-27068978)
chr4 (51-116)||(39666773-39666838)
chr4 (51-116)||(52573231-52573296)
chr4 (51-116)||(52573586-52573651)
chr4 (51-116)||(54858918-54858983)
chr4 (51-119)||(5818133-5818201)
chr4 (51-119)||(6237180-6237248)
chr4 (60-116)||(16605605-16605661)
chr4 (8-54)||(3032776-3032822)
chr4 (8-54)||(10408083-10408129)
chr4 (8-54)||(22718133-22718179)
chr4 (8-54)||(22987037-22987083)
chr4 (8-54)||(39701095-39701141)
chr4 (8-54)||(51859593-51859639)
chr4 (51-116)||(9400522-9400587)
chr4 (51-108)||(22923149-22923206)
chr4 (51-108)||(22927802-22927859)
chr4 (51-108)||(22984081-22984138)
chr4 (51-108)||(22997669-22997726)
chr4 (52-116)||(4982729-4982793)
chr4 (51-111)||(27934847-27934907)
chr4 (51-117)||(9144768-9144834)
chr4 (8-54)||(27069096-27069142)
chr4 (8-54)||(27891770-27891816)
chr4 (8-54)||(39666970-39667016)
chr4 (8-54)||(45463267-45463313)
chr4 (8-54)||(52573414-52573460)
chr4 (51-116)||(9400848-9400913)
chr4 (51-108)||(22718297-22718354)
chr4 (51-108)||(22986862-22986919)
chr4 (51-116)||(27934535-27934600)
chr4 (51-112)||(34837081-34837142)
chr4 (51-112)||(34837403-34837464)
chr4 (51-112)||(38012499-38012560)
chr4 (51-112)||(42738360-42738421)
chr4 (51-112)||(51203616-51203677)
chr4 (68-120)||(6236830-6236882)
chr4 (8-46)||(9731406-9731444)
chr4 (60-110)||(10203630-10203680)
chr4 (51-117)||(39667134-39667200)
chr4 (8-54)||(50504019-50504065)
chr4 (20-54)||(54858746-54858780)
chr4 (51-116)||(4983055-4983120)
chr4 (51-112)||(9145095-9145156)
chr4 (13-46)||(30642359-30642392)
chr4 (51-112)||(32950149-32950210)
chr4 (51-112)||(32950471-32950532)
chr4 (51-100)||(33247293-33247342)
chr4 (51-112)||(38012177-38012238)
chr4 (51-112)||(42738038-42738099)
chr4 (51-119)||(33247602-33247670)
chr4 (68-116)||(50503828-50503876)
[»] chr2 (27 HSPs)
chr2 (51-116)||(11830367-11830432)
chr2 (60-120)||(8342546-8342606)
chr2 (51-116)||(28226102-28226167)
chr2 (53-116)||(41588418-41588481)
chr2 (51-120)||(8342186-8342255)
chr2 (51-116)||(8710826-8710891)
chr2 (51-116)||(15604342-15604407)
chr2 (51-120)||(15604697-15604766)
chr2 (52-120)||(6573046-6573114)
chr2 (51-116)||(14900499-14900564)
chr2 (51-112)||(33740032-33740093)
chr2 (8-46)||(8710662-8710700)
chr2 (8-54)||(15604533-15604579)
chr2 (51-112)||(1695747-1695808)
chr2 (51-116)||(6573546-6573611)
chr2 (51-112)||(13995680-13995741)
chr2 (51-112)||(13996002-13996063)
chr2 (51-116)||(14900810-14900875)
chr2 (51-112)||(33062057-33062118)
chr2 (51-112)||(33062379-33062440)
chr2 (51-112)||(33739710-33739771)
chr2 (51-120)||(41248558-41248627)
chr2 (8-54)||(41587420-41587466)
chr2 (51-105)||(44714121-44714175)
chr2 (51-112)||(1696069-1696130)
chr2 (51-112)||(41248888-41248949)
chr2 (51-116)||(41587238-41587302)
[»] chr7 (43 HSPs)
chr7 (51-120)||(28890578-28890647)
chr7 (51-117)||(32068098-32068164)
chr7 (54-120)||(46204420-46204486)
chr7 (51-116)||(32934706-32934771)
chr7 (51-120)||(42618269-42618338)
chr7 (51-116)||(25453131-25453196)
chr7 (51-120)||(32934347-32934416)
chr7 (51-116)||(42617914-42617979)
chr7 (51-119)||(10600307-10600375)
chr7 (53-116)||(43266626-43266689)
chr7 (51-117)||(25628480-25628546)
chr7 (51-116)||(23058432-23058497)
chr7 (51-116)||(27138299-27138364)
chr7 (51-116)||(32068454-32068519)
chr7 (51-116)||(33828332-33828397)
chr7 (51-120)||(39274869-39274938)
chr7 (51-116)||(43266269-43266334)
chr7 (51-114)||(10600031-10600094)
chr7 (8-54)||(10600143-10600189)
chr7 (8-54)||(22081745-22081791)
chr7 (8-54)||(25453322-25453368)
chr7 (8-54)||(43266452-43266498)
chr7 (8-54)||(46205503-46205549)
chr7 (51-116)||(22081917-22081982)
chr7 (51-120)||(25453486-25453555)
chr7 (51-116)||(25628836-25628901)
chr7 (51-116)||(32680598-32680663)
chr7 (68-116)||(22081563-22081611)
chr7 (51-110)||(18087698-18087757)
chr7 (8-54)||(25628664-25628710)
chr7 (8-54)||(32068290-32068336)
chr7 (8-54)||(32934542-32934588)
chr7 (82-120)||(41899236-41899274)
chr7 (8-54)||(42618105-42618151)
chr7 (71-116)||(23058807-23058852)
chr7 (51-112)||(30948489-30948550)
chr7 (51-116)||(32680924-32680989)
chr7 (51-112)||(34928657-34928718)
chr7 (51-112)||(34928979-34929040)
chr7 (51-112)||(39686863-39686924)
chr7 (51-119)||(30948160-30948228)
chr7 (8-43)||(23058623-23058658)
chr7 (51-99)||(39686554-39686602)
[»] chr6 (32 HSPs)
chr6 (51-120)||(7160803-7160872)
chr6 (51-120)||(22502773-22502842)
chr6 (51-117)||(31407236-31407302)
chr6 (51-116)||(6517506-6517571)
chr6 (68-116)||(10781150-10781198)
chr6 (53-120)||(15913547-15913614)
chr6 (51-116)||(7905246-7905311)
chr6 (51-116)||(22503132-22503197)
chr6 (51-120)||(25485952-25486021)
chr6 (51-116)||(31406881-31406946)
chr6 (51-116)||(32593493-32593558)
chr6 (51-119)||(21836032-21836099)
chr6 (53-116)||(14196618-14196681)
chr6 (8-54)||(7160990-7161036)
chr6 (8-54)||(10781344-10781390)
chr6 (8-54)||(22502968-22503014)
chr6 (51-116)||(14196944-14197009)
chr6 (13-54)||(15913747-15913788)
chr6 (51-116)||(21836388-21836453)
chr6 (53-120)||(7905603-7905670)
chr6 (8-54)||(12065406-12065452)
chr6 (8-54)||(31407072-31407118)
chr6 (51-112)||(363159-363220)
chr6 (51-116)||(7161162-7161227)
chr6 (51-120)||(28000384-28000453)
chr6 (8-40)||(6517696-6517728)
chr6 (14-54)||(21836216-21836256)
chr6 (53-120)||(12065219-12065285)
chr6 (8-54)||(7905437-7905483)
chr6 (51-112)||(362877-362938)
chr6 (51-112)||(22373017-22373078)
chr6 (72-116)||(15913927-15913971)
[»] chr3 (48 HSPs)
chr3 (51-116)||(37778631-37778696)
chr3 (51-116)||(52032497-52032562)
chr3 (52-116)||(10294570-10294634)
chr3 (51-115)||(29118896-29118960)
chr3 (51-120)||(3596108-3596177)
chr3 (51-116)||(11910702-11910767)
chr3 (51-116)||(32306782-32306847)
chr3 (51-116)||(40788778-40788843)
chr3 (60-120)||(33156363-33156423)
chr3 (53-116)||(47551496-47551559)
chr3 (51-120)||(10770489-10770558)
chr3 (51-120)||(10770820-10770889)
chr3 (51-116)||(29685944-29686009)
chr3 (51-116)||(33506308-33506373)
chr3 (53-116)||(29118530-29118593)
chr3 (51-116)||(3469558-3469623)
chr3 (51-116)||(10294917-10294982)
chr3 (51-116)||(29686298-29686363)
chr3 (51-116)||(36314301-36314366)
chr3 (51-116)||(48322380-48322445)
chr3 (51-120)||(52032137-52032206)
chr3 (52-116)||(13948783-13948847)
chr3 (52-116)||(32306427-32306491)
chr3 (60-120)||(41421971-41422031)
chr3 (69-116)||(13949071-13949118)
chr3 (69-116)||(33506181-33506228)
chr3 (8-54)||(3469386-3469432)
chr3 (8-54)||(10307561-10307607)
chr3 (8-54)||(11910885-11910931)
chr3 (51-105)||(35643865-35643919)
chr3 (51-116)||(3469203-3469268)
chr3 (8-51)||(10294749-10294792)
chr3 (8-54)||(13948974-13949020)
chr3 (8-54)||(29686127-29686173)
chr3 (8-54)||(40788614-40788660)
chr3 (14-51)||(3596309-3596346)
chr3 (51-112)||(8041623-8041684)
chr3 (51-120)||(8041945-8042014)
chr3 (51-116)||(36314627-36314692)
chr3 (51-116)||(42855665-42855730)
chr3 (51-116)||(48322706-48322771)
chr3 (51-120)||(54466422-54466491)
chr3 (51-119)||(54466752-54466820)
chr3 (53-116)||(40788423-40788486)
chr3 (8-51)||(43998339-43998382)
chr3 (8-54)||(29118732-29118778)
chr3 (13-54)||(32306610-32306651)
chr3 (8-51)||(52032327-52032371)
[»] scaffold0599 (2 HSPs)
scaffold0599 (51-116)||(2396-2461)
scaffold0599 (8-54)||(2579-2625)
[»] scaffold0388 (1 HSPs)
scaffold0388 (51-120)||(12597-12666)
[»] chr8 (48 HSPs)
chr8 (51-120)||(10445693-10445762)
chr8 (51-120)||(38003764-38003833)
chr8 (51-116)||(44664866-44664931)
chr8 (51-119)||(8997856-8997924)
chr8 (51-130)||(234098-234177)
chr8 (51-130)||(710509-710588)
chr8 (51-130)||(747721-747800)
chr8 (51-130)||(871616-871695)
chr8 (51-118)||(41353575-41353642)
chr8 (51-120)||(6471689-6471758)
chr8 (51-116)||(7983431-7983496)
chr8 (51-116)||(15229934-15229999)
chr8 (51-116)||(35634457-35634522)
chr8 (51-120)||(37542223-37542292)
chr8 (51-116)||(41353931-41353996)
chr8 (51-120)||(42945472-42945541)
chr8 (60-116)||(21432696-21432752)
chr8 (51-116)||(11675023-11675088)
chr8 (51-120)||(25124562-25124631)
chr8 (51-120)||(36325563-36325632)
chr8 (51-116)||(44664511-44664576)
chr8 (52-116)||(8998048-8998112)
chr8 (52-116)||(15230290-15230354)
chr8 (53-116)||(25124923-25124986)
chr8 (8-54)||(15230125-15230171)
chr8 (8-54)||(21432887-21432933)
chr8 (8-54)||(25124757-25124803)
chr8 (8-54)||(44664694-44664740)
chr8 (13-54)||(7983627-7983668)
chr8 (51-116)||(23507785-23507850)
chr8 (13-54)||(41353773-41353814)
chr8 (51-120)||(44406856-44406925)
chr8 (52-116)||(23505055-23505119)
chr8 (68-116)||(27500092-27500140)
chr8 (73-116)||(6472395-6472438)
chr8 (8-54)||(6471876-6471922)
chr8 (72-118)||(37542604-37542650)
chr8 (51-112)||(2266499-2266560)
chr8 (51-112)||(2266821-2266882)
chr8 (51-116)||(11674698-11674763)
chr8 (51-116)||(36325237-36325302)
chr8 (51-120)||(38845298-38845367)
chr8 (51-112)||(38845628-38845689)
chr8 (8-54)||(27500282-27500328)
chr8 (8-54)||(38003649-38003694)
chr8 (51-120)||(3041455-3041524)
chr8 (51-112)||(40775979-40776040)
chr8 (51-112)||(44407186-44407247)
[»] chr5 (25 HSPs)
chr5 (53-116)||(3656778-3656841)
chr5 (51-113)||(8875625-8875687)
chr5 (51-116)||(8875452-8875517)
chr5 (51-116)||(17544406-17544471)
chr5 (51-116)||(20152784-20152849)
chr5 (51-120)||(41930845-41930914)
chr5 (52-116)||(20153274-20153338)
chr5 (60-116)||(33871705-33871761)
chr5 (8-54)||(17544242-17544288)
chr5 (51-120)||(1506296-1506365)
chr5 (51-116)||(41930519-41930584)
chr5 (51-119)||(6757865-6757933)
chr5 (51-110)||(24141461-24141520)
chr5 (53-116)||(33871342-33871405)
chr5 (8-54)||(22298736-22298782)
chr5 (8-54)||(33871533-33871579)
chr5 (51-112)||(297021-297082)
chr5 (51-120)||(297343-297412)
chr5 (51-112)||(1505974-1506035)
chr5 (51-112)||(31482409-31482470)
chr5 (51-112)||(31482731-31482792)
chr5 (52-116)||(21288016-21288080)
chr5 (53-116)||(6758196-6758259)
chr5 (8-54)||(20153112-20153158)
chr5 (52-104)||(22298557-22298609)
[»] scaffold0205 (2 HSPs)
scaffold0205 (51-116)||(21012-21077)
scaffold0205 (52-116)||(21299-21363)
[»] scaffold0042 (1 HSPs)
scaffold0042 (51-116)||(12138-12203)
[»] scaffold0024 (2 HSPs)
scaffold0024 (51-120)||(141593-141662)
scaffold0024 (51-112)||(141923-141984)
[»] scaffold0006 (3 HSPs)
scaffold0006 (51-116)||(222147-222212)
scaffold0006 (51-119)||(221791-221858)
scaffold0006 (8-54)||(221975-222021)
[»] scaffold0771 (3 HSPs)
scaffold0771 (52-116)||(923-987)
scaffold0771 (69-116)||(1211-1258)
scaffold0771 (8-54)||(1114-1160)
[»] scaffold0328 (3 HSPs)
scaffold0328 (52-120)||(11139-11207)
scaffold0328 (8-54)||(11334-11380)
scaffold0328 (51-116)||(11498-11563)
[»] scaffold0559 (1 HSPs)
scaffold0559 (51-112)||(1240-1301)


Alignment Details
Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 7371484 - 7371603
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaaca 107  Q
    |||| ||||||||||| ||||||||||||||||||||||||||  |||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  7371484 gagaagaagatgaagaaaggggtaaaaatgtcatttcaccaataaattagcgattacagagactaatttttaaatgacgtctaattgcaaggacgaaaca 7371583  T
Q  108 catcattaaacctgctatgt 127  Q
    |||| |||| ||| ||||||    
T  7371584 catcgttaagccttctatgt 7371603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 20760863 - 20760933
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacctg 121  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  20760863 ggattagcgattacagagactaatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcctg 20760933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 17189209 - 17189274
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17189209 ggattagcgattacagggactaatttttaaatgacgtctaattgcaaggacgaaacacatcattaa 17189274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 8898583 - 8898520
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  8898583 attagcgattacagtgactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 8898520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 17189022 - 17188957
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  17189022 ggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 17188957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 30326562 - 30326499
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  30326562 attagcgattacagagactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 30326499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 31051018 - 31050953
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  31051018 ggattagcgattacagagactaatttttaaataacgcctaattgcaaggacgaaacacatcattaa 31050953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 32558465 - 32558530
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| |||| ||  ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32558465 ggattagcgattataggaactaatttttaaatgacgtctaattgtaaggacaaaacacatcattaa 32558530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 37929486 - 37929421
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| || |||| ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  37929486 ggattagcgataacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 37929421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 40714512 - 40714447
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| | ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  40714512 ggattaacgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 40714447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 40714801 - 40714866
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  40714801 ggattagcgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 40714866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 45750200 - 45750265
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  45750200 ggattagcgattacaaagactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 45750265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 49955415 - 49955350
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||| | ||||||| |||||||||||||||||||||    
T  49955415 ggattagcgattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaa 49955350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 31058424 - 31058480
Alignment:
Q  60 attacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  31058424 attacattgactaatttttaaatgatgtctaattgcaaggacgaaacacatcattaa 31058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 35040972 - 35041039
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaac 118  Q
    |||||||| ||||||  ||||||||||||||||||| ||||||  |||||||||||||||||||||||    
T  35040972 ggattagcgattacatggactaatttttaaatgacggctaattacaaggacgaaacacatcattaaac 35041039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 12906017 - 12906082
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||  ||||||||||||||||| ||| ||||| |||||||||||||||||||||    
T  12906017 ggattagcgattacatggactaatttttaaatgatgtcaaattgcaaggacgaaacacatcattaa 12906082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 24905235 - 24905170
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||| |||||| || |||||||||||    
T  24905235 ggattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 24905170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 28011697 - 28011762
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||| |||||| || |||||||||||    
T  28011697 ggattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 28011762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 49955705 - 49955770
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| | ||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  49955705 ggattaacgattacaaagactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 49955770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 8898884 - 8898940
Alignment:
Q  60 attacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||| ||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  8898884 attacagagactaatttttaaatgacgcctaattacaaggacgaaacacatcattaa 8898940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 25885368 - 25885416
Alignment:
Q  68 gactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  25885368 gactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 25885416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 31514646 - 31514714
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacc 119  Q
    |||||||||||||||| ||| |||||||||||| || |||||||||||| | |||||||||| ||||||    
T  31514646 ggattagcaattacagggacgaatttttaaatgccgcctaattgtaagggctaaacacatcaataaacc 31514714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 8898749 - 8898703
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  8898749 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 8898703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 28325036 - 28324990
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  28325036 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 28324990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 35038687 - 35038641
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  35038687 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 35038641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 40714676 - 40714630
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  40714676 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 40714630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 28325177 - 28325226
Alignment:
Q  67 tgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  28325177 tgactaatttttaaatgacgcctaattgcaaggccgaaacacatcattaa 28325226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 45749910 - 45749845
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| | ||||||  ||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  45749910 ggattaacgattacaaagactaatttttaaatgacgcctaattgcaaggatgaaacacatcattaa 45749845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 7371349 - 7371289
Alignment:
Q  60 attacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||  |||||||||||||||||  ||||||| |||||||||||| ||||||||||||    
T  7371349 attacagaaactaatttttaaatgacacctaattgcaaggacgaaacatatcattaaacct 7371289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 49955573 - 49955533
Alignment:
Q  14 aagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  49955573 aagatgaagacaggggtaaaaatgtcatttcacgaatggat 49955533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 31058251 - 31058297
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||    
T  31058251 gagaagaagatgaagacaggggtaaaaatgtcatttcgcgaatggat 31058297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 25884745 - 25884704
Alignment:
Q  75 ttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  25884745 ttttaaatgacgtctaattgcaatgacgaaacacatcattaa 25884704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 33442662 - 33442601
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  33442662 ggattagcaattacagagacgaatttttaaatgccgcctaattgcaagggctaaacacatca 33442601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 33442923 - 33442984
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  33442923 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 33442984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 44523516 - 44523561
Alignment:
Q  71 taatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||| | ||||||| |||||||||||||||||||||    
T  44523516 taatttttaaatgaggcctaattgcaaggacgaaacacatcattaa 44523561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 45750036 - 45750082
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| ||||||||||||| || ||||||||||||||||| |||||||    
T  45750036 gagaagaagatgaagacatggataaaaatgtcatttcacgaatggat 45750082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 4716536 - 4716467
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||||||||||  ||| |||||||||||| |  ||||||| |||| | |||||||||| |||||||    
T  4716536 ggattagcaattacatggacgaatttttaaatgccacctaattgcaagggctaaacacatcaataaacct 4716467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 52134136 - 52134075
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||  || ||||||| |||| | ||||||||||    
T  52134136 ggattagcaattacagggacgaatttttaaataccgcctaattgcaagggctaaacacatca 52134075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 52134397 - 52134458
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||| ||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  52134397 ggattaacaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 52134458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 30326696 - 30326736
Alignment:
Q  14 aagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||||||||||| |||||||||||||||||||  |||||||    
T  30326696 aagatgaagacatgggtaaaaatgtcatttcatgaatggat 30326736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 35038502 - 35038454
Alignment:
Q  72 aatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    ||||||||||||||   |||||| ||||||||||||||| |||||||||    
T  35038502 aatttttaaatgacccttaattgcaaggacgaaacacattattaaacct 35038454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 22718007 - 22717938
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22718007 ggattagcgattacatggactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 22717938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 22987209 - 22987274
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22987209 ggattagcgattacatggactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 22987274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 27069268 - 27069333
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27069268 ggattagcaattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 27069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 45463431 - 45463499
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacc 119  Q
    |||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||| |||||||||||    
T  45463431 ggattagcaattacagggactaatttttaaatgacgcctaattgcaaggacgaaacatatcattaaacc 45463499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 11524017 - 11523947
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacctg 121  Q
    |||||| | ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  11524017 ggattaacgattacagagactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaacctg 11523947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 45463141 - 45463076
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  45463141 ggattagcgattacagagactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 45463076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 54858628 - 54858563
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  54858628 ggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 54858563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 3032650 - 3032585
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  3032650 ggattagcgattacaaggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 3032585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 10408247 - 10408312
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||| ||||||    
T  10408247 ggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacaacattaa 10408312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 27149354 - 27149418
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||||||||||||    
T  27149354 ggattagcaattacagggactaatttt-aaatgacgcctaattgcaaggacgaaacacatcattaa 27149418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 51859764 - 51859829
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||  ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  51859764 ggattagcgattacaaagactaatttttaaattacgtctaattgcaaggacgaaacacatcattaa 51859829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 39701284 - 39701336
Alignment:
Q  68 gactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  39701284 gactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaacct 39701336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 27891650 - 27891587
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| ||||||| ||||||||||||||| | ||||||||| |||||||||||||||||||||    
T  27891650 attagcgattacagggactaatttttaaataatgtctaattgcaaggacgaaacacatcattaa 27891587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 50504182 - 50504248
Alignment:
Q  50 tggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||| | ||||||| ||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  50504182 tggattaacgattacagagactaatttttaaatgacgcctaattacaaggacgaaacacatcattaa 50504248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 10407957 - 10407892
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| || |||||||||||||||  ||||||| |||||||||||||||||||||    
T  10407957 ggattagcgattacagggagtaatttttaaatgactcctaattgcaaggacgaaacacatcattaa 10407892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 22567115 - 22567180
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||| |||||| || |||||||||||    
T  22567115 ggattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 22567180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 27068978 - 27068913
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||| | ||||||| |||||||||||||||| ||||    
T  27068978 ggattagcgattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacatccttaa 27068913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 39666838 - 39666773
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| |||||| ||||||||||||||||||| |||||||  || ||||||||||||||||||    
T  39666838 ggattagcgattacattgactaatttttaaatgacttctaattacaaagacgaaacacatcattaa 39666773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 52573296 - 52573231
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| |||||||  |||||||||||||||||| ||||||| || ||||||||||||||||||    
T  52573296 ggattagcgattacaggtactaatttttaaatgacgcctaattgcaaagacgaaacacatcattaa 52573231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 52573586 - 52573651
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||  ||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  52573586 ggattagtgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 52573651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 54858918 - 54858983
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| | ||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  54858918 ggattaacgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 54858983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 5818133 - 5818201
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacc 119  Q
    |||||| | ||||||| ||||||||||||||||||| ||||||  || |||||||||||||||||||||    
T  5818133 ggattaacgattacagggactaatttttaaatgacgcctaattacaaagacgaaacacatcattaaacc 5818201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 6237180 - 6237248
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacc 119  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||||| || ||| |||||| ||||||    
T  6237180 ggattagcaattacagagactaaattttaaatgacgcctaattgtaagaactaaagacatcaataaacc 6237248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 16605661 - 16605605
Alignment:
Q  60 attacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||| ||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  16605661 attacagggactaatttttaaatgacacctaattgcaaggacgaaacacatcattaa 16605605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 3032776 - 3032822
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  3032776 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 3032822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 10408083 - 10408129
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  10408083 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 10408129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 22718133 - 22718179
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  22718133 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 22718179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 22987083 - 22987037
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  22987083 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 22987037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 39701141 - 39701095
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  39701141 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 39701095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 51859639 - 51859593
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  51859639 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 51859593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 9400587 - 9400522
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||| ||||||||||||||  ||||||| |||||| || |||||||||||    
T  9400587 ggattagcaattacagggacgaatttttaaatgacacctaattgcaaggactaatcacatcattaa 9400522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 22923206 - 22923149
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacac 108  Q
    |||||| | ||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  22923206 ggattaacgattacagagactaatttttaaatgacgtctaattaaaaggacgaaacac 22923149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 22927859 - 22927802
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacac 108  Q
    |||||| | ||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  22927859 ggattaacgattacagagactaatttttaaatgacgtctaattaaaaggacgaaacac 22927802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 22984138 - 22984081
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacac 108  Q
    |||||| | ||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  22984138 ggattaacgattacagagactaatttttaaatgacgtctaattaaaaggacgaaacac 22984081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 22997726 - 22997669
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacac 108  Q
    |||||| | ||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  22997726 ggattaacgattacagagactaatttttaaatgacgtctaattaaaaggacgaaacac 22997669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 4982793 - 4982729
Alignment:
Q  52 gattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||||||||||  ||| ||||||||||| ||||||||||| |||||| || |||||||||||    
T  4982793 gattagcaattacatggacgaatttttaaattacgtctaattgcaaggactaatcacatcattaa 4982729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 27934847 - 27934907
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatc 111  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||| |||||| || ||||||    
T  27934847 ggattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatc 27934907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 9144834 - 9144768
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaa 117  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | |||||||||| ||||    
T  9144834 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataaa 9144768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 27069142 - 27069096
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||    
T  27069142 gagaagaagatgaagacagggataaaaatgtcatttcacgaatggat 27069096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 27891816 - 27891770
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||| ||||||||||||||||||| |||||||    
T  27891816 gagaagaagatgaagacagaggtaaaaatgtcatttcacgaatggat 27891770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 39666970 - 39667016
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||    
T  39666970 gagaagaagatgaagacaagggtaaaaatgtcatttcacgaatggat 39667016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 45463267 - 45463313
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||| ||||||||||||||||||||||||||| |||||||    
T  45463267 gagaagaagataaagacaggggtaaaaatgtcatttcacgaatggat 45463313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 52573460 - 52573414
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||    
T  52573460 gagaagaagatgaagacaggggtaaaaatgtcatttcatgaatggat 52573414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 9400848 - 9400913
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||| |||||||||| |||  ||||||| |||||| || |||||||||||    
T  9400848 ggattagcaattacagggacgaatttttaaacgacccctaattgcaaggactaatcacatcattaa 9400913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 22718297 - 22718354
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacac 108  Q
    |||||| ||||||||| || |||||||||||||||| ||||||  |||||||||||||    
T  22718297 ggattaacaattacagagagtaatttttaaatgacgcctaattaaaaggacgaaacac 22718354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 22986919 - 22986862
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacac 108  Q
    |||||| ||||||||| || |||||||||||||||| ||||||  |||||||||||||    
T  22986919 ggattaacaattacagagagtaatttttaaatgacgcctaattaaaaggacgaaacac 22986862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 27934600 - 27934535
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||| |||||||||| |||  ||||||| |||||| || |||||||||||    
T  27934600 ggattagcaattacagggacaaatttttaaacgacccctaattgcaaggactaatcacatcattaa 27934535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 34837142 - 34837081
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  34837142 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 34837081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 34837403 - 34837464
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  34837403 ggattagcaattacagagacgaatttttaaatgccgcctaattgcaagggctaaacacatca 34837464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 38012499 - 38012560
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  38012499 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 38012560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 42738360 - 42738421
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  42738360 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 42738421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 51203677 - 51203616
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  51203677 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 51203616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 6236882 - 6236830
Alignment:
Q  68 gactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||| |||||||||||||||||||| |||||| ||| |||||| |||||||    
T  6236882 gactaaattttaaatgacgtctaattgcaaggactaaagacatcaataaacct 6236830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 9731406 - 9731444
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcac 46  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  9731406 gagaagaagatgaagacaagggtaaaaatgtcatttcac 9731444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 10203680 - 10203630
Alignment:
Q  60 attacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacat 110  Q
    ||||||||||||||||||||||||||   ||||| || |||||||||||||    
T  10203680 attacagtgactaatttttaaatgacccttaattatagggacgaaacacat 10203630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 39667134 - 39667200
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaa 117  Q
    |||||| | ||||||| ||| ||||||||||||||   |||||  ||||||||||||||||||||||    
T  39667134 ggattaacgattacagggaccaatttttaaatgacccgtaattacaaggacgaaacacatcattaaa 39667200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 50504019 - 50504065
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| ||||||||||||| |||||||||||||||||||  |||||||    
T  50504019 gagaagaagatgaagacatgggtaaaaatgtcatttcaagaatggat 50504065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 54858780 - 54858746
Alignment:
Q  20 aagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    ||||||||||||||||||||||||||| |||||||    
T  54858780 aagacaggggtaaaaatgtcatttcacgaatggat 54858746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 4983055 - 4983120
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||  ||  |||||||||| |||| ||||||| |||||| || |||||||||||    
T  4983055 ggattagcaattacaaggatgaatttttaaacgacgcctaattgcaaggactaatcacatcattaa 4983120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 9145095 - 9145156
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| |||  ||||||||||| || ||||||| |||| | ||||||||||    
T  9145095 ggattagcaattacagggacgcatttttaaatgccgcctaattgcaagggctaaacacatca 9145156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 30642359 - 30642392
Alignment:
Q  13 gaagatgaagacaggggtaaaaatgtcatttcac 46  Q
    ||||||||||||||||| ||||||||||||||||    
T  30642359 gaagatgaagacaggggcaaaaatgtcatttcac 30642392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 32950210 - 32950149
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||| | ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  32950210 ggattagcaattactgggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 32950149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 32950471 - 32950532
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| |  ||||||| |||| | ||||||||||    
T  32950471 ggattagcaattacagggacgaatttttaaatgccacctaattgcaagggctaaacacatca 32950532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 33247342 - 33247293
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaagga 100  Q
    |||||||||||||||| ||| ||||||||||||||  ||||||| |||||    
T  33247342 ggattagcaattacagggacgaatttttaaatgacacctaattgcaagga 33247293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 38012238 - 38012177
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| |  |||||||||    
T  38012238 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctgaacacatca 38012177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 42738099 - 42738038
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||| ||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  42738099 ggattaacaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 42738038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 33247602 - 33247670
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacc 119  Q
    |||||||||||||||| |||  ||||||||| ||   ||||||| |||||| || ||||||||||||||    
T  33247602 ggattagcaattacagggacggatttttaaacgatccctaattgcaaggactaatcacatcattaaacc 33247670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 50503876 - 50503828
Alignment:
Q  68 gactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||| |||||||||||| | |||||||  ||||||||||||||||||||    
T  50503876 gactgatttttaaatgatgcctaattgcgaggacgaaacacatcattaa 50503828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 11830432 - 11830367
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11830432 ggattagcaattacagggactaatttttaaatgacgtctaattgcaaggacgaaacacatcattaa 11830367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 8342546 - 8342606
Alignment:
Q  60 attacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8342546 attacagagactaatttttaaatgacgcctaattgtaaggacgaaacacatcattaaacct 8342606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 28226102 - 28226167
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  28226102 ggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 28226167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 41588418 - 41588481
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  41588418 attagcgattacagggactaatttttaaatgacgcctaattgtaaggacgaaacacattattaa 41588481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 8342255 - 8342186
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||| ||||||||  |||||||||||||||||||  |||||| |||||||||||||||||||||||||    
T  8342255 ggattaccaattacatagactaatttttaaatgacgcttaattgcaaggacgaaacacatcattaaacct 8342186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 8710826 - 8710891
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  8710826 ggattagcgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 8710891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 15604407 - 15604342
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  15604407 ggattagcgattacagggactaatttttaaatgacacctaattgcaaggacgaaacacatcattaa 15604342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 15604697 - 15604766
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| ||||||| ||||| ||||||||||||  ||||||| |||||| ||||||||||||||||||    
T  15604697 ggattagcgattacagggactagtttttaaatgacacctaattgcaaggacaaaacacatcattaaacct 15604766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 6573114 - 6573046
Alignment:
Q  52 gattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    ||||||| ||||||  ||| ||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  6573114 gattagcgattacatggacaaatttttaaatgacgcctaattgcagggacgaaacacatcattaaacct 6573046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 14900564 - 14900499
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||| ||||||| ||||||| ||||||| |||||| || |||||||||||    
T  14900564 ggattagcaattacagggacgaatttttgaatgacgcctaattgcaaggactaatcacatcattaa 14900499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 33740032 - 33740093
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || |||||||||||| | ||||||||||    
T  33740032 ggattagcaattacagggacgaatttttaaatgccgcctaattgtaagggctaaacacatca 33740093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 8710662 - 8710700
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcac 46  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  8710662 gagaagaagatgaagacaggggtaaaaatgtcatttcac 8710700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 15604533 - 15604579
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||| ||||||||||||||||||||||| |||||||    
T  15604533 gagaagaagatgaaggcaggggtaaaaatgtcatttcacgaatggat 15604579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 1695808 - 1695747
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  1695808 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 1695747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 6573611 - 6573546
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||  ||| ||||||||||||||| ||||||| | ||| |||||||||||||||    
T  6573611 ggattagcgattacatggacgaatttttaaatgacgcctaattggagggatgaaacacatcattaa 6573546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 13995741 - 13995680
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  13995741 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 13995680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 13996002 - 13996063
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  13996002 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 13996063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 14900810 - 14900875
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||| |||||||||| |||  ||||||| |||||| || |||||||||||    
T  14900810 ggattagcaattacagggacaaatttttaaacgacccctaattgcaaggactaatcacatcattaa 14900875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 33062118 - 33062057
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  33062118 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 33062057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 33062379 - 33062440
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  33062379 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 33062440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 33739771 - 33739710
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  33739771 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 33739710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 41248627 - 41248558
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||||||||||| ||  |||||||||||| || ||||||| |||| | |||||||||| |||||||    
T  41248627 ggattagcaattacagggatgaatttttaaatgccgcctaattgcaagggctaaacacatcaataaacct 41248558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 41587466 - 41587420
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||| ||||||||  |||||||    
T  41587466 gagaagaagatgaagacaggggtaaaaatatcatttcatgaatggat 41587420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 44714121 - 44714175
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaa 105  Q
    |||||||||||||||| |||||||||||||| |||  ||||||| ||||| ||||    
T  44714121 ggattagcaattacagggactaatttttaaacgacccctaattgcaaggatgaaa 44714175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 1696069 - 1696130
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    ||||||||||||||||  || |||||||||||| || ||||||| |||| | ||||||||||    
T  1696069 ggattagcaattacaggaacgaatttttaaatgccgcctaattgcaagggctaaacacatca 1696130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 41248888 - 41248949
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| ||||   ||||||||||    
T  41248888 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggttaaacacatca 41248949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 41587302 - 41587238
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| | ||||||| ||| ||||||||||||||   |||||| |||||||||||||||||||||    
T  41587302 ggattaacgattacag-gaccaatttttaaatgactcttaattgcaaggacgaaacacatcattaa 41587238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 6e-22; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 28890647 - 28890578
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28890647 ggattagcgattacaaggactaatttttaaatgacgtctaattgcaaggacgaaacacatcattaaacct 28890578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 32068164 - 32068098
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaa 117  Q
    |||||||| ||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32068164 ggattagcgattacaaggactaatttttaaatgacgtctaattgcaaggacgaaacacatcattaaa 32068098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 46204486 - 46204420
Alignment:
Q  54 ttagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    ||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  46204486 ttagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaacct 46204420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 32934706 - 32934771
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  32934706 ggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 32934771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 42618269 - 42618338
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| |||||||  |||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  42618269 ggattagcgattacaggaactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaacct 42618338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 25453196 - 25453131
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| |||| || ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  25453196 ggattagcgattatagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 25453131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 32934416 - 32934347
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| ||||||| ||||||||||||||||||  ||||||| ||||| |||||||||||||||||||    
T  32934416 ggattagcgattacagcgactaatttttaaatgacacctaattgcaaggatgaaacacatcattaaacct 32934347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 42617979 - 42617914
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| |||| || ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  42617979 ggattagcgattaaagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 42617914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 10600307 - 10600375
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacc 119  Q
    |||||||| ||||||  ||||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  10600307 ggattagcgattacaaggactaatttttaaatgacgcctaattgcaatgacgaaacacatcattaaacc 10600375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 43266626 - 43266689
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| ||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  43266626 attagcgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 43266689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 25628546 - 25628480
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaa 117  Q
    |||||| | |||||| |||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  25628546 ggattatcgattacaatgactaatttttaaatgacgcctaattgcaagcacgaaacacatcattaaa 25628480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 23058497 - 23058432
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||| |||||||| ||||||||||||||||||   |||||| |||||||||||||||||||||    
T  23058497 ggattagtaattacagggactaatttttaaatgactcttaattgcaaggacgaaacacatcattaa 23058432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 27138299 - 27138364
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||  ||||||||||||||||||| || |||| |||||||||||||||||||||    
T  27138299 ggattagcgattacaaggactaatttttaaatgacgcctgattgaaaggacgaaacacatcattaa 27138364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 32068454 - 32068519
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| || |||||||||||||||  ||||||| |||||||||||||||||||||    
T  32068454 ggattagcgattacagggattaatttttaaatgactcctaattgcaaggacgaaacacatcattaa 32068519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 33828332 - 33828397
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||||  ||||||| ||||||||||| |||||||||    
T  33828332 ggattagcgattacagagactaatttttaaatgacacctaattgcaaggacgaaactcatcattaa 33828397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 39274938 - 39274869
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| ||||||| ||||||||||||||| ||| | ||||| |||||| ||||||||||||||||||    
T  39274938 ggattagcgattacagagactaatttttaaataacgccaaattgcaaggacaaaacacatcattaaacct 39274869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 43266334 - 43266269
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| | ||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  43266334 ggattaacgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 43266269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 10600094 - 10600031
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcatt 114  Q
    |||||| | |||| || ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  10600094 ggattaacgattatagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcatt 10600031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 10600143 - 10600189
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  10600143 gagaagaagatgaagacaggggtaaaaatgtcatttcacaaatggat 10600189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 22081791 - 22081745
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  22081791 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 22081745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 25453322 - 25453368
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  25453322 gagaagaagatgaagacaggggtaaaaatgtcatttcacaaatggat 25453368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 43266498 - 43266452
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  43266498 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 43266452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 46205503 - 46205549
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  46205503 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 46205549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 22081917 - 22081982
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| |||||||  ||||||||||||||||||  |||||| |||||||||||| ||||||||    
T  22081917 ggattagcgattacagaaactaatttttaaatgacgcataattgcaaggacgaaacaaatcattaa 22081982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 25453486 - 25453555
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| ||| ||| |||||||||||||||||||  |||||  || ||||||||||||||||||||||    
T  25453486 ggattagcgatttcagggactaatttttaaatgacgcttaattacaaagacgaaacacatcattaaacct 25453555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 25628836 - 25628901
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||  |||||||||||||||||||  |||||| |||||||| ||||||||||||    
T  25628836 ggattagcgattacatagactaatttttaaatgacgcataattgcaaggacgagacacatcattaa 25628901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 32680663 - 32680598
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||||||||||||  || ||||||||||||||| ||||||| |||||| || |||||||||||    
T  32680663 ggattagcaattacaggaacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 32680598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 22081611 - 22081563
Alignment:
Q  68 gactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||||    
T  22081611 gactaatttttaaatgacgcataattgcaaggacgaaacacatcattaa 22081563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 18087698 - 18087757
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacat 110  Q
    |||||||| ||||||||||| ||||||||||||||  ||||||| |||||| ||||||||    
T  18087698 ggattagcgattacagtgaccaatttttaaatgacccctaattgcaaggactaaacacat 18087757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 25628710 - 25628664
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| ||||||||||| |||||||||||||||||||||| |||||||    
T  25628710 gagaagaagatgaagataggggtaaaaatgtcatttcacgaatggat 25628664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 32068290 - 32068336
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||    
T  32068290 gagaagaagatgaagacaggggtaaaaatgtcatttcatgaatggat 32068336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 32934542 - 32934588
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| ||||||||||| |||||||||||||||||||||| |||||||    
T  32934542 gagaagaagatgaagataggggtaaaaatgtcatttcacgaatggat 32934588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 120
Target Start/End: Complemental strand, 41899274 - 41899236
Alignment:
Q  82 tgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  41899274 tgacgtctaattgcaaggacgaaacacatcattaaacct 41899236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 42618105 - 42618151
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||    
T  42618105 gagaagaagatgaagacaggggtaaaaatgtcatttcatgaatggat 42618151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 23058807 - 23058852
Alignment:
Q  71 taatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| | ||||| |||||||||||||||||||||    
T  23058807 taatttttaaatgacgccgaattgcaaggacgaaacacatcattaa 23058852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 30948489 - 30948550
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  30948489 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 30948550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 32680924 - 32680989
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||  ||| |||||||||| |||| ||||||| |||||| || |||||||||||    
T  32680924 ggattagcaattacatggacgaatttttaaacgacgcctaattgcaaggactaatcacatcattaa 32680989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 34928718 - 34928657
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  34928718 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 34928657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 34928979 - 34929040
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  34928979 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 34929040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 39686863 - 39686924
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  39686863 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 39686924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 30948228 - 30948160
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacc 119  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| ||||   |||||||||| ||||||    
T  30948228 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggttaaacacatcaataaacc 30948160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 43
Target Start/End: Original strand, 23058623 - 23058658
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcattt 43  Q
    |||| |||||||||||||||||||||||||||||||    
T  23058623 gagaagaagatgaagacaggggtaaaaatgtcattt 23058658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 39686602 - 39686554
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaagg 99  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| ||||    
T  39686602 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagg 39686554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 6e-22; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 7160872 - 7160803
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  7160872 ggattagcgattacagagactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaacct 7160803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 22502842 - 22502773
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| ||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  22502842 ggattagcgattacaaggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaacct 22502773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 31407236 - 31407302
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaa 117  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||||||    
T  31407236 ggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaagcacatcattaaa 31407302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 6517571 - 6517506
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  6517571 ggattagcgattacaaagactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 6517506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 10781198 - 10781150
Alignment:
Q  68 gactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10781198 gactaatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 10781150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 15913614 - 15913547
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||||||||  ||||||||||||||||||| ||||||| ||  |||||||||||||||||||||    
T  15913614 attagcaattacaaagactaatttttaaatgacgcctaattgcaataacgaaacacatcattaaacct 15913547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 7905311 - 7905246
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| | ||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  7905311 ggattaacgattacaaggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 7905246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 22503132 - 22503197
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||  ||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  22503132 ggattagcgattacaaggactaatttttaaatgacgcctaattgcaaggacgaaacacattattaa 22503197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 25486021 - 25485952
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||||||||||| ||| |||||||||||||||  |||||| |||||| || |||||||||||||||    
T  25486021 ggattagcaattacagggacgaatttttaaatgacgcttaattgcaaggactaatcacatcattaaacct 25485952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 31406946 - 31406881
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| | ||||||| ||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  31406946 ggattaacgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacattattaa 31406881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 32593558 - 32593493
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| |||| || ||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  32593558 ggattagcgattatagggactaatttttaaatgacgcctaattgaaaggactaaacacatcattaa 32593493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 21836099 - 21836032
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacc 119  Q
    |||||||| ||||||  ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  21836099 ggattagcgattacaa-gactaatttttaaatgacgcctaattgcaagaacgaaacacatcattaaacc 21836032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 14196681 - 14196618
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||| ||| ||||||||||||||| ||||||| |||||| || |||||||||||    
T  14196681 attagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 14196618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 7161036 - 7160990
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  7161036 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 7160990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 10781390 - 10781344
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  10781390 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 10781344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 22502968 - 22503014
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  22502968 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 22503014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 14196944 - 14197009
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||| |||||||||| |||| ||||||| |||||| || |||||||||||    
T  14196944 ggattagcaattacagggacgaatttttaaacgacgcctaattgcaaggactaatcacatcattaa 14197009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 15913747 - 15913788
Alignment:
Q  13 gaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  15913747 gaagatgaagacaggggtaaaaatgtcatttcacgaatggat 15913788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 21836388 - 21836453
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||   |||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  21836388 ggattagcgattacaagaactaatttttaaatgacgcctaattgcaaggatgaaacacatcattaa 21836453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 7905603 - 7905670
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||| |||| || ||| ||||| ||||||||  ||||||| |||||||||||||||||||||||||    
T  7905603 attagcgattatagggacaaatttataaatgacacctaattgcaaggacgaaacacatcattaaacct 7905670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 12065452 - 12065406
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||    
T  12065452 gagaagaagatgaagacaagggtaaaaatgtcatttcacaaatggat 12065406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 31407072 - 31407118
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||    
T  31407072 gagaagaagatgaagacagggataaaaatgtcatttcacgaatggat 31407118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 363159 - 363220
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  363159 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 363220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 7161162 - 7161227
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||  |||| || ||||||||||||||||||| ||||||| |||||||||| | ||||||||    
T  7161162 ggattagtgattatagggactaatttttaaatgacgcctaattgcaaggacgaaatatatcattaa 7161227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 28000453 - 28000384
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    ||||||||||||| || ||| |||||||||||| || ||||||| |||| | |||||||||| |||||||    
T  28000453 ggattagcaattaaagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataaacct 28000384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 6517696 - 6517728
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtca 40  Q
    |||||||||||||||||||||||||||||||||    
T  6517696 gagatgaagatgaagacaggggtaaaaatgtca 6517728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 21836256 - 21836216
Alignment:
Q  14 aagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  21836256 aagatgaagacaggggtaaaaatgtcatttcaagaatggat 21836216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 12065285 - 12065219
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||| |||||| |||||||||||||||||| | ||||||| || || ||||| |||||||||||||    
T  12065285 attagcgattaca-tgactaatttttaaatgatgcctaattgcaaagatgaaacgcatcattaaacct 12065219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 7905437 - 7905483
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  7905437 gagaagaatatgaagacaggggtaagaatgtcatttcacaaatggat 7905483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 362938 - 362877
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||| ||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  362938 ggattaacaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 362877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 22373017 - 22373078
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||| ||||||    
T  22373017 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggcaaaaaacatca 22373078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 15913927 - 15913971
Alignment:
Q  72 aatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||||||||||   |||||| |||||||||||||||||||||    
T  15913927 aatttttaaatgacccttaattgcaaggacgaaacacatcattaa 15913971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 6e-22; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 37778631 - 37778696
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  37778631 ggattagcaattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 37778696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 52032497 - 52032562
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  52032497 ggattagcgattacagggactaatttttaaatgacgtctaattgcaaggacgaaacacatcattaa 52032562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 10294634 - 10294570
Alignment:
Q  52 gattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  10294634 gattagcaattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 10294570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 29118896 - 29118960
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcatta 115  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  29118896 ggattagcgattacagtgactaatttttaaatgacgcctaattgcaaggacgaaacacatcatta 29118960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 3596177 - 3596108
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| |||||| |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  3596177 ggattagcgattacattgactaatttttaaatcacgcctaattgcaaggacgaaacacatcattaaacct 3596108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 11910767 - 11910702
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||    
T  11910767 ggattagcgattacagggattaatttttaaatgacgtctaattgcaaggacgaaacacatcattaa 11910702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 32306782 - 32306847
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  32306782 ggattagcgattacattgactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 32306847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 40788778 - 40788843
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  40788778 ggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 40788843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 33156363 - 33156423
Alignment:
Q  60 attacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  33156363 attacaatgactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaacct 33156423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 47551559 - 47551496
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| ||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||    
T  47551559 attagcgattacagggactaatttttaaatgacatctaattgcaaggacgaaacacatcattaa 47551496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 10770558 - 10770489
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||| |||||| || |||||||||||||||    
T  10770558 ggattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaaacct 10770489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 10770820 - 10770889
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||| ||||||||| ||| ||||||||||||||| |||||||||||||| || |||||||||||||||    
T  10770820 ggattaacaattacagggacgaatttttaaatgacgcctaattgtaaggactaatcacatcattaaacct 10770889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 29686009 - 29685944
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  29686009 ggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaatacatcattaa 29685944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 33506308 - 33506373
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  33506308 ggattagcgattacagggactaatttttaaataacgcctaattgaaaggacgaaacacatcattaa 33506373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 29118593 - 29118530
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| ||||||| |||||||||||||||||||  |||||| |||||||||||||||||||||    
T  29118593 attagcgattacagggactaatttttaaatgacgcataattgcaaggacgaaacacatcattaa 29118530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 3469558 - 3469623
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| |||||||  |||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  3469558 ggattagcgattacaggaactaatttttaaatgacgcctaattgcaaggacgaaacagatcattaa 3469623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 10294917 - 10294982
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| |||||||  |||||||||||||| |||||| |||| |||||||||||||||||||||    
T  10294917 ggattagcgattacaggaactaatttttaaattacgtctgattgcaaggacgaaacacatcattaa 10294982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 29686298 - 29686363
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||  |||||| ||||||||||| |||||||| ||||||| |||||||||||||||||||||    
T  29686298 ggattagtgattacaatgactaattttaaaatgacgcctaattgcaaggacgaaacacatcattaa 29686363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 36314366 - 36314301
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||| |||||| || |||||||||||    
T  36314366 ggattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 36314301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 48322445 - 48322380
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||| ||||||||||||| ||||||||| |||||| || |||||||||||    
T  48322445 ggattagcaattacagggacgaatttttaaatgatgtctaattgcaaggactaatcacatcattaa 48322380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 52032206 - 52032137
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| ||||||  || |||||||||||||||| ||||||| |||||| ||||||||||||||||||    
T  52032206 ggattagcgattacaaggattaatttttaaatgacgcctaattgcaaggacaaaacacatcattaaacct 52032137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 13948847 - 13948783
Alignment:
Q  52 gattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||| ||||||  ||||||||||||||||| | ||||||| |||||||||||||||||||||    
T  13948847 gattagcgattacatggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaa 13948783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 32306491 - 32306427
Alignment:
Q  52 gattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||| ||||||   |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  32306491 gattagcgattacatgaactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 32306427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 41422031 - 41421971
Alignment:
Q  60 attacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||  |||||||||||| ||||| ||||||| |||||||||||||||||||||||||    
T  41422031 attacaggaactaatttttaactgacgcctaattgcaaggacgaaacacatcattaaacct 41421971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 13949071 - 13949118
Alignment:
Q  69 actaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  13949071 actaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 13949118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 33506228 - 33506181
Alignment:
Q  69 actaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  33506228 actaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 33506181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 3469432 - 3469386
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  3469432 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 3469386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 10307607 - 10307561
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  10307607 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 10307561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 11910931 - 11910885
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  11910931 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 11910885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 35643919 - 35643865
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaa 105  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  35643919 ggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaa 35643865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 3469268 - 3469203
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||  ||||||  ||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  3469268 ggattagtgattacatggactaatttttaaatgacgcctaattgcaaagacgaaacacatcattaa 3469203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 10294792 - 10294749
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatg 51  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    
T  10294792 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatg 10294749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 13948974 - 13949020
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||    
T  13948974 gagaagaagatgaagacaagggtaaaaatgtcatttcacgaatggat 13949020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 29686173 - 29686127
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||    
T  29686173 gagaagaagatgaagacagggataaaaatgtcatttcacgaatggat 29686127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 40788614 - 40788660
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||| ||||||||||||||||||||| |||||||    
T  40788614 gagaagaagatgaagactggggtaaaaatgtcatttcacgaatggat 40788660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 3596309 - 3596346
Alignment:
Q  14 aagatgaagacaggggtaaaaatgtcatttcaccaatg 51  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  3596309 aagatgaagacaggggtaaaaatgtcatttcacgaatg 3596346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 8041684 - 8041623
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  8041684 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 8041623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 8041945 - 8042014
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||||||||||| ||| ||| |||||||| || ||||||| |||| | |||||||||| |||||||    
T  8041945 ggattagcaattacagggacgaatatttaaatgccgcctaattgcaagggctaaacacatcaataaacct 8042014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 36314627 - 36314692
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| ||||||||| ||| |||||||||| |||| ||||||| |||||| || |||||||||||    
T  36314627 ggattaacaattacagggacgaatttttaaacgacgcctaattgcaaggactaatcacatcattaa 36314692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 42855665 - 42855730
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| | ||||  ||||||||||||||||||| ||||||| |||| | ||||||||||||||    
T  42855665 ggattagcgaatacatggactaatttttaaatgacgcctaattgcaagggctaaacacatcattaa 42855730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 48322706 - 48322771
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| ||||||||| ||| |||||||||| |||| ||||||| |||||| || |||||||||||    
T  48322706 ggattaacaattacagggacgaatttttaaacgacgcctaattgcaaggactaatcacatcattaa 48322771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 54466491 - 54466422
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||| ||||||||| ||| |||||||||||| || ||||||| |||| | |||||||||| |||||||    
T  54466491 ggattaacaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataaacct 54466422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 54466752 - 54466820
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacc 119  Q
    |||||| ||||||||| ||| |||||||||||| || ||||||| |||| | |||||||||| ||||||    
T  54466752 ggattaccaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataaacc 54466820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 40788486 - 40788423
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| |||| || ||||||||||||||| |||  |||||| ||||| |||||||||||||||    
T  40788486 attagcgattagagggactaatttttaaataacgcttaattgcaaggaagaaacacatcattaa 40788423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 43998339 - 43998382
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatg 51  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||    
T  43998339 gagaagaagatgaagacatgggtaaaaatgtcatttcacgaatg 43998382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 29118732 - 29118778
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||| ||||| ||||||||||||||||||||| |||||||    
T  29118732 gagaagaagattaagacgggggtaaaaatgtcatttcacgaatggat 29118778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 32306651 - 32306610
Alignment:
Q  13 gaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||||||||||||| ||||||||| ||||||||| |||||||    
T  32306651 gaagatgaagacagcggtaaaaatatcatttcacgaatggat 32306610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 52032371 - 52032327
Alignment:
Q  8 gagatgaagatgaagac-aggggtaaaaatgtcatttcaccaatg 51  Q
    |||| |||||||||||| |||||||||||||||||||||| ||||    
T  52032371 gagaagaagatgaagaccaggggtaaaaatgtcatttcacgaatg 52032327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 2461 - 2396
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||    
T  2461 ggattagcgattacagggattaatttttaaatgacgtctaattgcaaggacgaaacacatcattaa 2396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 2625 - 2579
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  2625 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 2579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 12597 - 12666
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||| | ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  12597 ggattaacgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaacct 12666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 10445693 - 10445762
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| ||||||| ||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  10445693 ggattagcgattacagggactaatttttaaatgacacctaattgcaaggacgaaacacatcattaaacct 10445762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 38003764 - 38003833
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| ||||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  38003764 ggattagcgattacagagactaatttttaaattacgactaattgcaaggacgaaacacatcattaaacct 38003833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 44664866 - 44664931
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  44664866 ggattagcgattacagagactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 44664931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 8997924 - 8997856
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacc 119  Q
    |||||||| ||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  8997924 ggattagcgattgcagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaacc 8997856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 234098 - 234177
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacctgctatgtatt 130  Q
    |||||| ||||||||| ||||||||||||||||| | ||||||| ||||||||||||||||||||| ||| |||| ||||    
T  234098 ggattaacaattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaagcctactatatatt 234177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 710509 - 710588
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacctgctatgtatt 130  Q
    |||||| ||||||||| ||||||||||||||||| | ||||||| ||||||||||||||||||||| ||| |||| ||||    
T  710509 ggattaacaattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaagcctactatatatt 710588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 747721 - 747800
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacctgctatgtatt 130  Q
    |||||| ||||||||| ||||||||||||||||| | ||||||| ||||||||||||||||||||| ||| |||| ||||    
T  747721 ggattaacaattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaagcctactatatatt 747800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 871616 - 871695
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacctgctatgtatt 130  Q
    |||||| ||||||||| ||||||||||||||||| | ||||||| ||||||||||||||||||||| ||| |||| ||||    
T  871616 ggattaacaattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaagcctactatatatt 871695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 41353642 - 41353575
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaac 118  Q
    |||||||| |||||||  |||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  41353642 ggattagcgattacagaaactaatttttaaatgacgcctaattgtaaggacgaaacatatcattaaac 41353575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 6471758 - 6471689
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| |||| || |||| |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  6471758 ggattagcgattatagagactcatttttaaatgacgcctaattgcaaggacgaaacacatcattaaacct 6471689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 7983496 - 7983431
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  7983496 ggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacataattaa 7983431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 15229999 - 15229934
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  15229999 ggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacaaaacacatcattaa 15229934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 35634457 - 35634522
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| |||||||||||||||||||  |||||| |||||||||||||||||||||    
T  35634457 ggattagcgattacagggactaatttttaaatgacgcttaattgcaaggacgaaacacatcattaa 35634522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 37542292 - 37542223
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| |||| || ||||||||||||||||||| ||||||| || ||||||||||||||||||||||    
T  37542292 ggattagcgattaaagggactaatttttaaatgacgcctaattgcaaagacgaaacacatcattaaacct 37542223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 41353931 - 41353996
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||  ||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  41353931 ggattagtgattacagggactaatttttaaatgacgcctaattataaggacgaaacacatcattaa 41353996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 42945472 - 42945541
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| |||||||  |||||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  42945472 ggattagcgattacaggaactaatttttaaatgacgcctaattgcaagaacgaaacacatcattaaacct 42945541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 21432752 - 21432696
Alignment:
Q  60 attacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||    
T  21432752 attacagagactaatttttatatgacgtctaattgcaaggacgaaacacatcattaa 21432696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 11675023 - 11675088
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||| |||||| || |||||||||||    
T  11675023 ggattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 11675088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 25124631 - 25124562
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||| ||||||  ||||||||||||||||||| ||||||| ||| |||||| ||||||||||||||    
T  25124631 ggattagcgattacatggactaatttttaaatgacgcctaattgcaagaacgaaatacatcattaaacct 25124562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 36325563 - 36325632
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||| ||||||||| ||| ||||||||||||||| ||||||| |||||| || |||||||||||||||    
T  36325563 ggattaacaattacagagacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaaacct 36325632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 44664576 - 44664511
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| | ||||||| ||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  44664576 ggattaacgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacataattaa 44664511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 8998048 - 8998112
Alignment:
Q  52 gattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||| ||||||   |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  8998048 gattagcgattacatgaactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 8998112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 15230290 - 15230354
Alignment:
Q  52 gattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||| ||||||| ||||||||||||||||||  ||||||| |||||| ||||||||||||||    
T  15230290 gattagcgattacagggactaatttttaaatgacacctaattgcaaggacaaaacacatcattaa 15230354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 25124923 - 25124986
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| ||||||| ||||||||||||||||||  ||||||| ||||||||||||||| |||||    
T  25124923 attagcgattacagagactaatttttaaatgacacctaattgcaaggacgaaacacatgattaa 25124986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 15230125 - 15230171
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  15230125 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 15230171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 21432887 - 21432933
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  21432887 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 21432933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 25124757 - 25124803
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  25124757 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 25124803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 44664740 - 44664694
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  44664740 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 44664694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 7983627 - 7983668
Alignment:
Q  13 gaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  7983627 gaagatgaagacaggggtaaaaatgtcatttcacgaatggat 7983668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 23507785 - 23507850
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| |||  |||||||||||||| ||||||| |||||| || |||||||||||    
T  23507785 ggattagcaattacagggacgtatttttaaatgacgcctaattgcaaggactaatcacatcattaa 23507850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 41353773 - 41353814
Alignment:
Q  13 gaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  41353773 gaagatgaagacaggggtaaaaatgtcatttcacgaatggat 41353814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 44406925 - 44406856
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | |||||||||| |||||||    
T  44406925 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataaacct 44406856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 23505119 - 23505055
Alignment:
Q  52 gattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||||||||||  ||| ||||||||||||||| ||||||| |||||| || |||||||||||    
T  23505119 gattagcaattacatggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 23505055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 27500140 - 27500092
Alignment:
Q  68 gactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||||||| |||||| |||||||||||| ||||||||    
T  27500140 gactaatttttaaatgacgtttaattgcaaggacgaaacatatcattaa 27500092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 116
Target Start/End: Original strand, 6472395 - 6472438
Alignment:
Q  73 atttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||| ||||||| |||||||||||||||||||||    
T  6472395 atttttaaatgacgcctaattgcaaggacgaaacacatcattaa 6472438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 6471922 - 6471876
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| ||||||||||||||||||||||||||||||| || |||||||    
T  6471922 gagaagaagatgaagacaggggtaaaaatgtcattttacgaatggat 6471876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 118
Target Start/End: Original strand, 37542604 - 37542650
Alignment:
Q  72 aatttttaaatgacgtctaattgtaaggacgaaacacatcattaaac 118  Q
    ||||||||||||||| ||||||||||||| ||||||||| |||||||    
T  37542604 aatttttaaatgacgcctaattgtaaggatgaaacacattattaaac 37542650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 2266560 - 2266499
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  2266560 ggattagcaattacagagacgaatttttaaatgccgcctaattgcaagggctaaacacatca 2266499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 2266821 - 2266882
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  2266821 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 2266882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 11674763 - 11674698
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| ||||||||| ||| |||||||||| |||| ||||||| |||||| || |||||||||||    
T  11674763 ggattaacaattacagggacgaatttttaaacgacgcctaattgcaaggactaatcacatcattaa 11674698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 36325302 - 36325237
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| ||||||||| ||| |||||||||| |||  |||||||||||||| || |||||||||||    
T  36325302 ggattaacaattacagggacgaatttttaaacgacccctaattgtaaggactaatcacatcattaa 36325237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 38845367 - 38845298
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| ||||   |||||||||| |||||||    
T  38845367 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggttaaacacatcaataaacct 38845298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 38845628 - 38845689
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  38845628 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 38845689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 27500282 - 27500328
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||| ||| ||||| |||||||    
T  27500282 gagaagaagatgaagacaggggtaaaaatatcaattcacgaatggat 27500328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 38003649 - 38003694
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||    
T  38003649 gagaagaagatgaagacaggg-taaaaatgtcatttcacgaatggat 38003694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 3041524 - 3041455
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||||||||||  ||| |||||||||||| ||  |||||| |||| | |||||||||| |||||||    
T  3041524 ggattagcaattacatggacgaatttttaaatgccgcttaattgcaagggctaaacacatcaataaacct 3041455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 40775979 - 40776040
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| ||||   ||||||||||    
T  40775979 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggttaaacacatca 40776040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 44407186 - 44407247
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||  |||||||||||| || ||||||| |||| | ||||||||||    
T  44407186 ggattagcaattacagggatgaatttttaaatgccgcctaattgcaagggctaaacacatca 44407247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 3656778 - 3656841
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| ||||||  ||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  3656778 attagcgattacaaagactaatttttaaatgacgtctaattgcaaggtcgaaacacatcattaa 3656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 8875625 - 8875687
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcat 113  Q
    |||||| | ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  8875625 ggattaacgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcat 8875687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 8875517 - 8875452
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| | ||||||| |||||||||||||||||||  |||||| |||||||||||||||||||||    
T  8875517 ggattaacgattacagggactaatttttaaatgacgcttaattgcaaggacgaaacacatcattaa 8875452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 17544406 - 17544471
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| | |||||||  |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  17544406 ggattaacgattacaggaactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 17544471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 20152849 - 20152784
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||| |||||||||||||||||||  |||||| | |||||||||||||||||||    
T  20152849 ggattagcgattacagagactaatttttaaatgacgcttaattgcatggacgaaacacatcattaa 20152784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 41930845 - 41930914
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||  |||||| || |||||||||||||||    
T  41930845 ggattagcaattacagggacgaatttttaaatgacgcctaattacaaggactaatcacatcattaaacct 41930914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 20153274 - 20153338
Alignment:
Q  52 gattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||| ||||||  ||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  20153274 gattagcgattacaaggactaatttttaaatgacacctaattgcaaggacgaaacacatcattaa 20153338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 33871705 - 33871761
Alignment:
Q  60 attacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||| |||||||||||||||| || ||||||| |||||||||||||||||||||    
T  33871705 attacagagactaatttttaaatggcgcctaattgcaaggacgaaacacatcattaa 33871761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 17544242 - 17544288
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  17544242 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 17544288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 1506296 - 1506365
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | |||||||||| |||||||    
T  1506296 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataaacct 1506365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 41930584 - 41930519
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||| |||||||||| ||| |||||||| |||||| || |||||||||||    
T  41930584 ggattagcaattacagggacaaatttttaaacgacctctaattgcaaggactaatcacatcattaa 41930519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 6757933 - 6757865
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacc 119  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||| |||||| || ||| ||| ||||||    
T  6757933 ggattagcaattacagggacaaatttttaaatgacgcctaattgcaaggactaatcacgtcaataaacc 6757865  T

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Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 24141520 - 24141461
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacat 110  Q
    |||||| | ||||||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  24141520 ggattaacgattacagggaccaatttttaaatgacgtctaattgcagggacgaaacacat 24141461  T

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Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 33871405 - 33871342
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| ||||||| ||||||||||||||||||   |||||| |||||| ||||||||||||||    
T  33871405 attagcgattacagggactaatttttaaatgacacttaattgcaaggacaaaacacatcattaa 33871342  T

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Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 22298736 - 22298782
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||    
T  22298736 gagaagaagatgaagacacgggtaaaaatgtcatttcacgaatggat 22298782  T

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Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 33871533 - 33871579
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||| ||||||||| |||||||    
T  33871533 gagaagaagatgaagacaggggtaaaaatatcatttcacgaatggat 33871579  T

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Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 297082 - 297021
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  297082 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 297021  T

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Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 297343 - 297412
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||||||||||| ||| |||||||||||| || ||||||  |||| | |||||||||| |||||||    
T  297343 ggattagcaattacagggacgaatttttaaatgtcgcctaattacaagggctaaacacatcaataaacct 297412  T

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Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 1506035 - 1505974
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  1506035 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 1505974  T

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Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 31482470 - 31482409
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  31482470 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 31482409  T

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Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 31482731 - 31482792
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||| | ||||||||||    
T  31482731 ggattagcaattacagggacaaatttttaaatgccgcctaattgcaagggctaaacacatca 31482792  T

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Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 21288016 - 21288080
Alignment:
Q  52 gattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||| ||||||  || ||||||||||| |||||||||||  |||||| ||||||||||||||    
T  21288016 gattagcgattacatggattaatttttaaacgacgtctaattacaaggacaaaacacatcattaa 21288080  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 6758196 - 6758259
Alignment:
Q  53 attagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||| ||||||||| ||| |||||||||| |||| ||||||| |||||| || |||||||||||    
T  6758196 attaacaattacagggacgaatttttaaacgacgcctaattgcaaggactaatcacatcattaa 6758259  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 20153112 - 20153158
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| ||||||||||| |||||||||||||||||||| | |||||||    
T  20153112 gagaagaagatgaagataggggtaaaaatgtcatttcgcgaatggat 20153158  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 22298609 - 22298557
Alignment:
Q  52 gattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaa 104  Q
    ||||||| ||||||  ||||||||||||||||||| ||||||| || ||||||    
T  22298609 gattagcgattacatggactaatttttaaatgacgcctaattgcaatgacgaa 22298557  T

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Target: scaffold0205 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 21077 - 21012
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||| |||||| || |||||||||||    
T  21077 ggattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 21012  T

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Target: scaffold0205; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 21299 - 21363
Alignment:
Q  52 gattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||||||||||| ||| |||||||||| ||| |||||||| |||||| || |||||||||||    
T  21299 gattagcaattacagggacgaatttttaaacgacctctaattgcaaggactaatcacatcattaa 21363  T

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Target: scaffold0042 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 12138 - 12203
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||| | || ||||||||||||||||| |||||| |||||||||||||||||||||    
T  12138 ggattagcgattactgggattaatttttaaatgacgtttaattgcaaggacgaaacacatcattaa 12203  T

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Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 141662 - 141593
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    |||||||||||||||| ||| |||||||||||| |||||||||| |||| | |||||||||| |||||||    
T  141662 ggattagcaattacagggacgaatttttaaatgccgtctaattgcaagggctaaacacatcaataaacct 141593  T

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Target: scaffold0024; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 141923 - 141984
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||  |||||||||||| || ||||||| |||| | ||||||||||    
T  141923 ggattagcaattacagggatgaatttttaaatgccgcctaattgcaagggctaaacacatca 141984  T

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Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 222147 - 222212
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||| ||||||   |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  222147 ggattagcgattacatgtactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 222212  T

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Target: scaffold0006; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 221858 - 221791
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacc 119  Q
    |||||||| ||||||  ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  221858 ggattagcgattacaa-gactaatttttaaatgacgcctaattgcaagaacgaaacacatcattaaacc 221791  T

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Target: scaffold0006; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 222021 - 221975
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||| ||||||||||||||||  |||||||    
T  222021 gagaagaagatgaagacagggataaaaatgtcatttcaagaatggat 221975  T

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Target: scaffold0771 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 987 - 923
Alignment:
Q  52 gattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    ||||||| ||||||  ||||||||||||||||| | ||||||| |||||||||||||||||||||    
T  987 gattagcgattacatggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaa 923  T

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Target: scaffold0771; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 1211 - 1258
Alignment:
Q  69 actaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  1211 actaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 1258  T

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Target: scaffold0771; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 1114 - 1160
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||    
T  1114 gagaagaagatgaagacaagggtaaaaatgtcatttcacgaatggat 1160  T

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Target: scaffold0328 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 11207 - 11139
Alignment:
Q  52 gattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaaacct 120  Q
    ||||||| || |||| |||||||||||| |||||| ||||||| || ||||||||||||||||||||||    
T  11207 gattagcgatcacagagactaatttttagatgacgactaattgcaacgacgaaacacatcattaaacct 11139  T

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Target: scaffold0328; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 11334 - 11380
Alignment:
Q  8 gagatgaagatgaagacaggggtaaaaatgtcatttcaccaatggat 54  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  11334 gagaagaagatgaagacaggggtaaaaatgtcatttcacgaatggat 11380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 11498 - 11563
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 116  Q
    |||||| | ||||||  ||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  11498 ggattaacgattacatggactaatttttaaatgacgcctaattgcaaggatgaaacacatcattaa 11563  T

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Target: scaffold0559 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 1301 - 1240
Alignment:
Q  51 ggattagcaattacagtgactaatttttaaatgacgtctaattgtaaggacgaaacacatca 112  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| ||||   ||||||||||    
T  1301 ggattagcaattacagggacgaatttttaaatgccgcctaattgcaagggttaaacacatca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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