View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11278_low_10 (Length: 650)

Name: NF11278_low_10
Description: NF11278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11278_low_10
NF11278_low_10
[»] chr6 (92 HSPs)
chr6 (19-458)||(25512181-25512620)
chr6 (19-458)||(26057212-26057651)
chr6 (19-458)||(26077182-26077621)
chr6 (19-458)||(26144158-26144597)
chr6 (19-458)||(25484349-25484788)
chr6 (19-458)||(25581012-25581451)
chr6 (21-446)||(27215744-27216169)
chr6 (37-371)||(27529844-27530178)
chr6 (277-458)||(25546531-25546712)
chr6 (455-645)||(398597-398787)
chr6 (455-645)||(34948755-34948945)
chr6 (455-645)||(13837801-13837991)
chr6 (38-334)||(27426189-27426485)
chr6 (30-334)||(31285860-31286164)
chr6 (476-645)||(28996731-28996900)
chr6 (476-645)||(18339107-18339276)
chr6 (38-334)||(27717073-27717372)
chr6 (38-334)||(27609694-27609993)
chr6 (19-127)||(25539833-25539941)
chr6 (39-440)||(26862890-26863285)
chr6 (481-645)||(29743289-29743453)
chr6 (491-645)||(33229333-33229487)
chr6 (22-440)||(26647772-26648184)
chr6 (22-440)||(26753740-26754152)
chr6 (30-251)||(26885368-26885589)
chr6 (25-253)||(26803742-26803970)
chr6 (22-396)||(26624564-26624932)
chr6 (22-396)||(26730541-26730909)
chr6 (22-334)||(27697163-27697475)
chr6 (22-334)||(27704837-27705143)
chr6 (22-246)||(25491984-25492208)
chr6 (22-251)||(27680243-27680472)
chr6 (22-251)||(28787531-28787760)
chr6 (22-251)||(28793652-28793881)
chr6 (22-246)||(27603369-27603593)
chr6 (30-255)||(26657263-26657488)
chr6 (30-255)||(26763234-26763459)
chr6 (285-396)||(28787812-28787923)
chr6 (285-396)||(28793933-28794044)
chr6 (285-435)||(25491780-25491930)
chr6 (279-395)||(26637193-26637309)
chr6 (279-395)||(26743159-26743275)
chr6 (476-571)||(31028435-31028530)
chr6 (285-364)||(27680521-27680600)
chr6 (279-396)||(27591527-27591644)
chr6 (476-560)||(24697899-24697983)
chr6 (279-383)||(25075432-25075536)
chr6 (38-218)||(27591714-27591894)
chr6 (278-369)||(2186369-2186460)
chr6 (279-334)||(26850277-26850332)
chr6 (38-165)||(27676366-27676493)
chr6 (277-395)||(26885633-26885751)
chr6 (292-386)||(27603217-27603311)
chr6 (279-396)||(27676126-27676243)
chr6 (286-334)||(26804018-26804066)
chr6 (278-395)||(26951295-26951412)
chr6 (278-370)||(29827541-29827633)
chr6 (38-162)||(29842741-29842865)
chr6 (30-255)||(26825120-26825345)
chr6 (188-254)||(26938488-26938554)
chr6 (70-160)||(27663965-27664055)
chr6 (503-560)||(24695515-24695572)
chr6 (277-334)||(26657525-26657582)
chr6 (277-334)||(26763496-26763553)
chr6 (277-334)||(26825376-26825433)
chr6 (278-395)||(26960677-26960794)
chr6 (277-334)||(28141089-28141146)
chr6 (285-369)||(26978939-26979023)
chr6 (285-412)||(26938582-26938709)
chr6 (67-162)||(29827324-29827419)
chr6 (41-110)||(26951055-26951124)
chr6 (285-334)||(28150734-28150783)
chr6 (83-160)||(28244149-28244226)
chr6 (40-157)||(28326789-28326906)
chr6 (40-157)||(28504425-28504542)
chr6 (278-334)||(28097023-28097079)
chr6 (476-511)||(13647018-13647053)
chr6 (503-550)||(24072576-24072623)
chr6 (279-334)||(26813102-26813157)
chr6 (125-168)||(28097186-28097229)
chr6 (51-174)||(29469534-29469657)
chr6 (83-165)||(2186180-2186262)
chr6 (41-159)||(26636958-26637076)
chr6 (41-159)||(26742924-26743042)
chr6 (41-110)||(26960437-26960506)
chr6 (285-334)||(27663777-27663826)
chr6 (132-205)||(29695092-29695165)
chr6 (490-550)||(3050094-3050154)
chr6 (38-150)||(25075176-25075288)
chr6 (40-160)||(28186705-28186825)
chr6 (278-370)||(28186955-28187047)
chr6 (286-334)||(29842563-29842611)
[»] chr2 (24 HSPs)
chr2 (455-645)||(41251631-41251821)
chr2 (455-645)||(17445038-17445226)
chr2 (454-645)||(6403801-6403992)
chr2 (455-645)||(42439966-42440156)
chr2 (455-645)||(35962695-35962885)
chr2 (454-645)||(32127138-32127329)
chr2 (459-645)||(31581619-31581805)
chr2 (454-645)||(16405579-16405770)
chr2 (455-645)||(18981597-18981786)
chr2 (455-612)||(2958131-2958287)
chr2 (476-645)||(45418584-45418753)
chr2 (481-641)||(771005-771165)
chr2 (476-645)||(44084600-44084769)
chr2 (476-641)||(8147352-8147518)
chr2 (500-645)||(12756834-12756979)
chr2 (477-645)||(8059330-8059498)
chr2 (500-631)||(2285887-2286018)
chr2 (504-645)||(26162699-26162837)
chr2 (476-583)||(26237958-26238065)
chr2 (499-601)||(4555250-4555354)
chr2 (484-601)||(7072589-7072710)
chr2 (286-369)||(17991739-17991822)
chr2 (498-550)||(34905972-34906024)
chr2 (83-162)||(3281013-3281092)
[»] chr7 (21 HSPs)
chr7 (455-645)||(14777104-14777294)
chr7 (455-645)||(5555467-5555657)
chr7 (454-645)||(3114093-3114284)
chr7 (459-645)||(8394109-8394295)
chr7 (459-645)||(36630800-36630986)
chr7 (476-645)||(34389053-34389222)
chr7 (476-645)||(8867728-8867897)
chr7 (484-645)||(35090177-35090338)
chr7 (476-645)||(37002141-37002310)
chr7 (498-645)||(40920000-40920147)
chr7 (479-645)||(26624749-26624916)
chr7 (494-641)||(38638237-38638384)
chr7 (482-645)||(43184465-43184628)
chr7 (476-631)||(33685565-33685720)
chr7 (499-645)||(36658205-36658351)
chr7 (476-645)||(7002726-7002895)
chr7 (476-645)||(7048597-7048766)
chr7 (534-601)||(10868514-10868583)
chr7 (462-550)||(26502797-26502885)
chr7 (462-550)||(26589829-26589917)
chr7 (488-520)||(10876829-10876861)
[»] chr4 (52 HSPs)
chr4 (455-645)||(20129290-20129480)
chr4 (455-645)||(26439276-26439466)
chr4 (455-645)||(34407281-34407471)
chr4 (454-645)||(13012167-13012358)
chr4 (455-645)||(47500753-47500943)
chr4 (455-645)||(43355884-43356074)
chr4 (455-645)||(25930688-25930878)
chr4 (38-334)||(18075070-18075366)
chr4 (459-645)||(36382343-36382528)
chr4 (455-645)||(29319702-29319892)
chr4 (477-645)||(43143581-43143749)
chr4 (478-645)||(3292893-3293060)
chr4 (476-645)||(30216739-30216908)
chr4 (476-645)||(50205074-50205243)
chr4 (458-645)||(17511230-17511417)
chr4 (475-645)||(42333773-42333943)
chr4 (476-645)||(6690232-6690401)
chr4 (458-645)||(40528996-40529185)
chr4 (476-645)||(10352881-10353050)
chr4 (477-645)||(48989330-48989498)
chr4 (449-645)||(6235506-6235690)
chr4 (492-645)||(44156668-44156821)
chr4 (481-643)||(29995982-29996144)
chr4 (476-645)||(30077628-30077797)
chr4 (478-645)||(28877247-28877414)
chr4 (499-645)||(35545977-35546123)
chr4 (510-645)||(1817752-1817887)
chr4 (499-629)||(26448077-26448206)
chr4 (477-601)||(30109958-30110084)
chr4 (487-572)||(48129978-48130063)
chr4 (553-645)||(13392878-13392970)
chr4 (553-645)||(13396017-13396109)
chr4 (458-560)||(27363344-27363446)
chr4 (477-575)||(45194178-45194276)
chr4 (38-165)||(18698142-18698269)
chr4 (38-165)||(18730246-18730373)
chr4 (500-568)||(6254569-6254637)
chr4 (279-386)||(18678084-18678191)
chr4 (38-165)||(18678302-18678429)
chr4 (38-165)||(18722827-18722954)
chr4 (277-379)||(18730029-18730131)
chr4 (70-178)||(18688355-18688463)
chr4 (279-386)||(18654004-18654111)
chr4 (38-165)||(18654219-18654346)
chr4 (454-516)||(7769307-7769369)
chr4 (279-340)||(18697973-18698034)
chr4 (459-560)||(20113775-20113876)
chr4 (476-512)||(49908782-49908818)
chr4 (476-511)||(6212029-6212064)
chr4 (608-645)||(30110108-30110145)
chr4 (608-645)||(48130111-48130148)
chr4 (476-512)||(5517494-5517530)
[»] chr3 (22 HSPs)
chr3 (455-641)||(6269427-6269613)
chr3 (455-645)||(22968441-22968631)
chr3 (455-645)||(39771770-39771960)
chr3 (455-645)||(19390126-19390316)
chr3 (459-645)||(34084119-34084305)
chr3 (476-645)||(45182982-45183151)
chr3 (454-645)||(11018209-11018400)
chr3 (476-645)||(6930891-6931060)
chr3 (479-645)||(27935182-27935348)
chr3 (458-645)||(40081738-40081922)
chr3 (476-645)||(33040954-33041123)
chr3 (455-645)||(6503566-6503756)
chr3 (476-626)||(19565517-19565667)
chr3 (476-645)||(45335876-45336044)
chr3 (476-645)||(35514267-35514432)
chr3 (498-601)||(5135292-5135397)
chr3 (459-532)||(22922141-22922214)
chr3 (132-205)||(615199-615272)
chr3 (595-645)||(22922215-22922265)
chr3 (476-575)||(5354710-5354809)
chr3 (608-645)||(5135421-5135458)
chr3 (476-512)||(6890999-6891035)
[»] scaffold0069 (1 HSPs)
scaffold0069 (454-645)||(17821-18012)
[»] chr5 (25 HSPs)
chr5 (454-645)||(36293618-36293809)
chr5 (455-645)||(39434676-39434866)
chr5 (455-645)||(26283315-26283505)
chr5 (453-645)||(10033905-10034097)
chr5 (458-645)||(13817960-13818147)
chr5 (493-645)||(16155015-16155167)
chr5 (454-645)||(39657503-39657694)
chr5 (459-641)||(1776377-1776559)
chr5 (476-645)||(12278857-12279026)
chr5 (476-645)||(17332548-17332717)
chr5 (476-645)||(31680368-31680537)
chr5 (505-645)||(16333873-16334013)
chr5 (477-642)||(19985941-19986106)
chr5 (476-645)||(37254642-37254811)
chr5 (489-645)||(33430335-33430491)
chr5 (455-626)||(3155647-3155818)
chr5 (476-630)||(31501728-31501882)
chr5 (498-645)||(43068900-43069047)
chr5 (477-645)||(36291373-36291541)
chr5 (488-601)||(28801300-28801415)
chr5 (277-395)||(16692412-16692530)
chr5 (132-200)||(13717603-13717671)
chr5 (488-560)||(202652-202724)
chr5 (458-511)||(14316641-14316694)
chr5 (608-645)||(28801439-28801476)
[»] scaffold0002 (1 HSPs)
scaffold0002 (455-645)||(480454-480644)
[»] chr1 (18 HSPs)
chr1 (455-645)||(26144235-26144425)
chr1 (455-645)||(7433425-7433615)
chr1 (462-645)||(32982053-32982236)
chr1 (458-645)||(42310938-42311125)
chr1 (22-396)||(266861-267229)
chr1 (479-645)||(3828988-3829153)
chr1 (476-645)||(35907553-35907722)
chr1 (476-641)||(17445314-17445479)
chr1 (483-645)||(321374-321536)
chr1 (22-386)||(28126206-28126564)
chr1 (22-255)||(28132157-28132390)
chr1 (458-601)||(41972314-41972458)
chr1 (455-581)||(23313218-23313345)
chr1 (49-419)||(26137208-26137575)
chr1 (504-601)||(33489716-33489815)
chr1 (500-544)||(48901203-48901247)
chr1 (498-560)||(35951427-35951489)
chr1 (608-645)||(33489839-33489876)
[»] scaffold2142 (1 HSPs)
scaffold2142 (454-645)||(501-692)
[»] chr8 (19 HSPs)
chr8 (455-645)||(39914495-39914684)
chr8 (458-645)||(29728383-29728570)
chr8 (479-645)||(16788022-16788188)
chr8 (458-643)||(3648793-3648978)
chr8 (459-631)||(15838270-15838441)
chr8 (453-645)||(34136822-34137014)
chr8 (476-645)||(4404009-4404178)
chr8 (476-645)||(23402109-23402278)
chr8 (22-334)||(29272412-29272727)
chr8 (476-645)||(36408552-36408721)
chr8 (498-645)||(9877243-9877390)
chr8 (476-645)||(2729193-2729362)
chr8 (491-601)||(3435285-3435397)
chr8 (507-643)||(42230971-42231105)
chr8 (495-568)||(40470567-40470640)
chr8 (476-560)||(10397122-10397206)
chr8 (50-150)||(35984620-35984720)
chr8 (278-412)||(16371630-16371764)
chr8 (608-645)||(40470472-40470509)
[»] scaffold0003 (1 HSPs)
scaffold0003 (38-334)||(60878-61174)
[»] scaffold0502 (1 HSPs)
scaffold0502 (476-645)||(5231-5400)
[»] scaffold0154 (1 HSPs)
scaffold0154 (476-645)||(31481-31650)
[»] scaffold0349 (1 HSPs)
scaffold0349 (38-334)||(2113-2412)
[»] scaffold0041 (1 HSPs)
scaffold0041 (498-645)||(52948-53095)
[»] scaffold1870 (2 HSPs)
scaffold1870 (22-251)||(62-291)
scaffold1870 (275-396)||(330-451)
[»] scaffold0419 (2 HSPs)
scaffold0419 (22-251)||(8780-9009)
scaffold0419 (275-396)||(9048-9169)
[»] scaffold0277 (4 HSPs)
scaffold0277 (22-251)||(12335-12564)
scaffold0277 (22-251)||(3372-3601)
scaffold0277 (286-396)||(3215-3325)
scaffold0277 (286-396)||(12178-12288)
[»] scaffold0038 (1 HSPs)
scaffold0038 (83-160)||(44311-44388)


Alignment Details
Target: chr6 (Bit Score: 388; Significance: 0; HSPs: 92)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 19 - 458
Target Start/End: Original strand, 25512181 - 25512620
Alignment:
Q  19 aggtagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25512181 aggtagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaa 25512280  T
Q  119 ggatcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaa 218  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |   |||||||||||||||||||||||||||||||||||    
T  25512281 ggatcagagtgtctttctagacattgcttgttacttcaaagggtataaatggacaaaagtaaaaaaaatacttcatgctcattatggccattgcatagaa 25512380  T
Q  219 catcatgttggagtgttggctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaag 318  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  25512381 catcatgttggagtgttggctgaaaaatctctcataggccattgggaatatgacacttatgtgaccttacatgacttgatagaggacatgggtaaagaaa 25512480  T
Q  319 tcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaagagataatacggtaaggaaaac 418  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  25512481 ccgtccgacaagaatctcccaacaagcctggagaacgcagtaggttgtggtttcgcgatgatatacttaacgttttaagagataatacggtaagcaaaac 25512580  T
Q  419 taatatttatgaacaatttgttgttttagctttagccatg 458  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25512581 taatatttatgaacaatttgttgttttagctttagccatg 25512620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 19 - 458
Target Start/End: Original strand, 26057212 - 26057651
Alignment:
Q  19 aggtagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaa 118  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26057212 aggtagaagattgggagcgtatattagacgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaa 26057311  T
Q  119 ggatcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||  |||||||    
T  26057312 ggatcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaggttaaaaaaatacttcatgctcattatggccatcccatagaa 26057411  T
Q  219 catcatgttggagtgttggctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaag 318  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26057412 catcatgttggagtgttggctgaaaaatctctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaag 26057511  T
Q  319 tcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaagagataatacggtaaggaaaac 418  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26057512 tcgtccgacaagaatctcccaataagcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaagagataatacggtaaagaaaac 26057611  T
Q  419 taatatttatgaacaatttgttgttttagctttagccatg 458  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26057612 taatatttatgaacaatttgttgttttagctttagccatg 26057651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 19 - 458
Target Start/End: Original strand, 26077182 - 26077621
Alignment:
Q  19 aggtagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaa 118  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26077182 aggtagaagattgggagcgtatattagacgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaa 26077281  T
Q  119 ggatcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||  |||||||    
T  26077282 ggatcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaggttaaaaaaatacttcatgctcattatggccatcccatagaa 26077381  T
Q  219 catcatgttggagtgttggctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaag 318  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26077382 catcatgttggagtgttggctgaaaaatctctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaag 26077481  T
Q  319 tcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaagagataatacggtaaggaaaac 418  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26077482 tcgtccgacaagaatctcccaagaagcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaagagataatacggtaaagaaaac 26077581  T
Q  419 taatatttatgaacaatttgttgttttagctttagccatg 458  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26077582 taatatttatgaacaatttgttgttttagctttagccatg 26077621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 19 - 458
Target Start/End: Original strand, 26144158 - 26144597
Alignment:
Q  19 aggtagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaa 118  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26144158 aggtagaagattgggagcgtacattagacgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaa 26144257  T
Q  119 ggatcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaa 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||   |||||||||||||||||||||||||||||||||||    
T  26144258 ggatcagagtgtctttctagacattgcttgttgcttcaaagggtgtgaatggacaaaggttaaaaaaatacttcatgctcattatggccattgcatagaa 26144357  T
Q  219 catcatgttggagtgttggctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaag 318  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  26144358 catcatgttggagtgttggctgaaaaatctctcataggccattgggaatatgacacttatgtgaccttacatgacttgatagaggacatgggtaaagaaa 26144457  T
Q  319 tcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaagagataatacggtaaggaaaac 418  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  26144458 tcgtccgacaagaatctcccaacaagcctggagaacgcagtaggttgtggtttcccgatgatatagttaacgttttaagagataatacagtaaggaaaac 26144557  T
Q  419 taatatttatgaacaatttgttgttttagctttagccatg 458  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26144558 taatatttatgaacaatttgttgttttagctttagccatg 26144597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 19 - 458
Target Start/End: Original strand, 25484349 - 25484788
Alignment:
Q  19 aggtagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25484349 aggtagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaa 25484448  T
Q  119 ggatcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaa 218  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |   |||||||||||||||||||||||||||||||||||    
T  25484449 ggatcagagtgtctttctagacattgcttgttacttcaaagggtataaatggacaaaagtaaaaaaaatacttcatgctcattatggccattgcatagaa 25484548  T
Q  219 catcatgttggagtgttggctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaag 318  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25484549 catcatgttggagtgttggctgaaaaatgtctcataggtcattgggaatatgacacttatgtgaccttacatgacttgatagaggacatgggtaaagaag 25484648  T
Q  319 tcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaagagataatacggtaaggaaaac 418  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||    
T  25484649 tcgttcgacaagaatctcccaagaagcctggagaacgcagtaggttgtggtttcacgatgatatacttaacgttttaagagataatatggtaaggaaaac 25484748  T
Q  419 taatatttatgaacaatttgttgttttagctttagccatg 458  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  25484749 taatatttctgaacaatttgttgttttagctttagccatg 25484788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 19 - 458
Target Start/End: Original strand, 25581012 - 25581451
Alignment:
Q  19 aggtagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaa 118  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |   |||    
T  25581012 aggtagaagattggaagcgtatattagatgagtatgaaaatattcccaataaagatatccaaaggatacttcaagttagctatgatgctttggaaccaaa 25581111  T
Q  119 ggatcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaa 218  Q
    |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   |||||||||||||||||||||||||||||||||||    
T  25581112 ggagaagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaggttaaaaaaatacttcatgctcattatggccattgcatagaa 25581211  T
Q  219 catcatgttggagtgttggctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaag 318  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||     
T  25581212 catcatgttggagtgttggctgaaaaatctctcataggccattgggaatatgacactcagatgaccttacatgacttgatagaggacatgggtaaagaaa 25581311  T
Q  319 tcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaagagataatacggtaaggaaaac 418  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| ||||| |||||    
T  25581312 tcgtccgacaagaatctcccaagaaccctggagaacgcagtaggttgtggtttcacgatgatatatttgacgttttaagagataatacagtaagcaaaac 25581411  T
Q  419 taatatttatgaacaatttgttgttttagctttagccatg 458  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25581412 taatatttatgaacaatttgttgttttagctttagccatg 25581451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 21 - 446
Target Start/End: Original strand, 27215744 - 27216169
Alignment:
Q  21 gtagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagg 120  Q
    |||||||||||| | |||| |||||||||||||||||| |||||| ||||||| ||||||||||||||| |||| |||||||||||| || |||||||||    
T  27215744 gtagaagattgggaacgtatattagatgagtatgaaaagattcccaataaagagatccaaaggatacttaaagtcagctatgatgctctggaggaaaagg 27215843  T
Q  121 atcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaaca 220  Q
    |  |||||||||||||||||||||||||||||||||||||||||||||||||||| || |  || ||||||||||| |||||||||||||||||| ||||    
T  27215844 agaagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaggtcaaagatatacttcatgcccattatggccattgcataaaaca 27215943  T
Q  221 tcatgttggagtgttggctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtc 320  Q
    |||||||| ||||||||| ||||||| ||||||   |||  ||||| |||| | | || |||  |||||||||||||||||||| ||||||| ||||||     
T  27215944 tcatgttgaagtgttggccgaaaaatctctcattaaccaccgggaaaatgatagttatatgagattacatgacttgatagaggatatgggtagagaagtt 27216043  T
Q  321 gtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaagagataatacggtaaggaaaacta 420  Q
    |||||||||||||| ||| |||  ||||| |||||||||||||||||||||| ||||||||||||| | ||| ||| ||| ||||  || || |||| ||    
T  27216044 gtccgacaagaatcacccgacaatcctggggaacgcagtaggttgtggtttcacgatgatatagttcaagttctaaaagaaaatatcgtgagtaaaaata 27216143  T
Q  421 atatttatgaacaatttgttgtttta 446  Q
    |||||||||||||||||||| |||||    
T  27216144 atatttatgaacaatttgttatttta 27216169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 37 - 371
Target Start/End: Complemental strand, 27530178 - 27529844
Alignment:
Q  37 gtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttct 136  Q
    |||||||||||| ||||||| | |||||| ||||||| |||||||| |||||| |||| ||||||||| ||||| || || | || || |||||||||||    
T  27530178 gtacattagatgggtatgaagaaattcccaataaagagatccaaagaatacttaaagtgagctatgattctttggagaaagaagagcaaagtgtctttct 27530079  T
Q  137 agacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacatcatgttggagtgttg 236  Q
    |||||||||||||||||||||||||||||||||| || | || |  ||||||||||||||||||||||| |||||||||| ||||||||||| ||| |||    
T  27530078 agacattgcttgttgcttcaaagggtgtaaatggccagaggtcaaagaaatacttcatgctcattatggtcattgcatagtacatcatgttgcagttttg 27529979  T
Q  237 gctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctc 336  Q
    |||||||||| |||||| | ||||| | ||||||| | | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27529978 gctgaaaaatctctcatggaccatttgaaatatgatagttatgtgacattacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatcac 27529879  T
Q  337 ccaacaggcctggagaacgcagtaggttgtggttt 371  Q
    || |   ||||||||||||||||||||||||||||    
T  27529878 ccgatgagcctggagaacgcagtaggttgtggttt 27529844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 277 - 458
Target Start/End: Original strand, 25546531 - 25546712
Alignment:
Q  277 atgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcga 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25546531 atgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaagcctggagaacgcagtaggttgtggtttcgcga 25546630  T
Q  377 tgatatagttaacgttttaagagataatacggtaaggaaaactaatatttatgaacaatttgttgttttagctttagccatg 458  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25546631 tgatatagttaacgttttaagagataatacggtaagaaaaactaatatttatgaacaatttgttgttttagctttagccatg 25546712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 398597 - 398787
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  398597 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 398696  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  398697 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 398787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 455 - 645
Target Start/End: Complemental strand, 34948945 - 34948755
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||||||||| | |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34948945 catgggcggttctaccgtatggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 34948846  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||| | ||||| |||||    
T  34948845 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacgggttcatgtctct 34948755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 13837801 - 13837991
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||||||||| | ||||||||||||| |||| || | ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  13837801 catgggcggttctaccgtatggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacattta 13837900  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  13837901 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 13837991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 38 - 334
Target Start/End: Complemental strand, 27426485 - 27426189
Alignment:
Q  38 tacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttcta 137  Q
    ||||||||||  ||||||||| |||||| ||||||| |||||||| |||||| |||| ||||||||| ||||| ||||| |||| || ||||||||||||    
T  27426485 tacattagattggtatgaaaagattcccaataaagagatccaaagaatacttaaagtgagctatgattctttggaggaagaggagcaaagtgtctttcta 27426386  T
Q  138 gacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacatcatgttggagtgttgg 237  Q
    ||||||||||||||||||||||| |||||||||  ||| || |  ||||||||||||||||||||||| ||||||||| | |||||||||| |||| | |    
T  27426385 gacattgcttgttgcttcaaaggttgtaaatgggaaaaggtcaaagaaatacttcatgctcattatggtcattgcataaatcatcatgttgaagtgctag 27426286  T
Q  238 ctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
     ||||||||||||||| | |||||  ||||| || | ||||||| | |||||| ||||||||||| |||||||||||||| ||||||||| ||||||    
T  27426285 ttgaaaaatgtctcattgaccattttgaatacgatagtcatgtgtcattacataacttgatagagaacatgggtaaagaactcgtccgactagaatc 27426189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 30 - 334
Target Start/End: Original strand, 31285860 - 31286164
Alignment:
Q  30 tggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtg 129  Q
    |||||| |||||||||||| |||||| || |||||| ||||||| ||||||| ||||||| |||||||||||||||||||| | ||| |||| |||||||    
T  31285860 tggaagagtacattagatgggtatgacaagattcccaataaagagatccaaaagatacttaaagtaagctatgatgctttggaagaagaggagcagagtg 31285959  T
Q  130 tctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacatcatgttgg 229  Q
    ||||||| ||||||||||||||||||||||| ||   |||| |  | || |  || ||||| ||||||||||||||||||||||||  ||||||| | |     
T  31285960 tctttctggacattgcttgttgcttcaaaggatgcggatgggcggatgtcaaagatatactccatgctcattatggccattgcataacacatcatctaga 31286059  T
Q  230 agtgttggctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaa 329  Q
    ||||||||||||||||| |||||||| || ||||||||||||   |  ||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  31286060 agtgttggctgaaaaatctctcatagaccgttgggaatatgatggttgtgtgggattacatgacttgatagaggacatgggtaaagaagtcgtccgacaa 31286159  T
Q  330 gaatc 334  Q
    |||||    
T  31286160 gaatc 31286164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 28996731 - 28996900
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| | ||||||||| ||||||||||||||||||||||||    
T  28996731 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 28996830  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  28996831 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 28996900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 18339107 - 18339276
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| | ||||||| ||||||||| |||||||||||||| |||||||||    
T  18339107 gcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggcaa 18339206  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||| | |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  18339207 tctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 18339276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 38 - 334
Target Start/End: Complemental strand, 27717372 - 27717073
Alignment:
Q  38 tacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttcta 137  Q
    ||||||||||| |||||| |  |||||| ||||||| ||||||| ||||||| ||||||| |||||||||||| ||||| || | || ||||||||||||    
T  27717372 tacattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaagtaagttatgatgctttggaggaagagcagcaaagtgtctttcta 27717273  T
Q  138 gacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacatcatgttggagtgttgg 237  Q
    ||||||||||||||||||||| | |||||||||  | | |  |   | |||||| || ||||||||||||||||||||  ||||||| | ||||||||||    
T  27717272 gacattgcttgttgcttcaaaagatgtaaatgggaagatgccaaatatatacttaattctcattatggccattgcataacacatcatctaggagtgttgg 27717173  T
Q  238 ctgaaaaatgtctcat-aggccatt--gggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
     |||||||| |||||| | |  |||  |||||||||||  | ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27717172 ttgaaaaatctctcataaagaaattacgggaatatgacgattatgtgatgttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 27717073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 38 - 334
Target Start/End: Complemental strand, 27609993 - 27609694
Alignment:
Q  38 tacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttcta 137  Q
    ||||||||||| |||||| |  |||||| ||||||| ||||||| ||||||| |||| ||||||||| ||||| | ||| |||| || |||||||||||     
T  27609993 tacattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaagtgagctatgattctttggaagaagaggagcaaagtgtctttctg 27609894  T
Q  138 gacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacatcatgttggagtgttgg 237  Q
    ||||||||||||||||||||||| | ||| |||  | | |  | | | | ||||||| ||||||||||||||| ||||  ||||||| | ||||||||||    
T  27609893 gacattgcttgttgcttcaaaggatataattgggaagatgcaaagtatacacttcattctcattatggccattccataacacatcatctaggagtgttgg 27609794  T
Q  238 ctgaaaaatgtctcataggcca---ttgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
    ||||||||| |||||||| |||   ||||||||||  |  | ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27609793 ctgaaaaatctctcatagaccaatattgggaatatcgcgattatgtgatgttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 27609694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 25539833 - 25539941
Alignment:
Q  19 aggtagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25539833 aggtagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaa 25539932  T
Q  119 ggatcagag 127  Q
    |||||||||    
T  25539933 ggatcagag 25539941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 39 - 440
Target Start/End: Original strand, 26862890 - 26863285
Alignment:
Q  39 acattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctag 138  Q
    |||||||||| ||||||||| |||||| ||||||| ||||||||||||||| |||||||||||||||||||| | ||| || | || |||||||||||||    
T  26862890 acattagatgggtatgaaaagattcccaataaagagatccaaaggatacttaaagtaagctatgatgctttggaagaagagcagcaaagtgtctttctag 26862989  T
Q  139 acattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacatcatgttggagtgttggc 238  Q
    | ||||||||||| ||||||||| |||  |||| | || |    || |||||| |   |||||||||||  |||||| ||||||||||||||||||||||    
T  26862990 atattgcttgttgtttcaaagggggtagctggatagaattcgaagatatacttaaatatcattatggccgatgcataaaacatcatgttggagtgttggc 26863089  T
Q  239 tgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctccc 338  Q
    |||||||| |||||||  ||      ||||||    |  |||||  |||||||||||||||||||||||||| |||||| |||||||||||||||||||     
T  26863090 tgaaaaatctctcatatacc------aatatggtcttagtgtgagattacatgacttgatagaggacatgggcaaagaaatcgtccgacaagaatctcct 26863183  T
Q  339 aacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaagagataatacggtaaggaaaactaatatttatgaacaatttg 438  Q
    ||   ||| || ||||| |||||||| |||| ||  ||||||||| |  ||||||||  ||| || || || || || | | ||||||||||||||| ||    
T  26863184 aaagagccgggtgaacgaagtaggttatggtgtcatgatgatataatccacgttttagaagaaaacactgtgagtaagattgatatttatgaacaatctg 26863283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 481 - 645
Target Start/End: Original strand, 29743289 - 29743453
Alignment:
Q  481 cccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctga 580  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||  |||||||||||||||| |||||||||||||||||||||||    
T  29743289 cccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacagaaagaaaaatttgggcaatctga 29743388  T
Q  581 aaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||| | ||||| |||||||||| ||||||||||||||||||||| || | | |||||||||||    
T  29743389 aaattcttacacgcaaataggtctcggaattttatttagcacactagtgccggattcatctctct 29743453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 491 - 645
Target Start/End: Complemental strand, 33229487 - 33229333
Alignment:
Q  491 cgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcac 590  Q
    |||||| ||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| | ||    
T  33229487 cgcccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttac 33229388  T
Q  591 acgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||| |||| || ||||||||||||||||||||| | | |||||||||||    
T  33229387 acgtaaataagtctcgggattttatttagcacactattgccggattcatctctct 33229333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 22 - 440
Target Start/End: Original strand, 26647772 - 26648184
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| |||||| ||||||||||||  |||||||| |||||| ||||| | |||||   ||||||| |||||||||||||||||||| ||||| || |    
T  26647772 tagaagaatggaagggtacattagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagctatgatgctttggaggaagagca 26647871  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttag-ggaaatacttcatgctcattatggccattgcatagaaca 220  Q
     |||||||||||||||||||||||||||||||||||||| |||| ||||  |  |||| |  || ||||||| |  |||||||||||||||||||  |||    
T  26647872 gcagagtgtctttctagacattgcttgttgcttcaaaggatgtagatgg-gaggagtttgaagatatacttcgttatcattatggccattgcataacaca 26647970  T
Q  221 tcatgttggagtgttggctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtc 320  Q
    |||| ||||||||||||||||||||| ||||||      ||   || || |   | || |||  ||||||||||||||| ||||||||||||| |||||     
T  26647971 tcatcttggagtgttggctgaaaaatctctcat------ttaccaaaatcatggttatctgagattacatgacttgataaaggacatgggtaaggaagta 26648064  T
Q  321 gtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaagagataatacggtaaggaaaacta 420  Q
    |||||||||||||| |  ||   |||||||||||  |||||||| |||| ||  ||||| |||||| | ||||||| ||| || || || || || | ||    
T  26648065 gtccgacaagaatcacgtaaagagcctggagaacaaagtaggttatggtgtcaagatgaaatagttcatgttttaaaagaaaacactgtgagtaagatta 26648164  T
Q  421 atatttatgaacaatttgtt 440  Q
    |||| ||||| |||||||||    
T  26648165 atatctatgatcaatttgtt 26648184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 22 - 440
Target Start/End: Original strand, 26753740 - 26754152
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| |||||| ||||||||||||  |||||||| |||||| ||||| | |||||   ||||||| |||||||||||||||||||| ||||| || |    
T  26753740 tagaagaatggaagggtacattagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagctatgatgctttggaggaagagca 26753839  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttag-ggaaatacttcatgctcattatggccattgcatagaaca 220  Q
     |||||||||||||||||||||||||||||||||||||| |||| ||||  |  |||| |  || ||||||| |  |||||||||||||||||||  |||    
T  26753840 gcagagtgtctttctagacattgcttgttgcttcaaaggatgtagatgg-gaggagtttgaagatatacttcgttatcattatggccattgcataacaca 26753938  T
Q  221 tcatgttggagtgttggctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtc 320  Q
    |||| ||||||||||||||||||||| ||||||      ||   || || |   | || |||  ||||||||||||||| ||||||||||||| |||||     
T  26753939 tcatcttggagtgttggctgaaaaatctctcat------ttaccaaaatcatggttatctgagattacatgacttgataaaggacatgggtaaggaagta 26754032  T
Q  321 gtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaagagataatacggtaaggaaaacta 420  Q
    |||||||||||||| |  ||   |||||||||||  |||||||| |||| ||  ||||| |||||| | ||||||| ||| || || || || || | ||    
T  26754033 gtccgacaagaatcacgtaaagagcctggagaacaaagtaggttatggtgtcaagatgaaatagttcatgttttaaaagaaaacactgtgagtaagatta 26754132  T
Q  421 atatttatgaacaatttgtt 440  Q
    |||| ||||| |||||||||    
T  26754133 atatctatgatcaatttgtt 26754152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 30 - 251
Target Start/End: Original strand, 26885368 - 26885589
Alignment:
Q  30 tggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtg 129  Q
    |||||| ||||| ||||||  |||||||| |||||  ||| | | ||||||  ||||||| |||||||||||||||||||  ||||| |||| || ||||    
T  26885368 tggaagagtacactagatggatatgaaaagattcctaatacaaagatccaagagatacttaaagtaagctatgatgctttagaggaagaggagcaaagtg 26885467  T
Q  130 tctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacatcatgttgg 229  Q
    ||||||| || || |||||||||||||||||||||||||||||| | ||    || |||||||||||||||||||||||||||||| |||||||||||||    
T  26885468 tctttctggatatagcttgttgcttcaaagggtgtaaatggacagaggtcgaagatatacttcatgctcattatggccattgcataaaacatcatgttgg 26885567  T
Q  230 agtgttggctgaaaaatgtctc 251  Q
    ||||||||  ||||||| ||||    
T  26885568 agtgttggtcgaaaaatctctc 26885589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 25 - 253
Target Start/End: Original strand, 26803742 - 26803970
Alignment:
Q  25 aagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatca 124  Q
    |||| |||||| ||||||||||||  |||||||| |||||| ||||| | |||||   ||||||| |||||||||||||||||||| ||||| || | ||    
T  26803742 aagaatggaagggtacattagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagctatgatgctttggaggaagagcagca 26803841  T
Q  125 gagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttag-ggaaatacttcatgctcattatggccattgcatagaacatca 223  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||  |  |||| |  || |||||||||| |||||||||||||||||||  ||||||    
T  26803842 gagtgtctttctagacattgcttgttgcttcaaaggatgtggatgg-gaggagtttgaagatatacttcatgttcattatggccattgcataacacatca 26803940  T
Q  224 tgttggagtgttggctgaaaaatgtctcat 253  Q
    | | ||||||||||||||||||| ||||||    
T  26803941 tctaggagtgttggctgaaaaatctctcat 26803970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 22 - 396
Target Start/End: Original strand, 26624564 - 26624932
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| ||||||  ||||||||||| |||||| |  |||||| ||||||| ||||||| ||||||| |||| ||||||||||||||| | ||| ||||    
T  26624564 tagaagaatggaagtatacattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaagtgagctatgatgctttggaagaagagga 26624663  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttag-ggaaatacttcatgctcattatggccattgcatagaaca 220  Q
     ||||||||||||||||| |||||||||||||  ||||| |||  |||||    |||| |  || || |||| ||||||||||||||||||||||  |||    
T  26624664 gcagagtgtctttctagatattgcttgttgctcgaaaggatgtggatgga-gggagttcgaagatatgcttcgtgctcattatggccattgcataacaca 26624762  T
Q  221 tcatgttggagtgttggctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtc 320  Q
    |||| | |||||||||| ||| ||||||||||||      |   ||| | |   | || |||||||||||||||||||||||||||||||||||| | ||    
T  26624763 tcatctaggagtgttggttgacaaatgtctcata------tatcaatcttatggtgatatgaccttacatgacttgatagaggacatgggtaaagcaatc 26624856  T
Q  321 gtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaa 396  Q
    |||||||||||||| || ||   |||||||||||| ||||| || |||| ||  ||||||||| || | |||||||    
T  26624857 gtccgacaagaatcacctaaagagcctggagaacgaagtagattatggtgtcaagatgatatatttcatgttttaa 26624932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 22 - 396
Target Start/End: Original strand, 26730541 - 26730909
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| ||||||  ||||||||||| |||||| |  |||||| ||||||| ||||||| ||||||| |||| ||||||||||||||| | ||| ||||    
T  26730541 tagaagaatggaagtatacattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaagtgagctatgatgctttggaagaagagga 26730640  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttag-ggaaatacttcatgctcattatggccattgcatagaaca 220  Q
     ||||||||||||||||| |||||||||||||  ||||| |||  |||||    |||| |  || || |||| ||||||||||||||||||||||  |||    
T  26730641 gcagagtgtctttctagatattgcttgttgctcgaaaggatgtggatgga-gggagttcgaagatatgcttcgtgctcattatggccattgcataacaca 26730739  T
Q  221 tcatgttggagtgttggctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtc 320  Q
    |||| | |||||||||| ||| ||||||||||||      |   ||| | |   | || |||||||||||||||||||||||||||||||||||| | ||    
T  26730740 tcatctaggagtgttggttgacaaatgtctcata------tatcaatcttatggtgatatgaccttacatgacttgatagaggacatgggtaaagcaatc 26730833  T
Q  321 gtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaa 396  Q
    |||||||||||||| || ||   |||||||||||| ||||| || |||| ||  ||||||||| || | |||||||    
T  26730834 gtccgacaagaatcacctaaagagcctggagaacgaagtagattatggtgtcaagatgatatatttcatgttttaa 26730909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 22 - 334
Target Start/End: Complemental strand, 27697475 - 27697163
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| ||||||  || |||||||| |||||| |  |||||| ||||||| ||||||| |||||||  ||| ||||||||||||||| | ||| ||||    
T  27697475 tagaagaatggaagtatatattagatgggtatgacaggattcccaataaagagatccaaaagatacttagagtgagctatgatgctttggaagaagagga 27697376  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacat 221  Q
     || ||||||||||| |||||||||||||||||||||||   |  ||||  | | |  |   | || |||||||||||||||||||||| ||||  ||||    
T  27697375 gcaaagtgtctttctggacattgcttgttgcttcaaaggacatggatgggaagatgccaaatatatgcttcatgctcattatggccattccataacacat 27697276  T
Q  222 catgttggagtgttggctgaaaaatgtctcataggcc---attgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaag 318  Q
    ||| | | ||||||||||||||||| |||||||  ||   || |||||||||    |  |||||| ||||||||||||||||||||||||||||||||||    
T  27697275 catctagcagtgttggctgaaaaatctctcataaaccaatatagggaatatg---gttgtgtgacattacatgacttgatagaggacatgggtaaagaag 27697179  T
Q  319 tcgtccgacaagaatc 334  Q
    ||||||||||||||||    
T  27697178 tcgtccgacaagaatc 27697163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 22 - 334
Target Start/End: Complemental strand, 27705143 - 27704837
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| ||||||  ||||||||||| |||||| |  |||||| ||||||| ||||||| |||||||  ||| ||||||||||||||| | ||| ||||    
T  27705143 tagaagaatggaagaatacattagatgggtatgacaggattcccaataaagagatccaaaagatacttagagtgagctatgatgctttggaagaagagga 27705044  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacat 221  Q
     |||||||||||||| ||||||||||||||||| ||||||| || || |||| | |||    | ||||||||| ||||||||| |||||| |||  ||||    
T  27705043 gcagagtgtctttcttgacattgcttgttgcttaaaagggtatagattgacagaggttgaaaatatacttcattctcattatgaccattgtataacacat 27704944  T
Q  222 catgttggagtgttggctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtcg 321  Q
    ||| |  |||||||||||||||| |  ||||||| |        | || |   | ||||||| |||||| ||||||||||||| ||||||||||||||||    
T  27704943 catctacgagtgttggctgaaaagtcactcatagac------acaaattattgttatgtgacattacataacttgatagaggatatgggtaaagaagtcg 27704850  T
Q  322 tccgacaagaatc 334  Q
    |||||||||||||    
T  27704849 tccgacaagaatc 27704837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 22 - 246
Target Start/End: Complemental strand, 25492208 - 25491984
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| |||||| |||||||||||||||||||||| |||  | ||||||| ||||||| |||||||  ||| ||||||||||||||| ||||||||||    
T  25492208 tagaagaatggaagtgtacattagatgagtatgaaaagattttcaataaagagatccaaaagatacttagagtgagctatgatgctttggaggaaaagga 25492109  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacat 221  Q
     |||||| |||||||||||||  |||||| ||||||||| || |||||| |  | || |   | |||||||||| |||||||||||||||| || |  ||    
T  25492108 gcagagtatctttctagacatgacttgtttcttcaaaggttggaaatgggcggatgtcaaaaatatacttcatgatcattatggccattgcgtaaactat 25492009  T
Q  222 catgttggagtgttggctgaaaaat 246  Q
    ||| |||||  ||||||| ||||||    
T  25492008 catcttggaaagttggctaaaaaat 25491984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 27680243 - 27680472
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||||||||||| ||||||||||| |||||| |  |||||| ||||||| ||||||| ||||||| | || ||||||||||||||| | ||| ||||    
T  27680243 tagaagattggaagcatacattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaggtgagctatgatgctttggaagaagagga 27680342  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttag-ggaaatacttcatgctcattatggccattgcatagaaca 220  Q
     |||||||||||||| ||||| ||||| ||||||||||| | | |||||| |  |||| |  || ||||||  ||||||||||| ||||||||||  |||    
T  27680343 gcagagtgtctttcttgacatcgcttgctgcttcaaaggatatcaatgga-aggagttcgaagatatactttgtgctcattatgaccattgcataacaca 27680441  T
Q  221 tcatgttggagtgttggctgaaaaatgtctc 251  Q
    |||| | ||||||||||||| ||||| ||||    
T  27680442 tcatctaggagtgttggctggaaaatctctc 27680472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 28787531 - 28787760
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| |||||| |||| |||||||  |||||||| |||||| ||||| | |||||   ||||||| |||||||||||||||||||| ||||| || |    
T  28787531 tagaagaatggaagggtactttagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagctatgatgctttggaggaagagca 28787630  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttag-ggaaatacttcatgctcattatggccattgcatagaaca 220  Q
     || ||||| |||||||||||||| |||||||||||||| ||| | |||  |  |||| |  || ||||||| ||||||||||||||||||||||  |||    
T  28787631 acaaagtgtttttctagacattgcatgttgcttcaaaggatgtgagtgg-gaggagtttgaagatatacttcgtgctcattatggccattgcataacaca 28787729  T
Q  221 tcatgttggagtgttggctgaaaaatgtctc 251  Q
    |||| | ||||||||||||||||||| ||||    
T  28787730 tcatctaggagtgttggctgaaaaatctctc 28787760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 28793652 - 28793881
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| |||||| |||| |||||||  |||||||| |||||| ||||| | |||||   ||||||| |||||||||||||||||||| ||||| || |    
T  28793652 tagaagaatggaagggtactttagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagctatgatgctttggaggaagagca 28793751  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttag-ggaaatacttcatgctcattatggccattgcatagaaca 220  Q
     || ||||| |||||||||||||| |||||||||||||| ||| | |||  |  |||| |  || ||||||| ||||||||||||||||||||||  |||    
T  28793752 acaaagtgtttttctagacattgcatgttgcttcaaaggatgtgagtgg-gaggagtttgaagatatacttcgtgctcattatggccattgcataacaca 28793850  T
Q  221 tcatgttggagtgttggctgaaaaatgtctc 251  Q
    |||| | ||||||||||||||||||| ||||    
T  28793851 tcatctaggagtgttggctgaaaaatctctc 28793881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 22 - 246
Target Start/End: Complemental strand, 27603593 - 27603369
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| |||||| |||| ||||| |  ||||| || |||||| ||||| | |||||   ||| ||| |||||||||||||||||||| ||||| || |    
T  27603593 tagaagaatggaagggtacgttagaaggatatgagaagattcccaataaaaagatccacgagattcttaaagtaagctatgatgctttggaggaagagca 27603494  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacat 221  Q
     |||||||||||||||||||||||||||||||||||||| |||  || |  |   |||   || ||||||| ||||||||||||||||||||||  ||||    
T  27603493 gcagagtgtctttctagacattgcttgttgcttcaaaggatgtggattggaagtggttgaagatatacttcgtgctcattatggccattgcataacacat 27603394  T
Q  222 catgttggagtgttggctgaaaaat 246  Q
    ||| | |||||||||||||||||||    
T  27603393 catctaggagtgttggctgaaaaat 27603369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 30 - 255
Target Start/End: Original strand, 26657263 - 26657488
Alignment:
Q  30 tggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtg 129  Q
    |||||| ||||||||||||  |||||||| |||||| ||||| | || |||  ||||||| ||||||||||||||| |||| ||||| |||| || ||||    
T  26657263 tggaagagtacattagatggatatgaaaagattcccaataaaaagattcaagagatacttaaagtaagctatgatgatttggaggaagaggagcaaagtg 26657362  T
Q  130 tctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacatcatgttgg 229  Q
    ||||| |||| || |||||||  |||||||| |||| || ||   | ||    || | ||||| |||||| ||||| ||||||||| |||||||||||||    
T  26657363 tctttttagatatagcttgttttttcaaaggatgtagattgagtgaggtcgaagagacacttcttgctcactatggtcattgcataaaacatcatgttgg 26657462  T
Q  230 agtgttggctgaaaaatgtctcatag 255  Q
    |||||||| |||||||| ||||||||    
T  26657463 agtgttggttgaaaaatctctcatag 26657488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 30 - 255
Target Start/End: Original strand, 26763234 - 26763459
Alignment:
Q  30 tggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtg 129  Q
    |||||| ||||||||||||  |||||||| |||||| ||||| | || |||  ||||||| ||||||||||||||| |||| ||||| |||| || ||||    
T  26763234 tggaagagtacattagatggatatgaaaagattcccaataaaaagattcaagagatacttaaagtaagctatgatgatttggaggaagaggagcaaagtg 26763333  T
Q  130 tctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacatcatgttgg 229  Q
    ||||| |||| || |||||||  |||||||| |||| || ||   | ||    || | ||||| |||||| ||||| ||||||||| |||||||||||||    
T  26763334 tctttttagatatagcttgttttttcaaaggatgtagattgagtgaggtcgaagagacacttcttgctcactatggtcattgcataaaacatcatgttgg 26763433  T
Q  230 agtgttggctgaaaaatgtctcatag 255  Q
    |||||||| |||||||| ||||||||    
T  26763434 agtgttggttgaaaaatctctcatag 26763459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 285 - 396
Target Start/End: Original strand, 28787812 - 28787923
Alignment:
Q  285 ttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatag 384  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||   |||||||||| | |||||||| |||| ||  ||||||||||    
T  28787812 ttacatgacttgatagaagacatgggtaaagaagtcgtccgacaagaatcgcctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatag 28787911  T
Q  385 ttaacgttttaa 396  Q
    |||| |||||||    
T  28787912 ttaatgttttaa 28787923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 285 - 396
Target Start/End: Original strand, 28793933 - 28794044
Alignment:
Q  285 ttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatag 384  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||   |||||||||| | |||||||| |||| ||  ||||||||||    
T  28793933 ttacatgacttgatagaagacatgggtaaagaagtcgtccgacaagaatcgcctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatag 28794032  T
Q  385 ttaacgttttaa 396  Q
    |||| |||||||    
T  28794033 ttaatgttttaa 28794044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 285 - 435
Target Start/End: Complemental strand, 25491930 - 25491780
Alignment:
Q  285 ttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatag 384  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||||||||| |  ||    ||||||||||| ||||||||||||| || ||||||||| |    
T  25491930 ttacataacttgatagagcacatgggtaaagaagtcgttcgacaagaatcacgtaatgatcctggagaacgtagtaggttgtggtgtcccgatgatatgg 25491831  T
Q  385 ttaacgttttaagagataatacggtaaggaaaactaatatttatgaacaat 435  Q
    || | ||||||||||| || |||||||| || | | |||| ||||||||||    
T  25491830 ttcaagttttaagagaaaacacggtaagtaagattgatatctatgaacaat 25491780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 279 - 395
Target Start/End: Original strand, 26637193 - 26637309
Alignment:
Q  279 gtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatg 378  Q
    ||||| |||||||||||||||||||| ||||||| |||| |||||||||||||||| |  || | |||||||||||||||||||||||||| ||  || |    
T  26637193 gtgacattacatgacttgatagaggatatgggtatagaaatcgtccgacaagaatcacgtaataagcctggagaacgcagtaggttgtggtgtcatgacg 26637292  T
Q  379 atatagttaacgtttta 395  Q
    |||||||| | ||||||    
T  26637293 atatagttcatgtttta 26637309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 279 - 395
Target Start/End: Original strand, 26743159 - 26743275
Alignment:
Q  279 gtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatg 378  Q
    ||||| |||||||||||||||||||| ||||||| |||| |||||||||||||||| |  || | |||||||||||||||||||||||||| ||  || |    
T  26743159 gtgacattacatgacttgatagaggatatgggtatagaaatcgtccgacaagaatcacgtaataagcctggagaacgcagtaggttgtggtgtcatgacg 26743258  T
Q  379 atatagttaacgtttta 395  Q
    |||||||| | ||||||    
T  26743259 atatagttcatgtttta 26743275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 476 - 571
Target Start/End: Complemental strand, 31028530 - 31028435
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgg 571  Q
    ||||||||| ||||| |||||  |||||||||||||||||||||||||||  ||||| |||||| ||||||||||||||||||||| ||| |||||    
T  31028530 gcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaaggaaattttgg 31028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 285 - 364
Target Start/End: Original strand, 27680521 - 27680600
Alignment:
Q  285 ttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggtt 364  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| || ||   |||||||||||| ||||||||    
T  27680521 ttacatgacttgataaaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaacgaagtaggtt 27680600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 279 - 396
Target Start/End: Complemental strand, 27591644 - 27591527
Alignment:
Q  279 gtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatg 378  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||| || ||   |||||||||| | || ||||| |||| ||  ||||    
T  27591644 gtgacattacatgaattgatagaggtcatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagcaggttatggtctcaagatg 27591545  T
Q  379 atatagttaacgttttaa 396  Q
    |||||||| | |||||||    
T  27591544 atatagttcatgttttaa 27591527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 476 - 560
Target Start/End: Complemental strand, 24697983 - 24697899
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaa 560  Q
    |||||||||| |  ||||||| |||| ||||||||||||| |||||||| | ||||||||||||||||||||||| |||||||||    
T  24697983 gcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaaaa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 279 - 383
Target Start/End: Original strand, 25075432 - 25075536
Alignment:
Q  279 gtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatg 378  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||||||| |||||    ||   |||||||||||| ||||||||||||| || |||||    
T  25075432 gtgacattacatgacttgttagaggacatgggtaaagaaatcgtccgacatgaatcaattaaagagcctggagaacgtagtaggttgtggtatcacgatg 25075531  T
Q  379 atata 383  Q
    |||||    
T  25075532 atata 25075536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 38 - 218
Target Start/End: Complemental strand, 27591894 - 27591714
Alignment:
Q  38 tacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttcta 137  Q
    |||||||||| |||||| ||  |||||  ||||||||||||||| |||||||  | | ||||||||||||||| | ||| |||| |||||||||||| |     
T  27591894 tacattagataagtatggaagaattccacataaagatatccaaaagatacttagactcagctatgatgctttggaagaagaggagcagagtgtctttttg 27591795  T
Q  138 gacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaa 218  Q
    || |||||||||||| ||||||| |||| || |   ||||| |   | ||||||||||||||||||||  ||| |||||||    
T  27591794 gatattgcttgttgcatcaaaggatgtagattggagaaagtcaaacagatacttcatgctcattatggttattccatagaa 27591714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 278 - 369
Target Start/End: Original strand, 2186369 - 2186460
Alignment:
Q  278 tgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggt 369  Q
    |||||| |||||||||||||||||||| |||||||||||| |||| ||||||||||| || ||   ||||||| |||| |||||||||||||    
T  2186369 tgtgacattacatgacttgatagaggaaatgggtaaagaaatcgtacgacaagaatcaccaaaagagcctggaaaacgtagtaggttgtggt 2186460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 26850277 - 26850332
Alignment:
Q  279 gtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26850277 gtgacattacatgacttgatagaggacatgggtaaagaaatcgtccgacaagaatc 26850332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 38 - 165
Target Start/End: Complemental strand, 27676493 - 27676366
Alignment:
Q  38 tacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttcta 137  Q
    |||||||||| |||||| ||  |||||  ||||||||||||||| |||||||  | | ||||||||||||||| | ||| |||| |||||||||||| |     
T  27676493 tacattagataagtatggaagaattccacataaagatatccaaaagatacttagactgagctatgatgctttggacgaagaggagcagagtgtctttttg 27676394  T
Q  138 gacattgcttgttgcttcaaagggtgta 165  Q
    || |||||||||||| ||||||| ||||    
T  27676393 gatattgcttgttgcatcaaaggatgta 27676366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 277 - 395
Target Start/End: Original strand, 26885633 - 26885751
Alignment:
Q  277 atgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcga 376  Q
    ||||||| |||||||||||| |||||||||||||||||||| |||| || ||||||||    ||   |||||||||||| |||||||| |||| || |||    
T  26885633 atgtgacattacatgacttggtagaggacatgggtaaagaaatcgttcggcaagaatcaagtaaagagcctggagaacgtagtaggttatggtgtcacga 26885732  T
Q  377 tgatatagttaacgtttta 395  Q
    |||||||||| | ||||||    
T  26885733 tgatatagttcatgtttta 26885751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 27603311 - 27603217
Alignment:
Q  292 acttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagtt 386  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||   |||||||||| | |||||||| |||| ||  || |||||||||    
T  27603311 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagacgatatagtt 27603217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 279 - 396
Target Start/End: Complemental strand, 27676243 - 27676126
Alignment:
Q  279 gtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatg 378  Q
    ||||| |||||||| |||||||||| ||||||||||||||| |||||||||||||| || ||   |||||||||| | || ||||| |||| ||  ||||    
T  27676243 gtgacattacatgaattgatagaggtcatgggtaaagaagtggtccgacaagaatcacctaaagagcctggagaaagaagcaggttatggtctcaagatg 27676144  T
Q  379 atatagttaacgttttaa 396  Q
    |||||||| | |||||||    
T  27676143 atatagttcatgttttaa 27676126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 26804018 - 26804066
Alignment:
Q  286 tacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26804018 tacatgacttgataaaggacatgggtaaagaagtcgtccgacaagaatc 26804066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 278 - 395
Target Start/End: Original strand, 26951295 - 26951412
Alignment:
Q  278 tgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgat 377  Q
    |||||| |||||||||||||||||||| ||||||| |||| || |||||||||||||    |     ||||||||||||||||||||||||| ||| |||    
T  26951295 tgtgacattacatgacttgatagaggatatgggtatagaaatcatccgacaagaatcaattagagaacctggagaacgcagtaggttgtggtctcgtgat 26951394  T
Q  378 gatatagttaacgtttta 395  Q
    ||||| ||| | ||||||    
T  26951395 gatattgttcatgtttta 26951412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 278 - 370
Target Start/End: Original strand, 29827541 - 29827633
Alignment:
Q  278 tgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtt 370  Q
    |||||| ||||||||||||||||| ||||||||||||||| | || ||||||||||| || ||   ||||||| | || ||||||||||||||    
T  29827541 tgtgacattacatgacttgatagaagacatgggtaaagaaattgtacgacaagaatcaccgaaagagcctggaaagcgtagtaggttgtggtt 29827633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 38 - 162
Target Start/End: Complemental strand, 29842865 - 29842741
Alignment:
Q  38 tacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttcta 137  Q
    ||||||||||  ||||||||  |||||  ||||||| ||||| |  |||||| || |||||| |||||||||| ||||| | || ||  |||| |||||     
T  29842865 tacattagataggtatgaaaggattcctaataaagagatccacaatatacttaaaataagctttgatgctttggaggaagacgaacaaggtgtttttctc 29842766  T
Q  138 gacattgcttgttgcttcaaagggt 162  Q
    |||||||||||||||||||||||||    
T  29842765 gacattgcttgttgcttcaaagggt 29842741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 255
Target Start/End: Original strand, 26825120 - 26825345
Alignment:
Q  30 tggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtg 129  Q
    |||||| || |||||||||  |||||||  ||||| || ||| | ||||||  |||||||  ||||||||||||||||||| | ||| || | || ||||    
T  26825120 tggaagggtgcattagatggatatgaaaggattcctgacaaaaagatccaagagatacttagagtaagctatgatgctttggaagaagagcaacaaagtg 26825219  T
Q  130 tctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttag-ggaaatacttcatgctcattatggccattgcatagaacatcatgttg 228  Q
    | || || ||||||||||||||||||||||    ||  |||  |  |||| |  || ||||||| | ||||||| |||||||||||| |||||||||||     
T  26825220 ttttcctcgacattgcttgttgcttcaaagaacatagttgg-gaggagttcgaagatatacttcgtactcattacggccattgcataaaacatcatgttc 26825318  T
Q  229 gagtgttggctgaaaaatgtctcatag 255  Q
     ||||||||| ||||||| ||||||||    
T  26825319 aagtgttggcagaaaaatctctcatag 26825345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 26938488 - 26938554
Alignment:
Q  188 acttcatgctcattatggccattgcatagaacatcatgttggagtgttggctgaaaaatgtctcata 254  Q
    |||||||||||||||||| ||||||||| || |||||||||||||||||| | | |||| |||||||    
T  26938488 acttcatgctcattatggtcattgcataaaaaatcatgttggagtgttggttaataaatctctcata 26938554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 27664055 - 27663965
Alignment:
Q  70 aagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctagacattgcttgttgcttcaaagg 160  Q
    |||||||||||| ||||||| ||||||||| |||| ||||| | ||| |  | |||||||||||| | || ||||||||||||||||||||    
T  27664055 aagatatccaaaagatacttaaagtaagctttgatactttggaagaagaacaacagagtgtctttttggatattgcttgttgcttcaaagg 27663965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 560
Target Start/End: Original strand, 24695515 - 24695572
Alignment:
Q  503 atcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaa 560  Q
    |||||| ||||||  ||||||| ||||||||||||||||||||||||| |||||||||    
T  24695515 atcgatcattttttaacattaggctcaacccaaaagcccattaacacacttacaaaaa 24695572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 26657525 - 26657582
Alignment:
Q  277 atgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
    ||||| | ||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  26657525 atgtggcattacacgatttgatagaggacatgggtaaagaaatcgtccgacaagaatc 26657582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 26763496 - 26763553
Alignment:
Q  277 atgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
    ||||| | ||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  26763496 atgtggcattacacgatttgatagaggacatgggtaaagaaatcgtccgacaagaatc 26763553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 26825376 - 26825433
Alignment:
Q  277 atgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
    ||||||| ||||||||||||||| |||||||||| |||||||| ||||||||| ||||    
T  26825376 atgtgacattacatgacttgataaaggacatgggcaaagaagtagtccgacaacaatc 26825433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 278 - 395
Target Start/End: Original strand, 26960677 - 26960794
Alignment:
Q  278 tgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgat 377  Q
    |||||| |||||||||||||||||||| |||||||  ||| | || ||||| |||||    ||   ||||||| |||||||||||||||||| ||| |||    
T  26960677 tgtgacattacatgacttgatagaggatatgggtatggaaattgttcgacaggaatcaattaaagagcctggaaaacgcagtaggttgtggtgtcgtgat 26960776  T
Q  378 gatatagttaacgtttta 395  Q
    ||||||||| | ||||||    
T  26960777 gatatagttcatgtttta 26960794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 28141089 - 28141146
Alignment:
Q  277 atgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
    ||||||| |||||||||||||||||||| |||||||||||| | || |||||||||||    
T  28141089 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatc 28141146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 285 - 369
Target Start/End: Original strand, 26978939 - 26979023
Alignment:
Q  285 ttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggt 369  Q
    |||||| ||||||||||||| ||||||| |||| ||||||||||||||||    ||    |||||||||||||||||||||||||    
T  26978939 ttacattacttgatagaggatatgggtatagaaatcgtccgacaagaatcaattaaagaacctggagaacgcagtaggttgtggt 26979023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 285 - 412
Target Start/End: Original strand, 26938582 - 26938709
Alignment:
Q  285 ttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatag 384  Q
    |||||||||||||| |||||||||||||||||| | ||  ||||||||||   |||   | |||||||||||| ||| |||||||||  | | |||||||    
T  26938582 ttacatgacttgattgaggacatgggtaaagaaattgttagacaagaatcagtcaaagaggctggagaacgcactagattgtggtttgacaaagatatag 26938681  T
Q  385 ttaacgttttaagagataatacggtaag 412  Q
    || | || |||| ||| |||||||||||    
T  26938682 ttcatgtattaaaagaaaatacggtaag 26938709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 67 - 162
Target Start/End: Original strand, 29827324 - 29827419
Alignment:
Q  67 ataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctagacattgcttgttgcttcaaagggt 162  Q
    ||||||| |||||||  |||||| || |||| | |||||||||| ||||| | || ||  |||| ||||| |||||||||||||||||||||||||    
T  29827324 ataaagagatccaaaatatacttaaaataagttttgatgctttggaggaagatgaacaaggtgtttttctcgacattgcttgttgcttcaaagggt 29827419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 26951055 - 26951124
Alignment:
Q  41 attagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttg 110  Q
    ||||||| |||||||||  |||||  || |||||||||||| ||||||| ||||||||| ||||||||||    
T  26951055 attagataagtatgaaagaattccacatgaagatatccaaaagatacttaaagtaagctttgatgctttg 26951124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 285 - 334
Target Start/End: Original strand, 28150734 - 28150783
Alignment:
Q  285 ttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
    ||||||||||||||||| ||||||||||||||| | || |||||||||||    
T  28150734 ttacatgacttgatagaagacatgggtaaagaaattgtacgacaagaatc 28150783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 28244149 - 28244226
Alignment:
Q  83 gatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctagacattgcttgttgcttcaaagg 160  Q
    ||||||| ||||||||| |||||||||| || || | || |||| ||| ||||| ||||||||||| |||||||||||    
T  28244149 gatacttaaagtaagctttgatgctttggagaaagatgagcagaatgtttttctcgacattgcttgctgcttcaaagg 28244226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 40 - 157
Target Start/End: Original strand, 28326789 - 28326906
Alignment:
Q  40 cattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctaga 139  Q
    ||||| || |||||||||  ||||||  |||| | ||||||  ||||||| ||||||||| |||||||||| | ||| | || |||| ||| ||||| ||    
T  28326789 cattatatcagtatgaaaggattcccattaaaaagatccaagcgatacttaaagtaagctttgatgctttggatgaagatgagcagaatgtttttctcga 28326888  T
Q  140 cattgcttgttgcttcaa 157  Q
    ||||||||| ||||||||    
T  28326889 cattgcttgctgcttcaa 28326906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 40 - 157
Target Start/End: Original strand, 28504425 - 28504542
Alignment:
Q  40 cattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctaga 139  Q
    ||||| || |||||||||  ||||||  |||| | ||||||  ||||||| ||||||||| |||||||||| | ||| | || |||| ||| ||||| ||    
T  28504425 cattatatcagtatgaaaggattcccattaaaaagatccaagcgatacttaaagtaagctttgatgctttggatgaagatgagcagaatgtttttctcga 28504524  T
Q  140 cattgcttgttgcttcaa 157  Q
    ||||||||| ||||||||    
T  28504525 cattgcttgctgcttcaa 28504542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 28097079 - 28097023
Alignment:
Q  278 tgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
    |||||| ||||||||||||||||| ||||||||||||||| | ||  ||||||||||    
T  28097079 tgtgacattacatgacttgatagaagacatgggtaaagaaattgtaagacaagaatc 28097023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 511
Target Start/End: Original strand, 13647018 - 13647053
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataat 511  Q
    ||||||||||||||||||||| ||||||||||||||    
T  13647018 gcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 550
Target Start/End: Original strand, 24072576 - 24072623
Alignment:
Q  503 atcgataatttttgcacattagactcaacccaaaagcccattaacaca 550  Q
    |||||||||||||||||||||||   ||||||||| ||||||||||||    
T  24072576 atcgataatttttgcacattagatcgaacccaaaaacccattaacaca 24072623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 26813102 - 26813157
Alignment:
Q  279 gtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
    ||||| |||||||||||||||||| ||| |||||||||| | |||| |||||||||    
T  26813102 gtgacattacatgacttgatagagcacacgggtaaagaaattgtccaacaagaatc 26813157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 28097229 - 28097186
Alignment:
Q  125 gagtgtctttctagacattgcttgttgcttcaaagggtgtaaat 168  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||    
T  28097229 gagtgtttttctcgacattgcttgttgcttcaaagggtataaat 28097186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 29469534 - 29469657
Alignment:
Q  51 tatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctagacattgcttgtt 150  Q
    |||||||  ||||| |||||| | ||||||| |||||| ||| | |||| |||||||||| ||||| | ||  ||  ||| ||||| |||||||| || |    
T  29469534 tatgaaaggattcctgataaaaagatccaaacgatactacaacttagctttgatgctttgcaggaagaagagaagtctgtttttcttgacattgcctgct 29469633  T
Q  151 gcttcaaagggtgtaaatggacaa 174  Q
    |||||||||| | |||||||||||    
T  29469634 gcttcaaaggatataaatggacaa 29469657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 2186180 - 2186262
Alignment:
Q  83 gatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctagacattgcttgttgcttcaaagggtgta 165  Q
    ||||||| |||| |||| |||||||||| ||||  | ||| ||||| ||||||| |||||||||||||  |||||||| ||||    
T  2186180 gatacttaaagtcagctttgatgctttgcaggaggaagataagagtctctttctcgacattgcttgttttttcaaaggatgta 2186262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 159
Target Start/End: Original strand, 26636958 - 26637076
Alignment:
Q  41 attagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctagac 140  Q
    ||||||| ||||||| |  |||||  || |||||||||||| ||| ||| |||| |||||||| |||||| | ||| |  | |||||||||||| ||||     
T  26636958 attagataagtatgacagaattccacatgaagatatccaaaagattcttaaagttagctatgacgctttggatgaagaacaacagagtgtctttttagat 26637057  T
Q  141 attgcttgttgcttcaaag 159  Q
    |||||||||| ||| ||||    
T  26637058 attgcttgtttctttaaag 26637076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 159
Target Start/End: Original strand, 26742924 - 26743042
Alignment:
Q  41 attagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctagac 140  Q
    ||||||| ||||||| |  |||||  || |||||||||||| ||| ||| |||| |||||||| |||||| | ||| |  | |||||||||||| ||||     
T  26742924 attagataagtatgacagaattccacatgaagatatccaaaagattcttaaagttagctatgacgctttggatgaagaacaacagagtgtctttttagat 26743023  T
Q  141 attgcttgttgcttcaaag 159  Q
    |||||||||| ||| ||||    
T  26743024 attgcttgtttctttaaag 26743042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 26960437 - 26960506
Alignment:
Q  41 attagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttg 110  Q
    ||||||| ||||||| |  |||||  || |||||||||||| ||||||| ||||||||||||| ||||||    
T  26960437 attagataagtatgacagaattccacatgaagatatccaaaagatacttaaagtaagctatgacgctttg 26960506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 334
Target Start/End: Complemental strand, 27663826 - 27663777
Alignment:
Q  285 ttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
    |||||||||||||||||| | ||||||| |||| | ||||||||||||||    
T  27663826 ttacatgacttgatagagtatatgggtatagaaatagtccgacaagaatc 27663777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 29695165 - 29695092
Alignment:
Q  132 tttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatgg 205  Q
    ||||| ||||||||||||||| ||||||| || || | ||||| |||    |||||||||||||||||||||||    
T  29695165 tttcttgacattgcttgttgcctcaaaggatggaatttgacaagagtagaagaaatacttcatgctcattatgg 29695092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 490 - 550
Target Start/End: Original strand, 3050094 - 3050154
Alignment:
Q  490 tcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacaca 550  Q
    ||||||| |||| ||| ||||||||||||||||   | ||||| |||||||||||||||||    
T  3050094 tcgcccgggctcaatcaataatttttgcacattgagcgcaaccgaaaagcccattaacaca 3050154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 25075176 - 25075288
Alignment:
Q  38 tacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttcta 137  Q
    |||||||||| |||||||||  |||||   | ||||||||||||  |||||| ||||||||| ||| |||||| | ||| |  | |||||||||||| |     
T  25075176 tacattagataagtatgaaagaattccacctgaagatatccaaaaaatacttaaagtaagctttgacgctttggacgaagaacaacagagtgtctttttg 25075275  T
Q  138 gacattgcttgtt 150  Q
    || ||||||||||    
T  25075276 gatattgcttgtt 25075288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 160
Target Start/End: Original strand, 28186705 - 28186825
Alignment:
Q  40 cattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctaga 139  Q
    ||||| || |||||||||  |||||||||||| | ||||||  ||||||  ||||||||| ||||||||||  ||||   || || | ||| ||||| ||    
T  28186705 cattaaatcagtatgaaaggattcccgataaaaagatccaagagatactcaaagtaagctttgatgctttgggggaagcagaacaaaatgtttttctcga 28186804  T
Q  140 cattgcttgttgcttcaaagg 160  Q
    ||| ||||| |||||||||||    
T  28186805 catcgcttgctgcttcaaagg 28186825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 370
Target Start/End: Original strand, 28186955 - 28187047
Alignment:
Q  278 tgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtt 370  Q
    |||||| ||||||| |||||||||| | |||||||||||| | |||||  |||| ||||| ||   |||||||  ||| ||||||||||||||    
T  28186955 tgtgacgttacatgccttgatagagaaaatgggtaaagaaattgtccggaaagagtctccaaaagagcctggaagacgtagtaggttgtggtt 28187047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 29842611 - 29842563
Alignment:
Q  286 tacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
    |||||||||||||||| ||||||||||||||| | || |||| ||||||    
T  29842611 tacatgacttgatagaagacatgggtaaagaaattgtacgaccagaatc 29842563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 183; Significance: 1e-98; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 455 - 645
Target Start/End: Complemental strand, 41251821 - 41251631
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41251821 catgggcggttctaccgtgtagtgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 41251722  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41251721 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 41251631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 455 - 645
Target Start/End: Complemental strand, 17445226 - 17445038
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  17445226 catgggcggttctaccgtgtggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacattta 17445129  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17445128 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 17445038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 454 - 645
Target Start/End: Complemental strand, 6403992 - 6403801
Alignment:
Q  454 ccatgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 553  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  6403992 ccatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattt 6403893  T
Q  554 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6403892 ataaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 6403801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 42439966 - 42440156
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42439966 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacattta 42440065  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||||| |||||    
T  42440066 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacggattcatgtctct 42440156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 35962695 - 35962885
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||||||||| | |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  35962695 catgggcggttctaccgtatggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacattta 35962794  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  35962795 caaaaagaaaattttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 35962885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 454 - 645
Target Start/End: Complemental strand, 32127329 - 32127138
Alignment:
Q  454 ccatgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 553  Q
    ||||||||||||||| ||| | ||||||||||||||||||||| |||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||    
T  32127329 ccatgggcggttctagcgtatggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacattt 32127230  T
Q  554 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| | ||||| |||||    
T  32127229 acaaaaagaaaaatttaggcaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacgggttcatgtctct 32127138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 459 - 645
Target Start/End: Complemental strand, 31581805 - 31581619
Alignment:
Q  459 ggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 558  Q
    ||||||||||| || | |||||| |||||||||||||  |||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  31581805 ggcggttctactgtatggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaa 31581706  T
Q  559 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  31581705 aagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 31581619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 454 - 645
Target Start/End: Original strand, 16405579 - 16405770
Alignment:
Q  454 ccatgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 553  Q
    ||||||||||||||||| | | | ||||| ||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  16405579 ccatgggcggttctaccatatggtgaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacattt 16405678  T
Q  554 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    | |||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||||| |||||    
T  16405679 ataaaaagaaaaatttggacaatctgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacgggttcatgtctct 16405770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 18981597 - 18981786
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||||||||| | ||||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  18981597 catgggcggttctaccgtatggcgaccc-gggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacattta 18981695  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||| ||||| | ||||| |||||    
T  18981696 caaaaagaaaaatttgggcaatttaaaaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacgggttcatgtctct 18981786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 455 - 612
Target Start/End: Complemental strand, 2958287 - 2958131
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||||||||| | ||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2958287 catgggcggttctaccgtatggcgaccccgggcggtcgtccgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacattta 2958189  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattt 612  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  2958188 caaagagaaaaatttgggtaatctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 45418584 - 45418753
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  45418584 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 45418683  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||| | |||||||||||    
T  45418684 tctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctctct 45418753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 481 - 641
Target Start/End: Original strand, 771005 - 771165
Alignment:
Q  481 cccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctga 580  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  771005 cccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacacttacaaaaagaaaaatttgggcaatctga 771104  T
Q  581 aaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 641  Q
    ||||| ||||||| |||||||||| |||| ||||||||||||| ||||||| | |||||||    
T  771105 aaattctcacacgcaaataggtctcggaactttatttagcacattattgacgggttcatct 771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 476 - 645
Target Start/End: Complemental strand, 44084769 - 44084600
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| || ||| |||||||  |||||||||| ||||||||||||||||||||||||    
T  44084769 gcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaaaaagaaaaatttgggcaa 44084670  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||| ||| ||||||||||  ||||||||||||||||||||||||| | |||||||||||    
T  44084669 tctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatctctct 44084600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 476 - 641
Target Start/End: Original strand, 8147352 - 8147518
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| |||||| | ||||||||| ||||||||||||||||||||||||    
T  8147352 gcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 8147451  T
Q  576 tctg-aaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 641  Q
    |||| |||||| ||||||| |||||| ||| ||||||||||||| |||||||||||| | |||||||    
T  8147452 tctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgggttcatct 8147518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 500 - 645
Target Start/End: Complemental strand, 12756979 - 12756834
Alignment:
Q  500 tcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaata 599  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||    
T  12756979 tcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaata 12756880  T
Q  600 ggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
     |||| |||||||||||||||||||||||||| | |||||||||||    
T  12756879 agtctcggaattttatttagcacactattgacgggttcatctctct 12756834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 477 - 645
Target Start/End: Complemental strand, 8059498 - 8059330
Alignment:
Q  477 cgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaat 576  Q
    ||||||||| || ||||||  |||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  8059498 cgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaaaaagaaaaatttggccaat 8059399  T
Q  577 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
     |||||||| ||||||  |||| ||||| ||||||||||||||||||| |||||| | ||||| |||||    
T  8059398 ttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgggttcatttctct 8059330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 500 - 631
Target Start/End: Original strand, 2285887 - 2286018
Alignment:
Q  500 tcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaata 599  Q
    |||||||||||||||||||||||| |  ||||| ||||| | |||||||||||||| ||| |||||||||| |||||||||||||||||||||| |||||    
T  2285887 tcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacgaaaggaaaaatttgagcaatctgaaaattgtcacacgcaaata 2285986  T
Q  600 ggtcttggaattttatttagcacactattgac 631  Q
    ||| ||||||||||||||||||||||||||||    
T  2285987 ggttttggaattttatttagcacactattgac 2286018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 504 - 645
Target Start/End: Complemental strand, 26162837 - 26162699
Alignment:
Q  504 tcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtc 603  Q
    |||||||||||| ||||||| | ||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||| ||| ||  |||||||||    
T  26162837 tcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaacacaaataggtc 26162738  T
Q  604 ttggaattttatttagcacactattgacagtttcatctctct 645  Q
    | |||   |||||||||||| ||||||| | |||||||||||    
T  26162737 tcgga---ttatttagcacattattgacgggttcatctctct 26162699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 476 - 583
Target Start/End: Original strand, 26237958 - 26238065
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc-a 574  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||||  ||| ||||||| ||||||||||| |||||||||||||||||||||| |    
T  26237958 gcgaccccgggcggtcgcccgggctcgatcgata-tttttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttgggcaa 26238056  T
Q  575 atctgaaaa 583  Q
    |||||||||    
T  26238057 atctgaaaa 26238065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 499 - 601
Target Start/End: Complemental strand, 4555354 - 4555250
Alignment:
Q  499 ctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattgtcacacgtaa 596  Q
    ||||||||||||||||||||||| | || |||||||||||| | |||||||| |||||||||||||| |||||||  |||||||||||| ||||||||||    
T  4555354 ctcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaagaaaattttgggcaaaatctgaaaattctcacacgtaa 4555255  T
Q  597 atagg 601  Q
    |||||    
T  4555254 atagg 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 484 - 601
Target Start/End: Complemental strand, 7072710 - 7072589
Alignment:
Q  484 gggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaa--cacatttacaaaaagaaaaatttgggcaa--tctg 579  Q
    ||||||||||||| ||||||||||||||||||  |||||| ||||||||||||||||||||||  |||| ||| ||||||||||  |||| |||  ||||    
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacacacacttataaaaagaaaatattggacaaattctg 7072611  T
Q  580 aaaattgtcacacgtaaatagg 601  Q
    |||||| || ||||||||||||    
T  7072610 aaaattctcgcacgtaaatagg 7072589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 286 - 369
Target Start/End: Complemental strand, 17991822 - 17991739
Alignment:
Q  286 tacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggt 369  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||| || ||   |||||||||||| ||||| |||||||    
T  17991822 tacatgacttgatagaggacatgggtaaagaaatcgttcggcaagaatcacctaaagagcctggagaacggagtagattgtggt 17991739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 498 - 550
Target Start/End: Original strand, 34905972 - 34906024
Alignment:
Q  498 gctcgatcgataatttttgcacattagactcaacccaaaagcccattaacaca 550  Q
    ||||||||||||||||||||||||||  |  ||||||||||||||||||||||    
T  34905972 gctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacaca 34906024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 3281013 - 3281092
Alignment:
Q  83 gatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctagacattgcttgttgcttcaaagggt 162  Q
    ||||||| |||| || | |||||||||| ||||| | || || ||||| ||||| ||||||||||||||||| |||||||    
T  3281013 gatacttaaagtgagttttgatgctttggaggaagacgagcaaagtgtttttctcgacattgcttgttgctttaaagggt 3281092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 175; Significance: 7e-94; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 455 - 645
Target Start/End: Complemental strand, 14777294 - 14777104
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14777294 catgggcggttctaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacattta 14777195  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14777194 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatcgctct 14777104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 5555467 - 5555657
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5555467 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcattta 5555566  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  5555567 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 5555657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 454 - 645
Target Start/End: Complemental strand, 3114284 - 3114093
Alignment:
Q  454 ccatgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 553  Q
    ||||||||||||||||||| | | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3114284 ccatgggcggttctaccgtatggtgaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 3114185  T
Q  554 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  3114184 acaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 3114093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 459 - 645
Target Start/End: Original strand, 8394109 - 8394295
Alignment:
Q  459 ggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 558  Q
    |||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  8394109 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa 8394208  T
Q  559 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||    
T  8394209 aggaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgggtttatctctct 8394295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 459 - 645
Target Start/End: Original strand, 36630800 - 36630986
Alignment:
Q  459 ggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 558  Q
    |||||||||||||| | |||||||||| |||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  36630800 ggcggttctaccgtatggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa 36630899  T
Q  559 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| | |||||||||||    
T  36630900 aagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatctctct 36630986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 476 - 645
Target Start/End: Complemental strand, 34389222 - 34389053
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  34389222 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggcaa 34389123  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||| ||| ||| | |||||||||||    
T  34389122 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctctct 34389053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 476 - 645
Target Start/End: Complemental strand, 8867897 - 8867728
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  8867897 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaaaaagaaaaatttgggcaa 8867798  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    || ||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||| ||||    
T  8867797 tcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatcactct 8867728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 484 - 645
Target Start/End: Original strand, 35090177 - 35090338
Alignment:
Q  484 gggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 583  Q
    ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  584 ttgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    || ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctctct 35090338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 476 - 645
Target Start/End: Complemental strand, 37002310 - 37002141
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||||||||||||||  ||  |||||||||||||||||||||||||||| ||| ||||||| | ||||||||| ||||||||||||||||||||||||    
T  37002310 gcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 37002211  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  37002210 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 37002141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 498 - 645
Target Start/End: Complemental strand, 40920147 - 40920000
Alignment:
Q  498 gctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaa 597  Q
    |||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| | |||    
T  40920147 gctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatgcaaa 40920048  T
Q  598 taggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||| |||||||||||||||||||||||||| | |||||||||||    
T  40920047 taggtctcggaattttatttagcacactattgacgggttcatctctct 40920000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 479 - 645
Target Start/End: Original strand, 26624749 - 26624916
Alignment:
Q  479 accccgggcggtcgcccgagctcgat-cgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 577  Q
    |||||||||||||||| | ||||||| |||||||||||||| ||||||| ||| |||||||   ||||||||| ||||||||||||||||||||||||||    
T  26624749 accccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttacaaaaagaaaaatttgggcaatc 26624848  T
Q  578 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  26624849 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 26624916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 494 - 641
Target Start/End: Complemental strand, 38638384 - 38638237
Alignment:
Q  494 ccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacg 593  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  38638384 ccgagctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 38638285  T
Q  594 taaataggtcttggaattttatttagcacactattgacagtttcatct 641  Q
     |||||||||| |||||||||||||||||||||||||| | |||||||    
T  38638284 caaataggtctcggaattttatttagcacactattgacgggttcatct 38638237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 482 - 645
Target Start/End: Complemental strand, 43184628 - 43184465
Alignment:
Q  482 ccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaa 581  Q
    |||||||||||| || |||||||||||||||||| | ||| ||||| |||||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  43184628 ccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaa 43184529  T
Q  582 aattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||| ||||||| ||||||||||  ||||||||||||||||||||||||| | |||||||||||    
T  43184528 aattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctctct 43184465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 476 - 631
Target Start/End: Original strand, 33685565 - 33685720
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||||| ||| ||||| || |||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33685565 gcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaaaaagaaaaatttgggcaa 33685664  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 631  Q
    |||||||||| ||| ||| ||||| ||||   ||||||||||||||||||||||||    
T  33685665 tctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgac 33685720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 499 - 645
Target Start/End: Original strand, 36658205 - 36658351
Alignment:
Q  499 ctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaat 598  Q
    |||||||||||||||||||||||| ||| ||||| ||||||| ||||||| | | ||||||| |||||||||||||||||||||||| ||||||| ||||    
T  36658205 ctcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacacgcaaat 36658304  T
Q  599 aggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||| |||||||||||||||||||||||||| | |||||||||||    
T  36658305 aggtctcggaattttatttagcacactattgacgggttcatctctct 36658351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 7002726 - 7002895
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||| ||||||||||| ||||||||||  ||||||  |||||| || ||||||||||||| |||||||||  |||||||| |||||||||| |||    
T  7002726 gcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggacaa 7002825  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||| |||||| ||||||| |||||||||  |||||||||||||||||||||||||| | |||||||||||    
T  7002826 tctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctctct 7002895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 7048597 - 7048766
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||| ||||||||||| ||||||||||  ||||||  |||||| || ||||||||||||| |||||||||  |||||||| |||||||||| |||    
T  7048597 gcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggacaa 7048696  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||| |||||| ||||||| |||||||||  |||||||||||||||||||||||||| | |||||||||||    
T  7048697 tctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctctct 7048766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 534 - 601
Target Start/End: Complemental strand, 10868583 - 10868514
Alignment:
Q  534 aaaagcccattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattgtcacacgtaaatagg 601  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||    
T  10868583 aaaagcccattaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 462 - 550
Target Start/End: Original strand, 26502797 - 26502885
Alignment:
Q  462 ggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacaca 550  Q
    ||||| ||||||| |||||||| ||| |||||||| ||||||||||   |||||||| ||||  | |||||||||||||||||||||||    
T  26502797 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacaca 26502885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 26589917 - 26589829
Alignment:
Q  462 ggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacaca 550  Q
    ||||| ||||||| |||||||| ||| |||||||| ||||||||||   |||||||| ||||  | |||||||||||||||||||||||    
T  26589917 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacaca 26589829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 488 - 520
Target Start/End: Complemental strand, 10876861 - 10876829
Alignment:
Q  488 ggtcgcccgagctcgatcgataatttttgcaca 520  Q
    ||||||||| |||||||||||||||||||||||    
T  10876861 ggtcgcccgggctcgatcgataatttttgcaca 10876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 175; Significance: 7e-94; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 20129290 - 20129480
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20129290 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 20129389  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  20129390 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgacagtttcatctctct 20129480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 455 - 645
Target Start/End: Complemental strand, 26439466 - 26439276
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26439466 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 26439367  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  26439366 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctctct 26439276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 455 - 645
Target Start/End: Complemental strand, 34407471 - 34407281
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34407471 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 34407372  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  34407371 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctctct 34407281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 454 - 645
Target Start/End: Original strand, 13012167 - 13012358
Alignment:
Q  454 ccatgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 553  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  13012167 ccatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacattt 13012266  T
Q  554 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13012267 ataaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 13012358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 47500753 - 47500943
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  47500753 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 47500852  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
      |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47500853 tgaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 47500943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 43355884 - 43356074
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||| |||||||||||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43355884 catgggcggttccaccgtgtagcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 43355983  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  43355984 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctctct 43356074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 25930688 - 25930878
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||||||||| | ||||||| ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25930688 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacattta 25930787  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  25930788 caaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 25930878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 38 - 334
Target Start/End: Original strand, 18075070 - 18075366
Alignment:
Q  38 tacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttcta 137  Q
    ||||||||||  ||||||||| |||||| ||||||| |||||||| |||||| |||| ||||||||| ||||| ||||| |||| || ||||||||||||    
T  18075070 tacattagattggtatgaaaagattcccaataaagagatccaaagaatacttaaagtgagctatgattctttggaggaagaggagcaaagtgtctttcta 18075169  T
Q  138 gacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacatcatgttggagtgttgg 237  Q
    ||||||||||||||||||||||| |||||||||  ||| || |  ||||||||||||||||||||||| ||||||||| | |||||||||| |||| | |    
T  18075170 gacattgcttgttgcttcaaaggttgtaaatgggaaaaggtcaaagaaatacttcatgctcattatggtcattgcataaatcatcatgttgaagtgctag 18075269  T
Q  238 ctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
     ||||||||||||||| | |||||  ||||| || | ||||||| | |||||| ||||||||||| |||||||||||||| ||||||||| ||||||    
T  18075270 ttgaaaaatgtctcattgaccattttgaatacgatagtcatgtgtcattacataacttgatagagaacatgggtaaagaactcgtccgactagaatc 18075366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 459 - 645
Target Start/End: Complemental strand, 36382528 - 36382343
Alignment:
Q  459 ggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 558  Q
    |||||||||||||| | ||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  36382528 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa 36382429  T
Q  559 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    | ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  36382428 a-gaaaaatttggacaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 36382343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 455 - 645
Target Start/End: Complemental strand, 29319892 - 29319702
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||||||||| | | |||||| |||||||| ||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29319892 catgggcggttctaccgtatggtgacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacattta 29319793  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||| | ||||| |||||    
T  29319792 caaaaagaaaaatttgagcaatctgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgacgggttcatgtctct 29319702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 477 - 645
Target Start/End: Complemental strand, 43143749 - 43143581
Alignment:
Q  477 cgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaat 576  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  43143749 cgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaat 43143650  T
Q  577 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||  | |||||||||||    
T  43143649 ctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctctct 43143581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 478 - 645
Target Start/End: Complemental strand, 3293060 - 3292893
Alignment:
Q  478 gaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 577  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  3293060 gaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatc 3292961  T
Q  578 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||   |||||||||||    
T  3292960 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctctct 3292893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 476 - 645
Target Start/End: Complemental strand, 30216908 - 30216739
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  30216908 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggcaa 30216809  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||| | |||||| ||| |||||||||||||||||||||||||| | |||||||||||    
T  30216808 tctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatctctct 30216739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 476 - 645
Target Start/End: Complemental strand, 50205243 - 50205074
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| ||||||||||||||| |||| |||    
T  50205243 gcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaaaaagaaaaaattggacaa 50205144  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  50205143 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatcactct 50205074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 458 - 645
Target Start/End: Complemental strand, 17511417 - 17511230
Alignment:
Q  458 gggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 557  Q
    ||||||||||||||| | ||||||| || |||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17511417 gggcggttctaccgtatggcgaccctgg-cggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 17511319  T
Q  558 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgg-aattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||||||||||||||| ||||||  | |||||||||||    
T  17511318 aaagaaaaatttgggcaatttgaaaattgttacacgcaaataggtcttggaaattttatttagcacattattgatcggttcatctctct 17511230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 475 - 645
Target Start/End: Complemental strand, 42333943 - 42333773
Alignment:
Q  475 agcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 574  Q
    ||||| |||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  42333943 agcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 42333844  T
Q  575 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||| ||||| |  |||||||||||    
T  42333843 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgataagttcatctctct 42333773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 476 - 645
Target Start/End: Complemental strand, 6690401 - 6690232
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  6690401 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 6690302  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
     ||||||||| ||||||| |||||||||| | |||||||||||||||||||||||| | ||| |||||||    
T  6690301 actgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgggttcgtctctct 6690232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 458 - 645
Target Start/End: Original strand, 40528996 - 40529185
Alignment:
Q  458 gggcggttctaccgtgtagcgaccccgggcg--gtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttac 555  Q
    ||||||||||||||| | ||||||| |||||  |||| |||  ||||||||||||||||||||||||| |||||||| |||| | |||||||||||||||    
T  40528996 gggcggttctaccgtatggcgaccctgggcgaggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttac 40529095  T
Q  556 aaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||| |||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  40529096 aaaaagaaaaatttggacaatttgaaaattgtcacatgcaaataggtcttggaattttatttagcacactattgacgggttcatatctct 40529185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 476 - 645
Target Start/End: Complemental strand, 10353050 - 10352881
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  10353050 gcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggcaa 10352951  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| | ||||| |||||||||| ||||||||||||||||||| | || | | |||||||||||    
T  10352950 tctgaaaattcttacacgcaaataggtctcggaattttatttagcacaccagtgtcggattcatctctct 10352881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 477 - 645
Target Start/End: Original strand, 48989330 - 48989498
Alignment:
Q  477 cgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaat 576  Q
    |||| ||||||||||  ||| | |||||||||||||||||||||||| || |||| |||||| ||||||||||| |||||||||||||||||||||||||    
T  48989330 cgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaaaaagaaaaatttgggcaat 48989429  T
Q  577 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||| ||| ||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  48989430 ctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 48989498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 449 - 645
Target Start/End: Original strand, 6235506 - 6235690
Alignment:
Q  449 tttagccatgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaaca 548  Q
    |||||||| ||||||||||||||| | ||||  | |||||||||| || |||||| |||||||||||||||            ||||||| |||||||||    
T  6235506 tttagccaagggcggttctaccgtatggcgattctgggcggtcgctcgggctcgaccgataatttttgcac------------ccaaaagtccattaaca 6235593  T
Q  549 catttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  6235594 catttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 6235690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 492 - 645
Target Start/End: Original strand, 44156668 - 44156821
Alignment:
Q  492 gcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcaca 591  Q
    ||||| |||| | |||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||| || ||    
T  44156668 gcccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctca 44156767  T
Q  592 cgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    || |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  44156768 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 44156821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 481 - 643
Target Start/End: Complemental strand, 29996144 - 29995982
Alignment:
Q  481 cccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctga 580  Q
    ||||| |||||| |||  |||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  29996144 cccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacgaaaagaaaaatttgggcaatctga 29996045  T
Q  581 aaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctct 643  Q
    ||||| |  |||| |||||| ||| ||||||||||| |||||||||||||| | |||||||||    
T  29996044 aaattcttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatctct 29995982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 476 - 645
Target Start/End: Complemental strand, 30077797 - 30077628
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||| |||||||||||||  |||| |||||||| ||||||||||||||| ||||| |||||  ||||||||||||||||||||||||||||||| |||    
T  30077797 gcgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttacaaaaagaaaaatttggacaa 30077698  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| | ||||  |||||||||||| ||||||||||||||||||| || | | |||||||||||    
T  30077697 tctgaaaatttttacacacaaataggtcttgaaattttatttagcacactagtgccggattcatctctct 30077628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 478 - 645
Target Start/End: Complemental strand, 28877414 - 28877247
Alignment:
Q  478 gaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 577  Q
    ||||||| ||||||||  | ||| |||||||||||||||||||||||| |||||| ||||||  ||||||||  ||| ||||||||||||||||| ||||    
T  28877414 gaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataaaaagaaaaatttgggaaatc 28877315  T
Q  578 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    | |||||| ||||||| |||||||||| |||||||||||||||||||||||||  | |||||||||||    
T  28877314 taaaaattctcacacgcaaataggtctcggaattttatttagcacactattgatgggttcatctctct 28877247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 499 - 645
Target Start/End: Original strand, 35545977 - 35546123
Alignment:
Q  499 ctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaat 598  Q
    ||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  599 aggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
     |||||  ||||||||||||||||||||||||  | |||||||||||    
T  35546077 gggtctctgaattttatttagcacactattgatgggttcatctctct 35546123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 510 - 645
Target Start/End: Original strand, 1817752 - 1817887
Alignment:
Q  510 atttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaa 609  Q
    ||||||||||||||||  ||| ||||||| ||||||| ||||||| ||||||||||||||||||||||| |||||| | ||||| |||||||||| ||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  610 ttttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||| |||||||||| | | |||||||||||    
T  1817852 ttttatttaacacactattgtcggattcatctctct 1817887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 499 - 629
Target Start/End: Original strand, 26448077 - 26448206
Alignment:
Q  499 ctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaat 598  Q
    ||||||||||||||||||||||||| |   |||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| ||| ||  ||||    
T  26448077 ctcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaaaaa-aaaaatttgggcaatctgaaaattctcatacacaaat 26448175  T
Q  599 aggtcttggaattttatttagcacactattg 629  Q
    |||| | ||||||||||||||||||||||||    
T  26448176 aggtttcggaattttatttagcacactattg 26448206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 477 - 601
Target Start/End: Original strand, 30109958 - 30110084
Alignment:
Q  477 cgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc--a 574  Q
    ||||||||| ||||||||||  |||||||||||||||||||||||||||| ||| || |||| ||||||||||| |||||||||||||||||||| |  |    
T  30109958 cgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaaaaatttggacaaa 30110057  T
Q  575 atctgaaaattgtcacacgtaaatagg 601  Q
    || |||||| | ||||||| |||||||    
T  30110058 atatgaaaaatctcacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 487 - 572
Target Start/End: Original strand, 48129978 - 48130063
Alignment:
Q  487 cggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttggg 572  Q
    |||||| ||| ||||||||||||||||||||| ||||||| |||||||||||| |||||||||| |||||||||||||||||||||    
T  48129978 cggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttggg 48130063  T

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Target: chr4; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 553 - 645
Target Start/End: Complemental strand, 13392970 - 13392878
Alignment:
Q  553 tacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||||| |||||| ||||||| |||||||||| | |||||||||||||||||||||||  | |||||||||||    
T  13392970 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgaatgattcatctctct 13392878  T

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Target: chr4; HSP #32
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 553 - 645
Target Start/End: Complemental strand, 13396109 - 13396017
Alignment:
Q  553 tacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||||| |||||| ||||||| |||||||||| | |||||||||||||||||||||||  | |||||||||||    
T  13396109 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgaatgattcatctctct 13396017  T

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Target: chr4; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 458 - 560
Target Start/End: Original strand, 27363344 - 27363446
Alignment:
Q  458 gggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 557  Q
    |||||||| |||||| | |||||| |||||||||||||| ||||||||||   |||||||| ||||| | ||||||||||||||||||||||| ||||||    
T  27363344 gggcggttttaccgtatggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaa 27363443  T
Q  558 aaa 560  Q
    |||    
T  27363444 aaa 27363446  T

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Target: chr4; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 477 - 575
Target Start/End: Original strand, 45194178 - 45194276
Alignment:
Q  477 cgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||| |||| | |||||  ||||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||  ||||||||    
T  45194178 cgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaaaaaaaaaatattgggcaa 45194276  T

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Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 165
Target Start/End: Complemental strand, 18698269 - 18698142
Alignment:
Q  38 tacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttcta 137  Q
    |||||||||| |||||||||  |||||  || |||||||||||| ||||||| ||||||||| |||||||||| | ||| |  | || ||||||||| |     
T  18698269 tacattagataagtatgaaagaattccacatgaagatatccaaaagatacttaaagtaagctttgatgctttggacgaagaacaacaaagtgtctttttg 18698170  T
Q  138 gacattgcttgttgcttcaaagggtgta 165  Q
    || |||||||||| ||||||||| ||||    
T  18698169 gatattgcttgtttcttcaaaggatgta 18698142  T

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Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 165
Target Start/End: Complemental strand, 18730373 - 18730246
Alignment:
Q  38 tacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttcta 137  Q
    |||||||||| |||||||||  |||||  || |||||||||||| ||||||| ||||||||| |||||||||| | ||| |  | || ||||||||| |     
T  18730373 tacattagataagtatgaaagaattccacatgaagatatccaaaagatacttaaagtaagctttgatgctttggacgaagaacaacaaagtgtctttttg 18730274  T
Q  138 gacattgcttgttgcttcaaagggtgta 165  Q
    || |||||||||| ||||||||| ||||    
T  18730273 gatattgcttgtttcttcaaaggatgta 18730246  T

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Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 500 - 568
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  500 tcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatt 568  Q
    |||||||||||||||||||||||| || ||||||||||| | ||||||||| || |||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

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Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 386
Target Start/End: Complemental strand, 18678191 - 18678084
Alignment:
Q  279 gtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatg 378  Q
    ||||| |||||||||||| |||||| ||||||||||||| |||||||  ||||||| |||||   ||||| | | || ||||||||||||| |||| |||    
T  18678191 gtgacattacatgacttgctagaggtcatgggtaaagaaatcgtccggaaagaatcacccaaagagcctgaaaagcgtagtaggttgtggtgtcgcaatg 18678092  T
Q  379 atatagtt 386  Q
    | ||||||    
T  18678091 acatagtt 18678084  T

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Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 165
Target Start/End: Complemental strand, 18678429 - 18678302
Alignment:
Q  38 tacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttcta 137  Q
    |||||||||| |||||||||  |||||  || |||||||||||| ||||||| ||||||||| |||||||||| | ||| |  | || | ||||||| |     
T  18678429 tacattagataagtatgaaagaattccacatgaagatatccaaaagatacttaaagtaagctttgatgctttggacgaagaacaacaaattgtctttttg 18678330  T
Q  138 gacattgcttgttgcttcaaagggtgta 165  Q
    || |||||||||| ||||||||| ||||    
T  18678329 gatattgcttgtttcttcaaaggatgta 18678302  T

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Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 165
Target Start/End: Complemental strand, 18722954 - 18722827
Alignment:
Q  38 tacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttcta 137  Q
    ||||||||||  ||||||||  ||||| ||| |||||||||||| ||||||| ||||||||| ||||||||||   ||| |  | || ||||||||| |     
T  18722954 tacattagatatgtatgaaagaattccagatgaagatatccaaaagatacttaaagtaagctttgatgctttgggcgaagaacaacaaagtgtctttttg 18722855  T
Q  138 gacattgcttgttgcttcaaagggtgta 165  Q
    || |||||||||| ||||||||| ||||    
T  18722854 gatattgcttgtttcttcaaaggatgta 18722827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 379
Target Start/End: Complemental strand, 18730131 - 18730029
Alignment:
Q  277 atgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcga 376  Q
    ||||||| |||||||||||| |||||| ||||||||||||| |||||||  ||||||| |||||   ||||| | | || ||| ||||||||| ||||||    
T  18730131 atgtgacattacatgacttgctagaggtcatgggtaaagaaatcgtccggaaagaatcacccaaagagcctgaaaagcgtagtcggttgtggtgtcgcga 18730032  T
Q  377 tga 379  Q
    |||    
T  18730031 tga 18730029  T

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Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 18688463 - 18688355
Alignment:
Q  70 aagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatg 169  Q
    |||||||||||| ||||||| ||||||||| |||||||||| | ||| |  | || ||||||||| | || |||||||||| ||||||||| |||| ||     
T  18688463 aagatatccaaaagatacttaaagtaagctttgatgctttggacgaagaacaacaaagtgtctttttggatattgcttgtttcttcaaaggatgtatatt 18688364  T
Q  170 gacaaaagt 178  Q
    | |||||||    
T  18688363 ggcaaaagt 18688355  T

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Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 279 - 386
Target Start/End: Complemental strand, 18654111 - 18654004
Alignment:
Q  279 gtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatg 378  Q
    ||||| |||||||||||| |||||| ||||||||||||| |||||||  ||||||| || ||   ||||| | | || ||||||||||||| |||| |||    
T  18654111 gtgacattacatgacttgctagaggtcatgggtaaagaaatcgtccggaaagaatcacctaaacagcctgaaaagcgtagtaggttgtggtgtcgcaatg 18654012  T
Q  379 atatagtt 386  Q
    | ||||||    
T  18654011 acatagtt 18654004  T

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Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 38 - 165
Target Start/End: Complemental strand, 18654346 - 18654219
Alignment:
Q  38 tacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttcta 137  Q
    |||||||||| |||||||||  |||||  || |||||||||||| ||||||| ||||||| | |||||||||| | ||| |  | || ||||||||| |     
T  18654346 tacattagataagtatgaaagaattccacatgaagatatccaaaagatacttaaagtaagttttgatgctttggatgaagaacaacaaagtgtctttttg 18654247  T
Q  138 gacattgcttgttgcttcaaagggtgta 165  Q
    || ||||||||||  |||||||| ||||    
T  18654246 gatattgcttgtttgttcaaaggatgta 18654219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 516
Target Start/End: Original strand, 7769307 - 7769369
Alignment:
Q  454 ccatgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttg 516  Q
    ||||||||||||  |||||   |||||||| |||||||||||| |||||||||||||||||||    
T  7769307 ccatgggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 18698034 - 18697973
Alignment:
Q  279 gtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaa 340  Q
    ||||| |||||||||||| |||||| ||||||||||||| |||||||  ||||||| |||||    
T  18698034 gtgacattacatgacttgctagaggccatgggtaaagaaatcgtccggaaagaatcacccaa 18697973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 459 - 560
Target Start/End: Original strand, 20113775 - 20113876
Alignment:
Q  459 ggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 558  Q
    |||||||| ||||  | |||||||||| |  |||||||| ||| ||||||||||| |  |||||||  |||||||||||||| ||||||||| ||| |||    
T  20113775 ggcggttccaccgcctggcgaccccggacactcgcccgaactcaatcgataatttctttacattaggttcaacccaaaagccgattaacacacttaaaaa 20113874  T
Q  559 aa 560  Q
    ||    
T  20113875 aa 20113876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 512
Target Start/End: Complemental strand, 49908818 - 49908782
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatt 512  Q
    ||||||||||||||||||||| |||||||||||||||    
T  49908818 gcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 511
Target Start/End: Complemental strand, 6212064 - 6212029
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataat 511  Q
    |||||| |||||||||||||||||||||||||||||    
T  6212064 gcgacctcgggcggtcgcccgagctcgatcgataat 6212029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 608 - 645
Target Start/End: Original strand, 30110108 - 30110145
Alignment:
Q  608 aattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||| | |||||||||||    
T  30110108 aattttatttagcacactattgacgggttcatctctct 30110145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 608 - 645
Target Start/End: Original strand, 48130111 - 48130148
Alignment:
Q  608 aattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||| | |||||||||||    
T  48130111 aattttatttagcacactattgacgggttcatctctct 48130148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 512
Target Start/End: Complemental strand, 5517530 - 5517494
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatt 512  Q
    ||||||||||||||||||| | |||||||||||||||    
T  5517530 gcgaccccgggcggtcgcctgggctcgatcgataatt 5517494  T

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Target: chr3 (Bit Score: 171; Significance: 2e-91; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 455 - 641
Target Start/End: Complemental strand, 6269613 - 6269427
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    ||||||||||||||||||||||||| |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6269613 catgggcggttctaccgtgtagcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 6269514  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 641  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6269513 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 6269427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 455 - 645
Target Start/End: Complemental strand, 22968631 - 22968441
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22968631 catgggcggttctaccgtgtagcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacattta 22968532  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22968531 caaaaagaaaaatttgggcaatctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgacagtttcatctctct 22968441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 39771770 - 39771960
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39771770 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 39771869  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  39771870 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctctct 39771960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 19390126 - 19390316
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||| ||||||||||||| ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  19390126 catgggaggttctaccgtgtggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacattta 19390225  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19390226 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 19390316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 459 - 645
Target Start/End: Complemental strand, 34084305 - 34084119
Alignment:
Q  459 ggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 558  Q
    |||||||||||||| | |||||||||||||||||||||  ||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||    
T  34084305 ggcggttctaccgtatggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaa 34084206  T
Q  559 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  34084205 aagaaaaatttgggcaatatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatgggttcatctctct 34084119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 45182982 - 45183151
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  45182982 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 45183081  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||||  |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  45183082 tctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatctctct 45183151  T

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Target: chr3; HSP #7
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 454 - 645
Target Start/End: Complemental strand, 11018400 - 11018209
Alignment:
Q  454 ccatgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 553  Q
    ||||||||||||  |||||   ||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  11018400 ccatgggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactt 11018301  T
Q  554 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||||||||||| |||||| | |||||||||||    
T  11018300 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctctct 11018209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 476 - 645
Target Start/End: Complemental strand, 6931060 - 6930891
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||||||| |||||||||| |||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||    
T  6931060 gcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaaaaagaaaaatttaggcaa 6930961  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||   |||||||||||    
T  6930960 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctctct 6930891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 479 - 645
Target Start/End: Original strand, 27935182 - 27935348
Alignment:
Q  479 accccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatct 578  Q
    |||| |||| |||||||| |||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  27935182 accctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaaaaagaaaaatttgggcaatct 27935281  T
Q  579 gaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||| ||| ||| |||||||||| |||||||||||||||| ||||||||| | |||||||||||    
T  27935282 gaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatctctct 27935348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 458 - 645
Target Start/End: Complemental strand, 40081922 - 40081738
Alignment:
Q  458 gggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 557  Q
    ||||||||||||||| | ||||| | ||  ||||||||| ||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  40081922 gggcggttctaccgtatggcgactctgga-ggtcgcccgggctcgatcgataatttttgaacattagactcaacc-aaaagctcattaacacatttacaa 40081825  T
Q  558 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||||||||||| |||||||||||||||| |||||| |||||| ||||| ||||||||||||||||| | |||||||||||    
T  40081824 aaagaaaaatttgggcaatttgaaaattgtcacacgcaaatagatcttgg-attttttttagcacactattgacgggttcatctctct 40081738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 33040954 - 33041123
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||||||||||||||| || ||||||| ||||||||||||| ||||||| ||||||||||||  ||||||||| |||||||||||||||||||  |||    
T  33040954 gcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgaacaa 33041053  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    | |||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  33041054 tttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 33041123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 455 - 645
Target Start/End: Complemental strand, 6503756 - 6503566
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||  |||||   ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| |||| |||| |||    
T  6503756 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacactta 6503657  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||  |||||||||||||| ||||| | |||||||||| ||| ||||||||||||||| |||||  | |||||||||||    
T  6503656 caaaaagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatgggttcatctctct 6503566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 476 - 626
Target Start/End: Complemental strand, 19565667 - 19565517
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||| |||||||||||||||| | || |||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||||||||| |||    
T  19565667 gcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaaaaagaaaaatttggacaa 19565568  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacacta 626  Q
    |||||||||| | ||||| |||||||||| |||||||||||||||||||||    
T  19565567 tctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

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Target: chr3; HSP #14
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 45335876 - 45336044
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||| ||||||||||||||  ||| ||||||||||||| |||||||||| ||||| ||||| | |||||||||||||||||||||||||| |||||||    
T  45335876 gcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtc-attaacacatttacaaaaagaaaaatctgggcaa 45335974  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| | ||||| |||||||||||||||||||||||||||||||| || | | |||||||||||    
T  45335975 tctgaaaattcttacacgcaaataggtcttggaattttatttagcacactagtgccggattcatctctct 45336044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 35514267 - 35514432
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||||||| |||||| ||| ||||||||||||||||| ||| | ||||  ||||||||||| |||||||||||    ||||||||||||||||| |||    
T  35514267 gcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacaca----caaaaagaaaaatttggacaa 35514362  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    | |||||||| |||| || |||||||||| |||||||||||| ||||||||||||| | |||||||||||    
T  35514363 tatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatctctct 35514432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 498 - 601
Target Start/End: Original strand, 5135292 - 5135397
Alignment:
Q  498 gctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattgtcacacgta 595  Q
    ||||||||||| ||||||| ||||||||| ||||| |||||| |||||||||| |||||||||||||||||||| |  |||| ||||||| ||||||  |    
T  5135292 gctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctcacacaca 5135391  T
Q  596 aatagg 601  Q
    ||||||    
T  5135392 aatagg 5135397  T

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Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 459 - 532
Target Start/End: Original strand, 22922141 - 22922214
Alignment:
Q  459 ggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacc 532  Q
    |||||||| ||||| | |||| ||||||||||||| || ||||||||||| |||||||||||||| ||||||||    
T  22922141 ggcggttccaccgtatggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacattaaactcaacc 22922214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 615199 - 615272
Alignment:
Q  132 tttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatgg 205  Q
    ||||| ||||||||||||||||||||||| || |||| |||||  |||   |||||||||||||||||||||||    
T  615199 tttcttgacattgcttgttgcttcaaaggatggaaattgacaagggttgaagaaatacttcatgctcattatgg 615272  T

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Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 595 - 645
Target Start/End: Original strand, 22922215 - 22922265
Alignment:
Q  595 aaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||| ||||||||||||||||| |||||||||||| | |||||||||||    
T  22922215 aaatagatcttggaattttatttaacacactattgacgggttcatctctct 22922265  T

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Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 575
Target Start/End: Original strand, 5354710 - 5354809
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||||||||||||||| ||||||||  |||||||  ||||||||   ||||| | | ||||||| ||||| ||  ||||| ||||| ||||||||    
T  5354710 gcgaccccgggcggtcgcccgggctcgatccttaattttctcacattaggtccaacctataggcccatttacacacttcaaaaaaaaaaaaattgggcaa 5354809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 608 - 645
Target Start/End: Original strand, 5135421 - 5135458
Alignment:
Q  608 aattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||| | |||||||||||    
T  5135421 aattttatttagcacactattgacgggttcatctctct 5135458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 512
Target Start/End: Original strand, 6890999 - 6891035
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatt 512  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  6890999 gcgacaccgggcggtcgcccgggctcgatcgataatt 6891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 164; Significance: 3e-87; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 454 - 645
Target Start/End: Original strand, 17821 - 18012
Alignment:
Q  454 ccatgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 553  Q
    ||||||||||||||||||||| ||||||||| ||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17821 ccatgggcggttctaccgtgtggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 17920  T
Q  554 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17921 acaaaaagaaaaatttgggcaatctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattgacagtttcatctctct 18012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 3e-87; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 454 - 645
Target Start/End: Complemental strand, 36293809 - 36293618
Alignment:
Q  454 ccatgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 553  Q
    ||||||||||||||||||||| ||||||||| ||||||| |||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36293809 ccatgggcggttctaccgtgtggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacattt 36293710  T
Q  554 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36293709 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatttacagtttcatctctct 36293618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 39434676 - 39434866
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39434676 catgggcggttctaccgtgtggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacattta 39434775  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39434776 caaaatgaaaaatttgggcaatctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgacagtttcatctctct 39434866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 455 - 645
Target Start/End: Complemental strand, 26283505 - 26283315
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  26283505 catgggcggttccaccgtgtagcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattta 26283406  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26283405 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 26283315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 453 - 645
Target Start/End: Original strand, 10033905 - 10034097
Alignment:
Q  453 gccatgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatt 552  Q
    |||| ||||||||||||||| | |||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10033905 gccaggggcggttctaccgtatggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatt 10034004  T
Q  553 tacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  10034005 tacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 10034097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 458 - 645
Target Start/End: Original strand, 13817960 - 13818147
Alignment:
Q  458 gggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 557  Q
    ||||||||||||||| | |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13817960 gggcggttctaccgtatggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 13818059  T
Q  558 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |  ||||||||||    
T  13818060 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgggctcatctctct 13818147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 493 - 645
Target Start/End: Original strand, 16155015 - 16155167
Alignment:
Q  493 cccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacac 592  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  16155015 cccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacac 16155114  T
Q  593 gtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16155115 gcaaataggtcttggaattttatttagcacactattgacagattcatctctct 16155167  T

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Target: chr5; HSP #7
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 454 - 645
Target Start/End: Complemental strand, 39657694 - 39657503
Alignment:
Q  454 ccatgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 553  Q
    ||||||||||||||||  | | |||||||| | ||||||  || ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  39657694 ccatgggcggttctactatatggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacattt 39657595  T
Q  554 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  39657594 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 39657503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 459 - 641
Target Start/End: Complemental strand, 1776559 - 1776377
Alignment:
Q  459 ggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 558  Q
    |||||||||||||| |  |||||||||||||||||||| ||||||||||||||||||| |||||| | |||||| ||||| |||||||||||||||||||    
T  1776559 ggcggttctaccgtatgacgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaa 1776460  T
Q  559 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 641  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  1776459 aagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct 1776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 476 - 645
Target Start/End: Complemental strand, 12279026 - 12278857
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  12279026 gcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaaaaagaaaaatttgggcaa 12278927  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  12278926 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatctctct 12278857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 476 - 645
Target Start/End: Complemental strand, 17332717 - 17332548
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  17332717 gcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 17332618  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  17332617 tctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctctct 17332548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 31680368 - 31680537
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||||||||||||||| |||||||||||||||||| | |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  31680368 gcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 31680467  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||| | |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  31680468 tctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 31680537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 505 - 645
Target Start/End: Complemental strand, 16334013 - 16333873
Alignment:
Q  505 cgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtct 604  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  605 tggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||||||||||||||||||| | ||||| |||||    
T  16333913 tggaattttatttagcacactattgacggattcatgtctct 16333873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 477 - 642
Target Start/End: Original strand, 19985941 - 19986106
Alignment:
Q  477 cgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaat 576  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||| |||    
T  19985941 cgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggtaat 19986040  T
Q  577 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 642  Q
    || |||||| ||||||| |||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  19986041 ctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatctc 19986106  T

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Target: chr5; HSP #14
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 37254642 - 37254811
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  37254642 gcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 37254741  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||| ||||||| | |||||||||||    
T  37254742 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatctctct 37254811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 489 - 645
Target Start/End: Original strand, 33430335 - 33430491
Alignment:
Q  489 gtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtc 588  Q
    |||||||| |||||||||||||||||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  589 acacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 33430491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 455 - 626
Target Start/End: Complemental strand, 3155818 - 3155647
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||||| ||| | |||| ||||||||||||| || |||||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  3155818 catgggcggttctatcgtatggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacattta 3155719  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacacta 626  Q
     |||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  3155718 taaaaagaaaaatttggacaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 476 - 630
Target Start/End: Complemental strand, 31501882 - 31501728
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  31501882 gcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 31501783  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 630  Q
    |||||||||| || |||| |||||||||| | |||||||||||||||||||||||    
T  31501782 tctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattga 31501728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 498 - 645
Target Start/End: Original strand, 43068900 - 43069047
Alignment:
Q  498 gctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaa 597  Q
    |||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||    
T  43068900 gctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatgtaaa 43068999  T
Q  598 taggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    || |||| |||||||||||||||||||||||| | | |||||||||||    
T  43069000 taagtctcggaattttatttagcacactattgccggattcatctctct 43069047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 477 - 645
Target Start/End: Original strand, 36291373 - 36291541
Alignment:
Q  477 cgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaat 576  Q
    |||| ||||||||||| ||| | |||||| |||||||||||||||||||   |||| |||||  ||||||||||||||||||||||||||||||||||||    
T  36291373 cgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaaaaagaaaaatttgggcaat 36291472  T
Q  577 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    || |||||| | ||||  ||||||||||  |||||||||||| |||||||||||| | |||||||||||    
T  36291473 ctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacgggttcatctctct 36291541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 488 - 601
Target Start/End: Original strand, 28801300 - 28801415
Alignment:
Q  488 ggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttggg--caatctgaaaatt 585  Q
    ||||||||  ||||||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||   ||| ||||||||    
T  28801300 ggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaatt 28801399  T
Q  586 gtcacacgtaaatagg 601  Q
     ||||||| |||||||    
T  28801400 ctcacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 277 - 395
Target Start/End: Original strand, 16692412 - 16692530
Alignment:
Q  277 atgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcga 376  Q
    ||||||| || ||| ||||||| |||||||||||||||||| | |||||| ||||||| || ||    |||||  ||||||||||||||||||||| |||    
T  16692412 atgtgacattgcatcacttgattgaggacatgggtaaagaaattgtccgaaaagaatccccaaaacatcctggtaaacgcagtaggttgtggtttcacga 16692511  T
Q  377 tgatatagttaacgtttta 395  Q
     ||||||||| | ||||||    
T  16692512 agatatagttcaagtttta 16692530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 13717603 - 13717671
Alignment:
Q  132 tttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcat 200  Q
    ||||| ||||||||||||||||||||||| | ||||| |||||| || |  ||||||||||||||||||    
T  13717603 tttcttgacattgcttgttgcttcaaaggatataaatcgacaaaggtcaaagaaatacttcatgctcat 13717671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 202652 - 202724
Alignment:
Q  488 ggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaa 560  Q
    ||||||||| |||||||||||||||| || |||||||    |||||||||||||||||| ||| | |||||||    
T  202652 ggtcgcccgggctcgatcgataatttgtgtacattaggtcgaacccaaaagcccattaagacactaacaaaaa 202724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 511
Target Start/End: Original strand, 14316641 - 14316694
Alignment:
Q  458 gggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataat 511  Q
    ||||||||||||||| | |||| | |||||||||||||  ||||||||||||||    
T  14316641 gggcggttctaccgtatggcgatctcgggcggtcgcccaggctcgatcgataat 14316694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 608 - 645
Target Start/End: Original strand, 28801439 - 28801476
Alignment:
Q  608 aattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  28801439 aattttatttagctcactattgacaggttcatctctct 28801476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 163; Significance: 1e-86; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 455 - 645
Target Start/End: Complemental strand, 480644 - 480454
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  480644 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 480545  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  480544 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 480454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 1e-86; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 26144235 - 26144425
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  26144235 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 26144334  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26144335 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 26144425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 7433425 - 7433615
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    |||||||||||||||||| | || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7433425 catgggcggttctaccgtatggcaaccccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacattta 7433524  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||| |||||||||||| |||||||||||||  |||||||||||| |||||||||||||||||||||||| | ||||| |||||    
T  7433525 caaaaagaaaattttgggcaatctaaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacgggttcatgtctct 7433615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 462 - 645
Target Start/End: Complemental strand, 32982236 - 32982053
Alignment:
Q  462 ggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaag 561  Q
    ||||||||||| | |||||||||||||||||| || || |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  32982236 ggttctaccgtatggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaag 32982137  T
Q  562 aaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  32982136 aaaaatttggacaatctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgacagattcatctctct 32982053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 458 - 645
Target Start/End: Complemental strand, 42311125 - 42310938
Alignment:
Q  458 gggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 557  Q
    ||||||||||||||| | |||||||| | || ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42311125 gggcggttctaccgtatggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaa 42311026  T
Q  558 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| || |||||||| | |||||||||||    
T  42311025 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctctct 42310938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 22 - 396
Target Start/End: Complemental strand, 267229 - 266861
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| |||||| |||||||||||| |||||| || |||||| ||||||| ||||||| ||||||| |||| |||||||||| |||| | ||| ||||    
T  267229 tagaagaatggaagggtacattagatgggtatgataagattcccaataaagagatccaaaagatacttaaagtgagctatgatggtttggaagaagagga 267130  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacat 221  Q
     |||||||||||| ||||||||||||||||||||||||| | | |||||  | | |  |   | ||||||||| ||||||||||||| ||||||  ||||    
T  267129 gcagagtgtctttttagacattgcttgttgcttcaaaggatatgaatgggaagatgccaaacatatacttcattctcattatggccactgcataacacat 267030  T
Q  222 catgttggagtgttggctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtcg 321  Q
    ||| | ||||||||||||||||||| |||||||| ||      ||||| | | ||||||||| ||||||||| ||||||||||||||||||||||||| |    
T  267029 catctaggagtgttggctgaaaaatctctcatagacc------aatattatagtcatgtgacattacatgacatgatagaggacatgggtaaagaagtgg 266936  T
Q  322 tccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaa 396  Q
    |||| |||||||| || ||   |||||||||||| |||||||| |||| ||  |||||||||||| | |||||||    
T  266935 tccgccaagaatcacctaaagagcctggagaacgaagtaggttatggtgtcaagatgatatagttcatgttttaa 266861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 479 - 645
Target Start/End: Original strand, 3828988 - 3829153
Alignment:
Q  479 accccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatct 578  Q
    ||||||| ||||||| || | |||||||||||||||||||||||| || |||||||||||  |||||||||| |||||||||||||||||||||||||||    
T  3828988 accccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaaaaagaaaaatttgggcaatct 3829087  T
Q  579 gaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||| ||| ||| ||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  3829088 gaaaattttcatacgcaaataggtc-tggaattttatttagcacactattgacgggttcatctctct 3829153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 35907553 - 35907722
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||| ||||  ||| |||||||||||||| |||||| ||    
T  35907553 gcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacacttacaaaaagaaaattttgggtaa 35907652  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||| |||||||   |||||||||||    
T  35907653 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatctctct 35907722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 476 - 641
Target Start/End: Original strand, 17445314 - 17445479
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||  ||||||||||| ||| |||| |||||||||| ||||||||  ||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  17445314 gcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 17445413  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 641  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||| ||||||| | |||||||    
T  17445414 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatct 17445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 483 - 645
Target Start/End: Complemental strand, 321536 - 321374
Alignment:
Q  483 cgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaa 582  Q
    |||||||||| ||| |||||||||||||||||||  |||||||  ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  321536 cgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaaaaagaaaaatttgggcaatctgaaa 321437  T
Q  583 attgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||| ||| | | |||||||||| ||||||||||||| |||| ||||||| | |||||||||||    
T  321436 attctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatctctct 321374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 22 - 386
Target Start/End: Complemental strand, 28126564 - 28126206
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| |||||| ||||||||||||  |||||||| |||||  ||||| | ||||||  |||| || || ||||||||||||||||| ||||| | ||    
T  28126564 tagaagaatggaagggtacattagatggatatgaaaagattccaaataaaaagatccaagagatatttaaactaagctatgatgctttggaggaagatga 28126465  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacat 221  Q
     || ||||||||||| || || ||||| ||||||||||||| || || |||| | |||    | |||||||||||||||||||||||||||||| | |||    
T  28126464 gcaaagtgtctttctcgatatagcttgctgcttcaaagggtatagattgacagaggttgaaaagatacttcatgctcattatggccattgcataaagcat 28126365  T
Q  222 catgttggagtgttggctgaaaaatgtctcataggccattgggaatatgacactc---atgtgaccttacatgacttgatagaggacatgggtaaagaag 318  Q
    |||||||||||||||| |||||||| |||       ||||| || ||  | ||||   ||||||| |||||||||||||||||||| | ||||||||||     
T  28126364 catgttggagtgttggttgaaaaatctct-------cattgagatta--atactcaatatgtgacattacatgacttgatagaggatacgggtaaagaaa 28126274  T
Q  319 tcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagtt 386  Q
    |||||||  ||||||| |  ||   ||||||||||||||  ||||| |||| || | |||||||||||    
T  28126273 tcgtccggaaagaatcacgtaaagagcctggagaacgcaacaggttatggtgtcacaatgatatagtt 28126206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 22 - 255
Target Start/End: Complemental strand, 28132390 - 28132157
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| |||||| ||||||||||||  |||||||| |||||  ||||| | |||||   |||| || ||||||| || ||||||||| ||||| ||||    
T  28132390 tagaagaatggaagtgtacattagatggatatgaaaagattcctaataaaaagatccatgagatatttaaagtaagttacgatgctttggaggaagagga 28132291  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacat 221  Q
     || ||||||||||| || || |||||||||||||| |||| || || |||||  ||    || ||||||||||||||| |||||||||||||| |||||    
T  28132290 gcaaagtgtctttctggatatagcttgttgcttcaaggggtatagattgacaatggtcgaagagatacttcatgctcataatggccattgcataaaacat 28132191  T
Q  222 catgttggagtgttggctgaaaaatgtctcatag 255  Q
    ||||||||||||||||  ||||||| ||||||||    
T  28132190 catgttggagtgttggtcgaaaaatctctcatag 28132157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 41972458 - 41972314
Alignment:
Q  458 gggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 557  Q
    ||||||||| |||||  |||||||||||||||||||| | ||||||||||||||||||||||||||||  ||||| ||||||| ||||||||| ||||||    
T  41972458 gggcggttccaccgtccagcgaccccgggcggtcgcctg-gctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttacaa 41972360  T
Q  558 aaagaaaaatttgg--gcaatctgaaaattgtcacacgtaaatagg 601  Q
    ||||||||||||||    |||||||||||| ||||||| |||||||    
T  41972359 aaagaaaaatttggaaaaaatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 455 - 581
Target Start/End: Original strand, 23313218 - 23313345
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataattt-ttgcacattagactcaacccaaaagcccattaacacattt 553  Q
    |||||||||||||||||| | |||| | |||||||| ||||| ||||||| ||| |||| ||||||||||||||||||  |||||  |||||||||||||    
T  23313218 catgggcggttctaccgtatggcgatctcgggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacattt 23313317  T
Q  554 acaaaaagaaaaatttgggcaatctgaa 581  Q
    ||||||||||||||||||||||||||||    
T  23313318 acaaaaagaaaaatttgggcaatctgaa 23313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 49 - 419
Target Start/End: Original strand, 26137208 - 26137575
Alignment:
Q  49 agtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctagacattgcttg 148  Q
    |||||||||  |||||  || ||||||||||||  ||||||  ||||||||||||||||||| | ||| |  | || ||||| ||| | || ||||||||    
T  26137208 agtatgaaaggattccacatgaagatatccaaaacatacttagagtaagctatgatgctttggacgaagaacaacaaagtgtatttttggatattgcttg 26137307  T
Q  149 ttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacatcatgttggagtgttggctgaaaaatgt 248  Q
    |||||||||||||||||||| |||| ||||     | ||||||||||||| ||||| |||||||||| ||  ||||||||||||||||| ||| |||  |    
T  26137308 ttgcttcaaagggtgtaaattgacagaagtccaaaagatacttcatgctcgttatgaccattgcataaaaagtcatgttggagtgttggttgataaagct 26137407  T
Q  249 ctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctg 348  Q
    ||||| |   |||   | | | |   |  |||| | |||||||||||||||||||| |||||||||||| | |||||||||||||| |||||    ||||    
T  26137408 ctcat-gaagatta--atttttatggttttgtggcattacatgacttgatagaggatatgggtaaagaaattgtccgacaagaatcacccaaagaacctg 26137504  T
Q  349 gagaacgcagtaggttgtggtttcgcgatgatatagttaacgttttaagagataatacggtaaggaaaact 419  Q
    || |||||||||||||||||||||  || ||||||||| | ||||||| ||| ||||| || || ||||||    
T  26137505 gaaaacgcagtaggttgtggtttcatgaagatatagttcatgttttaaaagaaaatacagtgagtaaaact 26137575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 504 - 601
Target Start/End: Original strand, 33489716 - 33489815
Alignment:
Q  504 tcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattgtcacacgtaaatagg 601  Q
    ||||||||||||| ||||||||||||| | ||||||||||||||||| |||| |||||||||||||| ||  |||||||||||| ||||||| |||||||    
T  33489716 tcgataatttttgtacattagactcaaactaaaagcccattaacacacttactaaaagaaaaatttgagcaaaatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 500 - 544
Target Start/End: Complemental strand, 48901247 - 48901203
Alignment:
Q  500 tcgatcgataatttttgcacattagactcaacccaaaagcccatt 544  Q
    |||||||||||||| |||||||||| | |||||||||||||||||    
T  48901247 tcgatcgataatttatgcacattaggcccaacccaaaagcccatt 48901203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 560
Target Start/End: Complemental strand, 35951489 - 35951427
Alignment:
Q  498 gctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaa 560  Q
    ||||||||||||||||||| |||||||    ||||||| |||||||||||||| | |||||||    
T  35951489 gctcgatcgataatttttgtacattaggtcgaacccaatagcccattaacacactaacaaaaa 35951427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 608 - 645
Target Start/End: Original strand, 33489839 - 33489876
Alignment:
Q  608 aattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||| | |||||||||||    
T  33489839 aattttatttagcacactattgacgggttcatctctct 33489876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 160; Significance: 6e-85; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 454 - 645
Target Start/End: Original strand, 501 - 692
Alignment:
Q  454 ccatgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 553  Q
    ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  501 ccatgggcggttccaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattt 600  T
Q  554 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  601 ataaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 4e-77; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 455 - 645
Target Start/End: Original strand, 39914495 - 39914684
Alignment:
Q  455 catgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 554  Q
    ||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  39914495 catggacggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 39914594  T
Q  555 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
     ||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39914595 taaaaa-aaaaatttgggcaatttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 39914684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 458 - 645
Target Start/End: Complemental strand, 29728570 - 29728383
Alignment:
Q  458 gggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 557  Q
    ||||||||||||||| | |||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  29728570 gggcggttctaccgtatggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaa 29728471  T
Q  558 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||| | |||||||||||    
T  29728470 aaagaaaaatttgggcaatctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctctct 29728383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 479 - 645
Target Start/End: Complemental strand, 16788188 - 16788022
Alignment:
Q  479 accccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatct 578  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  16788188 accccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatct 16788089  T
Q  579 gaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
     |||| | ||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  16788088 taaaactctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 16788022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 458 - 643
Target Start/End: Complemental strand, 3648978 - 3648793
Alignment:
Q  458 gggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 557  Q
    ||||||||||||||| | |||| || || | |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3648978 gggcggttctaccgtatggcgatccgggacagtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaa 3648879  T
Q  558 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctct 643  Q
    |||||||| ||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| | |||||||||    
T  3648878 aaagaaaattttgggcaatctgaaaattgtcacacgcaagtaggttttggaattttatttagcacactattgacgggttcatctct 3648793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 459 - 631
Target Start/End: Original strand, 15838270 - 15838441
Alignment:
Q  459 ggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 558  Q
    |||||||||||||| | |||||||||||||||| |||| ||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||| ||    
T  15838270 ggcggttctaccgtatggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttac-aa 15838368  T
Q  559 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 631  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  15838369 aagaaaaatttgggcaatctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgac 15838441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 453 - 645
Target Start/End: Complemental strand, 34137014 - 34136822
Alignment:
Q  453 gccatgggcggttctaccgtgtagcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatt 552  Q
    |||||||| ||||  ||||| | ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| |    
T  34137014 gccatgggtggtttcaccgtctggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacact 34136915  T
Q  553 tacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||||||||| |||||  | |||||||||||    
T  34136914 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatctctct 34136822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 4404009 - 4404178
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  4404009 gcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaa 4404108  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||| |||||| ||||||| |||||||||| ||||||||||||||||||| |||||  | |||||||||||    
T  4404109 tctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctctct 4404178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 23402109 - 23402278
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  23402109 gcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 23402208  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||||| |||||||||| | ||||||||||| |||||||||||| | |||||||||||    
T  23402209 tctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatctctct 23402278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 22 - 334
Target Start/End: Complemental strand, 29272727 - 29272412
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| |||||| ||||||||||||  |||||||| |||||| |||||   |||||   ||||||| ||||||| |||||||||||| | ||| || |    
T  29272727 tagaagaatggaagggtacattagatggatatgaaaagattcccaataaaaggatccaccagatacttaaagtaagttatgatgctttggaagaagagca 29272628  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacat 221  Q
     || ||||||||||| ||||||||||||||||||||||| ||| |||||  | | |  |   | ||||||||| ||||||||||||||||||||  ||||    
T  29272627 acaaagtgtctttctggacattgcttgttgcttcaaaggttgtgaatgggaagatgccaaatatatacttcattctcattatggccattgcataacacat 29272528  T
Q  222 catgttggagtgttggctgaaaaatgtctcataggcc---attgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaag 318  Q
    ||| | ||||| ||||||||||||| |||||||| ||   |||||||||||| |  | |||| |  || ||||| ||||||| |||||||||||||||||    
T  29272527 catctaggagtattggctgaaaaatctctcatagaccaatattgggaatatggccattatgtaatgttgcatgatttgataggggacatgggtaaagaag 29272428  T
Q  319 tcgtccgacaagaatc 334  Q
    ||||||||||||||||    
T  29272427 tcgtccgacaagaatc 29272412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 36408552 - 36408721
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  36408552 gcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaagaaaatttttggcaa 36408651  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    | |||||||| | |||||  |||||||||  |||||||||||| |||||||||| | | |||||||||||    
T  36408652 tttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatctctct 36408721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 498 - 645
Target Start/End: Original strand, 9877243 - 9877390
Alignment:
Q  498 gctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaa 597  Q
    ||||||| |||||||||||||||||||||  |||||||||| | ||||||||| |||||||||||||||||||||||||||||||||| ||||| | |||    
T  9877243 gctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaaa 9877342  T
Q  598 taggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||| | |||||||||||||||||||||| ||  |||||||||||    
T  9877343 taggtctcgaaattttatttagcacactattgtcaaattcatctctct 9877390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 476 - 645
Target Start/End: Complemental strand, 2729362 - 2729193
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||||||||||| |||||| |||||||||||||||||| ||||||| |  ||| ||||||||||||||||||| ||| |||||||||  ||| |||||    
T  2729362 gcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataaaaagaaattttttggcaa 2729263  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    | |||||| | ||| ||| ||||||||||   |||||||||||||||||||||||  | |||||||||||    
T  2729262 tttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattgatggattcatctctct 2729193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 491 - 601
Target Start/End: Original strand, 3435285 - 3435397
Alignment:
Q  491 cgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattgtc 588  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||  |||||||||||| ||    
T  3435285 cgcccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctc 3435384  T
Q  589 acacgtaaatagg 601  Q
    | ||| |||||||    
T  3435385 aaacgcaaatagg 3435397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 507 - 643
Target Start/End: Original strand, 42230971 - 42231105
Alignment:
Q  507 ataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttg 606  Q
    ||||||||||||||||| |  |||| |||||| ||||||||||  ||||||||||||||||||||||||| |||||||| ||| | | ||||||||||      
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  607 gaattttatttagcacactattgacagtttcatctct 643  Q
    ||||||||||||||||||||||||| | |||||||||    
T  42231069 gaattttatttagcacactattgacggattcatctct 42231105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 40470640 - 40470567
Alignment:
Q  495 cgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatt 568  Q
    |||||||||||||||||||||||||||||||| |||  |||||| ||||||||||| ||| ||||| |||||||    
T  40470640 cgagctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 560
Target Start/End: Complemental strand, 10397206 - 10397122
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaa 560  Q
    ||||| ||||||  ||||||| |||| ||||||||||| | ||||||||  |||||||||||||| ||||||||| ||| |||||    
T  10397206 gcgactccgggcactcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaagccgattaacacagttaaaaaaa 10397122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 35984620 - 35984720
Alignment:
Q  50 gtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctagacattgcttgt 149  Q
    ||||||||  |||||  ||||||| ||||||| ||||||| ||||||| | |||||||||  ||||| | || || ||||| ||||| ||||||||||||    
T  35984620 gtatgaaaccattcctaataaagacatccaaaagatacttaaagtaagttttgatgctttagaggaagatgagcaaagtgtttttcttgacattgcttgt 35984719  T
Q  150 t 150  Q
    |    
T  35984720 t 35984720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 412
Target Start/End: Complemental strand, 16371764 - 16371630
Alignment:
Q  278 tgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgat 377  Q
    |||||| |||||| || || |||| ||||||||||||||| | |||||||||||||| || ||   ||| || ||||| |||||||| ||||||  | ||    
T  16371764 tgtgacattacataacctggtagaagacatgggtaaagaaattgtccgacaagaatcaccaaaggagccaggcgaacgtagtaggttatggtttgtcaat 16371665  T
Q  378 gatatagttaacgttttaagagataatacggtaag 412  Q
    ||| ||||| | ||||||  ||| ||| |||||||    
T  16371664 gatgtagttcaagttttagaagacaattcggtaag 16371630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 608 - 645
Target Start/End: Complemental strand, 40470509 - 40470472
Alignment:
Q  608 aattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||||||||||||||||| | |||||||||||    
T  40470509 aattttatttagcacactattgacgggttcatctctct 40470472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 137; Significance: 3e-71; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 38 - 334
Target Start/End: Original strand, 60878 - 61174
Alignment:
Q  38 tacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttcta 137  Q
    ||||||||||  ||||||||| |||||| ||||||| |||||||| |||||| |||| ||||||||| ||||| ||||| |||| || ||||||||||||    
T  60878 tacattagattggtatgaaaagattcccaataaagagatccaaagaatacttaaagtgagctatgattctttggaggaagaggagcaaagtgtctttcta 60977  T
Q  138 gacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacatcatgttggagtgttgg 237  Q
    ||||||||||||||||||||||| |||||||||  ||| || |  ||||||||||||||||||||||| ||||||||| | |||||||||| |||| | |    
T  60978 gacattgcttgttgcttcaaaggttgtaaatgggaaaaggtcaaagaaatacttcatgctcattatggtcattgcataaatcatcatgttgaagtgctag 61077  T
Q  238 ctgaaaaatgtctcataggccattgggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
     ||||||||||||||| | |||||  ||||| || | ||||||| | |||||| ||||||||||| |||||||||||||| ||||||||| ||||||    
T  61078 ttgaaaaatgtctcattgaccattttgaatacgatagtcatgtgtcattacataacttgatagagaacatgggtaaagaactcgtccgactagaatc 61174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 5231 - 5400
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| | ||||||| ||||||||| |||||||||||||| |||||||||    
T  5231 gcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggcaa 5330  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| ||||| | |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  5331 tctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 5400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 476 - 645
Target Start/End: Original strand, 31481 - 31650
Alignment:
Q  476 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 575  Q
    |||||||| | |||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| |||    
T  31481 gcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaaaaagaaaaatttggacaa 31580  T
Q  576 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    |||||||||| |||| || |||||||||| | |||||||||| ||||||||||||||| |||||||||||    
T  31581 tctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatctctct 31650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 113; Significance: 7e-57; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 38 - 334
Target Start/End: Complemental strand, 2412 - 2113
Alignment:
Q  38 tacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttcta 137  Q
    ||||||||||| |||||| |  |||||| ||||||| ||||||| ||||||| ||||||| |||||||||||| ||||| || | || ||||||||||||    
T  2412 tacattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaagtaagttatgatgctttggaggaagagcagcaaagtgtctttcta 2313  T
Q  138 gacattgcttgttgcttcaaagggtgtaaatggacaaaagttagggaaatacttcatgctcattatggccattgcatagaacatcatgttggagtgttgg 237  Q
    ||||||||||||||||||||| | |||||||||  | | |  |   | |||||| || ||||||||||||||||||||  ||||||| | ||||||||||    
T  2312 gacattgcttgttgcttcaaaagatgtaaatgggaagatgccaaatatatacttaattctcattatggccattgcataacacatcatctaggagtgttgg 2213  T
Q  238 ctgaaaaatgtctcat-aggccatt--gggaatatgacactcatgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 334  Q
     |||||||| |||||| | |  |||  |||||||||||  | ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2212 ttgaaaaatctctcataaagaaattacgggaatatgacgattatgtgatgttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 2113  T

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Target: scaffold0041 (Bit Score: 108; Significance: 7e-54; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 498 - 645
Target Start/End: Original strand, 52948 - 53095
Alignment:
Q  498 gctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaa 597  Q
    |||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| | |||    
T  52948 gctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatgcaaa 53047  T
Q  598 taggtcttggaattttatttagcacactattgacagtttcatctctct 645  Q
    ||||||| |||||||||||||||||||||||||| | |||||||||||    
T  53048 taggtctcggaattttatttagcacactattgacgggttcatctctct 53095  T

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Target: scaffold1870 (Bit Score: 83; Significance: 5e-39; HSPs: 2)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 62 - 291
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| |||||| ||||||||||||  |||||||| |||||| ||||| | |||||   ||||||| |||||||||||||||||||| ||||| || |    
T  62 tagaagaatggaagggtacattagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagctatgatgctttggaggaagagca 161  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttag-ggaaatacttcatgctcattatggccattgcatagaaca 220  Q
     || ||||| |||||||||||||| |||||||||||||| |||  ||||| |  |||| |  || ||||| | |||||||||||||||||||||| ||||    
T  162 gcaaagtgtttttctagacattgcctgttgcttcaaaggatgtggatgga-aggagtttgaagatatactacgtgctcattatggccattgcataaaaca 260  T
Q  221 tcatgttggagtgttggctgaaaaatgtctc 251  Q
    |||| | ||||||||||||||||||| ||||    
T  261 tcatctaggagtgttggctgaaaaatctctc 291  T

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Target: scaffold1870; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 275 - 396
Target Start/End: Original strand, 330 - 451
Alignment:
Q  275 tcatgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgc 374  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||   ||| |||||| | |||||||| |||| ||      
T  330 tcatgtgacattacatgactttatagaggacatgggtaaagaagtcgtacgacaagaatcgcctaaagagccaggagaaagaagtaggttatggtgtcaa 429  T
Q  375 gatgatatagttaacgttttaa 396  Q
    |||||||||||||| |||||||    
T  430 gatgatatagttaatgttttaa 451  T

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Target: scaffold0419 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 8780 - 9009
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| |||||| ||||||||||||  |||||||| |||||| ||||| | |||||   ||||||| ||||||| |||||||||||| ||||| || |    
T  8780 tagaagaatggaagggtacattagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagttatgatgctttggaggaagagca 8879  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttag-ggaaatacttcatgctcattatggccattgcatagaaca 220  Q
     || ||||| |||||||||||||| |||||||||||||| |||  ||||| |  |||| |  || ||||| | |||||||||||||||||||||| ||||    
T  8880 gcaaagtgtttttctagacattgcctgttgcttcaaaggatgtggatgga-aggagtttgaagatatactacgtgctcattatggccattgcataaaaca 8978  T
Q  221 tcatgttggagtgttggctgaaaaatgtctc 251  Q
    |||| | ||||||||||||||||||| ||||    
T  8979 tcatctaggagtgttggctgaaaaatctctc 9009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 275 - 396
Target Start/End: Original strand, 9048 - 9169
Alignment:
Q  275 tcatgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgc 374  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||   ||| |||||| | |||||||| |||| ||      
T  9048 tcatgtgacattacatgactttatagaggacatgggtaaagaagtcgtacgacaagaatcgcctaaagagccaggagaaagaagtaggttatggtgtcaa 9147  T
Q  375 gatgatatagttaacgttttaa 396  Q
    |||||||||||||| |||||||    
T  9148 gatgatatagttaatgttttaa 9169  T

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Target: scaffold0277 (Bit Score: 71; Significance: 8e-32; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 22 - 251
Target Start/End: Complemental strand, 12564 - 12335
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| |||||| ||||||||||||  |||||||| |||||| ||||| | |||||   ||||||| |||||||||||||||||||| ||||| || |    
T  12564 tagaagaatggaagggtacattagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagctatgatgctttggaggaagagca 12465  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttag-ggaaatacttcatgctcattatggccattgcatagaaca 220  Q
     || ||||| |||||||||||||| |||||||||||||| |||  ||||| |  |||| |   | ||||||| |||||||||||||||| |||||  |||    
T  12464 gcaaagtgtttttctagacattgcctgttgcttcaaaggatgtggatgga-aggagtttgaatatatacttcgtgctcattatggccatcgcataacaca 12366  T
Q  221 tcatgttggagtgttggctgaaaaatgtctc 251  Q
    |||| | | ||||||||||||||||| ||||    
T  12365 tcatctagtagtgttggctgaaaaatctctc 12335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 22 - 251
Target Start/End: Complemental strand, 3601 - 3372
Alignment:
Q  22 tagaagattggaagcgtacattagatgagtatgaaaatattcccgataaagatatccaaaggatacttcaagtaagctatgatgctttgaaggaaaagga 121  Q
    ||||||| |||||| ||||||||||||  |||||||| |||||| ||||| | |||||   ||||||| |||||||||||||||||||| ||||| || |    
T  3601 tagaagaatggaagggtacattagatggatatgaaaagattcccaataaaaagatccaccagatacttaaagtaagctatgatgctttggaggaagagca 3502  T
Q  122 tcagagtgtctttctagacattgcttgttgcttcaaagggtgtaaatggacaaaagttag-ggaaatacttcatgctcattatggccattgcatagaaca 220  Q
     || ||||| |||||||||||||| |||||||||||||| |||  ||||  |  |||| |   | ||||||| |||||||||||||||| |||||  |||    
T  3501 gcaaagtgtttttctagacattgcctgttgcttcaaaggatgtggatgg-gaggagtttgaatatatacttcgtgctcattatggccatcgcataacaca 3403  T
Q  221 tcatgttggagtgttggctgaaaaatgtctc 251  Q
    |||| | | ||||||||||||||||| ||||    
T  3402 tcatctagtagtgttggctgaaaaatctctc 3372  T

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Target: scaffold0277; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 286 - 396
Target Start/End: Complemental strand, 3325 - 3215
Alignment:
Q  286 tacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagt 385  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||   |||||||||| | ||||| || |||| |   |||||||||||    
T  3325 tacatgacttgataaaggacatgggtaaagaagtcgtccgacaagaatcgcccaaagagcctggagaaagaagtagattatggtgtgaagatgatatagt 3226  T
Q  386 taacgttttaa 396  Q
    ||| |||||||    
T  3225 taatgttttaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 286 - 396
Target Start/End: Complemental strand, 12288 - 12178
Alignment:
Q  286 tacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaggcctggagaacgcagtaggttgtggtttcgcgatgatatagt 385  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||   |||||||||| | ||||| || |||| |   |||||||||||    
T  12288 tacatgacttgataaaggacatgggtaaagaagtcgtccgacaagaatcgcccaaagagcctggagaaagaagtagattatggtgtgaagatgatatagt 12189  T
Q  386 taacgttttaa 396  Q
    ||| |||||||    
T  12188 taatgttttaa 12178  T

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Target: scaffold0038 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 44311 - 44388
Alignment:
Q  83 gatacttcaagtaagctatgatgctttgaaggaaaaggatcagagtgtctttctagacattgcttgttgcttcaaagg 160  Q
    ||||||| ||||||||| |||||||||| || || | || |||| ||| ||||| ||||||||||| |||||||||||    
T  44311 gatacttaaagtaagctttgatgctttggagaaagatgagcagaatgtttttctcgacattgcttgctgcttcaaagg 44388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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