View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11278_low_6 (Length: 719)
Name: NF11278_low_6
Description: NF11278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11278_low_6 |
 |  |
|
| [»] scaffold0012 (1 HSPs) |
 |  |  |
|
| [»] scaffold0148 (1 HSPs) |
 |  |  |
|
| [»] scaffold0076 (1 HSPs) |
 |  |  |
|
| [»] scaffold1668 (1 HSPs) |
 |  |  |
|
| [»] scaffold0006 (3 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 570; Significance: 0; HSPs: 34)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 570; E-Value: 0
Query Start/End: Original strand, 1 - 700
Target Start/End: Complemental strand, 5700088 - 5699386
Alignment:
| Q |
1 |
gagagacttcaatcatttttcttcatacctt----tgattctcattggcctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtg |
96 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
5700088 |
gagagacttcaatcatttttcttcataccttctgttgattctcattggcctatttatgcacagcccaaacttccttgattttaggatcactagtcacgtg |
5699989 |
T |
 |
| Q |
97 |
tccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataacaaaagatggtagaaattagggtttgttgcttgtt |
196 |
Q |
| |
|
| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| |
|
|
| T |
5699988 |
ttcatttaccttaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataactgaaaatggtagaaattagggtttgttgtttgtt |
5699889 |
T |
 |
| Q |
197 |
gaaattagtttcttgtaatctttttgtatctcgttgatagtgaagtggagagatctctccccagagtatgttattgttggaccaaatcaagaaaatattt |
296 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
5699888 |
gaaattaatttcttgtaatctttttgtatctcgttgatagtgaagtggagagatctctccccagagtatgttattgttggaccgaatcaagaaaatattt |
5699789 |
T |
 |
| Q |
297 |
cttgtgtgtttgtttcttttctcttctatcttatggttgctgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttgac |
396 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5699788 |
cttgtgtgtttgtttcttttctcttttatcttatcgttgctgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttgac |
5699689 |
T |
 |
| Q |
397 |
ttgttgttgcttaaggttactttgatannnnnnngacaaaggttactttgatattgattactacttttctttgctccacacatttaagaatattggtatg |
496 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||| |||||||| | ||||| |||| |
|
|
| T |
5699688 |
ttgttgttgcttaaggttactttgatatttttttgacaaaggttactttaatattgattactatttttctttgctccaaacatttaaaattattgatatg |
5699589 |
T |
 |
| Q |
497 |
attttgagtccaaatacacacctaaacacctccattatccaaatcgacaaaaaactaaaactattatcattccttcatcaaagatagctcaaataatgca |
596 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5699588 |
attttgagtccaaatacacacctaaacacctccattatccaaatcgac-taaaactaaaactattatcattccttcatcaaagatagctcaaataatgca |
5699490 |
T |
 |
| Q |
597 |
tgaaatcgattatcaaataatatcattactttcacatattgaacatattatctggtcctaccatgatttctaataatatttatcctatctatttatttat |
696 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
5699489 |
tgaaatcaattatcaaataatatcattactttcacatattgaacacattatctggtcctaccatgatttctaataatatttatcctatctatctatttat |
5699390 |
T |
 |
| Q |
697 |
tgtg |
700 |
Q |
| |
|
|||| |
|
|
| T |
5699389 |
tgtg |
5699386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 12324544 - 12324430
Alignment:
| Q |
49 |
tttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgcta |
148 |
Q |
| |
|
|||||||||||| ||| || |||||||||| |||||| | || || ||||||||||||||| |||||||||| | ||| |||||||||| |||||||| |
|
|
| T |
12324544 |
tttatgcacaactcaaggttacttgattttaagatcacacgccacgtctccatttacctcaactaattatgttaggtcaaatgtatttcctcatatgcta |
12324445 |
T |
 |
| Q |
149 |
ttttgaatcataaca |
163 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
12324444 |
ttttgaatcataaca |
12324430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 8485881 - 8485966
Alignment:
| Q |
74 |
attttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcat |
159 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| | |||||||| |||||||| |
|
|
| T |
8485881 |
attttaagaccactagtcatgtgtccatttacctcaatcaattatgttatgccaaatgtatatcctcaaatgctattctgaatcat |
8485966 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 31380618 - 31380499
Alignment:
| Q |
46 |
ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaacc--aattatgttatgccaagtgtatttcctaata |
143 |
Q |
| |
|
||||||||||||||| ||| ||| ||||||||||||| | ||| || ||||||||||| |||||| ||||||||||||| |||||||||||| ||| |
|
|
| T |
31380618 |
ctatttatgcacaactcaaggttcattgattttaggatgattagccacgtgtccatttatatcaaccccaattatgttatgctaagtgtatttccacata |
31380519 |
T |
 |
| Q |
144 |
tgctattttgaatcataaca |
163 |
Q |
| |
|
||||| |||||||||||||| |
|
|
| T |
31380518 |
tgctactttgaatcataaca |
31380499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 306 - 392
Target Start/End: Original strand, 28770878 - 28770964
Alignment:
| Q |
306 |
ttgtttcttttctcttctatcttatggttgctgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgt |
392 |
Q |
| |
|
||||||| |||||||||| | |||| || |||||||| || |||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
28770878 |
ttgtttcctttctcttctttattatattttttgctttgattatgcttgtggtgttgcttcacacttagatctaggtctatttgttgt |
28770964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 2869829 - 2869886
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
||||||||||| |||| |||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
2869829 |
tgctttgaatatgcttatggtgttgctctacacttagatttaggtctatttgttgttg |
2869886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 394
Target Start/End: Complemental strand, 3277965 - 3277908
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
||||||||||| | |||| ||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
3277965 |
tgctttgaatatgtttgtagtgttgcttcacacttagatctagatctatttgttgttg |
3277908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 436 - 479
Target Start/End: Complemental strand, 12123477 - 12123434
Alignment:
| Q |
436 |
aggttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
12123477 |
aggttactttgatattggttactactttcctttgctccacacat |
12123434 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 8390284 - 8390330
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8390284 |
tgctttgattatgcttgtggtgttgctctacacttagatctaggtct |
8390330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 11151476 - 11151438
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
11151476 |
actttgatattgattactacttttatttgctccacacat |
11151438 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 23078606 - 23078663
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||||||||| | ||| |||||| |
|
|
| T |
23078606 |
tgctttgattatgcttgtggtgttgctctacacttagatctaggtatgttttttgttg |
23078663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 408
Target Start/End: Original strand, 14699129 - 14699198
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttgacttgttgttgctt |
408 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| || |||||| |||||||||||| |
|
|
| T |
14699129 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtctgctttttgttg--ttgttgttgctt |
14699198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 17865165 - 17865121
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggt |
381 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||||||||| |
|
|
| T |
17865165 |
tgctttgattatgcttgtggtgttgctctacacttagatctaggt |
17865121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 479
Target Start/End: Original strand, 29868154 - 29868194
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
29868154 |
ttactttaaaattgattactacttttctttgctccacacat |
29868194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 479
Target Start/End: Original strand, 39285120 - 39285160
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
39285120 |
ttactttgaaattggttactacttttctttgctccacacat |
39285160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 435 - 493
Target Start/End: Original strand, 4561352 - 4561411
Alignment:
| Q |
435 |
aaggttactttgatattgattactacttttc-tttgctccacacatttaagaatattggt |
493 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||| ||||||||| |||| ||||||| |
|
|
| T |
4561352 |
aaggttactttgatattggttactacttttcttttgttccacacatctaagtttattggt |
4561411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 723627 - 723589
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
723627 |
actttgatattggttactactttcctttgctccacacat |
723589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 5723136 - 5723098
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
5723136 |
actttgatattggttactactttactttgctccacacat |
5723098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 6594884 - 6594846
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
6594884 |
actttgatattggttactactttactttgctccacacat |
6594846 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 8040022 - 8039976
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
8040022 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtct |
8039976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 11067588 - 11067626
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
11067588 |
actttgatattggttactactttcctttgctccacacat |
11067626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 11183936 - 11183882
Alignment:
| Q |
109 |
aaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca |
163 |
Q |
| |
|
||||||||| || |||||||||||||| || ||||||||||| ||||||||||| |
|
|
| T |
11183936 |
aaccaattacattttgccaagtgtattttctcatatgctatttagaatcataaca |
11183882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 20522182 - 20522136
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| |||||||||||||| |||| |
|
|
| T |
20522182 |
tgctttgattatgcttgtggtgttgctctacacttagatctatgtct |
20522136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 31056004 - 31055958
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
31056004 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtct |
31055958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 33528756 - 33528802
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| |||| |||||||||||||| |
|
|
| T |
33528756 |
tgctttgattatgcttgtggtgttgctctacatttagatctaggtct |
33528802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 34139653 - 34139615
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
34139653 |
actttgatattggttactactttcctttgctccacacat |
34139615 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 349 - 383
Target Start/End: Complemental strand, 34388809 - 34388775
Alignment:
| Q |
349 |
gcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
34388809 |
gcttgtggtgttgctctacacttagatctaggtct |
34388775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 38312528 - 38312566
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
38312528 |
actttgatattggttactactttcctttgctccacacat |
38312566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 45100042 - 45100080
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
45100042 |
actttgatattggttactactttcctttgctccacacat |
45100080 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 10445579 - 10445636
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
|||||||| || ||||||||| ||||| ||||||||||| ||||||| ||| |||||| |
|
|
| T |
10445579 |
tgctttgattatgcttgtggttttgctctacacttagatttaggtctgttttttgttg |
10445636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 12632507 - 12632466
Alignment:
| Q |
349 |
gcttgtggtgttgctttacacttagatctaggtctatttgtt |
390 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||| |||||| |
|
|
| T |
12632507 |
gcttgtggtgttgcttgacacttatatctaggtctgtttgtt |
12632466 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 479
Target Start/End: Original strand, 13122044 - 13122085
Alignment:
| Q |
438 |
gttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
13122044 |
gttattttgatattgattagtacttttctttactccacacat |
13122085 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 442 - 479
Target Start/End: Complemental strand, 33162333 - 33162296
Alignment:
| Q |
442 |
ctttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
33162333 |
ctttgatattggttactactttcctttgctccacacat |
33162296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 484
Target Start/End: Complemental strand, 36191139 - 36191098
Alignment:
| Q |
443 |
tttgatattgattactacttttctttgctccacacatttaag |
484 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
36191139 |
tttgatattggttactgattttctttgctccacacatttaag |
36191098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 78; Significance: 6e-36; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 34272361 - 34272244
Alignment:
| Q |
46 |
ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatg |
145 |
Q |
| |
|
|||||||||||||| | || | ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| || ||||| |
|
|
| T |
34272361 |
ctatttatgcacaatctaagcatccttgattttaggatcactagtcacatgtccatttacctaaaccaattatgttatgccaaatgtattttctcatatg |
34272262 |
T |
 |
| Q |
146 |
ctattttgaatcataaca |
163 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
34272261 |
ctattttgaatcataaca |
34272244 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 15027014 - 15027130
Alignment:
| Q |
46 |
ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatg |
145 |
Q |
| |
|
|||| |||||||||| || ||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||| ||||||| || || || |
|
|
| T |
15027014 |
ctatatatgcacaacttaaggttccttgattttaggatcactagccgagtgtc-atttacctcaaccaattatgttatgccaaatgtattttctcatgtg |
15027112 |
T |
 |
| Q |
146 |
ctattttgaatcataaca |
163 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
15027113 |
ttattttggatcataaca |
15027130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 350 - 420
Target Start/End: Complemental strand, 30899810 - 30899742
Alignment:
| Q |
350 |
cttgtggtgttgctttacacttagatctaggtctatttgttgttgacttgttgttgcttaaggttactttg |
420 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||| |||||||| |||||||||||| ||| ||||||| |
|
|
| T |
30899810 |
cttgtggtgttgcttaacactttgatctaggtctatgtgttgttg--ttgttgttgcttgaggctactttg |
30899742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 3880262 - 3880216
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
3880262 |
tgctttgattatgcttgtggtgttgctttacacttagatttaggtct |
3880216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 12084311 - 12084357
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
12084311 |
tgctttgattatgcttgtggtgttgctctacacttagatctaggtct |
12084357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 419
Target Start/End: Complemental strand, 2630193 - 2630110
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg-acttgttgttgcttaaggttacttt |
419 |
Q |
| |
|
|||||| |||| ||||||||||||||| | ||||||||| |||| ||||||||| ||| |||||||||||| ||| |||||| |
|
|
| T |
2630193 |
tgctttaaatatgcttgtggtgttgctctgcacttagatttaggcctatttgtttttgttgttgttgttgcttgaggctacttt |
2630110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 349 - 383
Target Start/End: Complemental strand, 14520179 - 14520145
Alignment:
| Q |
349 |
gcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
14520179 |
gcttgtggtgttgctctacacttagatctaggtct |
14520145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 19588708 - 19588662
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
19588708 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtct |
19588662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 30682803 - 30682765
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
30682803 |
actttgatattggttactactttcctttgctccacacat |
30682765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 39468429 - 39468391
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
39468429 |
actttgatattggttactactttcctttgctccacacat |
39468391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 42428311 - 42428273
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
42428311 |
actttgatattggttactactttcctttgctccacacat |
42428273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 230 - 313
Target Start/End: Original strand, 30793237 - 30793324
Alignment:
| Q |
230 |
ttgatagtgaagtggagagatctct---ccccagagtatgttattgttggaccaaatcaagaaaatatttctt-gtgtgtttgtttct |
313 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||| || ||||||||||| || | | ||| ||||||| |||||||||||||| |
|
|
| T |
30793237 |
ttgatagtgaagtggagagatctctctcccctagagtaagtcattgttggaccgaacaaggtaaacatttcttggtgtgtttgtttct |
30793324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 394
Target Start/End: Complemental strand, 34842554 - 34842509
Alignment:
| Q |
349 |
gcttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| | ||| |||||| |
|
|
| T |
34842554 |
gcttgtggtgttgcttcacacttagatctaggtttgtttattgttg |
34842509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 18)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 49 - 165
Target Start/End: Complemental strand, 6919437 - 6919321
Alignment:
| Q |
49 |
tttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgcta |
148 |
Q |
| |
|
||||||||||| |||||||| ||| ||||||| |||||||| || ||||||||| |||||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
6919437 |
tttatgcacaatccaaactttcttaattttagtatcactagccacatgtccatttgcctcaaccaattatgttatgccaagtgtattttcccatatgcta |
6919338 |
T |
 |
| Q |
149 |
ttttgaatcataacaaa |
165 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
6919337 |
tattgaatcataacaaa |
6919321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 45 - 156
Target Start/End: Complemental strand, 29181602 - 29181491
Alignment:
| Q |
45 |
cctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatat |
144 |
Q |
| |
|
|||||||||||| | |||||||||| ||||||||||||||||||| || ||| ||||| ||||||||| | ||| |||||||||||||||| | |||| |
|
|
| T |
29181602 |
cctatttatgcatatcccaaacttctttgattttaggatcactagccacttgttcatttgcctcaaccagtaatgacatgccaagtgtatttcttcatat |
29181503 |
T |
 |
| Q |
145 |
gctattttgaat |
156 |
Q |
| |
|
|||||||||||| |
|
|
| T |
29181502 |
gctattttgaat |
29181491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 394
Target Start/End: Complemental strand, 22963662 - 22963605
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||||||||||| ||| |||||| |
|
|
| T |
22963662 |
tgctttgattatgcttgtggtgttgctctacacttagatctaggtctgttttttgttg |
22963605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 23824731 - 23824788
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||||||||||| ||| |||||| |
|
|
| T |
23824731 |
tgctttgattatgcttgtggtgttgctctacacttagatctaggtctgttttttgttg |
23824788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 5017603 - 5017649
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
5017603 |
tgctttgattatgcttgtggtgttgctctacacttagatctaggtct |
5017649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 8171206 - 8171134
Alignment:
| Q |
66 |
cttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcct |
139 |
Q |
| |
|
||||||||||||||| |||||||| || |||| |||| | ||||||||||| |||||| |||||||||||||| |
|
|
| T |
8171206 |
cttccttgattttag-atcactagccacatgtcaatttgcttcaaccaattaagttatgacaagtgtatttcct |
8171134 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 10086146 - 10086065
Alignment:
| Q |
82 |
atcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca |
163 |
Q |
| |
|
|||||||| || |||||||||| ||||||||||||| || | | | |||||||| || || |||||||||||||||||||| |
|
|
| T |
10086146 |
atcactagccacatgtccatttatctcaaccaattatatttttcaatgtgtattttctcatgtgctattttgaatcataaca |
10086065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 18232807 - 18232763
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggt |
381 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||||||||| |
|
|
| T |
18232807 |
tgctttgattatgcttgtggtgttgctctacacttagatctaggt |
18232763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 30063047 - 30062991
Alignment:
| Q |
95 |
tgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattt |
151 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||| || || |||||||| |
|
|
| T |
30063047 |
tgtccatttacctcaaccaattacattttgccaagtgtattttctcatgtgctattt |
30062991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 516
Target Start/End: Original strand, 4045693 - 4045772
Alignment:
| Q |
438 |
gttactttgatattgattactacttttctttgctccacacatttaagaatattggtatg-attttgagtccaaatacaca |
516 |
Q |
| |
|
||||||||||||||| |||||||||| || || ||||||| ||||| ||||||| || ||||||||||||||| |||| |
|
|
| T |
4045693 |
gttactttgatattggttactactttctttaacttcacacatataagattattggtgtgaattttgagtccaaattcaca |
4045772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 4629915 - 4629869
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
4629915 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtct |
4629869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 5408950 - 5408912
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
5408950 |
actttgatattggttactactttcctttgctccacacat |
5408912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 5413275 - 5413237
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
5413275 |
actttgatattggttactactttcctttgctccacacat |
5413237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 9182911 - 9182873
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
9182911 |
actttgatattggttactactttcctttgctccacacat |
9182873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 10077300 - 10077346
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
10077300 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtct |
10077346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 439 - 477
Target Start/End: Complemental strand, 28137293 - 28137255
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacac |
477 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
28137293 |
ttactttgatattggttactactttcctttgctccacac |
28137255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 499
Target Start/End: Original strand, 30519238 - 30519287
Alignment:
| Q |
449 |
attgattactacttttctttgctccacacatttaagaatattggtatgatt |
499 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
30519238 |
attgattacta-ttttctttgctccacacatttaaatttattggtatgatt |
30519287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 31404555 - 31404517
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
31404555 |
actttgatattgattactattttcctttgctccacacat |
31404517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 25)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 32471262 - 32471378
Alignment:
| Q |
46 |
ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatg |
145 |
Q |
| |
|
|||||||||||||| |||| ||||||||||||||||||||||| | ||||||||| ||||||||||| || |||||||||| ||||||||| |||| |
|
|
| T |
32471262 |
ctatttatgcacaatccaagcttccttgattttaggatcactaactacatgtccatttgcctcaaccaataatattatgccaagcgtatttcctcatatt |
32471361 |
T |
 |
| Q |
146 |
ctattttgaatcataac |
162 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
32471362 |
ctattttgaatcataac |
32471378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 39773267 - 39773170
Alignment:
| Q |
66 |
cttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca |
163 |
Q |
| |
|
||||||| |||||||||||||||| || ||||||||| |||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||||| |
|
|
| T |
39773267 |
cttccttaattttaggatcactagccacatgtccatttttctcaaccaattatgttatgccatgtgtaattccttatatgtcattttgaatcataaca |
39773170 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 29367426 - 29367543
Alignment:
| Q |
46 |
ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatg |
145 |
Q |
| |
|
||||||||| | |||||||| ||| || |||||||||| ||||| | || |||||||| |||||||||||| |||| | ||||||||||||| |||| |
|
|
| T |
29367426 |
ctatttatgtataacccaaagttctttaattttaggattactagccgcgtacccatttacttcaaccaattatattatactaagtgtatttcctcatata |
29367525 |
T |
 |
| Q |
146 |
ctattttgaatcataaca |
163 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
29367526 |
ttattttgaatcataaca |
29367543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 29991341 - 29991379
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
29991341 |
actttgatattggttactacttttctttgctccacacat |
29991379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 479
Target Start/End: Complemental strand, 31105282 - 31105242
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
31105282 |
ttactttgatattgattactactttcctttactccacacat |
31105242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 503
Target Start/End: Complemental strand, 30843369 - 30843302
Alignment:
| Q |
437 |
ggttactttgatattgattactacttttc-tttgctccacacatttaagaatattggtatgattttga |
503 |
Q |
| |
|
|||||||||||||||| |||||||||| | |||||||||||| | |||| ||||||| ||||||||| |
|
|
| T |
30843369 |
ggttactttgatattggttactactttccttttgctccacacttctaagtttattggtgtgattttga |
30843302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 55910 - 55864
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| || |||||||||||||||| |
|
|
| T |
55910 |
tgctttgattatgcttgtggtgttgctctatacttagatctaggtct |
55864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 4796802 - 4796848
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
4796802 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtct |
4796848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 475
Target Start/End: Original strand, 8153625 - 8153659
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccac |
475 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |
|
|
| T |
8153625 |
actttgatattgattactactttcctttgctccac |
8153659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 18126934 - 18126972
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
18126934 |
actttgatattgattactactttcctttactccacacat |
18126972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 20284051 - 20284005
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
20284051 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtct |
20284005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 479
Target Start/End: Original strand, 23344249 - 23344291
Alignment:
| Q |
437 |
ggttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||| ||||||| |||||||||| ||||||||||||||| |
|
|
| T |
23344249 |
ggttacttggatattggttactactttcctttgctccacacat |
23344291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 23555329 - 23555367
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
23555329 |
actttgatattggttactactttcctttgctccacacat |
23555367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 442 - 476
Target Start/End: Complemental strand, 24525385 - 24525351
Alignment:
| Q |
442 |
ctttgatattgattactacttttctttgctccaca |
476 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |
|
|
| T |
24525385 |
ctttgatattgattactacttttctttgctacaca |
24525351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 25766837 - 25766799
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
25766837 |
actttgttattggttactacttttctttgctccacacat |
25766799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 29159765 - 29159719
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
29159765 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtct |
29159719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 35854204 - 35854242
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
35854204 |
actttgatattggttactactttcctttgctccacacat |
35854242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 47676017 - 47675979
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
47676017 |
actttgatattggttactactttcctttgctccacacat |
47675979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 48489719 - 48489757
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
48489719 |
actttgatattggttactactttcctttgctccacacat |
48489757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 49091624 - 49091578
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| |||||||| |||||||||| |
|
|
| T |
49091624 |
tgctttgattatgcttgtggtgttgctctacacttaaatctaggtct |
49091578 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 476
Target Start/End: Complemental strand, 495870 - 495833
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccaca |
476 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
495870 |
ttactttgatattggttactactttcctttgctccaca |
495833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 2647831 - 2647888
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
|||||||| || ||||||||||||||| || |||||||| ||||||| ||| |||||| |
|
|
| T |
2647831 |
tgctttgattatgcttgtggtgttgctctaaacttagatttaggtctgttttttgttg |
2647888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 506
Target Start/End: Complemental strand, 23564953 - 23564884
Alignment:
| Q |
437 |
ggttactttgatattgattactacttttctttgctccacacatttaagaatattggtatgattttgagtc |
506 |
Q |
| |
|
|||||||||||||||| | |||||||||||| |||||||||| || | |||| || |||||||||||| |
|
|
| T |
23564953 |
ggttactttgatattggtcactacttttcttcactccacacatctatgtttattagtgtgattttgagtc |
23564884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 442 - 479
Target Start/End: Complemental strand, 36146291 - 36146254
Alignment:
| Q |
442 |
ctttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
36146291 |
ctttgatattggttactactttcctttgctccacacat |
36146254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 46516445 - 46516502
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
|||||||| || |||| |||||||||||||||||||||| || |||| ||| |||||| |
|
|
| T |
46516445 |
tgctttgattatgcttttggtgttgctttacacttagatttaagtctgttttttgttg |
46516502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 59; Significance: 1e-24; HSPs: 21)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 32848074 - 32848192
Alignment:
| Q |
46 |
ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatg |
145 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| || || ||| ||||||||||||||||| |||||||||||| |||| || | ||||| |
|
|
| T |
32848074 |
ctatttatgcacaatccaaacttccttgattttaggatcatgagccacatgttcatttacctcaaccaatgatgttatgccaaatgtaattttttatatg |
32848173 |
T |
 |
| Q |
146 |
ctattttgaatcataacaa |
164 |
Q |
| |
|
| | ||||||||||||||| |
|
|
| T |
32848174 |
caaatttgaatcataacaa |
32848192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 9617997 - 9618111
Alignment:
| Q |
49 |
tttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgcta |
148 |
Q |
| |
|
||||||||||| ||||||||| |||||| |||||||||||| || | ||| ||| ||||||||||||||| |||| ||| |||||||| | |||||||| |
|
|
| T |
9617997 |
tttatgcacaatccaaacttcattgattctaggatcactagccacatctccctttgcctcaaccaattatgatatgtcaaatgtatttcttcatatgcta |
9618096 |
T |
 |
| Q |
149 |
ttttgaatcataaca |
163 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
9618097 |
ttttagatcataaca |
9618111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 17011727 - 17011821
Alignment:
| Q |
67 |
ttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca |
163 |
Q |
| |
|
||||||||||||||||||||||| || ||| | ||||||||||||||||||||||||||||||||| | || || |||||||||| ||||||||| |
|
|
| T |
17011727 |
ttccttgattttaggatcactagccaagtgaca--ttacctcaaccaattatgttatgccaagtgtatcttctcatttgctattttggatcataaca |
17011821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 17545474 - 17545380
Alignment:
| Q |
67 |
ttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca |
163 |
Q |
| |
|
||||||||||||||||||||||| || ||| | ||||||||||||||||||||||||||||||||| | || || |||||||||| ||||||||| |
|
|
| T |
17545474 |
ttccttgattttaggatcactagccaagtgaca--ttacctcaaccaattatgttatgccaagtgtatcttctcatttgctattttggatcataaca |
17545380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 47 - 161
Target Start/End: Original strand, 39721287 - 39721403
Alignment:
| Q |
47 |
tatttatgcacaacccaaacttccttgattttaggatcact--agtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatat |
144 |
Q |
| |
|
|||||||||||||| ||| || |||||||||| ||||| | || ||||| |||||||||||| ||||||||| ||||| ||||||||||| | || | |
|
|
| T |
39721287 |
tatttatgcacaactcaagttttcttgattttaagatcattgtagccatgtatccatttacctcgaccaattatattatgtcaagtgtattttttcatgt |
39721386 |
T |
 |
| Q |
145 |
gctattttgaatcataa |
161 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
39721387 |
gctattttgaatcataa |
39721403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 340 - 394
Target Start/End: Original strand, 5990699 - 5990753
Alignment:
| Q |
340 |
tttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
|||||||| ||||||||| ||| | ||||||||||| |||||||||||||||||| |
|
|
| T |
5990699 |
tttgaatatgcttgtggttttgttctacacttagatttaggtctatttgttgttg |
5990753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 516
Target Start/End: Complemental strand, 32902073 - 32901992
Alignment:
| Q |
436 |
aggttactttgatattgattactacttttcttt-gctccacacatttaagaatattggtatgattttgagtccaaatacaca |
516 |
Q |
| |
|
||||| |||||||||| ||||||||| ||||| ||||||||||| |||| ||||||| ||||||||||||| ||| |||| |
|
|
| T |
32902073 |
aggttgctttgatattagttactacttctcttttgctccacacatctaagtttattggtctgattttgagtccgaattcaca |
32901992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 479
Target Start/End: Complemental strand, 1292351 - 1292311
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
1292351 |
ttactttgatattgtttactacttttctttgctccccacat |
1292311 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 479
Target Start/End: Complemental strand, 12702513 - 12702473
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
12702513 |
ttactttgatattggttactactttcctttgctccacacat |
12702473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 479
Target Start/End: Complemental strand, 19491585 - 19491545
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
19491585 |
ttactttgatattgattaatactttcctttgctccacacat |
19491545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 479
Target Start/End: Complemental strand, 41366500 - 41366460
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
41366500 |
ttactttgatattggttactactttcctttgctccacacat |
41366460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 394
Target Start/End: Original strand, 7493210 - 7493253
Alignment:
| Q |
351 |
ttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
||||||||||||| ||||||||||| ||| |||||||||||||| |
|
|
| T |
7493210 |
ttgtggtgttgctctacacttagatttagatctatttgttgttg |
7493253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 479
Target Start/End: Original strand, 8154064 - 8154106
Alignment:
| Q |
437 |
ggttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||||||||||||||||||||||| |||| || ||||||| |
|
|
| T |
8154064 |
ggttactttgatattgattactactttcctttacttcacacat |
8154106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 15213074 - 15213112
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
15213074 |
actttgatattggttactactttcctttgctccacacat |
15213112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 26403365 - 26403411
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
26403365 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtct |
26403411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 30143628 - 30143666
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
30143628 |
actttgatattggttactactttcctttgctccacacat |
30143666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 34254211 - 34254173
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
34254211 |
actttgatattggttactactttcctttgctccacacat |
34254173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 476
Target Start/End: Complemental strand, 1345258 - 1345221
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccaca |
476 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
1345258 |
ttactttgatattggttactactttcctttgctccaca |
1345221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 442 - 479
Target Start/End: Original strand, 5689556 - 5689593
Alignment:
| Q |
442 |
ctttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
5689556 |
ctttgatattggttactactttcctttgctccacacat |
5689593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 516
Target Start/End: Complemental strand, 11711889 - 11711808
Alignment:
| Q |
436 |
aggttactttgatattgattactacttttcttt-gctccacacatttaagaatattggtatgattttgagtccaaatacaca |
516 |
Q |
| |
|
|||||||||| || ||| |||||||||| |||| ||||||||||| |||| ||||||| | ||||||||||| ||| |||| |
|
|
| T |
11711889 |
aggttacttttatcttggttactactttccttttgctccacacatctaagtttattggtgtaattttgagtccgaattcaca |
11711808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 476
Target Start/End: Original strand, 40321361 - 40321398
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccaca |
476 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
40321361 |
ttactttgatattgattgctactttcctttgctccaca |
40321398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 21)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 45 - 168
Target Start/End: Complemental strand, 45610659 - 45610535
Alignment:
| Q |
45 |
cctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatat |
144 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||| ||||||||| | |||| |||| ||||||| |||||| |||||||||||||| || || ||| |
|
|
| T |
45610659 |
cctatttatgcacaaccaaaccttccttgatcttagaatcactagttacatgtctatttgcctcaacaaattatattatgccaagtgtaattacttctat |
45610560 |
T |
 |
| Q |
145 |
g-ctattttgaatcataacaaaaga |
168 |
Q |
| |
|
| | | ||||||||||||||||||| |
|
|
| T |
45610559 |
gtccaatttgaatcataacaaaaga |
45610535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 337 - 391
Target Start/End: Complemental strand, 37781825 - 37781771
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttg |
391 |
Q |
| |
|
||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
37781825 |
tgctttgaatatgcttgtggtgttgcttcacacttagatctaggtctatttgttg |
37781771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 5842125 - 5842204
Alignment:
| Q |
46 |
ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgc |
125 |
Q |
| |
|
||||||||| |||| | |||||||||| ||||||| |||| |||||||||| ||||||||||||| ||| ||||| |||| |
|
|
| T |
5842125 |
ctatttatgtacaatctaaacttccttcattttagtatcaatagtcatgtgcccatttacctcaatcaaatatgtgatgc |
5842204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 5198896 - 5198982
Alignment:
| Q |
50 |
ttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtattt |
136 |
Q |
| |
|
||||||| || |||| ||||| ||||||| |||||||| || ||||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
5198896 |
ttatgcataatccaagcttccatgattttttaatcactagccacatgtccatttgcctcaaccaattatgttatgccgagtgtattt |
5198982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 408
Target Start/End: Original strand, 5269326 - 5269394
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttgacttgttgttgctt |
408 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||||| |
|
|
| T |
5269326 |
tgctttgattatgcttgtggtgttgctctacacttagatctaggtatattt-ttgttg--ttgttgttgctt |
5269394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 337 - 387
Target Start/End: Complemental strand, 10047341 - 10047291
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctattt |
387 |
Q |
| |
|
|||||||| || ||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
10047341 |
tgctttgattatgcttgtggtgttgctctacacttagatctatgtctattt |
10047291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 16630817 - 16630859
Alignment:
| Q |
339 |
ctttgaataagcttgtggtgttgctttacacttagatctaggt |
381 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
16630817 |
ctttgattatgcttgtggtgttgctttacacttagatctaggt |
16630859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 38152573 - 38152619
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
38152573 |
tgctttgattatgcttgtggtgttgctatacacttagatctaggtct |
38152619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 23406586 - 23406518
Alignment:
| Q |
95 |
tgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca |
163 |
Q |
| |
|
|||| ||||| |||||||||||| || | |||||||||||| || || |||||||||||||||||||| |
|
|
| T |
23406586 |
tgtctatttagctcaaccaattacatttttccaagtgtattttctcatgtgctattttgaatcataaca |
23406518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 479
Target Start/End: Complemental strand, 48893525 - 48893485
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
48893525 |
ttactttgatattggttactactttcctttgctccacacat |
48893485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 4848810 - 4848723
Alignment:
| Q |
50 |
ttatgcacaacccaaacttccttgattttagga-tcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtattt |
136 |
Q |
| |
|
||||||| || |||| ||||||||||||| | ||||||| || ||||||||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
4848810 |
ttatgcataatccaagcttccttgatttttttaatcactagccacatgtccatttgcgtcaaccaattatgttatgccaaatgtattt |
4848723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 436 - 478
Target Start/End: Complemental strand, 5207735 - 5207693
Alignment:
| Q |
436 |
aggttactttgatattgattactacttttctttgctccacaca |
478 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
5207735 |
aggttactttgatatcaattactactttcctttgctccacaca |
5207693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 5369962 - 5369924
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
5369962 |
actttgatattgattactactttcctttactccacacat |
5369924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 5872105 - 5872143
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
5872105 |
actttgatattggttactactttcctttgctccacacat |
5872143 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 25862157 - 25862203
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
25862157 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtct |
25862203 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 29999709 - 29999671
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
29999709 |
actttgatattggttactactttcctttgctccacacat |
29999671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 37740913 - 37740951
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
37740913 |
actttgatattgattactactttcctgtgctccacacat |
37740951 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 46147276 - 46147238
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
46147276 |
actttgatattggttactactttcctttgctccacacat |
46147238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 48143336 - 48143374
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
48143336 |
actttgatattggttactactttcctttgctccacacat |
48143374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 56178516 - 56178478
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
56178516 |
actttgatattggttactactttcctttgctccacacat |
56178478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 390
Target Start/End: Original strand, 42599709 - 42599762
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgtt |
390 |
Q |
| |
|
|||||||| || ||||||||||||||| |||| |||||||||||| | |||||| |
|
|
| T |
42599709 |
tgctttgattatgcttgtggtgttgctctacatttagatctaggtttgtttgtt |
42599762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 27)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 29274555 - 29274471
Alignment:
| Q |
78 |
taggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca |
163 |
Q |
| |
|
|||||||||| | || ||||||||| ||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||| |
|
|
| T |
29274555 |
taggatcactggccacatgtccatttgtctcaaccaaatatgttatgccaagtgtatttccttata-gatattttgaatcataaca |
29274471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 437 - 516
Target Start/End: Complemental strand, 37282581 - 37282501
Alignment:
| Q |
437 |
ggttactttgatattgattactacttttcttt-gctccacacatttaagaatattggtatgattttgagtccaaatacaca |
516 |
Q |
| |
|
||||||||| ||||| |||| ||||||||||| |||||||||||||||| ||||||| ||||||||||||| ||| |||| |
|
|
| T |
37282581 |
ggttactttcatattaattattacttttcttttgctccacacatttaagtttattggtgtgattttgagtccgaattcaca |
37282501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 47704071 - 47704128
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
|||||||| ||| |||||||||||||| ||||||||||| ||||||||||| |||||| |
|
|
| T |
47704071 |
tgctttgattaaacttgtggtgttgctctacacttagatttaggtctattttttgttg |
47704128 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 439 - 479
Target Start/End: Complemental strand, 23555153 - 23555113
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
23555153 |
ttactttgacattgattactacttttctttgctccacacat |
23555113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 32897322 - 32897267
Alignment:
| Q |
105 |
cctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcata |
160 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| || |||| |||||||||||||| |
|
|
| T |
32897322 |
cctcaaccaattctgttatgccaagtgtattttctcatatagtattttgaatcata |
32897267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 478
Target Start/End: Original strand, 10925510 - 10925547
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacaca |
478 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10925510 |
actttgatattgattactactttcctttgctccacaca |
10925547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 394
Target Start/End: Complemental strand, 29651773 - 29651716
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
|||||||| || ||||||||||||||| |||||||||||||| |||| ||| |||||| |
|
|
| T |
29651773 |
tgctttgattatgcttgtggtgttgctctacacttagatctaagtctgttttttgttg |
29651716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 479
Target Start/End: Complemental strand, 834052 - 834012
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
834052 |
ttactttgatattggttactactttcctttgctccacacat |
834012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 479
Target Start/End: Original strand, 41361196 - 41361236
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
41361196 |
ttactttgatattgattaatactttcctttgctccacacat |
41361236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 351 - 387
Target Start/End: Original strand, 48382631 - 48382667
Alignment:
| Q |
351 |
ttgtggtgttgctttacacttagatctaggtctattt |
387 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| |
|
|
| T |
48382631 |
ttgtggtgttgcttcacacttagatctaggtctattt |
48382667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 479
Target Start/End: Complemental strand, 50167062 - 50167022
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
50167062 |
ttactttgatattggttactactttcctttgctccacacat |
50167022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 12900776 - 12900713
Alignment:
| Q |
100 |
atttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca |
163 |
Q |
| |
|
||||| |||||||||||| || |||||||||||||| || || |||||| ||||||||||||| |
|
|
| T |
12900776 |
atttagctcaaccaattacattttgccaagtgtattttctcatgtgctatcttgaatcataaca |
12900713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 441 - 480
Target Start/End: Complemental strand, 13316232 - 13316193
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacatt |
480 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
13316232 |
actttgttattgattactactttcctttgctccacacatt |
13316193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 13400079 - 13399978
Alignment:
| Q |
63 |
aaacttccttgattttaggatcactagtcat---gtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcat |
159 |
Q |
| |
|
||||||||||||||||| | | ||||| ||| || || ||||| ||||| |||||||||||| |||| |||| || || | ||||||||||||||||| |
|
|
| T |
13400079 |
aaacttccttgattttatgtttactagccatatagtatcgatttatctcaaacaattatgttataccaaatgtactttcttaaatgctattttgaatcat |
13399980 |
T |
 |
| Q |
160 |
aa |
161 |
Q |
| |
|
|| |
|
|
| T |
13399979 |
aa |
13399978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 775634 - 775588
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
775634 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtct |
775588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 3157153 - 3157191
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
3157153 |
actttgatattggttactactttcctttgctccacacat |
3157191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 8550664 - 8550626
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
8550664 |
actttgatattggttactactttcctttgctccacacat |
8550626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 13598360 - 13598314
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || |||||||||||| || ||||||||||||||||||| |
|
|
| T |
13598360 |
tgctttgattatgcttgtggtgtttctctacacttagatctaggtct |
13598314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 439 - 493
Target Start/End: Original strand, 15820582 - 15820636
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacatttaagaatattggt |
493 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||| |||| ||||||| |
|
|
| T |
15820582 |
ttactttgatattagttactactttcctttgctccacacatctaagtttattggt |
15820636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 27104507 - 27104553
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
27104507 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtct |
27104553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 447 - 501
Target Start/End: Complemental strand, 44650046 - 44649992
Alignment:
| Q |
447 |
atattgattactacttttctttgctccacacatttaagaatattggtatgatttt |
501 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||| |||| |||||| |||||||| |
|
|
| T |
44650046 |
atattggttactacttttctttgctacacacatctaagtttattggaatgatttt |
44649992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 49138177 - 49138095
Alignment:
| Q |
45 |
cctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgcca |
127 |
Q |
| |
|
|||||||||| |||| |||| ||||||| |||||||||| | ||| | |||| |||| |||| |||||||||||||||||| |
|
|
| T |
49138177 |
cctatttatgtacaatccaagcttcctttattttaggatgaatagctacatgtcaatttgcctcgaccaattatgttatgcca |
49138095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 49918638 - 49918676
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
49918638 |
actttgatattggttactactttcctttgctccacacat |
49918676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 124
Target Start/End: Complemental strand, 4625329 - 4625300
Alignment:
| Q |
95 |
tgtccatttacctcaaccaattatgttatg |
124 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
4625329 |
tgtccatttacctcaaccaattatgttatg |
4625300 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 480
Target Start/End: Complemental strand, 13659233 - 13659192
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacatt |
480 |
Q |
| |
|
|||||||||| ||| |||||||||| |||||||||||||||| |
|
|
| T |
13659233 |
ttactttgatgttggttactactttcctttgctccacacatt |
13659192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 40816867 - 40816924
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
|||||||| || ||| ||||||||||| ||||||||||| ||||||| ||| |||||| |
|
|
| T |
40816867 |
tgctttgattatgctcgtggtgttgctctacacttagatttaggtctgttttttgttg |
40816924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 442 - 479
Target Start/End: Complemental strand, 45644237 - 45644200
Alignment:
| Q |
442 |
ctttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
45644237 |
ctttgatattggttactactttcctttgctccacacat |
45644200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 22)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 516
Target Start/End: Complemental strand, 27305600 - 27305522
Alignment:
| Q |
438 |
gttactttgatattgattactacttttctttgctccacacatttaagaatattggtatgattttgagtccaaatacaca |
516 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||||||| || ||||||| ||||||||||||| ||| |||| |
|
|
| T |
27305600 |
gttactttgatattggttactactttcctttgctccacacatcatagtttattggtgtgattttgagtccgaattcaca |
27305522 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 46506003 - 46505886
Alignment:
| Q |
46 |
ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacct-caaccaattatgttatgccaagtgtatttcctaatat |
144 |
Q |
| |
|
||||||||||||| || || |||||| ||||||||||||| || |||||||||||| | | |||| ||| || ||||||||||||| |||||| | || |
|
|
| T |
46506003 |
ctatttatgcacatcc-aaggttcctttattttaggatcaccagacatgtgtccattcaatttcaactaataatattatgccaagtgtgtttcctcaaat |
46505905 |
T |
 |
| Q |
145 |
gctattttgaatcataaca |
163 |
Q |
| |
|
||||| ||||||||||||| |
|
|
| T |
46505904 |
gctatattgaatcataaca |
46505886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 14594845 - 14594910
Alignment:
| Q |
98 |
ccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca |
163 |
Q |
| |
|
|||||||| |||||||||| |||||| |||||| ||||| | ||||||||||||||||||||||| |
|
|
| T |
14594845 |
ccatttacttcaaccaattctgttatcccaagtctattttttcatatgctattttgaatcataaca |
14594910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 8370612 - 8370658
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8370612 |
tgctttgattatgcttgtggtgttgctctacacttagatctaggtct |
8370658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 27026907 - 27026861
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
27026907 |
tgctttgattatgcttgtggtgttgctctacacttagatctaggtct |
27026861 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 479
Target Start/End: Complemental strand, 22834889 - 22834849
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
22834889 |
ttactttgatattggttactactttcctttgctccacacat |
22834849 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 340 - 383
Target Start/End: Complemental strand, 35925441 - 35925398
Alignment:
| Q |
340 |
tttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
||||| || ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
35925441 |
tttgattatgcttgtggtgttgctctacacttagatctaggtct |
35925398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 439 - 474
Target Start/End: Complemental strand, 44700366 - 44700331
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctcca |
474 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |
|
|
| T |
44700366 |
ttactttgatattggttactacttttctttgctcca |
44700331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 340 - 383
Target Start/End: Complemental strand, 48438173 - 48438130
Alignment:
| Q |
340 |
tttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
||||| || ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
48438173 |
tttgattatgcttgtggtgttgctctacacttagatctaggtct |
48438130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 479
Target Start/End: Complemental strand, 2074966 - 2074924
Alignment:
| Q |
437 |
ggttactttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||| |||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
2074966 |
ggttattttgatattggttactactttcctttgctccacacat |
2074924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 7762554 - 7762592
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
7762554 |
actttgatattggttactactttcctttgctccacacat |
7762592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 9636004 - 9635966
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
9636004 |
actttgatattggttactactttcctttgctccacacat |
9635966 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 26298950 - 26298904
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
26298950 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtct |
26298904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 379
Target Start/End: Complemental strand, 27038252 - 27038210
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctag |
379 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||||||| |
|
|
| T |
27038252 |
tgctttgattatgcttgtggtgttgctctacacttagatctag |
27038210 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 29813349 - 29813387
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
29813349 |
actttgatattagttactacttttctttgctccacacat |
29813387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 40592908 - 40592954
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
40592908 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtct |
40592954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 40734785 - 40734823
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
40734785 |
actttgatattggttactactttcctttgctccacacat |
40734823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Original strand, 40735670 - 40735708
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
40735670 |
actttgatattggttactactttcctttgctccacacat |
40735708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 349 - 383
Target Start/End: Original strand, 47924009 - 47924043
Alignment:
| Q |
349 |
gcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
47924009 |
gcttgtggtgttgctctacacttagatctaggtct |
47924043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 480
Target Start/End: Original strand, 16499300 - 16499341
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacatt |
480 |
Q |
| |
|
|||||||||| ||| |||||||||| |||||||||||||||| |
|
|
| T |
16499300 |
ttactttgatgttggttactactttcctttgctccacacatt |
16499341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 442 - 479
Target Start/End: Complemental strand, 29196269 - 29196232
Alignment:
| Q |
442 |
ctttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
29196269 |
ctttgatattggttactactttcctttgctccacacat |
29196232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 40519156 - 40519107
Alignment:
| Q |
436 |
aggttactttgatattgattactactt-ttctttgctccacacatttaag |
484 |
Q |
| |
|
||||||||||||||||||||| ||||| | ||||||||||||||||||| |
|
|
| T |
40519156 |
aggttactttgatattgattattacttcctttttgctccacacatttaag |
40519107 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 41975 - 41910
Alignment:
| Q |
98 |
ccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca |
163 |
Q |
| |
|
|||||||| |||||||||| |||||| |||||| ||||| | ||||||||||||||||||||||| |
|
|
| T |
41975 |
ccatttacttcaaccaattctgttatcccaagtctattttttcatatgctattttgaatcataaca |
41910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0148 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0148
Description:
Target: scaffold0148; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 394
Target Start/End: Complemental strand, 10691 - 10634
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||| ||||||| ||| |||||| |
|
|
| T |
10691 |
tgctttgattatgcttgtggtgttgctctacacttagatttaggtctgttttttgttg |
10634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0076 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0076
Description:
Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 16124 - 16181
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg |
394 |
Q |
| |
|
||||||||||| | ||||||||||| || |||||||||||||||| ||||||||||| |
|
|
| T |
16124 |
tgctttgaatatgtttgtggtgttgtttcacacttagatctaggtaaatttgttgttg |
16181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1668 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1668
Description:
Target: scaffold1668; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 479
Target Start/End: Complemental strand, 1382 - 1344
Alignment:
| Q |
441 |
actttgatattgattactacttttctttgctccacacat |
479 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
1382 |
actttaatattgattactactttcctttgctccacacat |
1344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 31; Significance: 0.00000006; HSPs: 3)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 2454 - 2408
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || ||||||||||||| | ||||||||||||||||||| |
|
|
| T |
2454 |
tgctttgattatgcttgtggtgttgttctacacttagatctaggtct |
2408 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 5645 - 5599
Alignment:
| Q |
337 |
tgctttgaataagcttgtggtgttgctttacacttagatctaggtct |
383 |
Q |
| |
|
|||||||| || |||||||||||| || ||||||||||||||||||| |
|
|
| T |
5645 |
tgctttgattatgcttgtggtgtttctctacacttagatctaggtct |
5599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 480
Target Start/End: Complemental strand, 148994 - 148953
Alignment:
| Q |
439 |
ttactttgatattgattactacttttctttgctccacacatt |
480 |
Q |
| |
|
|||||||||| ||| |||||||||| |||||||||||||||| |
|
|
| T |
148994 |
ttactttgatgttggttactactttcctttgctccacacatt |
148953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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