View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11279_high_12 (Length: 442)
Name: NF11279_high_12
Description: NF11279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11279_high_12 |
 | |
|
| [»] scaffold0899 (1 HSPs) |
| | |
|
| [»] scaffold1230 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 366; Significance: 0; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 10 - 423
Target Start/End: Complemental strand, 5278665 - 5278252
Alignment:
| Q |
10 |
gaggagcagagatccttatagtactggaaggtactctttatgttggatttgtcacatcaaatcaagacaacaatcgtctctttaccaaggtactcaacaa |
109 |
Q |
| |
|
||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5278665 |
gaggaacagagatccttatagtacttgaaggcactctttatgttggatttgtcacatcaaatcaagacaacaatcgtctctttaccaaggtgctcaacaa |
5278566 |
T |
|
| Q |
110 |
gggtgatgtgtttgtgttcccgatcggtcttattcattttcagctgaatgtgggatatggcaacgctgttgctattgctggacttagcagtcaaaaccca |
209 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
5278565 |
gggtgatgtgtttgtgttcccaattggtcttattcattttcaactgaatgtgggatatggcaacgctgttgctattgctggacttagcagtcaaaatcca |
5278466 |
T |
|
| Q |
210 |
ggagttatcactgttgcaaatgctttgtttaaatctgatcctcttatttccgacgaagttcttaccaaagcttttcaggtggataagagcataattgatt |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
5278465 |
ggagttatcactgttgcaaatgctttgtttaaatcagatcctcttatttccgacgaagttcttaccaaagcttttcaagtggataagagcataattgatt |
5278366 |
T |
|
| Q |
310 |
atcttcaaaaacagtcttggtatgacaacaactagtcggagaacatgatcagtcgactgtttactctaaattgatagttgtctttaggttttgaatcacc |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
5278365 |
atcttcaaaaacagtcttggtatgacaacaactagtcggagaacatgatcagtcgactgtttactctaaattgataggtgtctttaggtttcgaatcacc |
5278266 |
T |
|
| Q |
410 |
ttgtgcaagcaacc |
423 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
5278265 |
ttgtgcaagcaacc |
5278252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 10 - 367
Target Start/End: Complemental strand, 5286646 - 5286289
Alignment:
| Q |
10 |
gaggagcagagatccttatagtactggaaggtactctttatgttggatttgtcacatcaaatcaagacaacaatcgtctctttaccaaggtactcaacaa |
109 |
Q |
| |
|
||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5286646 |
gaggaacagagatccttatagtacttgaaggcactctttatgttggatttgtcacttcaaatcaagacaacaatcgtctctttaccaaggtgctcaacaa |
5286547 |
T |
|
| Q |
110 |
gggtgatgtgtttgtgttcccgatcggtcttattcattttcagctgaatgtgggatatggcaacgctgttgctattgctggacttagcagtcaaaaccca |
209 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
5286546 |
gggtgatgtgtttgtgttcccaattggtcttattcattttcaactgaatgtgggatatggcaacgccgttgctattgctggacttagcagtcaaaatcca |
5286447 |
T |
|
| Q |
210 |
ggagttatcactgttgcaaatgctttgtttaaatctgatcctcttatttccgacgaagttcttaccaaagcttttcaggtggataagagcataattgatt |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
5286446 |
ggagttatcactgttgcaaatgctttgtttaaatcagatcctcttatttccgacgaagttcttaccaaagcttttcaagtggataagagcataattgatt |
5286347 |
T |
|
| Q |
310 |
atcttcaaaaacagtcttggtatgacaacaactagtcggagaacatgatcagtcgact |
367 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||||||||||| ||| |||| |
|
|
| T |
5286346 |
atcttcaaaagcagtcttggtatgacaacaactagtttgagaacatgattagttgact |
5286289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 10 - 357
Target Start/End: Original strand, 5282431 - 5282778
Alignment:
| Q |
10 |
gaggagcagagatccttatagtactggaaggtactctttatgttggatttgtcacatcaaatcaagacaacaatcgtctctttaccaaggtactcaacaa |
109 |
Q |
| |
|
||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| || |||||||| |
|
|
| T |
5282431 |
gaggaacagagatccttatagtactcgaaggcactctttatgttggatttgtcacgtccaatcaagacaacaatcgtctcttcaccaaagtgctcaacaa |
5282530 |
T |
|
| Q |
110 |
gggtgatgtgtttgtgttcccgatcggtcttattcattttcagctgaatgtgggatatggcaacgctgttgctattgctggacttagcagtcaaaaccca |
209 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5282531 |
gggtgatgtgtttgtgttcccgattggtcttattcattttcagctgaatgtgggatatggcaacgctgttgctattgctggacttagcagtcaaaaccca |
5282630 |
T |
|
| Q |
210 |
ggagttatcactgttgcaaatgctttgtttaaatctgatcctcttatttccgacgaagttcttaccaaagcttttcaggtggataagagcataattgatt |
309 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
5282631 |
ggagttatcactgtagcaaatgctttgtttaaatcgaatccgcttatttccgacgaagttcttaccaaagcatttcaagtggataagagcataattgatt |
5282730 |
T |
|
| Q |
310 |
atcttcaaaaacagtcttggtatgacaacaactagtcggagaacatga |
357 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
5282731 |
atcttcaaaagcagtcttggtacgacaacaactagttggagaacatga |
5282778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 290; Significance: 1e-162; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 10 - 423
Target Start/End: Original strand, 20353823 - 20354236
Alignment:
| Q |
10 |
gaggagcagagatccttatagtactggaaggtactctttatgttggatttgtcacatcaaatcaagacaacaatcgtctctttaccaaggtactcaacaa |
109 |
Q |
| |
|
||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| || |||||||| |
|
|
| T |
20353823 |
gaggaacagagatccttatagtactcgaaggcactctttatgttggatttgtcacgtccaatcaagacaacaatcgtctcttcaccaaagtgctcaacaa |
20353922 |
T |
|
| Q |
110 |
gggtgatgtgtttgtgttcccgatcggtcttattcattttcagctgaatgtgggatatggcaacgctgttgctattgctggacttagcagtcaaaaccca |
209 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
20353923 |
gggtgatgtgtttgtgttcccaattggtcttattcattttcaactgaatgtgggatatggcaacgctgttgctattgctggacttagcagtcaaaatcca |
20354022 |
T |
|
| Q |
210 |
ggagttatcactgttgcaaatgctttgtttaaatctgatcctcttatttccgacgaagttcttaccaaagcttttcaggtggataagagcataattgatt |
309 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
20354023 |
ggagtaatcactgttgcaaacgctttgtttaaatctgatcctcttatttccgacgaagttcttaccaaagcttttcaagtggataagagcataattgatt |
20354122 |
T |
|
| Q |
310 |
atcttcaaaaacagtcttggtatgacaacaactagtcggagaacatgatcagtcgactgtttactctaaattgatagttgtctttaggttttgaatcacc |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||| | || | ||||||||| ||| |||| ||| ||| | | || ||||||| |
|
|
| T |
20354123 |
atcttcaaaaacagtcttggtatgacaacaactagttggagaacatgattattccatggtttactctgaatggataattgaatttcgttcttcaatcacc |
20354222 |
T |
|
| Q |
410 |
ttgtgcaagcaacc |
423 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
20354223 |
ttgtgcaatcaacc |
20354236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 10 - 367
Target Start/End: Complemental strand, 20358032 - 20357675
Alignment:
| Q |
10 |
gaggagcagagatccttatagtactggaaggtactctttatgttggatttgtcacatcaaatcaagacaacaatcgtctctttaccaaggtactcaacaa |
109 |
Q |
| |
|
||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
20358032 |
gaggaacagagatccttatagtacttgaaggcactctttatgttggatttgtcacttcaaatcaagacaacaatcgtctctttaccaaagtgctcaacaa |
20357933 |
T |
|
| Q |
110 |
gggtgatgtgtttgtgttcccgatcggtcttattcattttcagctgaatgtgggatatggcaacgctgttgctattgctggacttagcagtcaaaaccca |
209 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |
|
|
| T |
20357932 |
gggtgatgtgtttgtgttcccaattggtcttattcattttcaactgaatgtgggatatggcaatgccgttgctattgctggacttagcagtcaaaatcca |
20357833 |
T |
|
| Q |
210 |
ggagttatcactgttgcaaatgctttgtttaaatctgatcctcttatttccgacgaagttcttaccaaagcttttcaggtggataagagcataattgatt |
309 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
20357832 |
ggagttatcaccgttgcaaatgctttgtttaaatcagatcctcttatttccgacgaagttcttaccaaagcttttcaagtggataagagcataattgatt |
20357733 |
T |
|
| Q |
310 |
atcttcaaaaacagtcttggtatgacaacaactagtcggagaacatgatcagtcgact |
367 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||||||||||| ||| |||| |
|
|
| T |
20357732 |
atcttcaaaagcagtcttggtatgacaacaactagttagagaacatgattagttgact |
20357675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 16 - 358
Target Start/End: Complemental strand, 6235612 - 6235270
Alignment:
| Q |
16 |
cagagatccttatagtactggaaggtactctttatgttggatttgtcacatcaaatcaagacaacaatcgtctctttaccaaggtactcaacaagggtga |
115 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| || || ||||||||||| |
|
|
| T |
6235612 |
cagagatccttatagtactcgaaggcactctttatgttggatttgtcacgtccaatcaagacaacaatcgtctcttcaccaaagtgctaaacaagggtga |
6235513 |
T |
|
| Q |
116 |
tgtgtttgtgttcccgatcggtcttattcattttcagctgaatgtgggatatggcaacgctgttgctattgctggacttagcagtcaaaacccaggagtt |
215 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6235512 |
tgtgtttgtgttcccaattggtcttattcattttcaactaaatgtgggatatggcaacgctgttgctattgctggacttagcagtcaaaacccaggagtt |
6235413 |
T |
|
| Q |
216 |
atcactgttgcaaatgctttgtttaaatctgatcctcttatttccgacgaagttcttaccaaagcttttcaggtggataagagcataattgattatcttc |
315 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
6235412 |
atcaccgttgcaaatgctttgtttaaatctaatccgcttatttccgacgaagttcttaccaaagcttttcaagtggataagagcataattgattatcttc |
6235313 |
T |
|
| Q |
316 |
aaaaacagtcttggtatgacaacaactagtcggagaacatgat |
358 |
Q |
| |
|
|||| ||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
6235312 |
aaaagcagtcttggtatgacaacaactagttgaagaacatgat |
6235270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0899 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0899
Description:
Target: scaffold0899; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 224 - 345
Target Start/End: Original strand, 3145 - 3265
Alignment:
| Q |
224 |
tgcaaatgctttgtttaaatctgatcctcttatttccgacgaagttcttaccaaagcttttcaggtggataagagcataattgattatcttcaaaaacag |
323 |
Q |
| |
|
|||||||||||| |||||||| |||| | |||||| || ||||||||||||||||||||| ||| || ||||||||||||||||||||| ||| ||| |
|
|
| T |
3145 |
tgcaaatgcttttcttaaatctaatccgcctatttctgaaaaagttcttaccaaagcttttcgagtgcattagagcataattgattatcttc-aaagcag |
3243 |
T |
|
| Q |
324 |
tcttggtatgacaacaactagt |
345 |
Q |
| |
|
|||||||||||||| ||||||| |
|
|
| T |
3244 |
tcttggtatgacaataactagt |
3265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 84 - 233
Target Start/End: Complemental strand, 702528 - 702379
Alignment:
| Q |
84 |
cgtctctttaccaaggtactcaacaagggtgatgtgtttgtgttcccgatcggtcttattcattttcagctgaatgtgggatatggcaacgctgttgcta |
183 |
Q |
| |
|
|||||| |||| || ||||| ||||| || |||||||||||||| || || ||||| ||||| || || |||||||||||||||| || || ||||||| |
|
|
| T |
702528 |
cgtctcattacaaaagtactgaacaaaggagatgtgtttgtgtttccaattggtctcattcacttccaattgaatgtgggatatggaaatgcagttgcta |
702429 |
T |
|
| Q |
184 |
ttgctggacttagcagtcaaaacccaggagttatcactgttgcaaatgct |
233 |
Q |
| |
|
|||||||||||||||| ||||| ||||| || ||||| |||| |||||| |
|
|
| T |
702428 |
ttgctggacttagcagccaaaatccaggtgtaatcacaattgctaatgct |
702379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 710860 - 710676
Alignment:
| Q |
18 |
gagatccttatagtactggaaggtactctttatgttggatttgtcacatcaaatcaagacaacaatcgtctctttaccaaggtactcaacaagggtgatg |
117 |
Q |
| |
|
||||| |||||||| |||| |||||||| ||||| || ||||| || || |||| ||| ||| |||||| | || || ||||| ||||| || |||| |
|
|
| T |
710860 |
gagattcttatagtgttggagggtactctctatgtcgggtttgttacttctaatccagaaaac---cgtctcatcacaaaagtactgaacaaaggagatg |
710764 |
T |
|
| Q |
118 |
tgtttgtgttcccgatcggtcttattcattttcagctgaatgtgggatatggcaacgctgttgctattgctggacttagcagtcaaaa |
205 |
Q |
| |
|
|||||||||| || || ||||| ||||| || || |||||||||||||||| || || ||||||||||||||||||||||| ||||| |
|
|
| T |
710763 |
tgtttgtgtttccaattggtctcattcacttccaattgaatgtgggatatggaaatgcagttgctattgctggacttagcagccaaaa |
710676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 205
Target Start/End: Complemental strand, 717815 - 717709
Alignment:
| Q |
99 |
gtactcaacaagggtgatgtgtttgtgttcccgatcggtcttattcattttcagctgaatgtgggatatggcaacgctgttgctattgctggacttagca |
198 |
Q |
| |
|
||||| ||||| || |||||||||||||| || || ||||| ||||| || || |||||||||||||||| || || |||||||||||||||||||||| |
|
|
| T |
717815 |
gtactaaacaaaggagatgtgtttgtgtttccaattggtctcattcacttccaattgaatgtgggatatggaaatgcagttgctattgctggacttagca |
717716 |
T |
|
| Q |
199 |
gtcaaaa |
205 |
Q |
| |
|
| ||||| |
|
|
| T |
717715 |
gccaaaa |
717709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 712847 - 713031
Alignment:
| Q |
18 |
gagatccttatagtactggaaggtactctttatgttggatttgtcacatcaaatcaagacaacaatcgtctctttaccaaggtactcaacaagggtgatg |
117 |
Q |
| |
|
||||| |||||||| |||| |||||||| ||||| || ||||| || || |||| ||| ||| |||||| |||| || ||||| ||||| || |||| |
|
|
| T |
712847 |
gagattcttatagtgttggagggtactctctatgtcgggtttgttacttctaatccagaaaac---cgtctcattacaaaagtactgaacaaaggagatg |
712943 |
T |
|
| Q |
118 |
tgtttgtgttcccgatcggtcttattcattttcagctgaatgtgggatatggcaacgctgttgctattgctggacttagcagtcaaaa |
205 |
Q |
| |
|
|||||||||| || || || || ||||| ||||| ||||||| || ||||| || || ||||||||||||||||||||||| ||||| |
|
|
| T |
712944 |
tgtttgtgtttccaattggcctcattcactttcaattgaatgttgggtatggaaatgcagttgctattgctggacttagcagccaaaa |
713031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 14437443 - 14437512
Alignment:
| Q |
217 |
tcactgttgcaaatgctttgtttaaatctgatcctcttatttccgacgaagttcttaccaaagcttttca |
286 |
Q |
| |
|
||||| ||||||||||||||||||||||| || | | |||||| || |||||||||| || |||||||| |
|
|
| T |
14437443 |
tcactattgcaaatgctttgtttaaatctaatacacctatttctgaaaaagttcttacgaatgcttttca |
14437512 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 239
Target Start/End: Original strand, 35313548 - 35313753
Alignment:
| Q |
34 |
tggaaggtactctttatgttggatttgtcacatcaaatcaagacaacaatcgtctctttaccaaggtactcaacaagggtgatgtgtttgtgttcccgat |
133 |
Q |
| |
|
||||||| || ||||| ||||||||||| | |||||||||||||| || |||||||| ||||| ||| | ||||| |||||||| |||||||| || || |
|
|
| T |
35313548 |
tggaaggcacactttacgttggatttgtttcctcaaatcaagacaataaccgtctcttcaccaaagtattgaacaaaggtgatgtatttgtgtttccaat |
35313647 |
T |
|
| Q |
134 |
cggtcttattcattttcagctgaatgtgggatatggcaacgctgttgctattgctggacttagcagtcaaaacccaggagttatcactgttgcaaatgct |
233 |
Q |
| |
|
|||||| ||||| || || |||| || || ||||| | ||| |||| |||||||| ||||| || |||||||| ||||| || || ||||||||||| |
|
|
| T |
35313648 |
cggtctcattcacttccaattgaacgttggttatggggaggctattgccattgctggtcttagtagccaaaaccctggagtgattaccattgcaaatgct |
35313747 |
T |
|
| Q |
234 |
ttgttt |
239 |
Q |
| |
|
||||| |
|
|
| T |
35313748 |
gtgttt |
35313753 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1230 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1230
Description:
Target: scaffold1230; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 342
Target Start/End: Complemental strand, 1259 - 1140
Alignment:
| Q |
223 |
ttgcaaatgctttgtttaaatctgatcctcttatttccgacgaagttcttaccaaagcttttcaggtggataagagcataattgattatcttcaaaaaca |
322 |
Q |
| |
|
||||||||||||||||||||||| || | ||||| | ||||||||| ||||| ||||| || || | |||||||||||||||||| |||| || |
|
|
| T |
1259 |
ttgcaaatgctttgtttaaatctacgccgcctatttttcagaaagttcttagcaaagtttttcgagtagactaaagcataattgattatctttaaaagca |
1160 |
T |
|
| Q |
323 |
gtcttggtatgacaacaact |
342 |
Q |
| |
|
|||||| |||||||| |||| |
|
|
| T |
1159 |
gtcttgatatgacaataact |
1140 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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