View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11279_high_27 (Length: 303)

Name: NF11279_high_27
Description: NF11279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11279_high_27
NF11279_high_27
[»] chr2 (36 HSPs)
chr2 (1-217)||(31237890-31238107)
chr2 (1-217)||(1404782-1404998)
chr2 (1-217)||(36429847-36430063)
chr2 (2-214)||(31578007-31578217)
chr2 (1-215)||(35565871-35566082)
chr2 (42-217)||(30432418-30432593)
chr2 (1-217)||(15588768-15588979)
chr2 (1-107)||(1690642-1690748)
chr2 (34-217)||(20063713-20063896)
chr2 (87-217)||(23863321-23863451)
chr2 (121-218)||(1690796-1690893)
chr2 (90-216)||(19491855-19491982)
chr2 (1-68)||(19492079-19492148)
chr2 (83-214)||(25539222-25539353)
chr2 (13-56)||(19262242-19262285)
chr2 (1-79)||(25539059-25539138)
chr2 (1-79)||(34841717-34841796)
chr2 (111-217)||(15266081-15266187)
chr2 (13-79)||(16766922-16766989)
chr2 (1-67)||(31023450-31023517)
chr2 (26-72)||(41002156-41002202)
chr2 (34-74)||(974467-974507)
chr2 (1-68)||(8428369-8428437)
chr2 (78-118)||(13502561-13502601)
chr2 (1-52)||(13502587-13502639)
chr2 (173-217)||(19245152-19245196)
chr2 (78-117)||(27406993-27407032)
chr2 (121-180)||(31023259-31023318)
chr2 (121-219)||(5395682-5395780)
chr2 (122-216)||(16766710-16766804)
chr2 (1-74)||(21869248-21869321)
chr2 (34-72)||(26251658-26251696)
chr2 (11-71)||(5395446-5395507)
chr2 (156-217)||(15627654-15627715)
chr2 (171-216)||(29660893-29660938)
chr2 (78-118)||(35565845-35565885)
[»] chr8 (32 HSPs)
chr8 (1-217)||(11879599-11879815)
chr8 (1-217)||(11897015-11897231)
chr8 (2-219)||(5922046-5922263)
chr8 (1-214)||(15294672-15294884)
chr8 (1-214)||(15475041-15475253)
chr8 (19-217)||(31424162-31424360)
chr8 (1-216)||(45403029-45403245)
chr8 (1-151)||(23142240-23142389)
chr8 (19-212)||(3094175-3094378)
chr8 (1-177)||(6810861-6811035)
chr8 (19-215)||(29384249-29384444)
chr8 (1-214)||(19704371-19704583)
chr8 (1-219)||(27836378-27836596)
chr8 (31-217)||(22910146-22910332)
chr8 (1-217)||(7489197-7489414)
chr8 (1-216)||(17646993-17647212)
chr8 (37-148)||(32424400-32424511)
chr8 (34-128)||(9212202-9212296)
chr8 (27-212)||(6292282-6292467)
chr8 (141-217)||(477101-477177)
chr8 (121-221)||(15761473-15761573)
chr8 (113-217)||(24056594-24056698)
chr8 (1-79)||(15761272-15761353)
chr8 (172-219)||(23136346-23136393)
chr8 (175-219)||(27672303-27672347)
chr8 (78-118)||(29384200-29384240)
chr8 (155-217)||(17788374-17788436)
chr8 (34-72)||(40541781-40541819)
chr8 (1-48)||(8582210-8582258)
chr8 (34-70)||(16752156-16752192)
chr8 (84-116)||(26879778-26879810)
chr8 (84-116)||(30240264-30240296)
[»] chr6 (33 HSPs)
chr6 (1-216)||(26053210-26053425)
chr6 (1-216)||(26073263-26073478)
chr6 (1-217)||(23897810-23898026)
chr6 (1-220)||(19748329-19748548)
chr6 (28-216)||(15528051-15528239)
chr6 (19-217)||(17543672-17543870)
chr6 (12-217)||(30912337-30912542)
chr6 (1-216)||(17250057-17250271)
chr6 (2-217)||(7223518-7223729)
chr6 (1-217)||(17103201-17103410)
chr6 (28-219)||(21354745-21354928)
chr6 (44-216)||(7918338-7918510)
chr6 (78-217)||(27233268-27233407)
chr6 (1-219)||(10508931-10509155)
chr6 (34-217)||(11327518-11327701)
chr6 (45-208)||(22498843-22499006)
chr6 (91-217)||(6943464-6943590)
chr6 (57-213)||(2912218-2912373)
chr6 (1-82)||(7918264-7918343)
chr6 (124-219)||(18491074-18491169)
chr6 (137-219)||(5422798-5422880)
chr6 (1-59)||(27233213-27233271)
chr6 (39-94)||(27614594-27614651)
chr6 (139-214)||(3573984-3574059)
chr6 (23-72)||(645417-645466)
chr6 (11-71)||(5422583-5422644)
chr6 (124-189)||(18490998-18491063)
chr6 (9-70)||(27890519-27890581)
chr6 (78-118)||(10508905-10508945)
chr6 (78-118)||(23898012-23898052)
chr6 (166-219)||(10958266-10958319)
chr6 (1-68)||(20400000-20400068)
chr6 (1-68)||(20432520-20432587)
[»] chr4 (37 HSPs)
chr4 (1-216)||(9770112-9770327)
chr4 (29-217)||(5361905-5362093)
chr4 (1-219)||(8889225-8889441)
chr4 (1-216)||(9911325-9911541)
chr4 (19-217)||(13023566-13023767)
chr4 (11-217)||(23064885-23065093)
chr4 (1-217)||(36120823-36121038)
chr4 (19-217)||(10142898-10143096)
chr4 (1-215)||(17466080-17466294)
chr4 (1-214)||(5375666-5375880)
chr4 (18-217)||(37240261-37240455)
chr4 (63-217)||(13551598-13551752)
chr4 (83-216)||(8011212-8011345)
chr4 (122-215)||(7044728-7044821)
chr4 (123-217)||(24719516-24719610)
chr4 (112-217)||(18459733-18459838)
chr4 (122-216)||(4156763-4156857)
chr4 (112-212)||(7815561-7815661)
chr4 (1-79)||(8011050-8011129)
chr4 (112-217)||(7452419-7452523)
chr4 (11-72)||(9149647-9149709)
chr4 (137-217)||(6347114-6347194)
chr4 (1-68)||(24719722-24719790)
chr4 (26-72)||(5846058-5846104)
chr4 (26-79)||(7825186-7825239)
chr4 (1-72)||(6346869-6346941)
chr4 (78-118)||(7044964-7045004)
chr4 (1-79)||(7044899-7044978)
chr4 (1-79)||(7045078-7045157)
chr4 (165-216)||(9149813-9149864)
chr4 (183-217)||(610686-610720)
chr4 (26-72)||(8409725-8409771)
chr4 (34-72)||(18403672-18403710)
chr4 (26-72)||(55476119-55476165)
chr4 (81-118)||(4157053-4157090)
chr4 (43-79)||(7815783-7815819)
chr4 (78-118)||(10143101-10143141)
[»] chr1 (32 HSPs)
chr1 (1-220)||(9351977-9352196)
chr1 (1-216)||(13276180-13276395)
chr1 (1-216)||(23528656-23528871)
chr1 (1-217)||(18304725-18304941)
chr1 (1-219)||(13100188-13100405)
chr1 (1-215)||(42179978-42180193)
chr1 (19-217)||(9954967-9955165)
chr1 (1-217)||(9327128-9327345)
chr1 (1-217)||(25146683-25146898)
chr1 (1-214)||(12513283-12513493)
chr1 (1-209)||(16125369-16125580)
chr1 (1-217)||(21846188-21846398)
chr1 (39-214)||(19009898-19010073)
chr1 (1-215)||(17869664-17869873)
chr1 (23-216)||(9128776-9128969)
chr1 (1-117)||(47785958-47786073)
chr1 (36-139)||(18228278-18228380)
chr1 (29-128)||(32881415-32881514)
chr1 (78-217)||(41032661-41032800)
chr1 (83-217)||(17055995-17056129)
chr1 (141-216)||(30619075-30619150)
chr1 (121-216)||(14074404-14074499)
chr1 (112-217)||(18337547-18337651)
chr1 (155-217)||(34478838-34478900)
chr1 (26-74)||(12002811-12002859)
chr1 (128-216)||(12800622-12800710)
chr1 (1-79)||(27917286-27917363)
chr1 (27-78)||(16446699-16446750)
chr1 (155-213)||(27917520-27917578)
chr1 (172-217)||(47785791-47785836)
chr1 (165-213)||(12003241-12003289)
chr1 (78-118)||(13100391-13100431)
[»] chr7 (41 HSPs)
chr7 (13-216)||(44944771-44944978)
chr7 (1-215)||(5058530-5058744)
chr7 (1-217)||(24725386-24725607)
chr7 (1-216)||(4247356-4247571)
chr7 (2-214)||(8346446-8346660)
chr7 (28-216)||(24990012-24990200)
chr7 (27-217)||(14055250-14055440)
chr7 (27-217)||(14365278-14365468)
chr7 (19-219)||(8343731-8343932)
chr7 (32-217)||(27221417-27221602)
chr7 (1-210)||(20570799-20571002)
chr7 (1-217)||(8329958-8330175)
chr7 (1-178)||(17811385-17811563)
chr7 (33-219)||(26281256-26281441)
chr7 (1-216)||(5715290-5715500)
chr7 (1-207)||(11324988-11325194)
chr7 (63-217)||(7730319-7730472)
chr7 (63-217)||(9685220-9685374)
chr7 (54-216)||(22687631-22687793)
chr7 (1-216)||(6916786-6916994)
chr7 (92-209)||(8571250-8571367)
chr7 (78-216)||(11326386-11326524)
chr7 (78-217)||(39182259-39182397)
chr7 (1-219)||(26617391-26617608)
chr7 (58-196)||(27509914-27510052)
chr7 (98-216)||(21846437-21846554)
chr7 (137-216)||(30294175-30294251)
chr7 (78-151)||(1977717-1977790)
chr7 (1-74)||(21846361-21846433)
chr7 (78-118)||(21846335-21846375)
chr7 (11-55)||(27509336-27509379)
chr7 (26-72)||(1981275-1981321)
chr7 (78-118)||(7730247-7730287)
chr7 (26-78)||(17809067-17809119)
chr7 (28-72)||(21157625-21157669)
chr7 (36-79)||(26565497-26565540)
chr7 (84-118)||(21157522-21157556)
chr7 (34-72)||(25842691-25842729)
chr7 (78-118)||(4247557-4247597)
chr7 (155-207)||(17809441-17809493)
chr7 (78-118)||(26565436-26565476)
[»] chr5 (22 HSPs)
chr5 (1-216)||(43234868-43235083)
chr5 (1-217)||(18051447-18051660)
chr5 (1-215)||(18843716-18843930)
chr5 (1-217)||(19578941-19579158)
chr5 (1-219)||(21059071-21059287)
chr5 (1-215)||(23172342-23172560)
chr5 (1-218)||(22645635-22645850)
chr5 (1-205)||(41688580-41688782)
chr5 (23-208)||(27340126-27340307)
chr5 (1-216)||(38158178-38158383)
chr5 (23-151)||(19979664-19979792)
chr5 (1-167)||(20320992-20321158)
chr5 (91-216)||(20923718-20923843)
chr5 (5-72)||(26021464-26021532)
chr5 (142-214)||(19042444-19042516)
chr5 (1-117)||(19042341-19042448)
chr5 (1-72)||(24648160-24648232)
chr5 (34-74)||(19377742-19377782)
chr5 (1-68)||(43005773-43005841)
chr5 (26-72)||(22984753-22984799)
chr5 (80-118)||(38158154-38158192)
chr5 (34-74)||(41427548-41427588)
[»] scaffold0186 (1 HSPs)
scaffold0186 (1-217)||(8442-8656)
[»] chr3 (49 HSPs)
chr3 (50-218)||(29067282-29067450)
chr3 (11-218)||(8156052-8156262)
chr3 (1-213)||(39427905-39428118)
chr3 (1-217)||(28745769-28745991)
chr3 (63-216)||(20756039-20756192)
chr3 (19-217)||(24620132-24620333)
chr3 (1-143)||(42696920-42697063)
chr3 (54-211)||(17064326-17064483)
chr3 (1-207)||(21963438-21963646)
chr3 (1-207)||(21985874-21986082)
chr3 (1-216)||(22137278-22137492)
chr3 (60-215)||(3449265-3449419)
chr3 (1-218)||(22355976-22356184)
chr3 (30-198)||(22494731-22494892)
chr3 (1-96)||(15515172-15515265)
chr3 (83-216)||(24649684-24649818)
chr3 (90-216)||(30727694-30727820)
chr3 (112-217)||(27676355-27676460)
chr3 (70-222)||(25870350-25870511)
chr3 (1-59)||(25870236-25870294)
chr3 (124-217)||(15806543-15806635)
chr3 (120-217)||(17796267-17796364)
chr3 (120-217)||(17796376-17796473)
chr3 (120-217)||(19104707-19104804)
chr3 (120-217)||(19104816-19104913)
chr3 (112-206)||(10872971-10873065)
chr3 (137-215)||(28135723-28135801)
chr3 (1-88)||(9152898-9152984)
chr3 (1-52)||(20756186-20756237)
chr3 (120-217)||(17796485-17796582)
chr3 (120-217)||(19104925-19105022)
chr3 (78-118)||(6136457-6136497)
chr3 (34-74)||(8592359-8592399)
chr3 (1-72)||(27676579-27676651)
chr3 (1-70)||(6861053-6861123)
chr3 (34-72)||(19348684-19348722)
chr3 (1-42)||(17064481-17064522)
chr3 (78-118)||(3449198-3449238)
chr3 (34-70)||(9169806-9169842)
chr3 (78-118)||(10872603-10872643)
chr3 (78-118)||(13286145-13286185)
chr3 (79-115)||(17796771-17796807)
chr3 (79-115)||(19105211-19105247)
chr3 (78-118)||(21963632-21963672)
chr3 (78-118)||(21986068-21986108)
chr3 (78-118)||(22137478-22137518)
chr3 (10-70)||(27055255-27055315)
chr3 (78-118)||(27676637-27676677)
chr3 (172-212)||(42696870-42696910)
[»] scaffold0417 (1 HSPs)
scaffold0417 (1-219)||(7369-7587)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-217)||(93619-93834)
scaffold0042 (78-118)||(93593-93633)
[»] scaffold0510 (1 HSPs)
scaffold0510 (78-217)||(91-231)
[»] scaffold0016 (1 HSPs)
scaffold0016 (41-95)||(58736-58790)
[»] scaffold0603 (2 HSPs)
scaffold0603 (1-79)||(8873-8952)
scaffold0603 (121-217)||(9054-9150)
[»] scaffold0048 (1 HSPs)
scaffold0048 (124-217)||(48825-48918)
[»] scaffold0036 (1 HSPs)
scaffold0036 (112-217)||(37191-37296)
[»] scaffold0017 (1 HSPs)
scaffold0017 (34-74)||(38491-38531)
[»] scaffold0061 (1 HSPs)
scaffold0061 (34-69)||(76273-76308)
[»] scaffold1178 (1 HSPs)
scaffold1178 (26-72)||(466-512)
[»] scaffold0526 (1 HSPs)
scaffold0526 (27-72)||(8288-8332)
[»] scaffold0115 (1 HSPs)
scaffold0115 (131-216)||(35103-35188)
[»] scaffold0027 (1 HSPs)
scaffold0027 (34-71)||(133075-133112)
[»] scaffold0684 (1 HSPs)
scaffold0684 (26-70)||(5164-5208)
[»] scaffold0001 (1 HSPs)
scaffold0001 (26-70)||(142764-142808)


Alignment Details
Target: chr2 (Bit Score: 150; Significance: 3e-79; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 31237890 - 31238107
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatac-taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctca 99  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  31237890 aaatcgatggattttaccaaaaaataataatacatgaatatatgttataaatggtatataatcataaatgacttagtttataagaaatcgtaaaatcgca 31237989  T
Q  100 atcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtc 199  Q
    |||||||| ||||||||||| |||||||| |||||||||||| |||||||||   |||||||||||||||  ||||||||| |||||||| |||||||||    
T  31237990 atcaaaatcgatggatttttcctattttaagattctactatgaatttgagtcgttgaaggtgaagaaagtggcaaaatcctagattttaggatttaagtc 31238089  T
Q  200 gggattttgacaacaatg 217  Q
    ||||||||||||||||||    
T  31238090 gggattttgacaacaatg 31238107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 1404998 - 1404782
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||| |  ||| ||||||| | |||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||    
T  1404998 aaatcgatggatttaaaaaaataataatattcctaagtatatgttataaatggtgtatagtcataaatgacttagtatataagaaatcgtaaaatcacaa 1404899  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| ||||||||||   || ||||||||||||| |||||||| ||||   ||||||||||||||||||||||||||  ||||||| ||||||||||    
T  1404898 tcaaaatcgatggattttgcatagtttaggattctacaatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctaaattttagaatttaagtcg 1404799  T
Q  201 ggattttgacaacaatg 217  Q
    |||||||||||||||||    
T  1404798 ggattttgacaacaatg 1404782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 36430063 - 36429847
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||| ||||| || |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||| |||    
T  36430063 aaatcgatggattttacctaaaaaaaaaaatactaaatatatgttagaaatgatatatagtcataaattacttagtttataagaaatcgtacaatcgcaa 36429964  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| ||||||||||  |||||||  |||||| ||||| | |||||||   |||||||||||||||| ||||||||| |||| ||| |||||||| |    
T  36429963 tcaaaatcgatggattttgcctattttgagattctcctatgaacttgagtcgttgaaggtgaagaaagtcgcaaaatcctagattataggatttaagttg 36429864  T
Q  201 ggattttgacaacaatg 217  Q
    |||||||||||||||||    
T  36429863 ggattttgacaacaatg 36429847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 31578217 - 31578007
Alignment:
Q  2 aatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaat 101  Q
    |||||||| |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||    
T  31578217 aatcgatggattttaaccaaaaa-aataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataataaatcgtaaaattgcaat 31578119  T
Q  102 caaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgg 201  Q
    |||||||||||||||||   |||||||||||||||||| |||||| | ||   ||||||||||||| || ||||||| |  ||||||  |||||||||||    
T  31578118 caaaattgatggattttgcttattttaggattctacta-ggatttaaatcgttgaaggtgaagaaaatcgcaaaatcttaaattttaacatttaagtcgg 31578020  T
Q  202 gattttgacaaca 214  Q
    |||||||||||||    
T  31578019 gattttgacaaca 31578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 35565871 - 35566082
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||   |||    
T  35565871 aaatcgatggattttaccaaaaaaaaata---ctaaatatatgttataaattgtatatagtcataaatgactttgtttataagaaatcgtaaaactgcaa 35565967  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| ||||||||||  ||||||| ||||||||| ||||||||||||||  |||  ||||||||||| |||||||||| |||||   |||||||| |    
T  35565968 tcaaaatcgatggattttgcctattttgggattctaccatggatttgagtcattgaatatgaagaaagtcgcaaaatcctgaattttgtgatttaagttg 35566067  T
Q  201 ggattttgacaacaa 215  Q
    |||||||||||||||    
T  35566068 ggattttgacaacaa 35566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 42 - 217
Target Start/End: Complemental strand, 30432593 - 30432418
Alignment:
Q  42 tgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatg 141  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||| |||||||||| ||||||||  ||||||||||||    
T  30432593 tgttataaatggtatatagtaataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctattttgagattctactatg 30432494  T
Q  142 gatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    ||||||||||   ||||| ||||||||||  |||||||| |||||||| |||||| || |||||||||||||||||    
T  30432493 gatttgagtcgttgaaggcgaagaaagtcgaaaaatcctagattttagaatttaaatcaggattttgacaacaatg 30432418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 15588768 - 15588979
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| ||||||||||||||  |||||||||||||||||  |||||||||||||| ||||||||||||||||||||| |||||||||||||| |||    
T  15588768 aaatcgatggattttaccaaaaaa--ataatactaaatatatg--ataaatggtatataatcataaatgacttagtttatatgaaatcgtaaaatcgcaa 15588863  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    | ||||  ||| |||||| ||||||||  |||||||||||| ||||||||    |||||||||||||| | |||||||||| ||||||  | ||||||||    
T  15588864 taaaaaacgattgattttgtctattttgagattctactatgtatttgagttgttgaaggtgaagaaagacgcaaaatcctgaattttaaga-ttaagtcg 15588962  T
Q  201 ggattttgacaacaatg 217  Q
    ||||||||||| |||||    
T  15588963 ggattttgacagcaatg 15588979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 1690642 - 1690748
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  1690642 aaatcgataaattttaccaaaaaataataatattaaatatattttataaatggtatatagtcataaaagacttagtttataagaaatcgtaaaatcgcaa 1690741  T
Q  101 tcaaaat 107  Q
    |||||||    
T  1690742 tcaaaat 1690748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 34 - 217
Target Start/End: Complemental strand, 20063896 - 20063713
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggatt 133  Q
    |||||| |||| |||||||||||| |||||||||||| |||||| |||||||| ||||||||| |||| ||||| |||| |||||  ||||||| |||||    
T  20063896 taaatacatgtgataaatggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggatt 20063797  T
Q  134 ctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    ||||||||||||| ||||   |||| ||||||||  | ||||| | ||||||||||  ||||||||||||||||||||||||||    
T  20063796 ctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaatg 20063713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 23863321 - 23863451
Alignment:
Q  87 tcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattt 186  Q
    |||||||||| ||| |||||| ||||||||||  |||||||  ||||||||||||||||| ||||   ||| |||||||||||| |||||| || |||||    
T  23863321 tcgtaaaatcgcaaccaaaatcgatggattttgcctattttgagattctactatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgattt 23863420  T
Q  187 tagtatttaagtcgggattttgacaacaatg 217  Q
    ||| |||||||||||||||||||||||||||    
T  23863421 tagaatttaagtcgggattttgacaacaatg 23863451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 1690796 - 1690893
Alignment:
Q  121 ctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatgg 218  Q
    ||||||| ||||| |||||||||| ||||||   ||||||||||||||||||||||||||  ||||||  |||||||||||  |||||||||||||||    
T  1690796 ctattttgggattttactatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttgacaacaatgg 1690893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 19491982 - 19491855
Alignment:
Q  90 taaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattt--t 187  Q
    ||||||| |||||||||| ||||||||||  ||||||| ||||||| |||||||||||||||    ||| ||||||||||| ||||||||| |||||  |    
T  19491982 taaaatcgcaatcaaaatcgatggattttacctatttt-ggattctgctatggatttgagtcgtttaagatgaagaaagtcgcaaaatcctagattttat 19491884  T
Q  188 agtatttaagtcgggattttgacaacaat 216  Q
    || |||||| ||| |||||||||||||||    
T  19491883 aggatttaattcgagattttgacaacaat 19491855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19492148 - 19492079
Alignment:
Q  1 aaatcgatgaattttaccaaaaaa--taataatactaaatatatgttataaatggtatatagtcataaat 68  Q
    ||||||||| ||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||||||    
T  19492148 aaatcgatggattttaccaaaaaaaataataatgctaaatatatgttataaattgtatatagtcataaat 19492079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 25539222 - 25539353
Alignment:
Q  83 gaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctgg 182  Q
    |||||||| ||||| || ||||||| ||||||||||   |||||| ||||||| |||||||||| ||||   ||||||||||||| |  |||| || ||     
T  25539222 gaaatcgttaaatcgcagtcaaaatcgatggattttgcttattttcggattctcctatggatttaagtcgttgaaggtgaagaaaattgcaaattcttga 25539321  T
Q  183 attttagtatttaagtcgggattttgacaaca 214  Q
    ||||||| |||||| |||||||||| ||||||    
T  25539322 attttaggatttaaatcgggattttaacaaca 25539353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 19262242 - 19262285
Alignment:
Q  13 tttaccaaaaaataataatactaaatatatgttataaatggtat 56  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  19262242 tttaccaaaaaataataatactaactatatgttataaatggtat 19262285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25539059 - 25539138
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataa-taatactaaatatatgttataaatggtatatagtcataaatgacttagttta 79  Q
    ||||||||  |||||||||||| | || |||| |||||||||||||||| || |||||||||||||||||||| ||||||    
T  25539059 aaatcgatagattttaccaaaacagaaataatgctaaatatatgttatatattgtatatagtcataaatgactcagttta 25539138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 34841796 - 34841717
Alignment:
Q  1 aaatcgatgaatttta-ccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 79  Q
    ||||||||| ||| || ||||| || ||||||| |||||||||||||||||| |||||||||||||||| ||| ||||||    
T  34841796 aaatcgatggattctatccaaacaaaaataataataaatatatgttataaattgtatatagtcataaataactcagttta 34841717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 15266187 - 15266081
Alignment:
Q  111 tggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgac 210  Q
    ||||||||| ||||||| | ||| ||  |||||||||| |||  |||| |||| ||||| ||||||||||| ||||||| |||||| ||  |||||||||    
T  15266187 tggatttttcctattttggaattataacatggatttgaatcattgaagatgaataaagttacaaaatcctgaattttaggatttaaatcatgattttgac 15266088  T
Q  211 aacaatg 217  Q
    |||||||    
T  15266087 aacaatg 15266081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 16766989 - 16766922
Alignment:
Q  13 tttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 79  Q
    |||||||||| || |||||| |||||||| |||||||||| ||||| |||||||||||||| ||||||    
T  16766989 tttaccaaaacaaaaataatgctaaatatttgttataaattgtatacagtcataaatgactcagttta 16766922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31023517 - 31023450
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaa 67  Q
    ||||||||| |||||||||||| || ||||||  |||||||||||||||||| ||| |||||||||||    
T  31023517 aaatcgatggattttaccaaaataaaaataatgttaaatatatgttataaatagtaaatagtcataaa 31023450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 41002202 - 41002156
Alignment:
Q  26 aataatactaaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||    
T  41002202 aataatgctaaatatatgttataaattgcatatagtcataaatgact 41002156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 974507 - 974467
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatgactta 74  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  974507 taaatatatgttataaattgcatatagtcataaatgactta 974467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8428437 - 8428369
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaat 68  Q
    ||||||||||||| |||||||| || |||||| |||| ||||| ||||||||  |||||||||||||||    
T  8428437 aaatcgatgaattataccaaaacaaaaataatgctaactatatattataaattatatatagtcataaat 8428369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 13502561 - 13502601
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  13502561 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 13502601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13502587 - 13502639
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatg 52  Q
    ||||||||| |||||||||||| || ||||||| |||||||||||||||||||    
T  13502587 aaatcgatggattttaccaaaacaaaaataatattaaatatatgttataaatg 13502639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 19245196 - 19245152
Alignment:
Q  173 aaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||    
T  19245196 aaaatcctgaattttaaaatttaagtcgggattttgacaacaatg 19245152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 27407032 - 27406993
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggattt 117  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  27407032 tataagaaatcataaaatcgcaatcaaaattgatggattt 27406993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 31023318 - 31023259
Alignment:
Q  121 ctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcct 180  Q
    ||||||||||||||||||||| |||||||||   ||| ||||| |||||| |||||||||    
T  31023318 ctattttaggattctactatgaatttgagtcgttgaaagtgaataaagtcgcaaaatcct 31023259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 5395682 - 5395780
Alignment:
Q  121 ctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 219  Q
    |||||||  |||||| ||||||||||||||||   ||| |||| |||||| |||||||||  ||||||  ||||| |||   |||||||||||||||||    
T  5395682 ctattttgagattctgctatggatttgagtcatttaagatgaataaagtcgcaaaatcctatattttatgatttaggtcaaaattttgacaacaatggt 5395780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 16766804 - 16766710
Alignment:
Q  122 tattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 216  Q
    |||||||||||||| |||||||||||| ||   ||||||||| ||| ||  ||||||||  ||||||  |||||||||   ||||||||||||||    
T  16766804 tattttaggattctgctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaagtcaaaattttgacaacaat 16766710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21869248 - 21869321
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatgactta 74  Q
    |||||||||| || |||||||| || ||| || ||||||||||||||||||| | |||||||||||||| |||||    
T  21869248 aaatcgatga-ttctaccaaaacaaaaattatgctaaatatatgttataaattgcatatagtcataaataactta 21869321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 26251696 - 26251658
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  26251696 taaatatatgttataaattgcatatagtcataaatgact 26251658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 5395446 - 5395507
Alignment:
Q  11 attttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatgac 71  Q
    |||||||||||| || ||||||  | || ||||||||||||| |||||||||||||||||||    
T  5395446 attttaccaaaacaaaaataatgttcaaaatatgttataaattgtatatagtcataaatgac 5395507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 15627715 - 15627654
Alignment:
Q  156 aaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||||| |||  ||||||||| |  ||||||| |||||||||||||||||||||| ||||    
T  15627715 aaggtgaataaaaccacaaaatcataaattttaggatttaagtcgggattttgacaataatg 15627654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 29660938 - 29660893
Alignment:
Q  171 acaaaatcctggattttagtatttaagtcgggattttgacaacaat 216  Q
    |||||||||| |||||||| |||||||||||  |||||||||||||    
T  29660938 acaaaatcctagattttaggatttaagtcggatttttgacaacaat 29660893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 35565845 - 35565885
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  35565845 tataagaaatcataaaatcacaatcaaaatcgatggatttt 35565885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 1e-78; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 11879815 - 11879599
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  11879815 aaatcgatggattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaa 11879716  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| |||| |||||| |||||||||||||||||||| ||||||||||   ||| |||||||||||  |||||||||| ||||||| |||||||||     
T  11879715 tcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtca 11879616  T
Q  201 ggattttgacaacaatg 217  Q
    | |||||||||||||||    
T  11879615 gaattttgacaacaatg 11879599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 11897231 - 11897015
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  11897231 aaatcgatggattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaa 11897132  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| |||| |||||| |||||||||||||||||||| ||||||||||   ||| |||||||||||  |||||||||| ||||||| |||||||||     
T  11897131 tcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtca 11897032  T
Q  201 ggattttgacaacaatg 217  Q
    | |||||||||||||||    
T  11897031 gaattttgacaacaatg 11897015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 2 - 219
Target Start/End: Complemental strand, 5922263 - 5922046
Alignment:
Q  2 aatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaat 101  Q
    |||||||| |||||||| |||||   |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||| |||||| ||||    
T  5922263 aatcgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcgcaaaatcgcaat 5922164  T
Q  102 caaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgg 201  Q
    |||||| |||||||||| |||||||| |||||||||||||||| | ||||   ||||||||||||||||||||||||||||||||||| |||||||||||    
T  5922163 caaaatcgatggattttgtctattttgggattctactatggatataagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgg 5922064  T
Q  202 gattttgacaacaatggt 219  Q
    ||||||||||||||||||    
T  5922063 gattttgacaacaatggt 5922046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 15294884 - 15294672
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||| ||| |||||||| ||||| ||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||| |||||||| |||    
T  15294884 aaatccatggattttacctaaaaa-aataatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaa 15294786  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| ||||||||||  ||||||| | |||||||||| ||||||||||   ||||||||| |||||| |||||||||| ||||||| ||||||||||    
T  15294785 tcaaaatcgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcg 15294686  T
Q  201 ggattttgacaaca 214  Q
    ||||||| ||||||    
T  15294685 ggatttttacaaca 15294672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 15475253 - 15475041
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||| ||| |||||||| ||||| ||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||| |||||||| |||    
T  15475253 aaatccatggattttacctaaaaa-aataatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaa 15475155  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| ||||||||||  ||||||| | |||||||||| ||||||||||   ||||||||| |||||| |||||||||| ||||||| ||||||||||    
T  15475154 tcaaaatcgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcg 15475055  T
Q  201 ggattttgacaaca 214  Q
    ||||||| ||||||    
T  15475054 ggatttttacaaca 15475041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 31424360 - 31424162
Alignment:
Q  19 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||  |||||||||    
T  31424360 aaaaaaaaaaaatactaaatatatgttataattggtatatagtcataaacgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggatttt 31424261  T
Q  119 ttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
      ||||||| ||||||| |||||||||||||||   ||| | ||||||||||  ||||||||| ||||||| ||||||||| |||||||||||| ||||    
T  31424260 gcctattttgggattcttctatggatttgagtcgttgaaagggaagaaagtcgtaaaatcctgaattttagaatttaagtcaggattttgacaataatg 31424162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 45403245 - 45403029
Alignment:
Q  1 aaatcgatgaattttaccaaaaaa-taataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctca 99  Q
    ||||||||  |||||||||||||| |||||||| |||||||||||||||||||||||||  ||||||||||||| ||| ||||| |||||||||||| ||    
T  45403245 aaatcgatagattttaccaaaaaaataataatattaaatatatgttataaatggtatattatcataaatgacttggttgataaggaatcgtaaaatcgca 45403146  T
Q  100 atcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtc 199  Q
    |||||||| ||||||||||   ||||||  |||||| |||||||||| ||||   |||||| ||||||||| ||||||| |||||||||| |||||||||    
T  45403145 atcaaaatcgatggattttgcttattttgagattcttctatggatttaagtcgttgaaggtcaagaaagtcgcaaaatcttggattttagaatttaagtc 45403046  T
Q  200 gggattttgacaacaat 216  Q
    | |||||||||||||||    
T  45403045 gcgattttgacaacaat 45403029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 23142389 - 23142240
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  23142389 aaatcgatggactttaccaaaaa-taataatactaaatatatgttataaatggtatatagtcataaatgacttaatttataagaaatcgtaaaatcgcaa 23142291  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtc 151  Q
    ||||||| |||| |||||  |||||||||||||||||||||||||| ||||    
T  23142290 tcaaaatcgatgaattttgcctattttaggattctactatggatttcagtc 23142240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 3094175 - 3094378
Alignment:
Q  19 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttata----------agaaatcgtaaaatctcaatcaaaatt 108  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||          | ||||||||||||| ||||||||||     
T  3094175 aaaaaaaaaaaatactaaatatatgttataaatggtatatagtcataaatgacttagtttatataaaaaaaaaaaaaatcgtaaaatcgcaatcaaaatc 3094274  T
Q  109 gatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttg 208  Q
    ||||||||||  |||||||||||||||||||||||||||||||   |||||||||||||||  |||||||||| ||||||  ||||||||||  ||||||    
T  3094275 gatggattttgcctattttaggattctactatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctgaattttaagatttaagtcgaaattttg 3094374  T
Q  209 acaa 212  Q
    ||||    
T  3094375 acaa 3094378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 6811035 - 6810861
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||  ||    
T  6811035 aaatcgatggattttaccaaaaaa-aataatactaaatatatgttataaatgatatatagttataaatgacttagtttatatgaaatcgtaaaatcgtaa 6810937  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaat 177  Q
    ||||||| ||| ||||||  ||||||||  |||||||||||||||||||||   |||||||||||||||| ||||||    
T  6810936 tcaaaatcgat-gattttgcctattttaaaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 6810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 29384249 - 29384444
Alignment:
Q  19 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||| ||||| |||| |||| |||||    
T  29384249 aaaaaatactaatactaaatatatgttataaatggtatatagtcataaatgaattgttttataagaaatcgtaaaatcgcaatc-aaatcgatgaatttt 29384347  T
Q  119 ttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaa 215  Q
      ||||||| ||||| |||||||||||||||||   |||||||||||||||| |||||||   |||||||| ||||||  | |||||||||||||||    
T  29384348 gcctatttttggattatactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatctaagattttaggatttaaacctggattttgacaacaa 29384444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 19704371 - 19704583
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||| ||||| || ||  |||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||  |||    
T  19704371 aaatcgatggattttacctaaaaaaaaaaa--ctaaatatatgttacaaatggtatatagtcataaataacttggtttataagaaatcgtaaaattgcaa 19704468  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcc-tggattttagtatttaagtc 199  Q
    ||||||| ||||||||||  ||||| | | |||||||||||||||||||||   |||||||||||||||| ||||| || || ||||||  ||||||||     
T  19704469 tcaaaatcgatggattttgcctattatggaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaaaccttgaattttaagatttaagtt 19704568  T
Q  200 gggattttgacaaca 214  Q
    |||||||||||||||    
T  19704569 gggattttgacaaca 19704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 27836378 - 27836596
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||||  ||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||    
T  27836378 aaatcgatggattttaccagcaaaaaaaaatactaaatacatgttataaatggtatatagtcataaatgacttagtttataagaaattgtaaaattgtaa 27836477  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    |||||||||||| |||||   |||||||| |||||||||||||||| |||    ||||||||| |||  | |||||||||| ||||||| || |||||      
T  27836478 tcaaaattgatgaattttgcttattttagaattctactatggatttcagttgttgaaggtgaataaaaccgcaaaatcctgaattttaggatctaagttt 27836577  T
Q  201 ggattttgacaacaatggt 219  Q
    | |||||||||||||||||    
T  27836578 gaattttgacaacaatggt 27836596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 31 - 217
Target Start/End: Original strand, 22910146 - 22910332
Alignment:
Q  31 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttagg 130  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| ||||||||||  |||||||||  |||||||| |    
T  22910146 tactaagtatatgttataaatggtatatagtcataaattacttaatttataagaaatcttaaaatcgcaatcaaaatcaatggattttgcctattttaag 22910245  T
Q  131 attctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||||||| ||||||||||   ||| ||||||||||||  ||||||||  ||||||| |||||||||||||| || ||| |||||    
T  22910246 attctactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagtcgggatgtttacatcaatg 22910332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 7489197 - 7489414
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||  |||    
T  7489197 aaatcgatgaattttactcaaaaatattaatactaaatatatgttataaatgatatatagtcataaatgacttaatttataagaaatcataaaattgcaa 7489296  T
Q  101 tcaaaattgatggattttttctat----tttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaa 196  Q
    ||||||| |||  ||||| |||||    ||||| ||||||||| |||||| ||||   ||||||||||||||   |||||| ||| ||||||  ||||||    
T  7489297 tcaaaatcgataaattttgtctattttatttagaattctactacggattttagtcgttgaaggtgaagaaag---caaaattctgtattttacgatttaa 7489393  T
Q  197 gtcgggattttgacaacaatg 217  Q
     | ||||||||||||| ||||    
T  7489394 ttggggattttgacaataatg 7489414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 17647212 - 17646993
Alignment:
Q  1 aaatcgatgaattttaccaaaaaa--taataatactaaatatatgttataaatggtatatagt--cataaatgacttagtttataagaaatcgtaaaatc 96  Q
    ||||||||| |||||| |||||||  |||||| | ||||||||| ||| |||||||||||| |   | ||||||||  |||||||||||||||| ||||     
T  17647212 aaatcgatggattttatcaaaaaaaataataacattaaatatattttacaaatggtatataataaaaaaaatgactaggtttataagaaatcgttaaata 17647113  T
Q  97 tcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaa 196  Q
     |||||||||| |||| |||||| ||||||| ||||||||||||| |||||||||   |||||||||||||||| |||||||||| ||||||  ||||||    
T  17647112 acaatcaaaatcgatgaatttttcctattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaa 17647013  T
Q  197 gtcgggattttgacaacaat 216  Q
    ||||| ||||||||||||||    
T  17647012 gtcggaattttgacaacaat 17646993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 37 - 148
Target Start/End: Complemental strand, 32424511 - 32424400
Alignment:
Q  37 atatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattcta 136  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||  ||  ||||| |||||||||||||||||    
T  32424511 atatatgttataaatggtatatagtcataaatgacttagtatataataaatcgtaaaatcgcaatcaaaatctataaattttgtctattttaggattcta 32424412  T
Q  137 ctatggatttga 148  Q
    ||||| ||||||    
T  32424411 ctatgaatttga 32424400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 9212202 - 9212296
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctatttta 128  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||| ||||||||||| ||||||||    
T  9212202 taaatataggttataaatggtatatggtcataaatgatttagtttataagaaatcttaaaatcgcaatcaaaatcgatggatttttcctatttta 9212296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 212
Target Start/End: Original strand, 6292282 - 6292467
Alignment:
Q  27 ataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattt 126  Q
    |||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||| |||| |||| | | |||||||||| | || ||||||  |||||    
T  6292282 ataatattaaatatattttataaatggtatatagtgataaatgacttagattataataaattgtaagaccgcaatcaaaatcgttgaatttttcttattt 6292381  T
Q  127 taggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaa 212  Q
    ||| ||| |||||||| ||||||||    ||| |||| |||||||||||||| |  ||||||  ||||||||||| ||||| ||||    
T  6292382 tagaattatactatgggtttgagtcgttaaagatgaaaaaagtcacaaaatcttaaattttaagatttaagtcggtattttaacaa 6292467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 477101 - 477177
Alignment:
Q  141 ggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||| |||||  ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  477101 ggatttaagtcattgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaacaatg 477177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 15761473 - 15761573
Alignment:
Q  121 ctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggtg 220  Q
    ||||||| ||||| | ||||| |||||||||   |||||| || ||| ||||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  15761473 ctattttgggattttgctatgaatttgagtcgttgaaggtaaataaactcacaaaatcctggagtttaggatttaagtcgagattttgacaacaatggtg 15761572  T
Q  221 t 221  Q
    |    
T  15761573 t 15761573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 24056594 - 24056698
Alignment:
Q  113 gattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaa 212  Q
    |||||| |||||||| |||||   |||||||||||||||    || ||||| |||||| |||||||||||||||||| |||||||||  |||||||| ||    
T  24056594 gattttgtctattttgggatttcgctatggatttgagtcgttaaatgtgaataaagtcgcaaaatcctggattttaggatttaagtcaagattttgataa 24056693  T
Q  213 caatg 217  Q
    |||||    
T  24056694 caatg 24056698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 15761272 - 15761353
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatggtatat--agtcataaatgacttagttta 79  Q
    ||||||||| |||||||||||| || |||||| ||||||||||||||||||| ||||||  |||||||||||| | ||||||    
T  15761272 aaatcgatggattttaccaaaacaaaaataatgctaaatatatgttataaattgtatatagagtcataaatgagtaagttta 15761353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 23136393 - 23136346
Alignment:
Q  172 caaaatcctggattttagtatttaagtcgggattttgacaacaatggt 219  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  23136393 caaaatcctgaattttaggatttaagtcgggattttgacaataatggt 23136346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 27672303 - 27672347
Alignment:
Q  175 aatcctggattttagtatttaagtcgggattttgacaacaatggt 219  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||    
T  27672303 aatcttggattttagaatttaagtcgggattttggcaacaatggt 27672347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 29384200 - 29384240
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  29384200 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 29384240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 17788374 - 17788436
Alignment:
Q  155 gaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    ||||||||  |||||| ||||||||| |||||||  |||||||| | ||||||||||||||||    
T  17788374 gaaggtgagtaaagtctcaaaatcctagattttaaaatttaagttgcgattttgacaacaatg 17788436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 40541781 - 40541819
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  40541781 taaatatatgttataaattgcatatagtcataaatgact 40541819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8582258 - 8582210
Alignment:
Q  1 aaatcgatgaattttaccaaaaaat-aataatactaaatatatgttata 48  Q
    |||||||||||||||||||||| || ||||||  |||||||||||||||    
T  8582258 aaatcgatgaattttaccaaaacataaataatgttaaatatatgttata 8582210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 16752192 - 16752156
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatga 70  Q
    |||||||||||||||||| | ||||||||||||||||    
T  16752192 taaatatatgttataaattgcatatagtcataaatga 16752156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 26879810 - 26879778
Alignment:
Q  84 aaatcgtaaaatctcaatcaaaattgatggatt 116  Q
    ||||||||||||| |||||||||||||||||||    
T  26879810 aaatcgtaaaatcgcaatcaaaattgatggatt 26879778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 116
Target Start/End: Original strand, 30240264 - 30240296
Alignment:
Q  84 aaatcgtaaaatctcaatcaaaattgatggatt 116  Q
    ||||||||||||| |||||||||||||||||||    
T  30240264 aaatcgtaaaatcgcaatcaaaattgatggatt 30240296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 4e-78; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 26053210 - 26053425
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||    
T  26053210 aaatcgatggattttaccaaaaaataataatactaactatatgttataaatggtatatagtcataaataacttagtttataagaaatcgtaaaatgacaa 26053309  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||||||||||||||   |||||| |||||||| |||| ||||||||||  |||||||||||||||| ||||||||| |||||||  ||||||||||    
T  26053310 tcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcg 26053409  T
Q  201 ggattttgacaacaat 216  Q
    ||||||||||||||||    
T  26053410 ggattttgacaacaat 26053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 26073263 - 26073478
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||    
T  26073263 aaatcgatggattttaccaaaaaataataatactaactatatgttataaatggtatatagtcataaataacttagtttataagaaatcgtaaaatgacaa 26073362  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||||||||||||||   |||||| |||||||| |||| ||||||||||  |||||||||||||||| ||||||||| |||||||  ||||||||||    
T  26073363 tcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcg 26073462  T
Q  201 ggattttgacaacaat 216  Q
    ||||||||||||||||    
T  26073463 ggattttgacaacaat 26073478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 23898026 - 23897810
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  23898026 aaatcgatggattttaccaaaaaaaaaaaatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaa 23897927  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| |||||||||   ||||||||| ||| |||||||||||||||||   ||| |||||||||||| |||||||||| ||||||| ||||||||||    
T  23897926 tcaaaatcgatggatttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcattttaggatttaagtcg 23897827  T
Q  201 ggattttgacaacaatg 217  Q
    |||| ||  ||||||||    
T  23897826 ggatcttatcaacaatg 23897810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 19748548 - 19748329
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| ||||||||| |||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||    
T  19748548 aaatcgatggattttaccagaaaataataatactaaatatattttataaatgatatatagtcttaaatgacttagtttataagaaatcgtaaaatcacaa 19748449  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| |||| |||||  |||||||| |||||||||| ||||||||||||   |||||||||||| || |||||||||||||| ||  ||||||||||    
T  19748448 tcaaaatcgatgaattttgcctattttaagattctactacggatttgagtcattaaaggtgaagaaaatctcaaaatcctggattgtaagatttaagtcg 19748349  T
Q  201 ggattttgacaacaatggtg 220  Q
    ||||||||| ||||||||||    
T  19748348 ggattttgaaaacaatggtg 19748329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 28 - 216
Target Start/End: Original strand, 15528051 - 15528239
Alignment:
Q  28 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctatttt 127  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||| |||||||||| ||||||||    
T  15528051 taatactaaatatatgttataaatggtatatagttataaatgacttagtttataagaaatcgtaaaatcgcaatcgaaatcgatggattttgtctatttt 15528150  T
Q  128 aggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 216  Q
    | |||||||||||| |||| ||||    ||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  15528151 aagattctactatgaatttaagtcgttaaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 15528239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 17543672 - 17543870
Alignment:
Q  19 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||  || ||||||    
T  17543672 aaaaaataataatactaaatatatgttataaatggtatatagtcgtaaatgacttagtttataagaaatagtaaaatcgcaatcaaaatccatagatttt 17543771  T
Q  119 ttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
       ||||||| ||||||||||||||||||||||   ||| ||||| |||||| |||||||||| ||||||| |||||||||| ||||||||||||||||    
T  17543772 gcttattttaagattctactatggatttgagtcgttgaaagtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgagattttgacaacaatg 17543870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 30912337 - 30912542
Alignment:
Q  12 ttttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgat 111  Q
    |||||||| |||| ||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||  ||    
T  30912337 ttttaccacaaaaaaataatactaaatatatgtgataaatgatatataatcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatctat 30912436  T
Q  112 ggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgaca 211  Q
    |||||||  |||||||  ||||||| ||||||||||||||   |||||||||||||||| |||||||||  ||||||| |||||||| ||||||||||||    
T  30912437 ggattttgcctattttgtgattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgaca 30912536  T
Q  212 acaatg 217  Q
    ||||||    
T  30912537 acaatg 30912542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 17250271 - 17250057
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||| ||| |||||||||||||| |||| || ||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||    
T  17250271 aaatcaatggattttaccaaaaaacaatagtaataaatatatattataaatt-tatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaa 17250173  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    |||||||  ||| |||||  ||||||| |||||||| ||||||||| ||||   |||||||||||||||  |||||||||||||||||| ||||||||||    
T  17250172 tcaaaatcaatgaattttgcctattttgggattctagtatggatttaagtcgttgaaggtgaagaaagttgcaaaatcctggattttaggatttaagtcg 17250073  T
Q  201 ggattttgacaacaat 216  Q
    ||||||| ||||||||    
T  17250072 ggattttaacaacaat 17250057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 2 - 217
Target Start/End: Complemental strand, 7223729 - 7223518
Alignment:
Q  2 aatcgatgaattttaccaaaaaataataatactaaat----atatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatct 97  Q
    |||| ||| ||||||||||| || |||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  7223729 aatcaatggattttaccaaacaa-aataatactaaattaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcg 7223631  T
Q  98 caatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaag 197  Q
    |||||||||| ||||||||||   |||||| | |||||||||||||||| ||       |||||||||||||| |||||||||  ||||||| |||||||    
T  7223630 caatcaaaatcgatggattttgcttattttggaattctactatggatttaag-------aggtgaagaaagtcgcaaaatcctaaattttaggatttaag 7223538  T
Q  198 tcgggattttgacaacaatg 217  Q
    ||||||||||||||||||||    
T  7223537 tcgggattttgacaacaatg 7223518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 17103410 - 17103201
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||| ||||| | ||||| ||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||||||||||||  ||    
T  17103410 aaatcgatggattttacctaaaaaaattaataataaatatatgtcataaatgatatatagtcgtaaataacttagtttataagaaatcgtaaaatcgtaa 17103311  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| |||||||||| |||||||| ||||||||||||| |||||||||   ||| ||       ||| |||||||||| ||||||  ||||||||||    
T  17103310 tcaaaatcgatggattttgtctattttgggattctactatgcatttgagtcgttgaaagt-------gtcgcaaaatcctgaattttaagatttaagtcg 17103218  T
Q  201 ggattttgacaacaatg 217  Q
    |||||||||||||||||    
T  17103217 ggattttgacaacaatg 17103201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 28 - 219
Target Start/End: Complemental strand, 21354928 - 21354745
Alignment:
Q  28 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctatttt 127  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||  |||||||||| ||||||||    
T  21354928 taatactaaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaataaaaaacgatggattttgtctatttt 21354829  T
Q  128 aggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 219  Q
     ||||||||| |||||||| ||||   |||||| |||||||        ||| ||||||||| |||||||| ||||||||||||||||||||    
T  21354828 gggattctaccatggatttaagtcgttgaaggtaaagaaag--------tccaggattttaggatttaagttgggattttgacaacaatggt 21354745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 44 - 216
Target Start/End: Original strand, 7918338 - 7918510
Alignment:
Q  44 ttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatgga 143  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||| |||||| |||||||||| ||| ||||||   ||| |||||||| |||||||||    
T  7918338 ttataaatgatatatagtcataaatgacttaatttataaaaaatcgcaaaatcccaatcaaaatcgattgattttgcttatgttaggattttactatgga 7918437  T
Q  144 tttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 216  Q
    ||| ||||   ||||||||| |||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  7918438 tttaagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 27233268 - 27233407
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaat 177  Q
    ||||||||||| ||||||| |||||||||| |||||||||| |||||||| |||||||||||||||||| ||||   |||||||||||||||||||||||    
T  27233268 tataagaaatcataaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaat 27233367  T
Q  178 cctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||||||||| ||||||||||| | |||||||||||||    
T  27233368 cctggattttaggatttaagtcggtagtttgacaacaatg 27233407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 10508931 - 10509155
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatg------gtatatagtcataaatgacttagtttataagaaatcgtaaa 93  Q
    |||| |||| |||||| ||||| |||||||||| |||||||||||||||||||      ||||||||| |||||||||||||||||||| || |||||||    
T  10508931 aaattgatggattttatcaaaataataataataataaatatatgttataaatgacttaggtatatagt-ataaatgacttagtttataataagtcgtaaa 10509029  T
Q  94 atctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatt 193  Q
    |||  ||||||||| |||| |||||  ||||||| ||||||||||||  ||||||||||  ||| ||||||||||||||||| | ||| ||||||| |||    
T  10509030 atcgtaatcaaaatcgatgaattttgcctattttgggattctactataaatttgagtcattgaatgtgaagaaagtcacaaatttctgaattttaggatt 10509129  T
Q  194 taagtcgggattttgacaacaatggt 219  Q
    |||||| |||||||||||| ||||||    
T  10509130 taagtctggattttgacaataatggt 10509155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 34 - 217
Target Start/End: Original strand, 11327518 - 11327701
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggatt 133  Q
    |||||| |||| |||||||||||| |||||||||||| |||||| |||||||| ||||||||| |||| ||||| |||| |||||  ||||||| |||||    
T  11327518 taaatacatgtgataaatggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggatt 11327617  T
Q  134 ctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    ||||||||||||| ||||   |||| ||||||||  | ||||| | ||||||||||  ||||||||||||||||||||||||||    
T  11327618 ctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaatg 11327701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 45 - 208
Target Start/End: Original strand, 22498843 - 22499006
Alignment:
Q  45 tataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggat 144  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||  |||| ||||| |||||||||| ||||||||  |||| ||||||||||    
T  22498843 tatagatggtatatagtcataaatgacttcgtttataagaaatcgtaaaattgcaattaaaatcgatggattttgtctattttgagattgtactatggat 22498942  T
Q  145 ttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttg 208  Q
    |||||||    ||||||||||||||| ||||||  |||| ||||| |||| ||| |||||||||    
T  22498943 ttgagtcgttcaaggtgaagaaagtcgcaaaattgtggaatttaggattttagttgggattttg 22499006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 217
Target Start/End: Original strand, 6943464 - 6943590
Alignment:
Q  91 aaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagt 190  Q
    |||||| |||||||||| |||| ||||| ||||||||  ||||||||||| ||||||||||   |||||||||||||||| |||||||||| |||||||     
T  6943464 aaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagg 6943563  T
Q  191 atttaagtcgggattttgacaacaatg 217  Q
    |||||||||||||||||||||||||||    
T  6943564 atttaagtcgggattttgacaacaatg 6943590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 2912218 - 2912373
Alignment:
Q  57 atagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcaggga 156  Q
    ||||||||||||||||| |||||||| ||||||||||||  |||||||||| |||| |||||   ||||||| ||||||||||| ||||||| ||   ||    
T  2912218 atagtcataaatgactttgtttataaaaaatcgtaaaattgcaatcaaaatcgatgaattttgcttattttaagattctactat-gatttgaatcgttga 2912316  T
Q  157 aggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaac 213  Q
    || || |||||||  |||||||||  ||||||  |||||||||||||||||||||||    
T  2912317 agatggagaaagttgcaaaatcctaaattttaagatttaagtcgggattttgacaac 2912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7918264 - 7918343
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataa 82  Q
    ||||||||| ||||||||||||||  |||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||    
T  7918264 aaatcgatggattttaccaaaaaa--ataatactaaatttatgttataaatgatatatagtcataaatgacttaatttataa 7918343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 219
Target Start/End: Original strand, 18491074 - 18491169
Alignment:
Q  124 ttttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 219  Q
    |||| ||||||| |||||||||||||||   ||||||||| ||||   |||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  18491074 ttttgggattctgctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggattttgacagcaatggt 18491169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 5422798 - 5422880
Alignment:
Q  137 ctatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 219  Q
    |||| ||||||||||   ||||||||| |||||  ||||||| || |||||||||||||||||||||||||||||||||||||    
T  5422798 ctatagatttgagtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaacaatggt 5422880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 27233213 - 27233271
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatata 59  Q
    ||||||||  ||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  27233213 aaatcgatagattttaccataaaacaataatactaaatatatgttataaatggtatata 27233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 27614594 - 27614651
Alignment:
Q  39 atatgttataaatggtatatagtcataaatgact--tagtttataagaaatcgtaaaa 94  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  27614594 atatgttataaatggtatatagtcataaatgaattatagtttataagaaatcgtaaaa 27614651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 3573984 - 3574059
Alignment:
Q  139 atggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaaca 214  Q
    |||||||||||||   |||||||||||||||| | |||| ||||||||||| ||||||||||| ||||||| ||||    
T  3573984 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctggattttagaatttaagtcggaattttgaaaaca 3574059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 645466 - 645417
Alignment:
Q  23 aataataatactaaatatatgttataaatggtatatagtcataaatgact 72  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||||||||    
T  645466 aataataatgctaaatatatgttataaattgcatatagtcataaatgact 645417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 5422583 - 5422644
Alignment:
Q  11 attttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatgac 71  Q
    |||||||||||| || |||||| |||||||||||||||||||  ||||||||||||||||||    
T  5422583 attttaccaaaacaaaaataatgctaaatatatgttataaattatatatagtcataaatgac 5422644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 18490998 - 18491063
Alignment:
Q  124 ttttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttag 189  Q
    |||||||||||| ||||||||||||||||  ||||||||| |||||  |||||| |||||||||||    
T  18490998 ttttaggattctgctatggatttgagtcattgaaggtgaataaagttgcaaaatgctggattttag 18491063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 27890581 - 27890519
Alignment:
Q  9 gaattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatga 70  Q
    ||||| |||||||| || |||||| ||||||||||||||||||| | ||||||||||||||||    
T  27890581 gaattctaccaaaacaaaaataatgctaaatatatgttataaattgcatatagtcataaatga 27890519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 10508905 - 10508945
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  10508905 tataagaaattgtaaaatcgcaatcaaaattgatggatttt 10508945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 23898052 - 23898012
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    |||||||||| ||||||||||||||||||| ||||||||||    
T  23898052 tataagaaattgtaaaatctcaatcaaaatcgatggatttt 23898012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 10958266 - 10958319
Alignment:
Q  166 aagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 219  Q
    ||||| |||||||||| |||||   |||||||||| ||||||||||||||||||    
T  10958266 aagtcgcaaaatcctgaattttgagatttaagtcgcgattttgacaacaatggt 10958319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20400000 - 20400068
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaat 68  Q
    ||||||||| |||  ||||||| || ||||||  |||||||||||||||||| | ||||||||||||||    
T  20400000 aaatcgatggattccaccaaaacaaaaataatgataaatatatgttataaattgcatatagtcataaat 20400068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20432520 - 20432587
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaat 68  Q
    ||||||||| |||  ||||||| || ||||||||||| |||||||||||||| | ||||||||||||||    
T  20432520 aaatcgatggattccaccaaaacaaaaataatactaa-tatatgttataaattgcatatagtcataaat 20432587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 4e-78; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 9770327 - 9770112
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||| |||    
T  9770327 aaatcgatgaattttacccaaaaaaattaatactaaatatatgttatgaatggtatatagtcataagtaacttagtttataagaaatcgtaaaatcgcaa 9770228  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||| |||||||| ||||||||||    
T  9770227 tcaaaattgatagattttgtctattttaggattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcctagattttagaatttaagtcg 9770128  T
Q  201 ggattttgacaacaat 216  Q
     |||||| ||||||||    
T  9770127 agattttaacaacaat 9770112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 29 - 217
Target Start/End: Original strand, 5361905 - 5362093
Alignment:
Q  29 aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctatttta 128  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||     
T  5361905 aatactaaatatatgttaaaaatggtatataatcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaatcgatgggttttgcctattttg 5362004  T
Q  129 ggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    | |||||||||||||||||||||   |||| ||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  5362005 gaattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaatg 5362093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 8889441 - 8889225
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    |||||||||||||||||||| ||| ||  ||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||    
T  8889441 aaatcgatgaattttaccaacaaaaaa--atactaaatatatattataaatggtatatagtcataaacgacttggtttataagaaatcgtaaaatcgcaa 8889344  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| |||| |||||  ||||||| |||||||| |||| |||||||||   || |||||||||| ||||||||||||||||||||| ||||||||||    
T  8889343 tcaaaatcgatgaattttgcctattttgggattctattatgaatttgagtcgttgatggtgaagaaattcacaaaatcctggattttaggatttaagtcg 8889244  T
Q  201 ggattttgacaacaatggt 219  Q
    ||||||||||| |||||||    
T  8889243 ggattttgacatcaatggt 8889225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 9911325 - 9911541
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9911325 aaatcgatggactttaccaaaaaataataatacttaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaa 9911424  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagta-tttaagtc 199  Q
    ||||||| ||||||||||  | ||||||||||||||||||||||||  | |   |||||||||||||||  ||||||| || ||||||| | ||||| ||    
T  9911425 tcaaaatcgatggattttgccaattttaggattctactatggatttaggccgttgaaggtgaagaaagttgcaaaatcttgaattttaggattttaaatc 9911524  T
Q  200 gggattttgacaacaat 216  Q
    ||||||| |||||||||    
T  9911525 gggatttagacaacaat 9911541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 13023767 - 13023566
Alignment:
Q  19 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||||||    
T  13023767 aaaaaaaattaatactaaatatatgttataaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcgattgatttt 13023668  T
Q  119 ttcta--ttttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctgga-ttttagtatttaagtcgggattttgacaacaa 215  Q
     ||||  |||| ||||||||||||||||||||||||  |||||||||||||||| |||||||||  | |||||| |||||||| ||||||||||||||||    
T  13023667 atctattttttgggattctactatggatttgagtcattgaaggtgaagaaagtcgcaaaatcctaaatttttaggatttaagttgggattttgacaacaa 13023568  T
Q  216 tg 217  Q
    ||    
T  13023567 tg 13023566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 11 - 217
Target Start/End: Original strand, 23064885 - 23065093
Alignment:
Q  11 attttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgactta--gtttataagaaatcgtaaaatctcaatcaaaatt 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||  |||||||||||||||||||||  |||| |||||     
T  23064885 attttaccaaaaaataataatactaaatatatgttataaatgatatagggtcataaatgacttatagtttataagaaatcgtaaaattgcaattaaaatc 23064984  T
Q  109 gatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttg 208  Q
    |||||||||   ||||||||| ||||||| |||||||||||||   ||| ||||||||||| ||||||| ||||||||||| |||||||||||| ||||     
T  23064985 gatggatttgacctattttagaattctacaatggatttgagtcgttgaatgtgaagaaagttacaaaatactggattttagaatttaagtcggggtttta 23065084  T
Q  209 acaacaatg 217  Q
    |||||||||    
T  23065085 acaacaatg 23065093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 36121038 - 36120823
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  36121038 aaatcgatggattttaccaaaaa-taataatactaaatatattttataaatggtatatagtcataaatgacttagtatataagaaatcgtaaaatcgcaa 36120940  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| |||| |||||   |||||||| ||| || ||||||||| ||||   ||||||||||||| || |||||||||  ||||||  |||||| |||    
T  36120939 tcaaaatcgatgaattttgcttattttagaattttattatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctaaattttaaaatttaaatcg 36120840  T
Q  201 ggattttgacaacaatg 217  Q
    | |||||||||||||||    
T  36120839 gaattttgacaacaatg 36120823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 10143096 - 10142898
Alignment:
Q  19 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    |||||| ||||||||||||||||| |||||| |||||||||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||    
T  10143096 aaaaaaaaataatactaaatatatattataattggtatatagtcataaatgacttgatttataagaaatcgtaaaatcacaatcaaaatcgatggatttt 10142997  T
Q  119 ttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
     |||||||| | ||| ||||||||| ||||||||  ||||||| |||||||| ||||||  |  ||||||| ||||||||||||||||| |||||||||    
T  10142996 gtctattttggaattatactatggacttgagtcattgaaggtggagaaagtcgcaaaatattaaattttagaatttaagtcgggattttcacaacaatg 10142898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 17466294 - 17466080
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| ||||||| | |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  17466294 aaatcgatggattttacaacaaaaaaataatattaaatatatgttataaatggtatatagtcataaatgacttagtttattagaaatcgtaaaatcgcaa 17466195  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    || |||| ||||||||||   ||||||||||||||| ||||||||||||||    ||| |||||||| || |||||||||  ||||||  |||||||| |    
T  17466194 tctaaatcgatggattttgcttattttaggattctattatggatttgagtccttaaagatgaagaaaatcgcaaaatcctaaattttaagatttaagttg 17466095  T
Q  201 ggattttgacaacaa 215  Q
    | |||||||||||||    
T  17466094 gaattttgacaacaa 17466080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 5375880 - 5375666
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataat-aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctca 99  Q
    ||||||||| |||||||| ||||| ||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||    
T  5375880 aaatcgatggattttacccaaaaaaaattaatactaaatatatgttataaatgatatatggtcataaatgacttagtttataagaaatcgtaaaatcgca 5375781  T
Q  100 atcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtc 199  Q
    |||||| | |||| ||||| |||||||||  |||||| |||| |||| ||||   |||||||||||||||| ||||||| |  ||||||| ||||| ||     
T  5375780 atcaaagtcgatgaattttgtctattttaaaattctattatgaattttagtcgttgaaggtgaagaaagtcgcaaaatcttaaattttagaatttaggtt 5375681  T
Q  200 gggattttgacaaca 214  Q
    |||||||||||||||    
T  5375680 gggattttgacaaca 5375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 217
Target Start/End: Complemental strand, 37240455 - 37240261
Alignment:
Q  18 caaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattt 117  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||| |||| |||     
T  37240455 caaaatataataatactaaatatatgatataaatggtatagagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaatta 37240356  T
Q  118 tttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |  ||||||| || ||||||||||||||||||||   ||||||||| ||||||  ||    ||  ||||||| |||||||| |||||||| |||||||||    
T  37240355 tgcctatttt-gggttctactatggatttgagtcgttgaaggtgaaaaaagtcgtaa----ctaaattttaggatttaagtagggattttaacaacaatg 37240261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 63 - 217
Target Start/End: Original strand, 13551598 - 13551752
Alignment:
Q  63 ataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtga 162  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||| |||||||||| ||||||||   |||||| ||||||||||||||   ||||||||    
T  13551598 ataaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtga 13551697  T
Q  163 agaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    | |||||| |||||||||  ||||||| || ||||||| ||||||||||||||||    
T  13551698 aaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaatg 13551752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 8011212 - 8011345
Alignment:
Q  83 gaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctgg 182  Q
    ||||||| |||||| |||||||||| |||| |||||    ||||| |||||||||||||||||||||||   |||||||||||||||| ||||||||||     
T  8011212 gaaatcgcaaaatcgcaatcaaaatcgatgaattttgctcattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 8011311  T
Q  183 attttagtatttaagtcgggattttgacaacaat 216  Q
    ||||||| |||| ||| |||||||||||||||||    
T  8011312 attttaggatttgagttgggattttgacaacaat 8011345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 215
Target Start/End: Complemental strand, 7044821 - 7044728
Alignment:
Q  122 tattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaa 215  Q
    |||||| ||||||| |||||||||||||||   ||||||||| |||||  ||||||| |||||||||| |||||||||||||||||||||||||    
T  7044821 tattttgggattctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgacaacaa 7044728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 123 - 217
Target Start/End: Complemental strand, 24719610 - 24719516
Alignment:
Q  123 attttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    ||||||||||||| |||||||||||||||   ||||||||| |||||| ||||||| || ||||||| | |||||||| ||||||||||||||||    
T  24719610 attttaggattctgctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaacaatg 24719516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 18459733 - 18459838
Alignment:
Q  112 ggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgaca 211  Q
    |||||||  ||||||||||||||| |||||||||||||||   ||| ||||| | |||| ||||||| |||||||||| |||| |||||||||||| |||    
T  18459733 ggattttgcctattttaggattctgctatggatttgagtcgttgaaagtgaatacagtcgcaaaatcttggattttaggattttagtcgggatttttaca 18459832  T
Q  212 acaatg 217  Q
    ||||||    
T  18459833 acaatg 18459838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 4156857 - 4156763
Alignment:
Q  122 tattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 216  Q
    ||||||||||||||||||  ||||||||||    |||||||| ||||||| ||||||||  ||||||  ||||||||||||||||||||||||||    
T  4156857 tattttaggattctactacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaacaat 4156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 7815661 - 7815561
Alignment:
Q  112 ggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgaca 211  Q
    |||||||  ||||||| |||||||||||||| ||||||||    ||| |||| ||||||||||||| ||| ||||||| ||||||||||||||||| |||    
T  7815661 ggattttgcctattttgggattctactatgggtttgagtcgcttaagctgaataaagtcacaaaatgctgtattttaggatttaagtcgggattttaaca 7815562  T
Q  212 a 212  Q
    |    
T  7815561 a 7815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 8011050 - 8011129
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 79  Q
    ||||||||| |||||||||||| || |||||| ||||||||||||||||||| ||||||| | |||||||| ||||||||    
T  8011050 aaatcgatgtattttaccaaaacaaaaataatgctaaatatatgttataaattgtatataattataaatgaattagttta 8011129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 7452523 - 7452419
Alignment:
Q  112 ggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgaca 211  Q
    |||||||  |||| |||||| || |||||||||| |||||   ||||||||| |||||  |||||| ||||||||||| ||||||||||||||||| |||    
T  7452523 ggattttgcctatattaggaatccactatggatt-gagtcgttgaaggtgaataaagttgcaaaattctggattttagaatttaagtcgggattttcaca 7452425  T
Q  212 acaatg 217  Q
    ||||||    
T  7452424 acaatg 7452419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 9149647 - 9149709
Alignment:
Q  11 attttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||||||||||| || |||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  9149647 attttaccaaaagaaaaataatgctaaatatatgttataaattgtatatagttataaatgact 9149709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 6347114 - 6347194
Alignment:
Q  137 ctatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||||||||||||   |||||| || |||||  |||||||||||||||||| |||||||| || |||||||||| ||||    
T  6347114 ctatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaagttggaattttgacaataatg 6347194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24719790 - 24719722
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaat 68  Q
    |||||||||| ||||||||||  || ||||||  |||||||||||||||||| ||||||||||||||||    
T  24719790 aaatcgatgagttttaccaaagcaaaaataatgttaaatatatgttataaattgtatatagtcataaat 24719722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 5846058 - 5846104
Alignment:
Q  26 aataatactaaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||||| ||||||||||||||||||| |||||| |||||||||||||    
T  5846058 aataatgctaaatatatgttataaattgtatattgtcataaatgact 5846104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 7825239 - 7825186
Alignment:
Q  26 aataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 79  Q
    |||||| ||||||| | ||||||||| |||||||||||||||||||| ||||||    
T  7825239 aataatgctaaatacaagttataaattgtatatagtcataaatgactcagttta 7825186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 6346869 - 6346941
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatgact 72  Q
    ||||||||| |||| ||||||| || ||||||  |||||||||||||||||| |||||||  |||||||||||    
T  6346869 aaatcgatggatttcaccaaaacaaaaataatgataaatatatgttataaattgtatatatgcataaatgact 6346941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 7045004 - 7044964
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  7045004 tataagaaatcgtaaaatatcaatcaaaatcgatggatttt 7044964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7044978 - 7044899
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 79  Q
    ||||||||| |||||||||||| || ||||||  |||| || |||||||| | ||||||||| |||||||||| ||||||    
T  7044978 aaatcgatggattttaccaaaacaaaaataatgttaaacatgtgttataatttgtatatagtgataaatgactcagttta 7044899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7045157 - 7045078
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 79  Q
    ||||| ||| || ||||||||| || ||||||  |||||||||||||||| | ||||||||| |||||||||| ||||||    
T  7045157 aaatctatggatcttaccaaaacaaaaataatgttaaatatatgttataatttgtatatagtgataaatgactcagttta 7045078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 9149813 - 9149864
Alignment:
Q  165 aaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 216  Q
    |||||| |||||||||  ||||||| |||||||||||||||||||| |||||    
T  9149813 aaagtcgcaaaatcctaaattttaggatttaagtcgggattttgaccacaat 9149864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 610686 - 610720
Alignment:
Q  183 attttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||||||||||||| ||||||||||||||||||    
T  610686 attttagtatttaagttgggattttgacaacaatg 610720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 8409771 - 8409725
Alignment:
Q  26 aataatactaaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||||| |||||||||||||||||||   ||||||||||||||||||    
T  8409771 aataatgctaaatatatgttataaattacatatagtcataaatgact 8409725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 18403710 - 18403672
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  18403710 taaatatatgttataaattgtatatagtcatgaatgact 18403672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 55476165 - 55476119
Alignment:
Q  26 aataatactaaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||||| | ||||||||||||||||| | ||||||||||||||||||    
T  55476165 aataatgcaaaatatatgttataaattgcatatagtcataaatgact 55476119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 4157090 - 4157053
Alignment:
Q  81 aagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  4157090 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 4157053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 7815819 - 7815783
Alignment:
Q  43 gttataaatggtatatagtcataaatgacttagttta 79  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  7815819 gttataaattgtatatagtcataaatgactcagttta 7815783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 10143141 - 10143101
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||||| || |||||||| |||||||||||||||||||||    
T  10143141 tataagagattgtaaaatcgcaatcaaaattgatggatttt 10143101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 1e-75; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 9351977 - 9352196
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||    
T  9351977 aaatcgatgaattttacccaaaaaaattaatactaaatatatgttataaatggtatatagtcaaaaatgacttagtttataagaaatcataaaatcgcaa 9352076  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| || ||||||| |||||||| ||| ||| |||| ||||||||||   |||||||||||||||| ||||| |||||||||||| ||||||||||    
T  9352077 tcaaaatcgacggattttgtctattttgggactctgctatagatttgagtctttgaaggtgaagaaagtcgcaaaaccctggattttaggatttaagtcg 9352176  T
Q  201 ggattttgacaacaatggtg 220  Q
    ||||||||||||||||||||    
T  9352177 ggattttgacaacaatggtg 9352196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 13276180 - 13276395
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| | | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||    
T  13276180 aaatcgatggactataccaaaaaataataatactaaatatatgttataaatgatatatagtcataaatgacttaatttataagaaatcgtaaaatcgcaa 13276279  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| ||| ||||||  ||||||||||||||||||||||||||  |||   |||| ||||||||||| ||||||||| |||||||| |||||| |||    
T  13276280 tcaaaatcgattgattttgcctattttaggattctactatggatttaggtcgttgaagatgaagaaagtcgcaaaatcctagattttaggatttaaatcg 13276379  T
Q  201 ggattttgacaacaat 216  Q
    ||||||||||||||||    
T  13276380 ggattttgacaacaat 13276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 23528871 - 23528656
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||| || |||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||     
T  23528871 aaatcgatggattttacccaataataataataataaatatacgttataaatggtatatagtcataaatgacttcgtttataagaaatcgtaaaatcgcat 23528772  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| ||| ||||||  |||||||||||||||||||||||||||||||   |||| ||||||||||| |||||||||| ||||||  |||||||| |    
T  23528771 tcaaaatcgatagattttgcctattttaggattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaagatttaagttg 23528672  T
Q  201 ggattttgacaacaat 216  Q
    ||||||||||||||||    
T  23528671 ggattttgacaacaat 23528656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 18304725 - 18304941
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||| ||||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||    
T  18304725 aaatcgatggattttatcaaaaaaaattaatactaaatatacgttatgaatggtatatagtcataaatgacttagcttataagaaatcgt-aaatcgcaa 18304823  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtc-agggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtc 199  Q
    |||||||||||||||||| ||||||||  |||||||||||| |||||||||    |||||||||||||||| |||||| ||||||||||| ||||||||     
T  18304824 tcaaaattgatggattttgtctattttgagattctactatgaatttgagtcgtttgaaggtgaagaaagtcgcaaaatactggattttaggatttaagtt 18304923  T
Q  200 gggattttgacaacaatg 217  Q
    ||||||||||||||||||    
T  18304924 gggattttgacaacaatg 18304941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 13100405 - 13100188
Alignment:
Q  1 aaatcgatgaattttacc-aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctca 99  Q
    ||||||||| |||||||| |||||||||  ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| ||    
T  13100405 aaatcgatggattttacccaaaaaataa--atactaaatatatgttacaaatggtatatagtcataaatgacttggtttataagaaattgtaaaatcgca 13100308  T
Q  100 atcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtc 199  Q
    |||||||| ||||| ||||  |||||||||||||||||||||||||||||||   ||| ||||||||||||  |||||||| |||||||| ||||||||     
T  13100307 atcaaaatcgatggtttttgcctattttaggattctactatggatttgagtcgttgaacgtgaagaaagtcgtaaaatcctcgattttagaatttaagtt 13100208  T
Q  200 gggattttgacaacaatggt 219  Q
    ||||||||||||| ||||||    
T  13100207 gggattttgacaataatggt 13100188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 42179978 - 42180193
Alignment:
Q  1 aaatcgatgaattttaccaaaaaata-ataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctca 99  Q
    ||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  42179978 aaatcgatggattttaccaaaaaaaatataatactatatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtagaatcaca 42180077  T
Q  100 atcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtc 199  Q
    |||||||| |||| |||||  |||||||   |||||||||||||||||| ||   ||||| |||||||||| |||||||||| ||||||| ||||||||     
T  42180078 atcaaaatcgatgtattttgcctattttgaaattctactatggatttgactcgttgaaggggaagaaagtcgcaaaatcctgaattttagaatttaagtt 42180177  T
Q  200 gggattttgacaacaa 215  Q
    ||||||||||||||||    
T  42180178 gggattttgacaacaa 42180193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 9954967 - 9955165
Alignment:
Q  19 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  9954967 aaaaaataataatactgaatatatgttataaatggtatatagtcataaatgacctagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 9955066  T
Q  119 ttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
       |||||| |||||||||  ||||||| ||||   |||||||||||||||| |||||||||  ||||||| |||||||| ||||||||||||||||||    
T  9955067 gcttattttgggattctacattggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaatg 9955165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 9327128 - 9327345
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaa--tgacttagtttataagaaatcgtaaaatctc 98  Q
    |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||||||||| |    
T  9327128 aaatcgatgaattttacccaaaaa-aataatactaaatatatattataaatggtatatagtcaaaaaaatgacttagtttataagaaatcgtaaaatcgc 9327226  T
Q  99 aatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagt 198  Q
    ||||||||| |||||||||| |||||||| ||||| |||||| ||||||||||   ||||||| |||||||| ||||| |||  ||||||| ||||||||    
T  9327227 aatcaaaatcgatggattttgtctattttgggattttactatagatttgagtcgttgaaggtgtagaaagtcgcaaaaccctaaattttaggatttaagt 9327326  T
Q  199 cgggattttgacaacaatg 217  Q
    | ||||||| |||||||||    
T  9327327 caggattttaacaacaatg 9327345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 25146683 - 25146898
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||| ||||| | | |||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| || |||    
T  25146683 aaatcgatggattttacccaaaaaaattgatactaaatatacgttataaattgtatatagtcataaataacttagtttataagaaatcgtaaa-tcgcaa 25146781  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    | |||||||||| | ||| |||||||| ||||||||||||| |||||||||   |||||||||||||||| |||||| ||| ||||||| |||||||||     
T  25146782 ttaaaattgatgtactttgtctattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtca 25146881  T
Q  201 ggattttgacaacaatg 217  Q
    |||||||||||||||||    
T  25146882 ggattttgacaacaatg 25146898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 12513493 - 12513283
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||  |||||||||||||||| ||||| |||||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  12513493 aaatcgatagattttaccaaaaaata-taatattaaatat--gttatatatggtatatagtcgtaaatgacttagtttataagaaatcgtaaaatcgcaa 12513397  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| ||||||||||   ||||||| |||| |||||||||||||||||   |||| ||||||||||| ||||||||| |||| ||| ||||||||||    
T  12513396 tcaaaatcgatggattttgattattttatgattttactatggatttgagtcgttgaagctgaagaaagtcgcaaaatcctagattgtaggatttaagtcg 12513297  T
Q  201 ggattttgacaaca 214  Q
    ||||||||||||||    
T  12513296 ggattttgacaaca 12513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 16125369 - 16125580
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |  ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||    
T  16125369 aaatcgatggacgttacccaaaaataataatactaaatatatgttataaatggtatatattcataaatgacttagtttataaaaaatcgtaaaatcgcaa 16125468  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtg---aagaaagtcacaaaatcctggattttagtatttaag 197  Q
    |||||||  |||||||||  |||||||| |||| ||||||||||||  |||   |||||||   ||||||||| |||||||||| ||||||| |||||||    
T  16125469 tcaaaatcaatggattttgcctattttaagattttactatggatttaggtcgttgaaggtgaaaaagaaagtcgcaaaatcctgaattttaggatttaag 16125568  T
Q  198 tcgggattttga 209  Q
    || |||||||||    
T  16125569 tcaggattttga 16125580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 21846188 - 21846398
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    |||| ||||||||||||| ||||| | ||||||||||||||||||||||||  |||||||| |||||||||   |||||| | ||||   |||||| |||    
T  21846188 aaatagatgaattttacccaaaaaaattaatactaaatatatgttataaattatatatagttataaatgac---gtttatgaaaaat---aaaatcgcaa 21846281  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||||||   ||||||||| |||||| |||||||||||||||||| |||||| |||    
T  21846282 tcaaaatcgatggattttttctattttgagattctactatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctggattttaggatttaactcg 21846381  T
Q  201 ggattttgacaacaatg 217  Q
    |||||||||||||||||    
T  21846382 ggattttgacaacaatg 21846398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 39 - 214
Target Start/End: Original strand, 19009898 - 19010073
Alignment:
Q  39 atatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctact 138  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||   |||||||| ||| ||||    
T  19009898 atatgttataaatggtatatagttataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttagaattttact 19009997  T
Q  139 atggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaaca 214  Q
    |||||||| |||||  ||||||||| |||||| |||||||||| ||||||| ||||||||| ||||||||||||||    
T  19009998 atggatttaagtcattgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 17869664 - 17869873
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| || ||||| ||||||||||| |||||||||||||||  |||    
T  17869664 aaatcgatgaattttaccaaaaaataataatactaaatatatgttgtaaatagtatatggttataaaagacttagtttaaaagaaatcgtaaaattgcaa 17869763  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| || | |||||  |||||||||||||||||| |||||||  |||   |||||||||||||||| ||||||||     ||||  |||||||||     
T  17869764 tcaaaatcgaagaattttgcctattttaggattctactgtggatttaggtcgtcgaaggtgaagaaagtcgcaaaatcc-----tttaagatttaagtca 17869858  T
Q  201 ggattttgacaacaa 215  Q
    |||||||||||||||    
T  17869859 ggattttgacaacaa 17869873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 23 - 216
Target Start/End: Original strand, 9128776 - 9128969
Alignment:
Q  23 aataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttct 122  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||| |||||||||| |||| ||||| |||    
T  9128776 aataataatactaaagatatgttataaatggtatatagtcaaaaataacttagtttataagaaatcgtcaaatcgcaatcaaaatcgatgaattttgtct 9128875  T
Q  123 attttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 216  Q
    |||||| |||||||||||  |||||||||    || |||||||||||| ||| |||||   |||||| |||||||||| |||||| ||||||||    
T  9128876 attttaagattctactataaatttgagtcgttaaatgtgaagaaagtcgcaagatcctaatttttaggatttaagtcgtgattttaacaacaat 9128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 47786073 - 47785958
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  47786073 aaatcgatggattttaccacaaaa-aataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaattgcaa 47785975  T
Q  101 tcaaaattgatggattt 117  Q
    ||||||  |||||||||    
T  47785974 tcaaaaccgatggattt 47785958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 18228380 - 18228278
Alignment:
Q  36 aatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattct 135  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||  ||||||| |||||||    
T  18228380 aatatatgttataaatggtatatagtcataaataacttaatttataagaaatcataaaatc-caatcaaaattgatggattttgcctattttgggattct 18228282  T
Q  136 acta 139  Q
    ||||    
T  18228281 acta 18228278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 32881514 - 32881415
Alignment:
Q  29 aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctatttta 128  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||| |||| |||||  ||||||||    
T  32881514 aatactaaatatatgttataaatggtatatagtcatgaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttta 32881415  T

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Target: chr1; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 41032661 - 41032800
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaat 177  Q
    |||||||||| |||||||| |||| ||||| ||||||||||  ||||||||| |||||||||||||||||||||   ||||||||||||| || ||||||    
T  41032661 tataagaaattgtaaaatcgcaattaaaatcgatggattttgcctattttagaattctactatggatttgagtcgttgaaggtgaagaaaatcgcaaaat 41032760  T
Q  178 cctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||| ||| ||  |||||||||| ||||||||||||||||    
T  41032761 cctgaattctacgatttaagtcgagattttgacaacaatg 41032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 83 - 217
Target Start/End: Original strand, 17055995 - 17056129
Alignment:
Q  83 gaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctgg 182  Q
    |||||||||||||| |||||||||| ||||||||||   |||||||  |||||||||||||| ||||||   ||||||| ||||| |  |||||||||||    
T  17055995 gaaatcgtaaaatcgcaatcaaaatcgatggattttacttattttaaaattctactatggatctgagtcgttgaaggtggagaaaattgcaaaatcctgg 17056094  T
Q  183 attttagtatttaagtcgggattttgacaacaatg 217  Q
    ||||||| |||||| || |||||||||| ||||||    
T  17056095 attttaggatttaaatcaggattttgactacaatg 17056129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 30619150 - 30619075
Alignment:
Q  141 ggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 216  Q
    |||||||||||   ||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||    
T  30619150 ggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaacaat 30619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 216
Target Start/End: Original strand, 14074404 - 14074499
Alignment:
Q  121 ctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 216  Q
    |||||||| ||||||||| ||||||||||||   |||  ||||||||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  14074404 ctattttaagattctactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagacgggattttgacaacaat 14074499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 18337547 - 18337651
Alignment:
Q  112 ggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgaca 211  Q
    |||||||  ||||||| || |||| |||||||||||||||   ||||||||| |||||  ||||||||||||||||||  | ||||||||||||||||||    
T  18337547 ggattttgcctattttggggttctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggattttag-gtataagtcgggattttgaca 18337645  T
Q  212 acaatg 217  Q
    ||||||    
T  18337646 acaatg 18337651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 34478838 - 34478900
Alignment:
Q  155 gaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||||||||||||||||||||||   ||||||  ||||||||||||||||| |||||||||    
T  34478838 gaaggtgaagaaagtcacaaaatcccaaattttaagatttaagtcgggattttaacaacaatg 34478900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 12002811 - 12002859
Alignment:
Q  26 aataatactaaatatatgttataaatggtatatagtcataaatgactta 74  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  12002811 aataatgctaaatatatgttataaattgcatatagtcataaatgactta 12002859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 12800622 - 12800710
Alignment:
Q  128 aggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 216  Q
    |||||| |||||| ||||||||||   ||| ||||||||||||  ||||||||  ||||||| |||||||| |||||||| ||||||||    
T  12800622 aggattttactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaacaat 12800710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 27917286 - 27917363
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 79  Q
    ||||||||||||||||| || | | |||||| | |||||||| |||||||| |||||||||||||||| ||| ||||||    
T  27917286 aaatcgatgaattttacaaacata-aataatgcaaaatatatattataaatcgtatatagtcataaataactcagttta 27917363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 16446699 - 16446750
Alignment:
Q  27 ataatactaaatatatgttataaatggtatatagtcataaatgacttagttt 78  Q
    ||||||||||||||||||||||||| | ||||| ||||| |||||| |||||    
T  16446699 ataatactaaatatatgttataaattgcatataatcatatatgactcagttt 16446750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 27917520 - 27917578
Alignment:
Q  155 gaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaac 213  Q
    |||||| || ||| || ||||||||| ||||| || |||||||||||||||||||||||    
T  27917520 gaaggtaaataaaatcgcaaaatcctagatttcagaatttaagtcgggattttgacaac 27917578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 47785836 - 47785791
Alignment:
Q  172 caaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||||||| ||||||| ||||| || ||||||||||||||||||    
T  47785836 caaaatcctgaattttaggatttatgttgggattttgacaacaatg 47785791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 12003241 - 12003289
Alignment:
Q  165 aaagtcacaaaatcctggattttagtatttaagtcgggattttgacaac 213  Q
    |||||||||||| |||| ||||||  | |||||||||||||||||||||    
T  12003241 aaagtcacaaaaacctgaattttaaaacttaagtcgggattttgacaac 12003289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 13100431 - 13100391
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  13100431 tataagaaatcttaaaatcgcaatcaaaatcgatggatttt 13100391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 143; Significance: 4e-75; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 13 - 216
Target Start/End: Original strand, 44944771 - 44944978
Alignment:
Q  13 tttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatg 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  44944771 tttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatagtaaaatcccaatcaaaatcgatg 44944870  T
Q  113 gattttttctattttaggattctactatggatttgagtcagggaag----gtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttg 208  Q
    ||||||  |||||||||||||||||||||||||||| ||   ||||    |||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  44944871 gattttgactattttaggattctactatggatttgaatcgttgaaggtgagtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttg 44944970  T
Q  209 acaacaat 216  Q
    ||||||||    
T  44944971 acaacaat 44944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 5058744 - 5058530
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  5058744 aaatcgatggactttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaa 5058645  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| |  |||||||  |||||||| |||||||||||||||||  |||   ||||||||||||| || |||||| ||| ||||||| ||||||||||    
T  5058644 tcaaaatcgtaggattttgcctattttaagattctactatggatttaggtcgttgaaggtgaagaaaatcgcaaaattctgaattttaggatttaagtcg 5058545  T
Q  201 ggattttgacaacaa 215  Q
    |||||||||||||||    
T  5058544 ggattttgacaacaa 5058530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 24725386 - 24725607
Alignment:
Q  1 aaatcgatgaattttacc---aaaaaataa--taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaat 95  Q
    ||||||||| ||||||||   |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24725386 aaatcgatggattttacccaaaaaaaataaaataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtcaaat 24725485  T
Q  96 ctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtattta 195  Q
    |  ||||||||||||||||||||  |||||||  |||||||||||||||||||||    ||||||||||||||||  |||||| |||||||||| |||||    
T  24725486 cgtaatcaaaattgatggattttgcctattttgcgattctactatggatttgagttgttgaaggtgaagaaagtcgtaaaatcttggattttaggattta 24725585  T
Q  196 agtcgggattttgacaacaatg 217  Q
    |||| |||||||||||||||||    
T  24725586 agtctggattttgacaacaatg 24725607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 4247571 - 4247356
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||| |||    
T  4247571 aaatcgatggattttacctaaaaaaaataatactaaatatatgttacaaatgatatatagtcataaatgacttagtttataagaaatcataaaatcgcaa 4247472  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| |||| |||||  ||||||| |||||||||||||||||| |||    ||| ||||||||||| ||||||||||| ||||||| |||||| | |    
T  4247471 tcaaaatcgatgaattttgcctattttgggattctactatggatttaagttgttgaaagtgaagaaagttacaaaatcctgaattttaggatttaaattg 4247372  T
Q  201 ggattttgacaacaat 216  Q
    ||||||||||||||||    
T  4247371 ggattttgacaacaat 4247356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 8346446 - 8346660
Alignment:
Q  2 aatcgatgaattttaccaaaaaa-taataatactaaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatctca 99  Q
    |||| ||| |||||||||||||| |||||||||||||||||||||||||| || ||||||| |||| |||||||||||||||||||||||||||||| ||    
T  8346446 aatcaatggattttaccaaaaaaataataatactaaatatatgttataaaatgatatatagacatagatgacttagtttataagaaatcgtaaaatcgca 8346545  T
Q  100 atcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtc 199  Q
    || ||||| ||||||||||| ||||||| |||||||||||||||||||||||   |||||||||||||||| |||||||||  |||||| |||||| |||    
T  8346546 attaaaatcgatggatttttcctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaatatttaggtc 8346645  T
Q  200 gggattttgacaaca 214  Q
     ||||||||||||||    
T  8346646 aggattttgacaaca 8346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 28 - 216
Target Start/End: Original strand, 24990012 - 24990200
Alignment:
Q  28 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctatttt 127  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||| ||||||||||  |||||||    
T  24990012 taatactaaatatatgttataaatagtatatagtcataaatgatttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctatttt 24990111  T
Q  128 aggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 216  Q
    ||||||||||||||||||||||||   | |||| |||||||||||||||||||  ||||| | ||||||||||| ||||||||||||||    
T  24990112 aggattctactatggatttgagtcgttggaggtaaagaaagtcacaaaatcctaaatttttggatttaagtcggaattttgacaacaat 24990200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 27 - 217
Target Start/End: Complemental strand, 14055440 - 14055250
Alignment:
Q  27 ataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattt 126  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  |||||||||  ||||||    
T  14055440 ataatattaaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctattt 14055341  T
Q  127 taggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    ||| |||||||||| ||||||||||   |||||||||||||||| ||||||| |||||||||| || ||||| |||||||| |||||||||    
T  14055340 tagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaatg 14055250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 27 - 217
Target Start/End: Complemental strand, 14365468 - 14365278
Alignment:
Q  27 ataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattt 126  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  |||||||||  ||||||    
T  14365468 ataatattaaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctattt 14365369  T
Q  127 taggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    ||| |||||||||| ||||||||||   |||||||||||||||| ||||||| |||||||||| || ||||| |||||||| |||||||||    
T  14365368 tagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaatg 14365278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 8343731 - 8343932
Alignment:
Q  19 aaaaaataataatactaaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattt 117  Q
    |||||||||||||||||||||||  ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  8343731 aaaaaataataatactaaatataacttataaaatggtatataatcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaattgatggattt 8343830  T
Q  118 tttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    ||  |||||| |||||||||||||||||||||||   |||||||||||||||| |||||||| ||||||||| ||||| | |  ||||||||||||||||    
T  8343831 ttcatattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatccaggattttaggatttaggccaagattttgacaacaatg 8343930  T
Q  218 gt 219  Q
    ||    
T  8343931 gt 8343932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 27221602 - 27221417
Alignment:
Q  32 actaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttagga 131  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  | |||||| ||    
T  27221602 actatatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaaga 27221503  T
Q  132 ttctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||||||| |||||||||   |||| ||||||||||| |||||||||| ||||||| |||||||| |||||||| |||||||||    
T  27221502 ttctactatgtatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttaacaacaatg 27221417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 20570799 - 20571002
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||    
T  20570799 aaatcgatggactttaccaaaaaagaataatactaaatatatgttataaatggtatatagtcataaatgacttattttataagaaatcgtaaaattgcaa 20570898  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| |||||||||| ||||||||  ||||||||||| |||||       || || ||||||||||||||||||| ||||||| || ||||||||||    
T  20570899 tcaaaatcgatggattttgtctatttttagattctactatagattt------aggtagatgaagaaagtcacaaaatcttggatttcagaatttaagtcg 20570992  T
Q  201 ggattttgac 210  Q
    ||| ||||||    
T  20570993 ggagtttgac 20571002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 8329958 - 8330175
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatctca 99  Q
    ||||| ||| |||||||||||||| |  |||| ||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  8329958 aaatcaatggattttaccaaaaaaaataaataataagtatatgttataaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgca 8330057  T
Q  100 atcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtc 199  Q
    || |||||  ||| |||||| ||||||| |||||||||||||||||||| ||   |||||||||||||||| ||||||| || ||||||| ||||| |||    
T  8330058 attaaaatcaatgaatttttcctattttgggattctactatggatttgaatcgttgaaggtgaagaaagtcgcaaaatcatgaattttagaatttaggtc 8330157  T
Q  200 gggattttgacaacaatg 217  Q
     |||||||||||||||||    
T  8330158 aggattttgacaacaatg 8330175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 17811563 - 17811385
Alignment:
Q  1 aaatcgatgaattttacc-aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctca 99  Q
    ||||||||| |||||||| |||||||| ||||| ||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||| ||    
T  17811563 aaatcgatggattttacccaaaaaatattaatattaaatatattttataaatggtatataattataaatgacttagtttataagaaatcgtaaaatcgca 17811464  T
Q  100 atcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatc 178  Q
    |||||||| ||| |||||| |||||||||  |||||||||||||||||||||   ||||||||| ||||||||||||||    
T  17811463 atcaaaatcgatcgattttgtctattttaaaattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatc 17811385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 26281256 - 26281441
Alignment:
Q  33 ctaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggat 132  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||   |||||| | ||    
T  26281256 ctaaatataagttataaatggtatatagtcataaatgacttagtttataagaaatcgttaaatcgcaa-caaaatcgatggattttgcttattttggaat 26281354  T
Q  133 tctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 219  Q
    ||||| |||||||||||||   |||||||||||||||| |||||||||| ||||||  ||||||||||| |||||||||||||||||    
T  26281355 tctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaatggt 26281441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 5715500 - 5715290
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    |||||||||||||||||||||||| || |    | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  5715500 aaatcgatgaattttaccaaaaaaaaaaa----tgaatatatgttataaatggtatataatcataaatgacttagtttataagaaatcgtaaaatcacaa 5715405  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| |||| |||||   |||||| | ||||||||||| |||| |||    ||||||| | |||||| |||||||||| ||||||| ||||||||||    
T  5715404 tcaaaatcgatgaattttgcttattttggaattctactatgaatttaagttgttgaaggtgta-aaagtcgcaaaatcctgaattttaggatttaagtcg 5715306  T
Q  201 ggattttgacaacaat 216  Q
    ||||||||||||||||    
T  5715305 ggattttgacaacaat 5715290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 11325194 - 11324988
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaat----ggtatatagtcataaatgacttagtttataagaaatcgtaaaatc 96  Q
    ||||||||| |||||||||||||| || || |||||||||  |||||||||    |||||||||||||||||||||||||||||||||||||||||| ||    
T  11325194 aaatcgatggattttaccaaaaaaaaaaaa-actaaatat--gttataaataattggtatatagtcataaatgacttagtttataagaaatcgtaaattc 11325098  T
Q  97 tcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaa 196  Q
     ||||||||||| ||| |||||  ||||||||| |||||| ||||||||||||||   ||||||||||||| || ||||||| || ||||||| ||||||    
T  11325097 gcaatcaaaatt-atgaattttgcctattttagaattctattatggatttgagtcgttgaaggtgaagaaaatcccaaaatcatgaattttaggatttaa 11324999  T
Q  197 gtcgggatttt 207  Q
    |||||||||||    
T  11324998 gtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 63 - 217
Target Start/End: Original strand, 7730319 - 7730472
Alignment:
Q  63 ataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtga 162  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||| |||||||||||     |||||||    
T  7730319 ataaatgatttagtttataagaaatcgtaaaatctcaatcaaaatcgatggatttttcctattttggaattctactgtggatttgagttgttaaaggtga 7730418  T
Q  163 agaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||||| ||||| |||||||||||| ||||||||| |||||||||||||||||    
T  7730419 agaaagtcgcaaaa-cctggattttaggatttaagtcaggattttgacaacaatg 7730472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 63 - 217
Target Start/End: Original strand, 9685220 - 9685374
Alignment:
Q  63 ataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtga 162  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||| |||||||||| ||||||||   |||||| ||||||||||||||   ||||||||    
T  9685220 ataaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtga 9685319  T
Q  163 agaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    | |||||| |||||||||  ||||||| || ||||||| ||||||||||||||||    
T  9685320 aaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaatg 9685374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 22687631 - 22687793
Alignment:
Q  54 tatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcag 153  Q
    ||||||||||| || |  ||||||| ||||||||||||||||| |||||||||| ||||||||||  ||||||| ||||||| | ||||||||||||       
T  22687631 tatatagtcatcaaggttttagtttgtaagaaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttgggattctgcgatggatttgagttgt 22687730  T
Q  154 ggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 216  Q
     |||| ||||||||||| |||| ||||| ||||||| ||||||||||||||||||||||||||    
T  22687731 tgaagttgaagaaagtcgcaaattcctgaattttaggatttaagtcgggattttgacaacaat 22687793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 6916994 - 6916786
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    |||||||||||||||||||| ||| ||  ||| |||||||||||||||| ||| ||| |||||||||||||||| ||||||||||||||||||||| |||    
T  6916994 aaatcgatgaattttaccaacaaaaaaatatattaaatatatgttataactggaata-agtcataaatgacttaatttataagaaatcgtaaaatcgcaa 6916896  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||  ||||||||||  |  |||||| ||||||||||| ||||||||||||  |    || ||| || |||||||||  |||| |  |||||| |||    
T  6916895 tcaaaaccgatggattttaac--ttttagaattctactatgaatttgagtcaggtga----aaaaaaatcgcaaaatcctaaatttcaagatttaaatcg 6916802  T
Q  201 ggattttgacaacaat 216  Q
    ||||||||||||||||    
T  6916801 ggattttgacaacaat 6916786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 92 - 209
Target Start/End: Complemental strand, 8571367 - 8571250
Alignment:
Q  92 aaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagta 191  Q
    ||||| |||||||||| ||||| |||| ||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||||||||||||  |    
T  8571367 aaatcgcaatcaaaatcgatggtttttctctattttaggattctactatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctggattttatga 8571268  T
Q  192 tttaagtcgggattttga 209  Q
    ||||||||||||||||||    
T  8571267 tttaagtcgggattttga 8571250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 78 - 216
Target Start/End: Complemental strand, 11326524 - 11326386
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaat 177  Q
    |||| ||||| |||||||| |||||||||| ||| ||||||  |||||||| ||||||||||||||||| ||||   |||||||||||||||| ||||||    
T  11326524 tataggaaattgtaaaatcgcaatcaaaatcgatagattttgcctattttaagattctactatggattttagtcgctgaaggtgaagaaagtcgcaaaat 11326425  T
Q  178 cctggattttagtatttaagtcgggattttgacaacaat 216  Q
    |||  ||||||| |||||||| |||||||||||||||||    
T  11326424 cctaaattttaggatttaagttgggattttgacaacaat 11326386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 39182397 - 39182259
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaat 177  Q
    |||||||||| |||||||| ||| |||||| ||||||||||  ||||||| |||||||||||||||||| ||||   |||||||||| ||||| ||||||    
T  39182397 tataagaaattgtaaaatcgcaaccaaaatcgatggattttgcctattttgggattctactatggatttcagtcgttgaaggtgaag-aagtcgcaaaat 39182299  T
Q  178 cctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    ||| |||||||| ||||||||| |||||||| ||||||||    
T  39182298 cctagattttaggatttaagtcaggattttgtcaacaatg 39182259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 26617391 - 26617608
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||  ||||||| |||||| |||||||||||||||||||||||||||    |||||||||||||||||||| || ||||  |||||||||| |||    
T  26617391 aaatcgattgattttacaaaaaaa-aataatactaaatatatgttataaatg----atagtcataaatgacttagtctacaagatctcgtaaaatcgcaa 26617485  T
Q  101 tcaaaattgatggatttt--ttctattttaggattctac--tatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaa 196  Q
    ||||||| ||| ||||||   | |||||||| |||||||  |||| ||||  |||   ||||||||| |||||| |||||||||| ||||||| ||| ||    
T  26617486 tcaaaatcgatagattttgcctatattttagaattctactatatgaatttatgtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggattaaa 26617585  T
Q  197 gtcgggattttgacaacaatggt 219  Q
    ||| | ||||| | |||||||||    
T  26617586 gtcagaattttcaaaacaatggt 26617608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 27509914 - 27510052
Alignment:
Q  58 tagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||  |||||||   |||||||||| ||||||| ||   | |    
T  27509914 tagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatgaattttgcctatttttaaattctactatagatttgaatcgttgga 27510013  T
Q  158 ggtgaagaaagtcacaaaatcctggattttagtatttaa 196  Q
     ||||||||| || |||||||||  ||||||| ||||||    
T  27510014 tgtgaagaaaatcgcaaaatcctttattttagaatttaa 27510052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 21846437 - 21846554
Alignment:
Q  98 caatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaag 197  Q
    |||||||||| ||| ||||||  || |||||| |||||||||||||| ||||||   ||| ||||| |||||| |||||||||| ||||||| |||||||    
T  21846437 caatcaaaatcgattgattttacctgttttagaattctactatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaattttagaatttaag 21846535  T
Q  198 tcgggattttgacaacaat 216  Q
    |||||||||||||||||||    
T  21846536 tcgggattttgacaacaat 21846554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 30294251 - 30294175
Alignment:
Q  137 ctatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 216  Q
    |||||||||||||||   ||||||||| ||| ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  30294251 ctatggatttgagtc---gaaggtgaataaaatcacaaaatcctggattttaggatttaagttgggattttgacaacaat 30294175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 1977790 - 1977717
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtc 151  Q
    ||||||||||| ||||||| |||||||||| || | |||||   ||||||||||||||||||||||||||||||    
T  1977790 tataagaaatcctaaaatcgcaatcaaaatcgacgaattttgcatattttaggattctactatggatttgagtc 1977717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21846361 - 21846433
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgactta 74  Q
    |||| |||| |||||||| ||| | ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  21846361 aaattgatggattttacccaaata-aataatattaaatatatgttataaatgatatatagtcataaatgactta 21846433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 21846335 - 21846375
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  21846335 tataagaaatcgtaaaatcacaatcaaaattgatggatttt 21846375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 27509336 - 27509379
Alignment:
Q  11 attttaccaaaaaataataatactaaatatatgttataaatggta 55  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  27509336 attttaccaaaaaa-aataatactaaatatatgttataaatggta 27509379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 1981275 - 1981321
Alignment:
Q  26 aataatactaaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||    
T  1981275 aataatgctaaatatatgttataaattgcatatagtcataaatgact 1981321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 7730247 - 7730287
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  7730247 tataagaaattgtaaaatcgcaatcaaaattgatggatttt 7730287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 17809067 - 17809119
Alignment:
Q  26 aataatactaaatatatgttataaatggtatatagtcataaatgacttagttt 78  Q
    |||||| ||||||||||||||||||| | ||||| |||||||||||| |||||    
T  17809067 aataatgctaaatatatgttataaattgcatataatcataaatgactcagttt 17809119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 21157625 - 21157669
Alignment:
Q  28 taatactaaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||| ||||||||||||||||||||||||||| || |||||||||    
T  21157625 taatgctaaatatatgttataaatggtatataatcgtaaatgact 21157669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 26565497 - 26565540
Alignment:
Q  36 aatatatgttataaatggtatatagtcataaatgacttagttta 79  Q
    |||||||||||||||  |||||||||||||||||||| ||||||    
T  26565497 aatatatgttataaactgtatatagtcataaatgactcagttta 26565540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 118
Target Start/End: Original strand, 21157522 - 21157556
Alignment:
Q  84 aaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||||||||||||||||||||||||| |||||||    
T  21157522 aaatcgtaaaatctcaatcaaaattgaaggatttt 21157556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 25842691 - 25842729
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  25842691 taaatatatgttataaattgcatatagtcataaatgact 25842729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 4247597 - 4247557
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  4247597 tataagaaatcataaaatcgcaatcaaaatcgatggatttt 4247557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 17809441 - 17809493
Alignment:
Q  155 gaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggatttt 207  Q
    ||||||||  ||||||||||||||||| ||||| | |||||||||| ||||||    
T  17809441 gaaggtgagtaaagtcacaaaatcctgaattttgggatttaagtcgcgatttt 17809493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 26565436 - 26565476
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||| ||||||||||||  |||||||||||||||||||||    
T  26565436 tataaaaaatcgtaaaattgcaatcaaaattgatggatttt 26565476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 43235083 - 43234868
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||  |||||||||||| ||||||||| ||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||| |||    
T  43235083 aaatcgattgattttaccaaaagataataatagtaagtatatgttataaatggtttatagacataaatgacttagttgataagaaatcgtaaaatcacaa 43234984  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| ||||   |||||||||||||||| |||||||||| ||||||| |||||||| |    
T  43234983 tcaaaatcgatggatttttcctattttaggattctactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagttg 43234884  T
Q  201 ggattttgacaacaat 216  Q
    ||||||||||||||||    
T  43234883 ggattttgacaacaat 43234868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 18051447 - 18051660
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||| |||| |||    
T  18051447 aaatcgatggatttaaccaaaaaataataatactaaatatatgttataaat--tatat-gtcataaatgacttagtttataagaaatcgtacaatcgcaa 18051543  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| ||||||||||  ||||||||| |||||||||| ||||||||||   |||| ||||||||||| |||||||||  ||||||| ||||||||||    
T  18051544 tcaaaatcgatggattttgcctattttagaattctactatagatttgagtcgttgaagttgaagaaagtcgcaaaatcctatattttaggatttaagtcg 18051643  T
Q  201 ggattttgacaacaatg 217  Q
    |||||||||||||||||    
T  18051644 ggattttgacaacaatg 18051660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 18843930 - 18843716
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||  |||    
T  18843930 aaatcgatggattttacccaaaaaaattaatactaaatatatgttataaatggtatataatcataaatgacttagtttataagaaatcgtataattgcaa 18843831  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| |||| ||||| |||||||| ||||||||| |||||||||||||   |||||||||||||||| |||||||||| ||| ||| ||||||||||    
T  18843830 tcaaaatcgatgaattttgtctattttgggattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattataggatttaagtcg 18843731  T
Q  201 ggattttgacaacaa 215  Q
    | ||||| |||||||    
T  18843730 gaattttaacaacaa 18843716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 19579158 - 19578941
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataa-taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctca 99  Q
    ||||||||| |||||||||||||| || |||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| || ||    
T  19579158 aaatcgatggattttaccaaaaaaaaaataataccaaatatatgttatgaatggtaaatagtcataaatgacttagtttataagaaatcgtaaagtcgca 19579059  T
Q  100 atcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtc 199  Q
    |||||||| ||||||||||   |||||| |||||||||||||||||| ||||   ||||||||||||| || |||||||||||||||||  ||||||||     
T  19579058 atcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctggattttatgatttaagtt 19578959  T
Q  200 gggattttgacaacaatg 217  Q
    || |||||||||||||||    
T  19578958 ggaattttgacaacaatg 19578941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 21059071 - 21059287
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| ||||||| | |||| || |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||    
T  21059071 aaatcgatggattttacaacaaaaaaa-aatactaaatatatgttataaatggtttatagtcataaatgacttcgtttataagaaatcgtaaaatcgcaa 21059169  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| |||| |||||  ||||||  ||||||||| |||||||||||||   ||| |||||||||||| ||||||||| |||||||| |||||| |||    
T  21059170 tcaaaatcgatgaattttgcctatttagggattctac-atggatttgagtcgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaaatcg 21059268  T
Q  201 ggattttgacaacaatggt 219  Q
    |||||||||||||||||||    
T  21059269 ggattttgacaacaatggt 21059287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 23172342 - 23172560
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    |||||||||||||||||| ||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| | |    
T  23172342 aaatcgatgaattttacccaaaaaaattaatattaaatatatgttacaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcga 23172441  T
Q  101 tcaaa----attgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaa 196  Q
    |||||    || |||| ||||| |||||||| |||||||||||||||||| ||||   |||| ||||||||||| |||||||||  ||||||| ||||||    
T  23172442 tcaaaatcgatcgatgaattttgtctattttgggattctactatggatttaagtcgttgaagatgaagaaagtcgcaaaatcctaaattttaggatttaa 23172541  T
Q  197 gtcgggattttgacaacaa 215  Q
    |||||||||||||||||||    
T  23172542 gtcgggattttgacaacaa 23172560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 22645635 - 22645850
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataat-aatactaaatatatgttataaatggtatatagtcataaatgac-ttagtttataagaaatcgtaaaatctc 98  Q
    |||||||||||||||||||||||| ||  || |||||| |||||||||    |||||||||||||||||||| |||||||||||||||| |||||||| |    
T  22645635 aaatcgatgaattttaccaaaaaaaaaacaagactaaacatatgttat----ggtatatagtcataaatgacattagtttataagaaattgtaaaatcgc 22645730  T
Q  99 aatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagt 198  Q
    ||||||||| |||||| |||   |||||| ||||| |||||||||||| | ||   |||||||||||||||| |||||| ||||||||||| ||||||||    
T  22645731 aatcaaaatagatggaatttacttattttgggattttactatggatttaaatcgttgaaggtgaagaaagtcgcaaaatactggattttaggatttaagt 22645830  T
Q  199 cgggattttgacaacaatgg 218  Q
    ||||||||||||||||||||    
T  22645831 cgggattttgacaacaatgg 22645850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 41688580 - 41688782
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||| |||    
T  41688580 aaatcgatgaattttaccaaaaaa-aataatactaaatatatgttatgaatggtatatagttataaatgatttagtttataagaaatcgtaaaatcgcaa 41688678  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    ||||||| |||| |||||   |||||||| ||| ||||||  |||| ||||   ||||||||||||| |  |||||||| | ||||||| |||||||| |    
T  41688679 tcaaaatcgatgaattttgcttattttagaattttactataaatttaagtcgttgaaggtgaagaaaattgcaaaatcc-gaattttaggatttaagttg 41688777  T
Q  201 ggatt 205  Q
    |||||    
T  41688778 ggatt 41688782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 23 - 208
Target Start/End: Original strand, 27340126 - 27340307
Alignment:
Q  23 aataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttct 122  Q
    |||||||||||||||||||||||| ||||||||||||||    ||||||||||||||||||||||  |||||||||||||||||| |||| |||||  ||    
T  27340126 aataataatactaaatatatgttacaaatggtatatagt----aatgacttagtttataagaaatattaaaatctcaatcaaaatcgatgaattttgcct 27340221  T
Q  123 attttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttg 208  Q
    |||||| ||||||||||| ||||||||||   |||| ||||||||||| ||||||| |  ||||||  ||||||||||||||||||    
T  27340222 attttaagattctactatagatttgagtcgttgaagatgaagaaagtcgcaaaatcataaattttatgatttaagtcgggattttg 27340307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 38158178 - 38158383
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||||         ||||||||||||| ||||||||||||||||||||||||  |||    
T  38158178 aaattgatggattttaccaaaaaa-aataatactaaatatatgttata---------tagtcataaatgatttagtttataagaaatcgtaaaataacaa 38158267  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
     ||||||  ||||||||| |||||||| |||||||||| |||||||||||    ||| || ||||||||| ||||||||| |||||||| ||||||||||    
T  38158268 ccaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtcaagaaagtcgcaaaatcctagattttaggatttaagtcg 38158367  T
Q  201 ggattttgacaacaat 216  Q
    | ||||||||||||||    
T  38158368 gaattttgacaacaat 38158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 23 - 151
Target Start/End: Complemental strand, 19979792 - 19979664
Alignment:
Q  23 aataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttct 122  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||   |    
T  19979792 aataataataataaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatccatggattttgcgt 19979693  T
Q  123 attttaggattctactatggatttgagtc 151  Q
     |||| ||||||||| ||| |||||||||    
T  19979692 gttttgggattctaccatgaatttgagtc 19979664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 20321158 - 20320992
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataat-aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctca 99  Q
    ||||||||| |||||||| | ||| ||| |||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||| ||    
T  20321158 aaatcgatggattttacccagaaaaaattaatattaaatatatgttataaatgatatatggtcataaatgacttagtttataag-aatcgtaaaatcgca 20321060  T
Q  100 atcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaa 167  Q
    |||||| |||||| ||||| |||||||| | ||| |||||||||||| |||||  |||||||||||||    
T  20321059 atcaaagttgatgaattttatctattttggaattttactatggattttagtcattgaaggtgaagaaa 20320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 20923843 - 20923718
Alignment:
Q  91 aaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagt 190  Q
    |||||| |||||||||| |||||| |||  ||||||||||||||||||||||||||  |||   |||||||||||||||| |||||| |||||||||||     
T  20923843 aaaatcgcaatcaaaatcgatggactttgcctattttaggattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttagg 20923744  T
Q  191 atttaagtcgggattttgacaacaat 216  Q
    ||||||||||||||||||||||||||    
T  20923743 atttaagtcgggattttgacaacaat 20923718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 26021532 - 26021464
Alignment:
Q  5 cgatgaattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatgact 72  Q
    ||||| |||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  26021532 cgatgcattttaccaaaacaataataatgctaaatatatgttataaattgtatatagtcataaatgact 26021464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 19042444 - 19042516
Alignment:
Q  142 gatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaaca 214  Q
    ||||||||||   |||||||||||||||||||||||| |  ||||||| |||||||| |||||||||||||||    
T  19042444 gatttgagtcgttgaaggtgaagaaagtcacaaaatcttaaattttagaatttaagttgggattttgacaaca 19042516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19042341 - 19042448
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    |||| |||| |||||| | ||||| | ||||||||||||||||||| |||| |||||||||||         | |||||||||||||||||||||| |||    
T  19042341 aaattgatggattttatccaaaaagattaatactaaatatatgttagaaattgtatatagtca---------tcgtttataagaaatcgtaaaatcgcaa 19042431  T
Q  101 tcaaaattgatggattt 117  Q
    ||||||| ||| |||||    
T  19042432 tcaaaatcgatagattt 19042448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 24648232 - 24648160
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataa-taatactaaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||||| || ||||||| |||| |||| |||| |||||||||| |||||||| ||||||||||||||||||||    
T  24648232 aaatcggtggattttactaaaacataaataatgctaaatatatattataaattgtatatagtcataaatgact 24648160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 19377782 - 19377742
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatgactta 74  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  19377782 taaatatatgttataaattggatatagtcataaatgactta 19377742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 43005773 - 43005841
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaat 68  Q
    ||||||||| ||| |||||||| || |||||| ||||||||||||||||||| ||||| | ||||||||    
T  43005773 aaatcgatggattgtaccaaaacaaaaataatgctaaatatatgttataaattgtatacactcataaat 43005841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 22984753 - 22984799
Alignment:
Q  26 aataatactaaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||||| ||||||||||||||||||| | ||||||||||| ||||||    
T  22984753 aataatgctaaatatatgttataaattgcatatagtcatagatgact 22984799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 38158154 - 38158192
Alignment:
Q  80 taagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  38158154 taagaaattgtaaaatcacaatcaaaattgatggatttt 38158192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 41427588 - 41427548
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatgactta 74  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  41427588 taaatatatattataaattgcatatagtcataaatgactta 41427548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 8656 - 8442
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| ||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  8656 aaatcgatggattttaccaaaaaa--ataatactaaatatatggtataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaa 8559  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    |||||||  |||||||||   |||||| ||||||||| || ||||| ||||   |||||||||||||||| ||||||| |||||||||| |||||||| |    
T  8558 tcaaaatcaatggattttgcttattttgggattctacaatagatttaagtcgttgaaggtgaagaaagtcgcaaaatcgtggattttaggatttaagtag 8459  T
Q  201 ggattttgacaacaatg 217  Q
    |||||||||||||||||    
T  8458 ggattttgacaacaatg 8442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 9e-67; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 50 - 218
Target Start/End: Complemental strand, 29067450 - 29067282
Alignment:
Q  50 atggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgag 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  29067450 atggtatatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttgggattctactatggatttgag 29067351  T
Q  150 tcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatgg 218  Q
    ||   |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  29067350 tcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaatgg 29067282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 8156052 - 8156262
Alignment:
Q  11 attttaccaaaaa--ataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaatt 108  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||     
T  8156052 attttaccaaaaataataataatactaaatatatgttataaatggtatatagttataaataacttagtttataagaaatcgtaaaatcgcaatcaaaatc 8156151  T
Q  109 gatggattttttct-attttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggatttt 207  Q
    |||||||||| ||| ||||| ||||| ||||||||||||||||||  ||||||||| ||| ||  ||||| ||| ||||||| |||||||| ||||||||    
T  8156152 gatggattttgtctaattttgggattatactatggatttgagtcattgaaggtgaaaaaaatcgtaaaattctgaattttagaatttaagttgggatttt 8156251  T
Q  208 gacaacaatgg 218  Q
    |||||||||||    
T  8156252 gacaacaatgg 8156262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 39428118 - 39427905
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataat-aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctca 99  Q
    ||||||||| |||||||| ||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||    
T  39428118 aaatcgatggattttacccaaaaaaaattaatactaaatatatgttataagtagtatatagtcataaatgacttagtttataagaaatcgtaaaatcgca 39428019  T
Q  100 atcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtc 199  Q
    |||||||| |||||| ||| |||||||| |||||||||||| ||||||||||   ||| |||||||||||  |||||||| ||||||||  |||||| ||    
T  39428018 atcaaaatcgatggactttgtctattttgggattctactatcgatttgagtcgttgaacgtgaagaaagttgcaaaatccaggattttaaaatttaaatc 39427919  T
Q  200 gggattttgacaac 213  Q
    ||||||||||||||    
T  39427918 gggattttgacaac 39427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 28745991 - 28745769
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataa------gaaatcgtaaaa 94  Q
    ||||||||| |||||||| ||||| | ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||      ||||||||||||    
T  28745991 aaatcgatggattttacccaaaaaaattaatagtaaatatatgttataaatagtatatagtcataaatgacttagtttataattataagaaatcgtaaaa 28745892  T
Q  95 tctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtattt 194  Q
    || |||||||||| |||| ||||| ||||||||  |||||||||||| |||||||||   |||||||||||||||| |||||||||  ||||||| ||||    
T  28745891 tcgcaatcaaaatcgatgaattttgtctattttgagattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggattt 28745792  T
Q  195 aagtcgggattttgacaacaatg 217  Q
    || ||||||||||||||||||||    
T  28745791 aaatcgggattttgacaacaatg 28745769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 63 - 216
Target Start/End: Complemental strand, 20756192 - 20756039
Alignment:
Q  63 ataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtga 162  Q
    |||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||  |||||||| |||||||||||||||||||||||  ||||||||    
T  20756192 ataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgattgattttgcctattttaagattctactatggatttgagtcattgaaggtga 20756093  T
Q  163 agaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 216  Q
    ||||| || |||||||||| ||||||  ||||||||||||||||||||||||||    
T  20756092 agaaaatcgcaaaatcctgaattttataatttaagtcgggattttgacaacaat 20756039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 24620132 - 24620333
Alignment:
Q  19 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||  |||| ||||| |||| |||||    
T  24620132 aaaaaataaaaatactaaatatattttataaatggtatataatcataaatgacttagtttataagaaatcgtaaaattgcaattaaaatcgatgaatttt 24620231  T
Q  119 ttctattttaggattctactatggatttgagtcagggaaggtgaagaaa---gtcacaaaatcctggattttagtatttaagtcgggattttgacaacaa 215  Q
      |||||||  ||||||||| || |||||||||   |||||||||||||   ||| ||||||| |  ||||||| ||||||||||| |||||||||||||    
T  24620232 gcctattttgagattctactgtgaatttgagtcgttgaaggtgaagaaagtcgtcgcaaaatcttaaattttaggatttaagtcggaattttgacaacaa 24620331  T
Q  216 tg 217  Q
    ||    
T  24620332 tg 24620333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 42697063 - 42696920
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataa-tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctca 99  Q
    ||||||||| |||||||||||||| || || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42697063 aaatcgatggattttaccaaaaaaaaaaaaataccaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgca 42696964  T
Q  100 atcaaaattgatggattttttctattttaggattctactatgga 143  Q
    |||||||| |||| |||||  |||||||  ||||||||||||||    
T  42696963 atcaaaatcgatgaattttgcctattttgagattctactatgga 42696920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 17064483 - 17064326
Alignment:
Q  54 tatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcag 153  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| ||||| |||||||||| ||||||||||| ||| |||||      
T  17064483 tatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaataaaaatcgatgaattttgtctattttagaattctactatgaattggagtcgt 17064384  T
Q  154 ggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgaca 211  Q
     ||||||||| | | || |||||||||| ||||||  |||||||||||||||||||||    
T  17064383 tgaaggtgaacacaatcgcaaaatcctgaattttaagatttaagtcgggattttgaca 17064326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 21963646 - 21963438
Alignment:
Q  1 aaatcgatgaattttaccaaaaaa--taataatactaaatatatgttataaatggtatata--gtcataaatgacttagtttataagaaatcgtaaaatc 96  Q
    |||| |||| ||||||| ||||||  ||||||||||||||||| ||||||||| |||||||  |||||||||||||||||  ||||||||||| ||||||    
T  21963646 aaattgatggattttacaaaaaaaattaataatactaaatata-gttataaatagtatatatagtcataaatgacttagtaaataagaaatcg-aaaatc 21963549  T
Q  97 tcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaa 196  Q
     | |||||||| ||||||||||   |||||||||||| |||||||||||||||||    |||||||||||||||  |||||| || ||||||| ||||||    
T  21963548 gctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttaggatttaa 21963449  T
Q  197 gtcgggatttt 207  Q
    |||||||||||    
T  21963448 gtcgggatttt 21963438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 21986082 - 21985874
Alignment:
Q  1 aaatcgatgaattttaccaaaaaa--taataatactaaatatatgttataaatggtatata--gtcataaatgacttagtttataagaaatcgtaaaatc 96  Q
    |||| |||| ||||||| ||||||  ||||||||||||||||| ||||||||| |||||||  |||||||||||||||||  ||||||||||| ||||||    
T  21986082 aaattgatggattttacaaaaaaaattaataatactaaatata-gttataaatagtatatatagtcataaatgacttagtaaataagaaatcg-aaaatc 21985985  T
Q  97 tcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaa 196  Q
     | |||||||| ||||||||||   |||||||||||| |||||||||||||||||    |||||||||||||||  |||||| || ||||||| ||||||    
T  21985984 gctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttaggatttaa 21985885  T
Q  197 gtcgggatttt 207  Q
    |||||||||||    
T  21985884 gtcgggatttt 21985874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 22137492 - 22137278
Alignment:
Q  1 aaatcgatgaattttaccaaaaaat-aataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctca 99  Q
    |||| |||| ||||||| ||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||| |||||| ||    
T  22137492 aaattgatggattttacaaaaaaattaataatactaaatata-gttataaatagtatatagtcataaatgacttagtaaataagaaatcg-aaaatcgca 22137395  T
Q  100 atcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtc 199  Q
    || ||||| ||||||||||   |||||| ||||| ||||||||||||||| |    |||||||||||||||  || ||| || ||||||| |||||||||    
T  22137394 attaaaatcgatggattttgcatattttgggattttactatggatttgaggcgttcaaggtgaagaaagtcgtaacatcttgaattttaggatttaagtc 22137295  T
Q  200 gggattttgacaacaat 216  Q
     ||||||| | ||||||    
T  22137294 aggattttaaaaacaat 22137278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 60 - 215
Target Start/End: Original strand, 3449265 - 3449419
Alignment:
Q  60 gtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaagg 159  Q
    |||| |||||||||| ||||||||||||||||||||| |||| |||||  |||||||||  |||||||||||||||||||| ||||| || |   |||||    
T  3449265 gtcacaaatgacttactttataagaaatcgtaaaatcgcaataaaaatctatggattttgcctattttaggattctactatagattttag-cgttgaagg 3449363  T
Q  160 tgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaa 215  Q
    | ||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  3449364 taaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaa 3449419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 22355976 - 22356184
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||          ||||||||||||||||||||||||||||||| |||    
T  22355976 aaatcgatggattttaccaaaaaataataataataaatatatgttataaatggta----------aatgacttagtttataagaaatcgtaaaatcgcaa 22356065  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtg-aagaaagtcacaaaatcctggattttagtatttaagtc 199  Q
    |||||||| |||||||||   |||||||||||||||||||| |||  | |    |||| || || ||| ||  ||||||||| ||||||| |||||||||    
T  22356066 tcaaaattcatggattttgcttattttaggattctactatgaattcaaattgttgaagctgaaaaaaaatcttaaaatcctgaattttaggatttaagtc 22356165  T
Q  200 gggattttgacaacaatgg 218  Q
    || ||||||| ||||||||    
T  22356166 ggaattttgataacaatgg 22356184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 198
Target Start/End: Original strand, 22494731 - 22494892
Alignment:
Q  30 atactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttag 129  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||       ||||||||| |||||||||| |||| ||||| | ||||||||    
T  22494731 atactaaatatatgttataaatggtatatagtcataactgacttagtttat-------cgtaaaatcgcaatcaaaatcgatgaattttgtttattttag 22494823  T
Q  130 gattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagt 198  Q
    |||||||||||| |||| ||||   ||||||||| |||||| |||||||   |||||||| ||||||||    
T  22494824 gattctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaatctcagattttaggatttaagt 22494892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 15515172 - 15515265
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatc 96  Q
    ||||| ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15515172 aaatccatggattttaccaaaaaa--ataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtgaaatc 15515265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 24649684 - 24649818
Alignment:
Q  83 gaaatcgtaaaatctcaatcaaaattgatggattttt-tctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctg 181  Q
    |||||||||||||| || |||||||||||| |||||  | |||||| | |||||||||||||||||||||   |||||||||| |||||| ||||||||     
T  24649684 gaaatcgtaaaatcacagtcaaaattgatgaattttgctttattttggaattctactatggatttgagtcgttgaaggtgaagcaagtcaaaaaatccta 24649783  T
Q  182 gattttagtatttaagtcgggattttgacaacaat 216  Q
    |||||||  ||||||||||||||||||||||||||    
T  24649784 gattttacgatttaagtcgggattttgacaacaat 24649818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 90 - 216
Target Start/End: Original strand, 30727694 - 30727820
Alignment:
Q  90 taaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttag 189  Q
    ||||||| |||||||||| |||| ||||| |||||||| |||||||||||| ||||||||||   ||||||||||||||||  ||||| | ||||||||     
T  30727694 taaaatcgcaatcaaaatcgatgaattttgtctattttgggattctactatagatttgagtcgttgaaggtgaagaaagtcgtaaaattcaggattttaa 30727793  T
Q  190 tatttaagtcgggattttgacaacaat 216  Q
     ||||||||| ||||||||| ||||||    
T  30727794 gatttaagtcaggattttgataacaat 30727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 27676460 - 27676355
Alignment:
Q  112 ggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgaca 211  Q
    |||||||  ||||||| ||||||| ||||||||||||||||  ||||||||| |||||| |||||||||| ||||||  ||||||||| |||||||||||    
T  27676460 ggattttacctattttgggattctgctatggatttgagtcatagaaggtgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgaca 27676361  T
Q  212 acaatg 217  Q
    ||||||    
T  27676360 acaatg 27676355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 222
Target Start/End: Original strand, 25870350 - 25870511
Alignment:
Q  70 acttagtttataagaaatcgtaaaatctcaatcaaaatt-----gatggattttttctattttaggattctactatggatttgagtcagg----gaaggt 160  Q
    ||||| ||||||||||||||||||||| ||||||||||      ||||||||||  |||||||  | |||||||| | |||||||||       |||| |    
T  25870350 acttaatttataagaaatcgtaaaatcgcaatcaaaatcaaatcgatggattttgcctattttgaggttctactacgaatttgagtcgttcgttgaagat 25870449  T
Q  161 gaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggtgta 222  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||||    
T  25870450 gaagaaagtcacaaaatcttggattttaggatttaagtcgagattttgacaacaatgatgta 25870511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25870236 - 25870294
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatata 59  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25870236 aaatcgatggattttaccaaaaaacaataatactaaatatatgttataaatggtatata 25870294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 15806543 - 15806635
Alignment:
Q  124 ttttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||| ||||||| ||||||||||||||||  ||||||||| |||||| |||||| ||||||| ||| ||||||||| |||||||||||||||||    
T  15806543 ttttgggattctgctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaagtc-ggattttgacaacaatg 15806635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 17796364 - 17796267
Alignment:
Q  120 tctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||||||||||||| ||||| |||| |||    ||||||||| |||||||||||||||| |||||||  |||||||| || |||||||||| ||||    
T  17796364 tctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataatg 17796267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 17796473 - 17796376
Alignment:
Q  120 tctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||||||||||||| ||||| ||||||||    |||| |||| ||||||  |||||||| |||||||  ||||||||||| |||||||||||||||    
T  17796473 tctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaatg 17796376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 19104804 - 19104707
Alignment:
Q  120 tctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||||||||||||| ||||| |||| |||    ||||||||| |||||||||||||||| |||||||  |||||||| || |||||||||| ||||    
T  19104804 tctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataatg 19104707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 19104913 - 19104816
Alignment:
Q  120 tctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||||||||||||| ||||| ||||||||    |||| |||| ||||||  |||||||| |||||||  ||||||||||| |||||||||||||||    
T  19104913 tctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaatg 19104816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 10872971 - 10873065
Alignment:
Q  112 ggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattt 206  Q
    |||||||  |||||||  |||||| |||||||||||||||   ||||||||| ||  ||||||||||||||||||||| |||| | |||||||||    
T  10872971 ggattttgcctattttgagattctgctatggatttgagtcgttgaaggtgaataatatcacaaaatcctggattttaggatttcaatcgggattt 10873065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 28135801 - 28135723
Alignment:
Q  137 ctatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaa 215  Q
    ||||||||||||||||  ||| ||||| |||||| |||||||||| ||||||  |||||| |||| |||||||||||||    
T  28135801 ctatggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatcggaattttgacaacaa 28135723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9152898 - 9152984
Alignment:
Q  1 aaatcgatgaattttaccaaaaa-ataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatc 88  Q
    ||||||||  ||||||||||||| | ||||||| |||||||  | |||| ||| ||||||||||||||| |||||||||||||||||||    
T  9152898 aaatcgatagattttaccaaaaacacaataatattaaatat--gctatacatgatatatagtcataaataacttagtttataagaaatc 9152984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 20756237 - 20756186
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatg 52  Q
    ||||||||| |||||||| ||||  |||||||||||||||||||||||||||    
T  20756237 aaatcgatggattttacccaaaagaaataatactaaatatatgttataaatg 20756186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 17796582 - 17796485
Alignment:
Q  120 tctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||||||||||||| ||||| |||| |||    ||||||||| ||||||  |||||||| |||||||  |||||| |||  |||||||||||||||    
T  17796582 tctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaatg 17796485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 19105022 - 19104925
Alignment:
Q  120 tctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||||||||||||| ||||| |||| |||    ||||||||| ||||||  |||||||| |||||||  |||||| |||  |||||||||||||||    
T  19105022 tctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaatg 19104925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 6136457 - 6136497
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  6136457 tataagaaatcgtaaaatcacaatcaaaatcgatggatttt 6136497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 8592359 - 8592399
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatgactta 74  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  8592359 taaatatatgttataaattgcatatagtcataaatgactta 8592399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 27676651 - 27676579
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatgact 72  Q
    ||||| ||| |||||||||||| || || |||  ||||||||||||||||||  |||||||||||||||||||    
T  27676651 aaatcaatggattttaccaaaacaaaaacaatgttaaatatatgttataaattatatatagtcataaatgact 27676579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6861053 - 6861123
Alignment:
Q  1 aaatcgatgaattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatga 70  Q
    ||||||||| ||| |||||||| || |||||  |||| |||||||||||||| || |||||||||||||||    
T  6861053 aaatcgatggattctaccaaaacaaaaataaagctaactatatgttataaattgtctatagtcataaatga 6861123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 19348722 - 19348684
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  19348722 taaatatatgttataaattgcatatagtcataaatgact 19348684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17064522 - 17064481
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatat 42  Q
    ||||||||| |||||||||||||| || ||||||||||||||    
T  17064522 aaatcgatggattttaccaaaaaaaaaaaatactaaatatat 17064481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 3449198 - 3449238
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    |||||||||  |||||||| |||||||||||||||||||||    
T  3449198 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 3449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 9169842 - 9169806
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatga 70  Q
    |||||||||||||||||| | ||||||||||||||||    
T  9169842 taaatatatgttataaattgcatatagtcataaatga 9169806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 10872603 - 10872643
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    |||||||||||||||||||  ||| ||||||||||||||||    
T  10872603 tataagaaatcgtaaaatcagaataaaaattgatggatttt 10872643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 13286185 - 13286145
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||||||||||||||||| |||| ||||| ||||||||||    
T  13286185 tataagaaatcgtaaaatcacaatgaaaatcgatggatttt 13286145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 17796807 - 17796771
Alignment:
Q  79 ataagaaatcgtaaaatctcaatcaaaattgatggat 115  Q
    ||||||||||||||||||  |||||||||||||||||    
T  17796807 ataagaaatcgtaaaatcgaaatcaaaattgatggat 17796771  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 19105247 - 19105211
Alignment:
Q  79 ataagaaatcgtaaaatctcaatcaaaattgatggat 115  Q
    ||||||||||||||||||  |||||||||||||||||    
T  19105247 ataagaaatcgtaaaatcgaaatcaaaattgatggat 19105211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 21963672 - 21963632
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  21963672 tataagaaatcgtaaaaccagaatcaaaattgatggatttt 21963632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 21986108 - 21986068
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  21986108 tataagaaatcgtaaaaccagaatcaaaattgatggatttt 21986068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 22137518 - 22137478
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  22137518 tataagaaatcgtaaaaccaaaatcaaaattgatggatttt 22137478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 27055315 - 27055255
Alignment:
Q  10 aattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatga 70  Q
    |||| ||||||| || |||||| ||||||||||||| ||||| | ||||| ||||||||||    
T  27055315 aattataccaaacaaaaataatgctaaatatatgttgtaaattgcatataatcataaatga 27055255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 27676677 - 27676637
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||||||||||||||||| ||||||||||  |||||||||    
T  27676677 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 27676637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 42696910 - 42696870
Alignment:
Q  172 caaaatcctggattttagtatttaagtcgggattttgacaa 212  Q
    |||||||||| ||||||  ||||||||||||||||||||||    
T  42696910 caaaatcctgaattttatgatttaagtcgggattttgacaa 42696870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 7369 - 7587
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||| |||||||| |||| |||||||||||||||||||||| |||    
T  7369 aaatcgatgaattttaccaaaaaacaataatactaaatatatgttctaattggtatatattcataaattacttcgtttataagaaatcgtaaaatcgcaa 7468  T
Q  101 tcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcg 200  Q
    | ||||| |||| |||||  ||||||||||||||||||||||||||   ||   |||||| ||||||||| |||||||||| ||||||| ||||||||||    
T  7469 ttaaaatcgatgaattttgcctattttaggattctactatggattttgttcgttgaaggtaaagaaagtcgcaaaatcctgaattttagaatttaagtcg 7568  T
Q  201 ggattttgacaacaatggt 219  Q
    ||||| | |||||||||||    
T  7569 ggattctaacaacaatggt 7587  T

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Target: scaffold0042 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 93619 - 93834
Alignment:
Q  1 aaatcgatgaattttaccaaaaaataataatactaaatatatgttataaatggtatat-agtcataaatgacttagtttataagaaatcgtaaaatctca 99  Q
    ||||||||| |||||||||||||  |||| ||||||||||||||||| ||| |||||| ||||||||| |||||| |||| |||||||||||||||| ||    
T  93619 aaatcgatggattttaccaaaaacaaatattactaaatatatgttatgaatcgtatattagtcataaacgacttaatttaaaagaaatcgtaaaatcgca 93718  T
Q  100 atcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtc 199  Q
    |||||||| |||||||||   ||||||||| ||||| ||||||||||||||    || |||||||||| |  |||||| ||||||||||| |||||||||    
T  93719 atcaaaatcgatggatttcgcctattttagaattcttctatggatttgagttgttgagggtgaagaaaat--caaaattctggattttaggatttaagtc 93816  T
Q  200 gggattttgacaacaatg 217  Q
    ||||||||||||||||||    
T  93817 gggattttgacaacaatg 93834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 93593 - 93633
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 118  Q
    ||||| ||||||||||||| |||||||||| ||||||||||    
T  93593 tataataaatcgtaaaatcgcaatcaaaatcgatggatttt 93633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 91 - 231
Alignment:
Q  78 tataagaaatcgtaaaatctcaatcaaaattgatggattttttc-tattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaa 176  Q
    |||||||||| ||||||||||||||||||| ||||||||||  | |||||||| ||| |||||||||||||||||   ||| |||||||||||| |||||    
T  91 tataagaaattgtaaaatctcaatcaaaatcgatggattttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaa 190  T
Q  177 tcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    ||||| ||||||| |||||||||||||| ||  ||||||||    
T  191 tcctgcattttaggatttaagtcgggatcttatcaacaatg 231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 58736 - 58790
Alignment:
Q  41 atgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaat 95  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  58736 atgttataagtggtatatagtcataaatgatttagtttataagaaatcgtaaaat 58790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 8873 - 8952
Alignment:
Q  1 aaatcgatgaattttaccaaaaaata-ataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 79  Q
    ||||||||| |||||||||||| | | ||||| ||||||||||||||||| | |||||||||||||||||||| ||||||    
T  8873 aaatcgatggattttaccaaaacaaagataatgctaaatatatgttataagttgtatatagtcataaatgactcagttta 8952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 217
Target Start/End: Original strand, 9054 - 9150
Alignment:
Q  121 ctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||||| |||||| | |||||||||||||||   ||||||||| ||| ||||||||||||  ||||||  |||||| || |||||||||||||||||    
T  9054 ctatttaaggattttgctatggatttgagtcgttgaaggtgaataaaatcacaaaatcctacattttaaaatttaaatcaggattttgacaacaatg 9150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 48825 - 48918
Alignment:
Q  124 ttttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 217  Q
    |||| |||||||  ||||||||||||||   ||||||||| |||||  |||||| || |||||||| ||||||||||| ||||| |||||||||    
T  48825 ttttgggattctcatatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaacaatg 48918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 37191 - 37296
Alignment:
Q  112 ggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgaca 211  Q
    |||||||  |||||||| |||||| ||||||||||||||    ||||||||| ||| |  |||||| ||| ||||||  ||||||||||| |||||||||    
T  37191 ggattttacctattttaagattctgctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgaca 37290  T
Q  212 acaatg 217  Q
    ||||||    
T  37291 acaatg 37296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 38491 - 38531
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatgactta 74  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  38491 taaatatatgttataaattgtatatagtcataaaggactta 38531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 69
Target Start/End: Original strand, 76273 - 76308
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatg 69  Q
    |||||||||||||||||| |||||||||||||||||    
T  76273 taaatatatgttataaattgtatatagtcataaatg 76308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1178 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1178
Description:

Target: scaffold1178; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 512 - 466
Alignment:
Q  26 aataatactaaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||||| ||||||||||| ||||||| | ||||||||||||||||||    
T  512 aataatgctaaatatatgatataaattgcatatagtcataaatgact 466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 8332 - 8288
Alignment:
Q  27 ataatactaaatatatgttataaatggtatatagtcataaatgact 72  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||    
T  8332 ataatactaaatatatgt-ataaattgcatatagtcataaatgact 8288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 35103 - 35188
Alignment:
Q  131 attctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 216  Q
    ||||||| ||| |||||||||    |||||||| |||||  ||||||  || ||||||| |||||||||| |||||||||||||||    
T  35103 attctacaatgaatttgagtcgttaaaggtgaataaagttccaaaattatgaattttagaatttaagtcgagattttgacaacaat 35188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 133075 - 133112
Alignment:
Q  34 taaatatatgttataaatggtatatagtcataaatgac 71  Q
    |||||||||||||||||| | |||||||||||||||||    
T  133075 taaatatatgttataaattgcatatagtcataaatgac 133112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 5164 - 5208
Alignment:
Q  26 aataatactaaatatatgttataaatggtatatagtcataaatga 70  Q
    |||||| ||||||||||||||||||| | || |||||||||||||    
T  5164 aataatgctaaatatatgttataaattgcatgtagtcataaatga 5208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 142808 - 142764
Alignment:
Q  26 aataatactaaatatatgttataaatggtatatagtcataaatga 70  Q
    |||||| ||||||||||||||||||| | ||||||||| ||||||    
T  142808 aataatgctaaatatatgttataaattgcatatagtcaaaaatga 142764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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