View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11279_low_1 (Length: 1008)
Name: NF11279_low_1
Description: NF11279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11279_low_1 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 849; Significance: 0; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 849; E-Value: 0
Query Start/End: Original strand, 9 - 989
Target Start/End: Complemental strand, 34977121 - 34976141
Alignment:
| Q |
9 |
gaagcaaaggtggaggcgaaaccaaatctaaatcaatgacatcaaaatctatattgtctcccattcctgacacaatgtataaattctccaagtgtcgcat |
108 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
34977121 |
gaagcataggtggaggcgaaaccaaatctaaatcaatgacatcaaaatctatattgtctcccattcctgacacaatgtataaattctccaagtgtttcat |
34977022 |
T |
|
| Q |
109 |
ctcattcagtgaggaagatagagcgcttgaatgttctgccgccacataaaacaagctcaacttccttaactgtctgaactttcccaactctttaattaac |
208 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34977021 |
ctcattcagtgaggaatatagagcgcttgaatgttctgcccttacataaaacaagctcaacttccttaactgtctgaactttcccaactctttaattaac |
34976922 |
T |
|
| Q |
209 |
tctattccatccttaccaattttcactccagtcaatgtttgtagagattccatgcatcctaaaacatccttcaattgaagcatacatctcttgttgccca |
308 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
34976921 |
tctattccatccttaccaattttcactccggtcaatgtttgtaaagattccatgcatcctaacacatccttcaattgaagcatacacctcttgttgccca |
34976822 |
T |
|
| Q |
309 |
taagatggcgtagctttctaagcttgctaatctcctttggtataccggtgagtggataagaagcccttagatccaaagtctccagattttggagaatacc |
408 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34976821 |
taagatggcgtagctttctaagcttgctaatctcctttggtataacggtaagaggaaaagaagcccttagatccaaagtctccagattttggagaatacc |
34976722 |
T |
|
| Q |
409 |
aatccatttgggaaaaccaggttggtttcgtcgtatggataaatttttgaagcttagatatttcaagtggatcagacttctataaggtttaaaatcaata |
508 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34976721 |
aatccatttgggaaaaccatgttggtttcgtcgtatggataaatttttgaagcttaaatatttcaagtggatcagacttctaaaaggtttaaaatcaata |
34976622 |
T |
|
| Q |
509 |
aacaatgcacctttaaaatcaagcaccttcagtgtcctatgttttttcaagattctattcacgatggattcctcttcataatttgatttatctatgaaaa |
608 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
34976621 |
aacaatgcacctttaaaatcaagcaccttcagtgtcctatgctttttcaagattctattcacgatggattcctcttcataatttgatttatctgtgaaaa |
34976522 |
T |
|
| Q |
609 |
gaaatagtgaccgaatatgtgagttttaaatacatgctctgaaatcaccggaactagttgttattgataggcgtctaatagttccacttaaagatgaatg |
708 |
Q |
| |
|
||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34976521 |
gaaatagagacagaatatgtgagttttcaatacatgctctgaaatcaccggaactagttgctattgataggcgtctaatagttccacttaaagatgaatg |
34976422 |
T |
|
| Q |
709 |
accatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagattttcca |
808 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
34976421 |
accatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatcatcatacgtatcagatcatgaacacaacaacttttaggctttcca |
34976322 |
T |
|
| Q |
809 |
tctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctttca |
908 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
34976321 |
tcaattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaatatccttttgcaacttcttccaaagtcttgccactttcctccttca |
34976222 |
T |
|
| Q |
909 |
caaacccttcagctatccactgtagaatcactctctttgatttaacttcataatcttctggatacattccaaaatataaca |
989 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
34976221 |
caaacccttcagctatccactgtagaatcactctctttgatttaacttcataaccttttggatacattccaaaatataaca |
34976141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 514; E-Value: 0
Query Start/End: Original strand, 9 - 986
Target Start/End: Original strand, 2304204 - 2305179
Alignment:
| Q |
9 |
gaagcaaaggtggaggcgaaaccaaatctaaatcaatgacatcaaaatctatattgtctcccattcctgacacaatgtataaattctccaagtgtcgcat |
108 |
Q |
| |
|
|||||| ||||||| |||||||||||| ||||||||||||||||||| | || ||||| ||| ||||| |||| |||| |||||| |||||||||| |
|
|
| T |
2304204 |
gaagcataggtggaagcgaaaccaaatgtaaatcaatgacatcaaaaaccccatcatctccgcttcttgacataatgcataatttctccgagtgtcgcat |
2304303 |
T |
|
| Q |
109 |
ctcattcagtgaggaagatagagcgcttgaatgttctgccgccacataaaacaagctcaacttccttaactgtctgaactttcccaactctttaattaac |
208 |
Q |
| |
|
|||||||| |||||||||| |||| ||||||||||| | ||||| ||||||||| |||||||||||||| || | |||||||||||||||||||||| |
|
|
| T |
2304304 |
ctcattcaacgaggaagataaagcgattgaatgttctagcctcacatcaaacaagctaaacttccttaactgccttagctttcccaactctttaattaac |
2304403 |
T |
|
| Q |
209 |
tctattccatccttaccaattttcactccagtcaatgtttgtagagattccatgcatcctaaaacatccttcaattgaagcatacatctcttgttgccca |
308 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||| | |||| ||||| |
|
|
| T |
2304404 |
tctattccacccttaccaattttcattccagtcaatgtttgtagagattccatgcctcctataacatccttcaattgaaacaaacagatattgtagccca |
2304503 |
T |
|
| Q |
309 |
taagatggcgtagctttctaagcttgctaatctcctttggtataccggtgagtggataagaagcccttagatccaaagtctccagattttggagaatacc |
408 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||| ||| | | ||||| |||||||||||| |||||||||||| | |||| ||| |
|
|
| T |
2304504 |
taagatggcatagctttctaagcttgctaatctcctttggtataatggtaaaacaagaagaactccttagatccaaggtctccagatttagaagaagacc |
2304603 |
T |
|
| Q |
409 |
aatccatttgggaaaaccaggttggtttcgtcgtatggataaatttttgaagcttagatatttcaagtggatcagacttctataaggtttaaaatcaata |
508 |
Q |
| |
|
|||||||||||||| || ||||| | ||| ||||| ||| || |||||| |||||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
2304604 |
aatccatttgggaagtacattttggtatagtcc---ggatatattctt--agcttaaatatttcaagtggaacagacttctaaaaggttcaaaatcaata |
2304698 |
T |
|
| Q |
509 |
aacaat---gcacctttaaaatcaagcaccttcagtgtcctatgttttttcaagattctattcacgatggattcctcttcataatttgatttatctatga |
605 |
Q |
| |
|
|||||| ||| ||| |||||||||||||||||||||||| || ||||||||||||||| ||| ||| ||| |||| |||| |||||||||| | ||| |
|
|
| T |
2304699 |
aacaatttggcatcttgaaaatcaagcaccttcagtgtcctgtgctttttcaagattctactcatgatagatatctctacatactttgatttatttgtga |
2304798 |
T |
|
| Q |
606 |
aaagaaatagtgaccgaatatgtgagttttaaatacatgctctgaaatcaccggaactagttgttattgataggcgtctaatagttccacttaaagatga |
705 |
Q |
| |
|
||| ||||| |||||||||||||||||||| ||||||||| || |||| || |||| |||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2304799 |
aaaaaaatactgaccgaatatgtgagttttcaatacatgcccttaaataactggaataggttgctattgataagcgtctaatagttccacttaaagatga |
2304898 |
T |
|
| Q |
706 |
atgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagatttt |
805 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
2304899 |
atgattgacttcattgaaatgcttgaaaaaacttaaatcctcacacttttctaggaacattatacgtatcagatcatgaacacaacaacttttagatttt |
2304998 |
T |
|
| Q |
806 |
ccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctt |
905 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
2304999 |
ccatcaatgctaactgaggatacttgcaccaaacttcgacgaatcaactctgataaatatccttctgcaacttcttccaaagtcttcccactttcctcct |
2305098 |
T |
|
| Q |
906 |
tcacaaacccttcagctatccactgtagaatcactctctttgatttaacttcataatcttctggatacattccaaaatata |
986 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2305099 |
tcacaaacccttcagctatccactgtcgaatcactctctttgatttaacttcataatcttctggatacattccaaaatata |
2305179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 367 - 989
Target Start/End: Complemental strand, 34983871 - 34983252
Alignment:
| Q |
367 |
agaagcccttagatccaaagtctccagattttggagaataccaatccatttgggaaaaccaggttggtttcgtcgtatggataaatttttgaagcttaga |
466 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| ||||| | || ||||| ||||||| |||||||||| | |
|
|
| T |
34983871 |
agaagcccttagatccaaggtctccagatttaggagaataccaatccatttgggaaatccatgttggctatgttgtatgtataaattcttgaagcttaaa |
34983772 |
T |
|
| Q |
467 |
tatttcaagtggatcagacttctataaggtttaaaatcaataaacaat---gcacctttaaaatcaagcaccttcagtgtcctatgttttttcaagattc |
563 |
Q |
| |
|
|||||||||||||||||||||||| || |||||| ||| |||| ||| ||| ||| |||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
34983771 |
tatttcaagtggatcagacttctaaaatgtttaagatccctaaaaaatctggcatcttgaaaatcaagcaccttcagtgtcctgtactttttcaagattc |
34983672 |
T |
|
| Q |
564 |
tattcacgatggattcctcttcataatttgatttatctatgaaaagaaatagtgaccgaatatgtgagttttaaatacatgctctgaaatcaccggaact |
663 |
Q |
| |
|
|||||||| ||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||| | || |||| || |
|
|
| T |
34983671 |
tattcacgctggattcctttgcattatttgatttatctgtgaaaagaaatagtgaccgaatatgtgagttttcattacatgcatttaagtcactgg---- |
34983576 |
T |
|
| Q |
664 |
agttgttattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatc |
763 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34983575 |
--ttgctattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatc |
34983478 |
T |
|
| Q |
764 |
atcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaat |
863 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34983477 |
atcatacgtatcagatcatgaacacaacaacttttaggctttccatcaattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaat |
34983378 |
T |
|
| Q |
864 |
atccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatccactgtagaatcactctctttgatttaacttcataatc |
963 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
34983377 |
atccttttgcaacttcttccaaagtcttgccactttcctccttcacaaacccttcagctatccactgtagaatcactctctttgatttaacttcataacc |
34983278 |
T |
|
| Q |
964 |
ttctggatacattccaaaatataaca |
989 |
Q |
| |
|
|| ||||||||||||||||||||||| |
|
|
| T |
34983277 |
ttttggatacattccaaaatataaca |
34983252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 458 - 989
Target Start/End: Complemental strand, 34990521 - 34989987
Alignment:
| Q |
458 |
aagcttagatatttcaagtggatcagacttctataaggtttaaaatcaataaacaatgc---acctttaaaatcaagcaccttcagtgtcctatgttttt |
554 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |||||||| |||||| ||| || | | ||| |||| |||||||||||||||||| || |||| |
|
|
| T |
34990521 |
aagcttagatatttcaagtggatcagacatctaaaaggtttataatcaacaaaacatccgacatcttctaaatgaagcaccttcagtgtcctctgctttt |
34990422 |
T |
|
| Q |
555 |
tcaagattctattcacgatggattcctcttcataatttgatttatctatgaaaagaaatagtgaccgaatatgtgagttttaaatacatgctctgaaatc |
654 |
Q |
| |
|
| || ||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
34990421 |
tgaatattcttttcaggatggattcctctaaataatttgatttatctgtgaaaagaaatagtgaccgaatatgtgagttttcaatacatgctctgaaatc |
34990322 |
T |
|
| Q |
655 |
accggaactagttgttattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttt |
754 |
Q |
| |
|
|||||| | |||| ||||||||||||||| |||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34990321 |
accggagtttgttgctattgataggcgtctgatagttccacttaaagatgaatgatcgtcatcattgaaatgcttgcaaaaacttaaatcctcacacttt |
34990222 |
T |
|
| Q |
755 |
tcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaact |
854 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||| ||| ||||||||| || |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
34990221 |
tcaaggatcatcatatgtatcagatcatgaacacaacaacttctagtttttccatcaatgctaactgaggatacttgcaccaaacttctacgaatcaact |
34990122 |
T |
|
| Q |
855 |
ctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatccactgtagaatcactctctttgatttaac |
954 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| ||||||||||||||| |
|
|
| T |
34990121 |
ctgttaaatatctttcttcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatccattgttgtatcattctctttgatttaac |
34990022 |
T |
|
| Q |
955 |
ttcataatcttctggatacattccaaaatataaca |
989 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
34990021 |
ttcataatcttctggatacattccaaaatataaca |
34989987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 76 - 423
Target Start/End: Complemental strand, 34990930 - 34990583
Alignment:
| Q |
76 |
tgacacaatgtataaattctccaagtgtcgcatctcattcagtgaggaagatagagcgcttgaatgttctgccgccacataaaacaagctcaacttcctt |
175 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||| | |||||||||||||||| |
|
|
| T |
34990930 |
tgacacaatgcgtaatttctccaagtgtcgcatctcattcagtgaggaagataaagcgcttgaatgtcttgccctcacatcattcaagctcaacttcctt |
34990831 |
T |
|
| Q |
176 |
aactgtctgaactttcccaactctttaattaactctattccatccttaccaattttcactccagtcaatgtttgtagagattccatgcatcctaaaacat |
275 |
Q |
| |
|
||| | || | |||||||||||| ||||| |||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||| | ||||| |
|
|
| T |
34990830 |
aaccgccttagctttcccaactccttaatcaactctattccacccttaccaattttcactccactcaacgtttgtagagattccatgcatccaataacat |
34990731 |
T |
|
| Q |
276 |
ccttcaattgaagcatacatctcttgttgcccataagatggcgtagctttctaagcttgctaatctcctttggtataccggtgagtggataagaagccct |
375 |
Q |
| |
|
||||||| |||| || | | || || || |||||||||||||||| |||||||||||||||||||||||||||| | | | | ||| ||| || |
|
|
| T |
34990730 |
ccttcaaatgaaacaaagacatcctgcaacctataagatggcgtagctgtctaagcttgctaatctcctttggtataatgataaaaccaaaagcagctct |
34990631 |
T |
|
| Q |
376 |
tagatccaaagtctccagattttggagaataccaatccatttgggaaa |
423 |
Q |
| |
|
||||||||| ||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
34990630 |
tagatccaaggtctcaagatttaggagaataccaatccatttgggaaa |
34990583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 9 - 287
Target Start/End: Complemental strand, 34984168 - 34983890
Alignment:
| Q |
9 |
gaagcaaaggtggaggcgaaaccaaatctaaatcaatgacatcaaaatctatattgtctcccattcctgacacaatgtataaattctccaagtgtcgcat |
108 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||| ||| | ||| || ||||||||||||| |||| || || ||||||||||| |
|
|
| T |
34984168 |
gaagcataggtggaggcgaaaccaaatgtaaatcaatgacatcataataagaaccatcttcccatcctgacacaatgcataatttttctaagtgtcgcat |
34984069 |
T |
|
| Q |
109 |
ctcattcagtgaggaagatagagcgcttgaatgttctgccgccacataaaacaagctcaacttccttaactgtctgaactttcccaactctttaattaac |
208 |
Q |
| |
|
|||||||| ||||||||||| |||||| ||||||||||| | ||||||||||| ||||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
34984068 |
ctcattcaatgaggaagataaagcgctaaaatgttctgccctcgcataaaacaaggtcaacttccttaactgtcttagctttcccaactctttaattaac |
34983969 |
T |
|
| Q |
209 |
tctattccatccttaccaattttcactccagtcaatgtttgtagagattccatgcatcctaaaacatccttcaattgaa |
287 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
34983968 |
tctattccacccttaccaattttcactccactcaatgtttgtagagattccatgcctcctataacatccttcaattgaa |
34983890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 512; Significance: 0; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 512; E-Value: 0
Query Start/End: Original strand, 9 - 989
Target Start/End: Complemental strand, 40581678 - 40580704
Alignment:
| Q |
9 |
gaagcaaaggtggaggcgaaaccaaatctaaatcaatgacatcaaaatctatattgtctcccattcctgacacaatgtataaattctccaagtgtcgcat |
108 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||| || | | || | |||| |||||| |||||| ||| || | |||||||||||| |
|
|
| T |
40581678 |
gaagcataggtggaggcgaaaccaaatgtaaatcaatgacatcataaacaaaatcttgtccccatcctgatacaatgcttaattttttcaagtgtcgcat |
40581579 |
T |
|
| Q |
109 |
ctcattcagtgaggaagatagagcgcttgaatgttctgccgccacataaaacaagctcaacttccttaactgtctgaactttcccaactctttaattaac |
208 |
Q |
| |
|
|||||||| ||||||||||| |||||| ||||||||||| | ||||||||||| |||||||||||||||| || | ||||| |||||||||||||||| |
|
|
| T |
40581578 |
ctcattcaatgaggaagataaagcgctaaaatgttctgccctcgcataaaacaagttcaacttccttaactgccttagctttctcaactctttaattaac |
40581479 |
T |
|
| Q |
209 |
tctattccatccttaccaattttcactccagtcaatgtttgtagagattccatgcatcctaaaacatccttcaattgaagcatacatctcttgttgccca |
308 |
Q |
| |
|
||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||| ||| | || ||| |||||| ||||| |
|
|
| T |
40581478 |
tctattccacccttaccaattttcactgcactcaatgtttgtagagattccatgcatcctataacatccttccatttagacaaacacatcttgtagccca |
40581379 |
T |
|
| Q |
309 |
taagatggcgtagctttctaagcttgctaatctcctttggtataccggtgagtggataagaagcccttagatccaaagtctccagattttggagaatacc |
408 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||||||| || | ||||||||||||||||||||| |||||||||||| |||||| ||| |
|
|
| T |
40581378 |
taagatggcgtagctttctaagtttgctaatgtcctttggtataacgctacaataataagaagcccttagatccaaggtctccagatttaggagaagacc |
40581279 |
T |
|
| Q |
409 |
aatccatttgggaaaaccaggttggtttcgtcgtatggataaatttttgaagcttagatatttcaagtggatcagacttctataaggtttaaaatcaata |
508 |
Q |
| |
|
|||||||||||||| || ||||| || || |||| | | |||||||||| |||||||||||||| |||||||||| || |||||||||||||| |
|
|
| T |
40581278 |
aatccatttgggaagtacattttggt---gttgttcggatctaatcttgaagcttaaatatttcaagtggaccagacttctaaaatgtttaaaatcaata |
40581182 |
T |
|
| Q |
509 |
aacaatg---cacctttaaaatcaagcaccttcagtgtcctatgttttttcaagattctattcacgatggattcctcttcataatttgatttatctatga |
605 |
Q |
| |
|
| ||||| || ||| |||||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||| ||||| |||| | ||| |
|
|
| T |
40581181 |
atcaatgagtcatcttgaaaatcaagcaccttcagtgtcctgtgctttttcaagattctattcaccatggattcatcta---aattt---ttatttgtga |
40581088 |
T |
|
| Q |
606 |
aaagaaatagtgaccgaatatgtgagttttaaatacatgctctgaaatcaccggaactagttgttattgataggcgtctaatagttccacttaaagatga |
705 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||| |||| ||||||||| |||| | ||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
40581087 |
aaagttgtagtgaccgaatatgtgagttttcaatacgtgctatgaaatcactggaattggttgttactgataggcgtctaagagttccacttaaagatga |
40580988 |
T |
|
| Q |
706 |
atgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagatttt |
805 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||| |||| |
|
|
| T |
40580987 |
atgaccatcttcattgaaatgcttgcaaaaacttaattcctcacacttttcatggatcatcatacgtatcaaatcgtgaacaaaacaacttttagttttt |
40580888 |
T |
|
| Q |
806 |
ccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctt |
905 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| | |
|
|
| T |
40580887 |
ccatcaattctaattgaggatacttgcaccaaactacgacgaatcaactcagttaaatatacttcagcaacttcttccaaagtctttccactttcctcct |
40580788 |
T |
|
| Q |
906 |
tcacaaacccttcagctatccactgtagaatcactctctttgatttaacttcataatcttctggatacattccaaaatataaca |
989 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40580787 |
tcacaaacccttcagctatccactgtagaatcactctctttgatttaacttcataatcttctggatacattccaaaatataaca |
40580704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 670 - 883
Target Start/End: Complemental strand, 27373562 - 27373349
Alignment:
| Q |
670 |
tattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatcatcata |
769 |
Q |
| |
|
|||||||||||||| || ||||| ||| |||||||| | || |||||||| |||||||| || | |||| |||||||||| |||||||||| | |
|
|
| T |
27373562 |
tattgataggcgtcgaactgttccgtttatggatgaatggctattttcattgatatgcttgcttaattctgaatcatcacactttttaaggatcatctca |
27373463 |
T |
|
| Q |
770 |
cgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaatatcctt |
869 |
Q |
| |
|
||||| | |||||| || |||||| | ||| | |||||| ||||||| ||| | |||||||||||| ||| | | ||||||| |||||||| | |
|
|
| T |
27373462 |
cgtattagatcatggtcaaaacaacctctagttgttccatttattctacttgaataaacttgcaccaaatttctatggatcaacttgtttaaatattcgg |
27373363 |
T |
|
| Q |
870 |
ctgcaacttcttcc |
883 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
27373362 |
ctgcaacttcttcc |
27373349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 247; Significance: 1e-136; HSPs: 36)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 456 - 989
Target Start/End: Original strand, 22656226 - 22656762
Alignment:
| Q |
456 |
tgaagcttagatatttcaagtggatcagacttctataaggtttaaaatcaataaacaat---gcacctttaaaatcaagcaccttcagtgtcctatgttt |
552 |
Q |
| |
|
||||||||| |||||| ||||||| |||||||| || |||| ||||||||| ||| ||| ||| |||||||||||||||||||| ||| ||||| |
|
|
| T |
22656226 |
tgaagcttaaatattttaagtggaccagacttcccaaatttttataatcaataagtaatatggcatcttgaaaatcaagcaccttcagtggcctgtgttt |
22656325 |
T |
|
| Q |
553 |
tttcaagattctattcacgatggattcctcttcataatttgatttatctatgaaaagaaatagtgaccgaatatgtgagttttaaatacatgctctgaaa |
652 |
Q |
| |
|
| ||||||||||| | | ||| ||| ||| | |||||||||||| | ||||||||||||||||||||| || |||||||| |||||||| | ||| |
|
|
| T |
22656326 |
tgtcaagattctacttataatgttttcatctaaaaaatttgatttatttgtgaaaagaaatagtgaccgaacatatgagttttcaatacatgttgctaaa |
22656425 |
T |
|
| Q |
653 |
tcaccggaactagttgttattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacact |
752 |
Q |
| |
|
||| |||| ||| || |||||||||||||| |||| ||||||||| ||||||||| |||||| || | | ||||||||| ||||||||||||||||||| |
|
|
| T |
22656426 |
tcattggaattagctgatattgataggcgtcgaataattccacttatagatgaatggccatctgcactaatatgcttgcagaaacttaaatcctcacact |
22656525 |
T |
|
| Q |
753 |
tttcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaa |
852 |
Q |
| |
|
||||||||||||||||| |||| |||||||| |||||||||||||||| |||||| || |||||||||||||||||||| ||||||| ||| |||||||| |
|
|
| T |
22656526 |
tttcaaggatcatcatatgtattaaatcatggacacaacaacttttagtttttccgtcaattctaactgaggatacttgtaccaaacatcggcgaatcaa |
22656625 |
T |
|
| Q |
853 |
ctctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatccactgtagaatcactctctttgattta |
952 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||| || | |||||||||||||||| | |
|
|
| T |
22656626 |
ctctgttaaatatccttctgcaacttcttccaaagttttccccctttcttctttcacaaaaccttcagctatccattgccgtatcactctctttgattca |
22656725 |
T |
|
| Q |
953 |
acttcataatcttctggatacattccaaaatataaca |
989 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
22656726 |
acttcataatcttctggatatattccaaaatacaaca |
22656762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 665 - 984
Target Start/End: Original strand, 22620268 - 22620587
Alignment:
| Q |
665 |
gttgttattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatca |
764 |
Q |
| |
|
|||| |||||||||||||| | || | |||||||||||||||||| ||||||| | | || |||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
22620268 |
gttgctattgataggcgtcgagtaacttcacttaaagatgaatgacaatcttcactaatatacttgcaaaaacttagatcctcacacttttcaagtatca |
22620367 |
T |
|
| Q |
765 |
tcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaata |
864 |
Q |
| |
|
|||||||||| | ||||||||| ||||||||||| | ||||||||| ||||| | ||| ||||||||||||||||||| | | |||||||||||||| || |
|
|
| T |
22620368 |
tcatacgtattagatcatgaacgcaacaactttttgtttttccatcgattcttagtgaagatacttgcaccaaacttctatggatcaactctgttaagta |
22620467 |
T |
|
| Q |
865 |
tccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatccactgtagaatcactctctttgatttaacttcataatct |
964 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||||||||| || |||||| ||||||||| | ||||| ||||||| |
|
|
| T |
22620468 |
tccttctgcaacttcttccaaagtattccccctttcttcttttacaaacccttcagctatccattgccgaatcaatctctttgaatcaactttataatct |
22620567 |
T |
|
| Q |
965 |
tctggatacattccaaaata |
984 |
Q |
| |
|
|||||||| | ||||||||| |
|
|
| T |
22620568 |
tctggatataatccaaaata |
22620587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 603 - 987
Target Start/End: Original strand, 22647494 - 22647878
Alignment:
| Q |
603 |
tgaaaagaaatagtgaccgaatatgtgagttttaaatacatgctctgaaatcaccggaactagttgttattgataggcgtctaatagttccacttaaaga |
702 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| | ||||||| ||||| |||| ||||||| ||| |||||| ||| || || |||||| |
|
|
| T |
22647494 |
tgaaaagaaatagtgaccgaacatgtgaattttcactacatgccggaaaatctttggaataggttgttaatgaatggcgtcgaatgatttcaaataaaga |
22647593 |
T |
|
| Q |
703 |
tgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagat |
802 |
Q |
| |
|
|||| || |||||||| | | ||||||||| ||||||| |||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||| | |
|
|
| T |
22647594 |
tgaaagatcatcttcactaatatgcttgcagaaacttatatcctcactcttttcaaggatcatcatatgtatcagatcatgaacacagcaacttttagtt |
22647693 |
T |
|
| Q |
803 |
tttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagtcttcccactttcct |
902 |
Q |
| |
|
|||||||| ||||||||||| |||||||| |||||||||| | | |||||||| |||||||||| |||||||||||||||||| || | ||| ||||| | |
|
|
| T |
22647694 |
tttccatcaattctaactgaagatacttgaaccaaacttctatggatcaactcagttaaatatcgttctgcaacttcttccaaggtataccccctttctt |
22647793 |
T |
|
| Q |
903 |
ctttcacaaacccttcagctatccactgtagaatcactctctttgatttaacttcataatcttctggatacattccaaaatataa |
987 |
Q |
| |
|
|||||||||| |||||||||| ||||||| ||| || |||| | ||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22647794 |
ctttcacaaatccttcagctacccactgtcgaaacagtctcctcgatccaacttcataatcttcgggatacattccaaaatataa |
22647878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 665 - 989
Target Start/End: Original strand, 30988677 - 30989001
Alignment:
| Q |
665 |
gttgttattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatca |
764 |
Q |
| |
|
||||||||||||||||| | || ||||||||||| |||| || ||| ||||| ||| | ||||||||||| ||||||||||| | ||||||||||||| |
|
|
| T |
30988677 |
gttgttattgataggcggcgaaatgttccacttaagtatgattgtccaccttcactgataagcttgcaaaaatttaaatcctcaaatttttcaaggatca |
30988776 |
T |
|
| Q |
765 |
tcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaata |
864 |
Q |
| |
|
| ||||| | ||||||||||| ||||| ||||| ||| ||||| | |||||| || |||||||||||||| |||| | | ||||||||||||||||| |
|
|
| T |
30988777 |
tatcgcgtattagatcatgaacacgacaacctttagctttaccatcaactctaaccgaagatacttgcaccaagcttctatggatcaactctgttaaata |
30988876 |
T |
|
| Q |
865 |
tccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatccactgtagaatcactctctttgatttaacttcataatct |
964 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||| ||| ||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
30988877 |
tccttctgcaacgtcttccaaagtcttccctctttcctccttcacgaacccttcagctacccattgtcgaatcaatctctttgatttaacttcataatct |
30988976 |
T |
|
| Q |
965 |
tctggatacattccaaaatataaca |
989 |
Q |
| |
|
|||||||| ||||||||||| |||| |
|
|
| T |
30988977 |
tctggatatattccaaaatacaaca |
30989001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 130; E-Value: 8e-67
Query Start/End: Original strand, 724 - 989
Target Start/End: Complemental strand, 21946659 - 21946394
Alignment:
| Q |
724 |
atgcttgcaaaaacttaaatcctcacacttttcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgag |
823 |
Q |
| |
|
||||||||||||| | |||||||| |||||||||||||| | | ||| | ||||||||||| ||||| ||||| ||| ||||| ||||||| ||| |
|
|
| T |
21946659 |
atgcttgcaaaaattaaaatcctcgtgtttttcaaggatcatattgcatattagatcatgaacacgacaacctttagctttaccatcaattctaagtgaa |
21946560 |
T |
|
| Q |
824 |
gatacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagcta |
923 |
Q |
| |
|
|||||||| |||| |||| | | |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
21946559 |
gatacttgaaccaggcttctatggatcaactctgttaaatatccttctgccacttcttccaaagtcttccctctttcctccttcacaaacccttcagcta |
21946460 |
T |
|
| Q |
924 |
tccactgtagaatcactctctttgatttaacttcataatcttctggatacattccaaaatataaca |
989 |
Q |
| |
|
|||| ||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||| |||| |
|
|
| T |
21946459 |
tccattgtcgaatcactctcttcgatttaacttcataatcttctggatatactccaaaataaaaca |
21946394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 665 - 981
Target Start/End: Complemental strand, 22105802 - 22105486
Alignment:
| Q |
665 |
gttgttattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatca |
764 |
Q |
| |
|
||||||||||||||||| | || |||||| ||| |||| || ||||| ||| | | ||||||||||||| | ||||||||| |||| ||||||||| |
|
|
| T |
22105802 |
gttgttattgataggcgccgaactattccacctaaggatgtctgtccatcatcactaatatgcttgcaaaaattaaaatcctcattctttgcaaggatca |
22105703 |
T |
|
| Q |
765 |
tcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaata |
864 |
Q |
| |
|
| |||||| | ||||||||||| ||||| ||||| ||| ||||| ||||||| ||||||||||| |||| |||| | | ||||||||||||||||| |
|
|
| T |
22105702 |
tatcacgtattagatcatgaacacgacaacctttagttttgccatcaattctaagcgaggatacttgaaccaggcttctatggatcaactctgttaaata |
22105603 |
T |
|
| Q |
865 |
tccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatccactgtagaatcactctctttgatttaacttcataatct |
964 |
Q |
| |
|
||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||||||| ||| || |||||||||| |||||||||||||||||| |
|
|
| T |
22105602 |
tccttctgccacttcgtccaaagtcttccccttttcctccttcacaaacccttcagctatccattgtcgagtcactctcttcgatttaacttcataatct |
22105503 |
T |
|
| Q |
965 |
tctggatacattccaaa |
981 |
Q |
| |
|
|||||||| | |||||| |
|
|
| T |
22105502 |
tctggatatactccaaa |
22105486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 724 - 989
Target Start/End: Complemental strand, 22053741 - 22053476
Alignment:
| Q |
724 |
atgcttgcaaaaacttaaatcctcacacttttcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgag |
823 |
Q |
| |
|
||||||| ||||| | |||||||||| | |||||||||||| | |||| | ||||||||||| ||| | ||||| ||| ||||| ||||||| ||| |
|
|
| T |
22053741 |
atgcttggaaaaattaaaatcctcactttcttcaaggatcatattgtgtattagatcatgaacacgacatcctttagctttgccatcaattctaagtgaa |
22053642 |
T |
|
| Q |
824 |
gatacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagcta |
923 |
Q |
| |
|
|||||||| |||| |||| | | |||||||||| ||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| |||| |
|
|
| T |
22053641 |
gatacttgaaccaggcttctatggatcaactctgataaatatccttctgccacttcttccaaagtcttccccttttcctccttcacaaacccttctgcta |
22053542 |
T |
|
| Q |
924 |
tccactgtagaatcactctctttgatttaacttcataatcttctggatacattccaaaatataaca |
989 |
Q |
| |
|
|||| ||| ||||||||| |||||| ||||||||||||||||||||||| | ||||||||| |||| |
|
|
| T |
22053541 |
tccattgtcgaatcactcgctttgaattaacttcataatcttctggatatactccaaaatacaaca |
22053476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 724 - 984
Target Start/End: Complemental strand, 21931456 - 21931196
Alignment:
| Q |
724 |
atgcttgcaaaaacttaaatcctcacacttttcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgag |
823 |
Q |
| |
|
||||||||||||| | ||||||||| |||| ||||||||| |||| | ||||||||||| ||||| ||||| ||| ||||| ||||||| ||| |
|
|
| T |
21931456 |
atgcttgcaaaaattaaaatcctcatgtttttgaaggatcatatcgtgtattagatcatgaacacgacaacctttagctttgccatcaattctaagtgaa |
21931357 |
T |
|
| Q |
824 |
gatacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagcta |
923 |
Q |
| |
|
|||||||| || | |||| | | |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| || |||||||||||||||| |
|
|
| T |
21931356 |
gatacttgaacgaggcttctatggatcaactctgttaaatatccttctgccacttcttccaaagtcatccccttttcctccttgacaaacccttcagcta |
21931257 |
T |
|
| Q |
924 |
tccactgtagaatcactctctttgatttaacttcataatcttctggatacattccaaaata |
984 |
Q |
| |
|
|||| ||| || ||||||||||||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
21931256 |
tccattgtcgagtcactctctttgatttaacttcataatcttctggatatactccaaaata |
21931196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 665 - 989
Target Start/End: Complemental strand, 22029094 - 22028770
Alignment:
| Q |
665 |
gttgttattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatca |
764 |
Q |
| |
|
||||||||||| ||||| | || |||||||||| |||| || ||||| ||| | | ||||||||||||| | |||||||||| ||||||||||||| |
|
|
| T |
22029094 |
gttgttattgacaggcgccgaactattccacttaaggatgtttgcccatcatcactaacatgcttgcaaaaattaaaatcctcacttttttcaaggatca |
22028995 |
T |
|
| Q |
765 |
tcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaata |
864 |
Q |
| |
|
| | ||||| | ||||||||||| ||| | ||||| ||| ||||| ||| ||| ||| ||||||||||||| |||| | ||||||||| | | ||| |
|
|
| T |
22028994 |
tattgcgtattagatcatgaacacgacatcctttagctttgccatcaattttaagtgaagatacttgcaccaggcttctattgatcaactctatgagata |
22028895 |
T |
|
| Q |
865 |
tccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatccactgtagaatcactctctttgatttaacttcataatct |
964 |
Q |
| |
|
||| ||||| ||||||| |||||||||| | ||||||| | |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
22028894 |
tccctctgccacttcttgcaaagtcttctccttttcctcccttacaaacccttcagctatccattgtcgaatcactctctttgatttaacttcataatct |
22028795 |
T |
|
| Q |
965 |
tctggatacattccaaaatataaca |
989 |
Q |
| |
|
|||||||| | ||||||||| |||| |
|
|
| T |
22028794 |
tctggatatactccaaaatacaaca |
22028770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 665 - 989
Target Start/End: Complemental strand, 22188082 - 22187758
Alignment:
| Q |
665 |
gttgttattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatca |
764 |
Q |
| |
|
||||||||||| ||||| | || |||||||||| |||| || ||||| ||| | | ||||||||||||| | |||||||||| ||||||||||||| |
|
|
| T |
22188082 |
gttgttattgacaggcgccgaactattccacttaaggatgtttgcccatcatcactaacatgcttgcaaaaattaaaatcctcacttttttcaaggatca |
22187983 |
T |
|
| Q |
765 |
tcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaata |
864 |
Q |
| |
|
| | ||||| | ||||||||||| ||| | ||||| ||| ||||| ||| ||| ||| ||||||||||||| |||| | ||||||||| | | ||| |
|
|
| T |
22187982 |
tattgcgtattagatcatgaacacgacatcctttagctttgccatcaattttaagtgaagatacttgcaccaggcttctattgatcaactctatgagata |
22187883 |
T |
|
| Q |
865 |
tccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatccactgtagaatcactctctttgatttaacttcataatct |
964 |
Q |
| |
|
||| ||||| ||||||| |||||||||| | ||||||| | |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
22187882 |
tccctctgccacttcttgcaaagtcttctccttttcctcccttacaaacccttcagctatccattgtcgaatcactctctttgatttaacttcataatct |
22187783 |
T |
|
| Q |
965 |
tctggatacattccaaaatataaca |
989 |
Q |
| |
|
|||||||| | ||||||||| |||| |
|
|
| T |
22187782 |
tctggatatactccaaaatacaaca |
22187758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 710 - 989
Target Start/End: Complemental strand, 21938202 - 21937923
Alignment:
| Q |
710 |
ccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagattttccat |
809 |
Q |
| |
|
||||| ||| ||| ||||||||||||| | ||||||||| |||||||||||||| |||||| | ||||||||||| ||||| ||||| ||| |||| |
|
|
| T |
21938202 |
ccatcatcactgatatgcttgcaaaaattaaaatcctcatctttttcaaggatcatatcacgtattagatcatgaacacgacaacctttagctttgccat |
21938103 |
T |
|
| Q |
810 |
ctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctttcac |
909 |
Q |
| |
|
| ||||||| |||||||||||| |||| |||| | | ||||||||||||| |||||| ||||| |||||||||| |||||| || ||||||| ||||| |
|
|
| T |
21938102 |
caattctaagtgaggatacttgaaccaggcttctatgtatcaactctgttagatatccctctgccacttcttccatagtctttcccttttcctccttcac |
21938003 |
T |
|
| Q |
910 |
aaacccttcagctatccactgtagaatcactctctttgatttaacttcataatcttctggatacattccaaaatataaca |
989 |
Q |
| |
|
||| |||||||||||||| ||| |||| |||||||||| | ||| |||| ||||||||||||| | ||||||||| |||| |
|
|
| T |
21938002 |
aaatccttcagctatccattgtcgaatgactctctttggtctaatttcaaaatcttctggatatactccaaaatacaaca |
21937923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 665 - 989
Target Start/End: Complemental strand, 22180511 - 22180187
Alignment:
| Q |
665 |
gttgttattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatca |
764 |
Q |
| |
|
||||||||||||||||| | || |||||||||| ||| || ||||| ||| | | ||||||||||||| | ||||||||| |||| |||||||| |
|
|
| T |
22180511 |
gttgttattgataggcgccgaactattccacttaaggatatctgtccatcatcactaatatgcttgcaaaaattaaaatcctcatttttttgaaggatca |
22180412 |
T |
|
| Q |
765 |
tcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaata |
864 |
Q |
| |
|
| |||||| | ||||||||||| ||||| ||||| ||| ||||| ||||||| || |||||||| |||| |||| | | ||||||||||||| ||| |
|
|
| T |
22180411 |
tatcacgtattagatcatgaacacgacaacctttagctttgccatcaattctaagcgaagatacttgaaccaggcttctatggatcaactctgttagata |
22180312 |
T |
|
| Q |
865 |
tccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatccactgtagaatcactctctttgatttaacttcataatct |
964 |
Q |
| |
|
||| ||||| |||||||||| || || || ||||||| ||||||||||||||||||||||| | | || | |||||||| ||||||||||||||||| |
|
|
| T |
22180311 |
tccctctgccacttcttccattgtttttcccttttcctccttcacaaacccttcagctatccattttcgagttactctcttcgatttaacttcataatcc |
22180212 |
T |
|
| Q |
965 |
tctggatacattccaaaatataaca |
989 |
Q |
| |
|
|||||||| | ||||||||| |||| |
|
|
| T |
22180211 |
tctggatatactccaaaatacaaca |
22180187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 778 - 989
Target Start/End: Complemental strand, 22116066 - 22115855
Alignment:
| Q |
778 |
atcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaact |
877 |
Q |
| |
|
||||||||||| ||||| ||||| ||| ||||| ||||||| || |||||||| |||| ||||| | | ||||||||||||| |||||| ||||| ||| |
|
|
| T |
22116066 |
atcatgaacacgacaacctttagctttgccatcaattctaagcgaagatacttgaaccatacttctatggatcaactctgttatatatccctctgccact |
22115967 |
T |
|
| Q |
878 |
tcttccaaagtcttcccactttcctctttcacaaacccttcagctatccactgtagaatcactctctttgatttaacttcataatcttctggatacattc |
977 |
Q |
| |
|
|| |||| |||||| || |||||||| ||||||||||||||||||||||| ||| || | | ||||||||||||||||||| |||||||||| || | || |
|
|
| T |
22115966 |
tcatccatagtctttcccctttcctccttcacaaacccttcagctatccattgtcgagtgattctctttgatttaacttcaaaatcttctgggtatactc |
22115867 |
T |
|
| Q |
978 |
caaaatataaca |
989 |
Q |
| |
|
||||||| |||| |
|
|
| T |
22115866 |
caaaatacaaca |
22115855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 789 - 984
Target Start/End: Original strand, 22628033 - 22628226
Alignment:
| Q |
789 |
aacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagt |
888 |
Q |
| |
|
||||||||||| ||||||||| ||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||| |
|
|
| T |
22628033 |
aacaacttttaatttttccatcaattctaagtgacgatacttgcaccaaacttcgat-aatca-ctctgttaaatatccttctgtgacttcttcgaaagt |
22628130 |
T |
|
| Q |
889 |
cttcccactttcctctttcacaaacccttcagctatccactgtagaatcactctctttgatttaacttcataatcttctggatacattccaaaata |
984 |
Q |
| |
|
|| || ||||| ||||||||||| |||||||||||| | ||| |||||| ||||||||||| ||| ||||||| ||||||||| | ||||||||| |
|
|
| T |
22628131 |
ttttcccctttcttctttcacaaatccttcagctatcaattgtcgaatcaatctctttgattcaacctcataatattctggatatagtccaaaata |
22628226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 665 - 989
Target Start/End: Complemental strand, 22035611 - 22035287
Alignment:
| Q |
665 |
gttgttattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatca |
764 |
Q |
| |
|
||||||||||||| ||| | ||| |||||| ||| |||| || ||||| ||| | | ||||||||||||| | ||||||| | |||| |||||||| |
|
|
| T |
22035611 |
gttgttattgataagcgccgaattattccacctaaggatgtctgtccatcatcactaatatgcttgcaaaaattaaaatccttatttttttgaaggatca |
22035512 |
T |
|
| Q |
765 |
tcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaata |
864 |
Q |
| |
|
| ||||| | ||||||||||| ||||| ||||| ||| ||||| ||||||| ||||||||||| |||| |||| | | ||||||||| ||| ||| |
|
|
| T |
22035511 |
tatcgcgtattagatcatgaacacgacaacctttagctttgccatcaattctaagcgaggatacttgaaccaggcttctatggatcaactctattagata |
22035412 |
T |
|
| Q |
865 |
tccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatccactgtagaatcactctctttgatttaacttcataatct |
964 |
Q |
| |
|
||| || || | |||||||| ||||| || ||||||| |||| |||||||||||||||||| ||| || ||||||||||||||||||||||| ||||| |
|
|
| T |
22035411 |
tccctcagccagttcttccattgtctttcccttttcctccttcataaacccttcagctatccattgtcgagtcactctctttgatttaacttcaaaatct |
22035312 |
T |
|
| Q |
965 |
tctggatacattccaaaatataaca |
989 |
Q |
| |
|
|||||||| | ||||||||| |||| |
|
|
| T |
22035311 |
tctggatatactccaaaatacaaca |
22035287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 730 - 989
Target Start/End: Original strand, 22614708 - 22614967
Alignment:
| Q |
730 |
gcaaaaacttaaatcctcacacttttcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatact |
829 |
Q |
| |
|
||||||||||||||||| | | ||||||| |||||||| ||||| | ||||||||||| |||||||||| ||||||||| || ||| || || | | |
|
|
| T |
22614708 |
gcaaaaacttaaatccttaaatttttcaaagatcatcacacgtaatagatcatgaacacgacaacttttaacttttccatcaatattaatcgaagagatt |
22614807 |
T |
|
| Q |
830 |
tgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatccact |
929 |
Q |
| |
|
||||||||||||| | ||||||||||| |||||| ||| ||||||||||| || |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
22614808 |
tgcaccaaacttctattaatcaactctgataaataagtttccgcaacttcttctaatgtcttccccctttcctctttcacaaacccttcagctatccact |
22614907 |
T |
|
| Q |
930 |
gtagaatcactctctttgatttaacttcataatcttctggatacattccaaaatataaca |
989 |
Q |
| |
|
| ||| | | |||| |||| || |||||| |||||||| || | ||||||||| |||| |
|
|
| T |
22614908 |
gacgaagtagtatcttagattcaatttcatagtcttctgggtataatccaaaatacaaca |
22614967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 825 - 984
Target Start/End: Original strand, 18966519 - 18966678
Alignment:
| Q |
825 |
atacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctat |
924 |
Q |
| |
|
||||||||||||| |||| | | || |||||| ||| |||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
18966519 |
atacttgcaccaagcttctatggattaactctattaggaatccttctgcaatttcttccaaagtcttcccgctttcctccttcacaaacccttcagctat |
18966618 |
T |
|
| Q |
925 |
ccactgtagaatcactctctttgatttaacttcataatcttctggatacattccaaaata |
984 |
Q |
| |
|
||| ||| |||| |||| |||| | |||| ||||||||||| |||| | | ||||||||| |
|
|
| T |
18966619 |
ccattgtcgaattactcgctttaaattaatttcataatcttatggacatactccaaaata |
18966678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 727 - 927
Target Start/End: Original strand, 22467397 - 22467597
Alignment:
| Q |
727 |
cttgcaaaaacttaaatcctcacacttttcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggat |
826 |
Q |
| |
|
|||||||||||||||||||||| | || ||||||||||| | | | | ||||||||||| ||||||||| | ||||||| || || | ||| | |
|
|
| T |
22467397 |
cttgcaaaaacttaaatcctcatatttatcaaggatcattgcatgcactagatcatgaacacgacaactttttactcttccatcaatacttattgaaact |
22467496 |
T |
|
| Q |
827 |
acttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatcc |
926 |
Q |
| |
|
|||||||||||||||| | | ||||||||| ||||||||||||| ||||| |||||||| ||| |||| || || || ||||||||||||||||| |||| |
|
|
| T |
22467497 |
acttgcaccaaacttctatggatcaactctattaaatatccttcagcaacctcttccaatgtcctccccctgtcttccttcacaaacccttcagcaatcc |
22467596 |
T |
|
| Q |
927 |
a |
927 |
Q |
| |
|
| |
|
|
| T |
22467597 |
a |
22467597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 826 - 927
Target Start/End: Original strand, 22367469 - 22367570
Alignment:
| Q |
826 |
tacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatc |
925 |
Q |
| |
|
|||| |||||||||||| ||| ||||||||| |||||| |||||||||||| |||||||| ||| | || ||||| |||||||||||||||||||| ||| |
|
|
| T |
22367469 |
tactcgcaccaaacttctacggatcaactctattaaatgtccttctgcaacctcttccaatgtcattcccctttcttctttcacaaacccttcagcaatc |
22367568 |
T |
|
| Q |
926 |
ca |
927 |
Q |
| |
|
|| |
|
|
| T |
22367569 |
ca |
22367570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 670 - 927
Target Start/End: Original strand, 22457878 - 22458135
Alignment:
| Q |
670 |
tattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatcatcata |
769 |
Q |
| |
|
|||||||||||||| || | |||||||||||||| || |||| || | | || ||||||||||||||| || ||||| ||||||||||||| | |
|
|
| T |
22457878 |
tattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgca |
22457977 |
T |
|
| Q |
770 |
cgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaatatcctt |
869 |
Q |
| |
|
| | || ||||||||||||||||||||| | | ||||||| || |||| ||| |||||||||||||| || || ||||| |||||||||||||| | |
|
|
| T |
22457978 |
tgcaccagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatccat |
22458077 |
T |
|
| Q |
870 |
ctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatcca |
927 |
Q |
| |
|
||||||| |||||||| || || | | || ||||||||||| |||||||| ||||| |
|
|
| T |
22458078 |
ctgcaacatcttccaatgtttttaccatatcatctttcacaaatccttcagccatcca |
22458135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 670 - 927
Target Start/End: Original strand, 22480859 - 22481116
Alignment:
| Q |
670 |
tattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatcatcata |
769 |
Q |
| |
|
|||||||||||||| || | |||||||||||||| || |||| || | | || ||||||||||||||| || ||||| ||||||||||||| | |
|
|
| T |
22480859 |
tattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgca |
22480958 |
T |
|
| Q |
770 |
cgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaatatcctt |
869 |
Q |
| |
|
| | || ||||||||||||||||||||| | | ||||||| || |||| ||| |||||||||||||| || || ||||| |||||||||||||| | |
|
|
| T |
22480959 |
tgcaccagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatccat |
22481058 |
T |
|
| Q |
870 |
ctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatcca |
927 |
Q |
| |
|
||||||| |||||||| || || | | || ||||||||||| |||||||| ||||| |
|
|
| T |
22481059 |
ctgcaacatcttccaatgtttttaccatatcatctttcacaaatccttcagccatcca |
22481116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 826 - 927
Target Start/End: Original strand, 22430715 - 22430816
Alignment:
| Q |
826 |
tacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatc |
925 |
Q |
| |
|
||||||||||||||||| | | ||||||||| ||||||||||||||||||| |||| ||| ||| | || ||| |||||||||||||||||||| ||| |
|
|
| T |
22430715 |
tacttgcaccaaacttctatggatcaactctattaaatatccttctgcaacctctttcaatgtccttcccgttttttctttcacaaacccttcagcaatc |
22430814 |
T |
|
| Q |
926 |
ca |
927 |
Q |
| |
|
|| |
|
|
| T |
22430815 |
ca |
22430816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 221
Target Start/End: Original strand, 22619689 - 22619818
Alignment:
| Q |
92 |
ttctccaagtgtcgcatctcattcagtgaggaagatagagcgcttgaatgttctgccgccacataaaacaagctcaacttccttaactgtctgaactttc |
191 |
Q |
| |
|
|||||||||||||||| |||||||| | |||||||| ||||||| ||||||| ||| || ||| | ||| ||||||||||| || ||||||| |
|
|
| T |
22619689 |
ttctccaagtgtcgcagctcattcaatacggaagataaagcgcttccatgttctcttctaacaccaaccaaacccaatttccttaactgcctcaactttc |
22619788 |
T |
|
| Q |
192 |
ccaactctttaattaactctattccatcct |
221 |
Q |
| |
|
||||||| |||||||||||||||||||||| |
|
|
| T |
22619789 |
ccaactccttaattaactctattccatcct |
22619818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 826 - 927
Target Start/End: Original strand, 22635051 - 22635152
Alignment:
| Q |
826 |
tacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatc |
925 |
Q |
| |
|
||||||||||||||||| | | ||||||||| |||||||||||||||||| ||||| || ||| | || || || |||||||| ||||||||||| ||| |
|
|
| T |
22635051 |
tacttgcaccaaacttctatggatcaactctactaaatatccttctgcaacctcttcaaatgtccttcccctgtcttctttcacgaacccttcagcaatc |
22635150 |
T |
|
| Q |
926 |
ca |
927 |
Q |
| |
|
|| |
|
|
| T |
22635151 |
ca |
22635152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 727 - 927
Target Start/End: Original strand, 22436077 - 22436277
Alignment:
| Q |
727 |
cttgcaaaaacttaaatcctcacacttttcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggat |
826 |
Q |
| |
|
|||||||||||||||||||||| | || ||||||||||| | | | ||||||||||||| ||||||||| | ||||||| || || | ||| | |
|
|
| T |
22436077 |
cttgcaaaaacttaaatcctcatatttctcaaggatcattgcatgcactaaatcatgaacacgacaactttttactcttccatcaatacttattgaaact |
22436176 |
T |
|
| Q |
827 |
acttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatcc |
926 |
Q |
| |
|
|| ||||||||||||| | | ||||||| |||||||||||| ||||| |||||||| ||| | || || || |||||||| ||||||||||| |||| |
|
|
| T |
22436177 |
acatgcaccaaacttctattgaccaactctattaaatatccttttgcaatatcttccaatgtccttcccctctcttctttcacgaacccttcagcaatcc |
22436276 |
T |
|
| Q |
927 |
a |
927 |
Q |
| |
|
| |
|
|
| T |
22436277 |
a |
22436277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 826 - 927
Target Start/End: Original strand, 22629986 - 22630087
Alignment:
| Q |
826 |
tacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaag-tcttcccactttcctctttcacaaacccttcagctat |
924 |
Q |
| |
|
||||||||||||||||| ||| | ||||||| |||||||||||||| |||| |||||||| | ||||||| | | |||||||||||||||||||| || |
|
|
| T |
22629986 |
tacttgcaccaaacttctacggaccaactctattaaatatccttctccaacctcttccaatgttcttccc-ttgacttctttcacaaacccttcagcgat |
22630084 |
T |
|
| Q |
925 |
cca |
927 |
Q |
| |
|
||| |
|
|
| T |
22630085 |
cca |
22630087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 727 - 884
Target Start/End: Original strand, 22353258 - 22353415
Alignment:
| Q |
727 |
cttgcaaaaacttaaatcctcacacttttcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggat |
826 |
Q |
| |
|
|||||||||||||||||||||| | ||| ||||||||| | | | | ||| ||||||| ||||||||| | ||||||| || || ||||| | |
|
|
| T |
22353258 |
cttgcaaaaacttaaatcctcatattttctaaggatcatttcatgcactagatcgtgaacacgacaactttttactcttccatcaatactgactgaatct |
22353357 |
T |
|
| Q |
827 |
acttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttcca |
884 |
Q |
| |
|
|||||||||||||||| | | || |||||| ||||||||||||||||||| ||||||| |
|
|
| T |
22353358 |
acttgcaccaaacttctatggattaactcttttaaatatccttctgcaacctcttcca |
22353415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 826 - 984
Target Start/End: Original strand, 22357547 - 22357705
Alignment:
| Q |
826 |
tacttgcaccaaacttcgacgaatcaactctgttaaatatccttctgcaacttcttccaaag-tcttcccactttcctctttcacaaacccttcagctat |
924 |
Q |
| |
|
||||||||||||||||| | | || |||||| ||||||||||||||||||| ||||||| | |||| || | | | |||||||||||||||||| || |
|
|
| T |
22357547 |
tacttgcaccaaacttctatgtattaactcttttaaatatccttctgcaacctcttccatcgttctttcc-ccatattgtttcacaaacccttcagcaat |
22357645 |
T |
|
| Q |
925 |
ccactgtagaatcactctctttgatttaacttcataatcttctggatacattccaaaata |
984 |
Q |
| |
|
||| ||| || ||| | ||||||| | ||||| ||| ||||| ||||| | ||||||||| |
|
|
| T |
22357646 |
ccattgtcgagtcaatgtctttgaatgaactttatagtcttcaggatataatccaaaata |
22357705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 30988333 - 30988378
Alignment:
| Q |
303 |
tgcccataagatggcgtagctttctaagcttgctaatctcctttgg |
348 |
Q |
| |
|
|||| |||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
30988333 |
tgccgataagatgtcttagctttctaagcttgctaatctcctttgg |
30988378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 348
Target Start/End: Complemental strand, 22054145 - 22054102
Alignment:
| Q |
305 |
cccataagatggcgtagctttctaagcttgctaatctcctttgg |
348 |
Q |
| |
|
||||||||||| | ||||||||||||||| |||||||||||||| |
|
|
| T |
22054145 |
cccataagatgtcttagctttctaagcttcctaatctcctttgg |
22054102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 22466989 - 22467024
Alignment:
| Q |
313 |
atggcgtagctttctaagcttgctaatctcctttgg |
348 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |
|
|
| T |
22466989 |
atggcgtagctttctaagcttgcaaatctcctttgg |
22467024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 21931859 - 21931814
Alignment:
| Q |
303 |
tgcccataagatggcgtagctttctaagcttgctaatctcctttgg |
348 |
Q |
| |
|
|||| |||||||| | ||||||||||||||| |||||||||||||| |
|
|
| T |
21931859 |
tgccgataagatgtcttagctttctaagcttcctaatctcctttgg |
21931814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 22029444 - 22029399
Alignment:
| Q |
303 |
tgcccataagatggcgtagctttctaagcttgctaatctcctttgg |
348 |
Q |
| |
|
|||| |||||||| | ||||||||||||||| |||||||||||||| |
|
|
| T |
22029444 |
tgccgataagatgtcttagctttctaagcttcctaatctcctttgg |
22029399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 319 - 348
Target Start/End: Complemental strand, 22035942 - 22035913
Alignment:
| Q |
319 |
tagctttctaagcttgctaatctcctttgg |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
22035942 |
tagctttctaagcttgctaatctcctttgg |
22035913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 319 - 348
Target Start/End: Complemental strand, 22116510 - 22116481
Alignment:
| Q |
319 |
tagctttctaagcttgctaatctcctttgg |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
22116510 |
tagctttctaagcttgctaatctcctttgg |
22116481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 22188432 - 22188387
Alignment:
| Q |
303 |
tgcccataagatggcgtagctttctaagcttgctaatctcctttgg |
348 |
Q |
| |
|
|||| |||||||| | ||||||||||||||| |||||||||||||| |
|
|
| T |
22188432 |
tgccgataagatgtcttagctttctaagcttcctaatctcctttgg |
22188387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 82; Significance: 3e-38; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 648 - 984
Target Start/End: Original strand, 872079 - 872416
Alignment:
| Q |
648 |
tgaaatcaccggaactagttgttattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctc |
747 |
Q |
| |
|
|||||||| | ||| ||||||||| |||||| || | ||| ||| ||||| ||||| || || |||||| | | ||||||||||||| |||||||||| |
|
|
| T |
872079 |
tgaaatcatcagaagtagttgttactgatagccgccgaattattcaccttaaggatgattgtccctcttcactaatatgcttgcaaaaatttaaatcctc |
872178 |
T |
|
| Q |
748 |
acacttttcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacga |
847 |
Q |
| |
|
| | ||||||||||||| | ||| | ||||||||||| |||| ||||| ||| ||||| | || || ||| |||||||||||||| || | | |
|
|
| T |
872179 |
aaatttttcaaggatcaaatcatgtagtagatcatgaacacgacaaactttagctttaccatcaactccaagtgatgatacttgcaccaagaatctatgg |
872278 |
T |
|
| Q |
848 |
atcaactctgttaaatatccttctgcaacttcttccaaagtcttcccac-tttcctctttcacaaacccttcagctatccactgtagaatcactctcttt |
946 |
Q |
| |
|
|| ||||| | ||||||||||||||||| ||||||| ||||||| || | ||||||| |||||||||||||||||||||||| || ||||||| | |||| |
|
|
| T |
872279 |
ataaactcggctaaatatccttctgcaaattcttcccaagtctttcctcctttcctccttcacaaacccttcagctatccaccgtcgaatcacccacttt |
872378 |
T |
|
| Q |
947 |
gatttaacttcataatcttctggatacattccaaaata |
984 |
Q |
| |
|
|||||||||| ||| ||| |||||| ||||||||||| |
|
|
| T |
872379 |
gatttaactttctaaccttatggatatattccaaaata |
872416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 648 - 984
Target Start/End: Original strand, 1233356 - 1233693
Alignment:
| Q |
648 |
tgaaatcaccggaactagttgttattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctc |
747 |
Q |
| |
|
|||||||| | ||| ||||||||| |||||| || | ||| ||| ||||| ||||| || || |||||| | | ||||||||||||| |||||||||| |
|
|
| T |
1233356 |
tgaaatcatcagaagtagttgttactgatagccgccgaattattcaccttaaggatgattgtccctcttcactaatatgcttgcaaaaatttaaatcctc |
1233455 |
T |
|
| Q |
748 |
acacttttcaaggatcatcatacgtatcaaatcatgaacacaacaacttttagattttccatctattctaactgaggatacttgcaccaaacttcgacga |
847 |
Q |
| |
|
| | ||||||||||||| | ||| | ||||||||||| |||| ||||| ||| ||||| | || || ||| |||||||||||||| || | | |
|
|
| T |
1233456 |
aaatttttcaaggatcaaatcatgtagtagatcatgaacacgacaaactttagctttaccatcaactccaagtgatgatacttgcaccaagaatctatgg |
1233555 |
T |
|
| Q |
848 |
atcaactctgttaaatatccttctgcaacttcttccaaagtcttcccac-tttcctctttcacaaacccttcagctatccactgtagaatcactctcttt |
946 |
Q |
| |
|
|| ||||| | ||||||||||||||||| ||||||| ||||||| || | ||||||| |||||||||||||||||||||||| || ||||||| | |||| |
|
|
| T |
1233556 |
ataaactcggctaaatatccttctgcaaattcttcccaagtctttcctcctttcctccttcacaaacccttcagctatccaccgtcgaatcacccacttt |
1233655 |
T |
|
| Q |
947 |
gatttaacttcataatcttctggatacattccaaaata |
984 |
Q |
| |
|
|||||||||| ||| ||| |||||| ||||||||||| |
|
|
| T |
1233656 |
gatttaactttctaaccttatggatatattccaaaata |
1233693 |
T |
|
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