View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11279_low_32 (Length: 282)

Name: NF11279_low_32
Description: NF11279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11279_low_32
NF11279_low_32
[»] chr3 (61 HSPs)
chr3 (1-282)||(28812301-28812582)
chr3 (177-275)||(34910279-34910377)
chr3 (180-282)||(14209079-14209180)
chr3 (207-274)||(10954944-10955011)
chr3 (207-276)||(28917993-28918062)
chr3 (178-272)||(20503429-20503522)
chr3 (210-274)||(55401070-55401134)
chr3 (207-282)||(4987283-4987358)
chr3 (199-282)||(14829673-14829756)
chr3 (199-274)||(16000016-16000092)
chr3 (207-271)||(26508102-26508166)
chr3 (207-274)||(8587021-8587088)
chr3 (207-282)||(15796286-15796361)
chr3 (207-274)||(21479110-21479177)
chr3 (199-277)||(41961647-41961726)
chr3 (207-277)||(34185120-34185190)
chr3 (207-277)||(49651783-49651853)
chr3 (215-275)||(1509539-1509599)
chr3 (207-274)||(10335286-10335353)
chr3 (207-278)||(14216884-14216955)
chr3 (207-278)||(14223013-14223084)
chr3 (215-274)||(51206353-51206412)
chr3 (207-277)||(750615-750685)
chr3 (207-273)||(10268487-10268553)
chr3 (207-277)||(14832091-14832161)
chr3 (206-276)||(21256984-21257054)
chr3 (207-277)||(27505238-27505308)
chr3 (177-273)||(22774071-22774167)
chr3 (207-268)||(35994744-35994804)
chr3 (207-267)||(11610513-11610573)
chr3 (207-274)||(25775500-25775568)
chr3 (176-250)||(40052294-40052367)
chr3 (207-274)||(8383249-8383316)
chr3 (207-277)||(14747553-14747624)
chr3 (222-277)||(25948884-25948939)
chr3 (207-274)||(26492205-26492272)
chr3 (207-281)||(4990960-4991034)
chr3 (209-255)||(14979175-14979221)
chr3 (216-282)||(17005611-17005677)
chr3 (207-277)||(39756228-39756298)
chr3 (213-274)||(7928448-7928509)
chr3 (209-277)||(3164022-3164090)
chr3 (222-274)||(38731225-38731277)
chr3 (207-274)||(18426941-18427008)
chr3 (207-277)||(9800032-9800102)
chr3 (215-281)||(15314869-15314935)
chr3 (215-274)||(8593136-8593196)
chr3 (207-255)||(12703999-12704047)
chr3 (212-272)||(55212960-55213020)
chr3 (207-282)||(8039827-8039902)
chr3 (207-274)||(35222930-35222997)
chr3 (176-211)||(37991464-37991499)
chr3 (223-277)||(16789020-16789074)
chr3 (177-274)||(33359722-33359820)
chr3 (199-268)||(34307786-34307856)
chr3 (222-279)||(11665951-11666008)
chr3 (207-268)||(29508436-29508497)
chr3 (207-255)||(2620072-2620120)
chr3 (207-255)||(11493380-11493428)
chr3 (207-255)||(25064901-25064949)
chr3 (177-274)||(40993335-40993432)
[»] chr8 (50 HSPs)
chr8 (207-282)||(15816121-15816196)
chr8 (177-274)||(36450754-36450851)
chr8 (215-282)||(25566841-25566908)
chr8 (206-277)||(2572053-2572124)
chr8 (207-282)||(22651968-22652043)
chr8 (176-272)||(40332154-40332248)
chr8 (207-282)||(13436956-13437031)
chr8 (207-282)||(29510296-29510371)
chr8 (220-274)||(4948657-4948711)
chr8 (176-275)||(8342929-8343032)
chr8 (177-274)||(22595950-22596053)
chr8 (206-282)||(29447102-29447178)
chr8 (207-274)||(20873061-20873128)
chr8 (207-274)||(24613513-24613579)
chr8 (207-277)||(30271288-30271358)
chr8 (207-273)||(31556989-31557054)
chr8 (208-273)||(4298887-4298952)
chr8 (206-275)||(8343307-8343376)
chr8 (210-282)||(11927078-11927150)
chr8 (199-274)||(24669416-24669492)
chr8 (207-274)||(5813584-5813651)
chr8 (207-274)||(18170482-18170549)
chr8 (207-274)||(18634050-18634117)
chr8 (207-274)||(30077387-30077454)
chr8 (199-279)||(4673420-4673501)
chr8 (177-273)||(14134661-14134757)
chr8 (207-268)||(18407711-18407772)
chr8 (189-277)||(21465388-21465474)
chr8 (208-273)||(22197743-22197808)
chr8 (207-268)||(41831946-41832007)
chr8 (180-274)||(13844596-13844689)
chr8 (207-271)||(25192350-25192414)
chr8 (207-274)||(4786338-4786405)
chr8 (208-279)||(11944658-11944729)
chr8 (214-277)||(17468505-17468568)
chr8 (206-243)||(24196628-24196665)
chr8 (206-282)||(24362194-24362270)
chr8 (207-271)||(31236580-31236644)
chr8 (215-277)||(16641971-16642033)
chr8 (222-273)||(20679396-20679447)
chr8 (207-277)||(24858001-24858073)
chr8 (207-274)||(34897077-34897144)
chr8 (207-266)||(41838131-41838190)
chr8 (210-272)||(7658458-7658520)
chr8 (207-253)||(27101507-27101553)
chr8 (215-272)||(31514872-31514930)
chr8 (206-276)||(39954277-39954347)
chr8 (214-275)||(7472514-7472575)
chr8 (222-274)||(3025558-3025610)
chr8 (222-282)||(28745505-28745565)
[»] chr7 (54 HSPs)
chr7 (207-282)||(24339634-24339709)
chr7 (177-277)||(18215183-18215283)
chr7 (207-274)||(8234138-8234205)
chr7 (207-274)||(25481894-25481961)
chr7 (213-275)||(3991322-3991384)
chr7 (207-277)||(27945033-27945103)
chr7 (195-275)||(9408333-9408414)
chr7 (210-282)||(11272578-11272652)
chr7 (207-277)||(5409833-5409903)
chr7 (207-275)||(25822647-25822715)
chr7 (222-282)||(26033453-26033513)
chr7 (207-282)||(7438698-7438773)
chr7 (207-282)||(11665432-11665507)
chr7 (210-277)||(13770686-13770753)
chr7 (208-275)||(35861957-35862024)
chr7 (177-274)||(7197297-7197394)
chr7 (215-277)||(9778500-9778562)
chr7 (207-273)||(11061077-11061143)
chr7 (216-277)||(32094017-32094079)
chr7 (207-277)||(43027466-43027536)
chr7 (207-275)||(21560490-21560563)
chr7 (223-282)||(18039006-18039066)
chr7 (207-282)||(6630904-6630979)
chr7 (218-277)||(7058429-7058488)
chr7 (185-264)||(11831402-11831481)
chr7 (207-274)||(24105670-24105737)
chr7 (207-270)||(40287361-40287423)
chr7 (177-274)||(15680771-15680868)
chr7 (208-274)||(28155563-28155629)
chr7 (207-273)||(33994204-33994270)
chr7 (215-275)||(19992001-19992061)
chr7 (222-274)||(21880159-21880211)
chr7 (178-277)||(25791616-25791714)
chr7 (215-282)||(13300410-13300477)
chr7 (207-282)||(32308112-32308187)
chr7 (208-282)||(19206043-19206117)
chr7 (207-261)||(29763187-29763241)
chr7 (229-282)||(1885587-1885640)
chr7 (236-277)||(2334271-2334312)
chr7 (208-277)||(10042930-10042999)
chr7 (199-265)||(13557750-13557820)
chr7 (222-274)||(19213810-19213862)
chr7 (207-255)||(22868034-22868082)
chr7 (210-273)||(5835242-5835305)
chr7 (199-277)||(15902805-15902884)
chr7 (207-274)||(20549783-20549850)
chr7 (207-274)||(26733296-26733363)
chr7 (208-255)||(29787388-29787435)
chr7 (223-277)||(11890916-11890970)
chr7 (215-277)||(18013071-18013133)
chr7 (208-274)||(21826266-21826332)
chr7 (207-277)||(22602707-22602777)
chr7 (207-272)||(41020488-41020553)
chr7 (229-273)||(48438560-48438604)
[»] chr6 (67 HSPs)
chr6 (177-277)||(10770671-10770776)
chr6 (207-282)||(16766689-16766764)
chr6 (207-274)||(34595126-34595193)
chr6 (208-274)||(7801156-7801222)
chr6 (207-277)||(8365516-8365586)
chr6 (208-282)||(9107362-9107436)
chr6 (199-272)||(16833291-16833365)
chr6 (207-274)||(853859-853926)
chr6 (207-274)||(7977830-7977897)
chr6 (207-274)||(8776973-8777040)
chr6 (207-277)||(12696316-12696386)
chr6 (177-274)||(17841589-17841686)
chr6 (178-274)||(28152062-28152157)
chr6 (208-268)||(1681751-1681811)
chr6 (218-277)||(31384923-31384982)
chr6 (207-280)||(3398611-3398683)
chr6 (207-274)||(426514-426581)
chr6 (207-282)||(5970100-5970175)
chr6 (207-277)||(7930297-7930367)
chr6 (207-273)||(7938108-7938174)
chr6 (216-277)||(9911525-9911587)
chr6 (207-269)||(31959151-31959213)
chr6 (208-273)||(15489733-15489798)
chr6 (207-274)||(3209373-3209441)
chr6 (222-282)||(9522898-9522958)
chr6 (214-273)||(24645479-24645539)
chr6 (222-274)||(28715302-28715354)
chr6 (207-274)||(32978899-32978967)
chr6 (207-274)||(6898281-6898348)
chr6 (207-277)||(17302548-17302619)
chr6 (211-268)||(1191706-1191763)
chr6 (207-274)||(4877934-4878002)
chr6 (207-282)||(8713971-8714047)
chr6 (223-274)||(403864-403915)
chr6 (207-274)||(7265593-7265660)
chr6 (222-277)||(9025491-9025546)
chr6 (207-274)||(19040344-19040411)
chr6 (206-277)||(21395305-21395375)
chr6 (207-282)||(26562681-26562756)
chr6 (207-274)||(33001289-33001356)
chr6 (207-277)||(9027170-9027240)
chr6 (207-273)||(19044456-19044522)
chr6 (207-255)||(10842524-10842572)
chr6 (207-267)||(17341671-17341731)
chr6 (202-282)||(18367823-18367903)
chr6 (215-255)||(34225828-34225868)
chr6 (207-274)||(9629375-9629442)
chr6 (207-250)||(24115871-24115914)
chr6 (207-277)||(34290076-34290144)
chr6 (207-277)||(2117068-2117137)
chr6 (222-276)||(7151419-7151473)
chr6 (208-282)||(8931594-8931668)
chr6 (207-273)||(13360373-13360439)
chr6 (177-266)||(17435162-17435250)
chr6 (214-264)||(25010212-25010262)
chr6 (225-274)||(1700362-1700411)
chr6 (210-274)||(7027236-7027301)
chr6 (207-272)||(9658871-9658936)
chr6 (218-275)||(10827560-10827617)
chr6 (207-273)||(27904037-27904105)
chr6 (223-272)||(32299283-32299332)
chr6 (222-282)||(9195746-9195806)
chr6 (223-275)||(9617442-9617494)
chr6 (210-274)||(21924935-21924999)
chr6 (176-282)||(28862082-28862189)
chr6 (222-274)||(32511666-32511718)
chr6 (222-282)||(34073339-34073399)
[»] chr1 (77 HSPs)
chr1 (207-277)||(24577183-24577253)
chr1 (207-274)||(22881616-22881683)
chr1 (207-277)||(113291-113361)
chr1 (177-274)||(37598793-37598890)
chr1 (178-274)||(46348383-46348479)
chr1 (199-282)||(47989481-47989564)
chr1 (206-277)||(1704989-1705060)
chr1 (215-282)||(6332671-6332737)
chr1 (207-277)||(1486706-1486776)
chr1 (192-277)||(9828021-9828106)
chr1 (213-273)||(40258934-40258994)
chr1 (207-274)||(22515887-22515954)
chr1 (207-274)||(38078661-38078728)
chr1 (207-274)||(42359449-42359516)
chr1 (207-273)||(1815249-1815315)
chr1 (207-277)||(6612168-6612238)
chr1 (177-267)||(14359529-14359623)
chr1 (169-274)||(51409973-51410084)
chr1 (207-282)||(10572581-10572656)
chr1 (207-274)||(19058856-19058923)
chr1 (177-273)||(28273089-28273190)
chr1 (207-274)||(31672895-31672962)
chr1 (199-277)||(5944264-5944345)
chr1 (224-274)||(18337338-18337388)
chr1 (207-272)||(21378570-21378635)
chr1 (177-272)||(32434718-32434815)
chr1 (207-272)||(32461465-32461530)
chr1 (207-282)||(40917743-40917816)
chr1 (182-276)||(18556454-18556548)
chr1 (215-273)||(18190109-18190167)
chr1 (211-269)||(31015039-31015097)
chr1 (207-273)||(36878453-36878519)
chr1 (207-269)||(48450592-48450654)
chr1 (208-277)||(5376497-5376566)
chr1 (215-282)||(17778549-17778613)
chr1 (207-255)||(398784-398832)
chr1 (207-255)||(12443479-12443527)
chr1 (210-282)||(25361881-25361953)
chr1 (177-274)||(35702588-35702691)
chr1 (210-274)||(41877470-41877534)
chr1 (207-277)||(6427453-6427526)
chr1 (207-274)||(9103632-9103698)
chr1 (222-282)||(31694702-31694764)
chr1 (186-273)||(43492495-43492582)
chr1 (207-273)||(2896122-2896188)
chr1 (207-277)||(7918208-7918278)
chr1 (208-274)||(13436451-13436517)
chr1 (236-282)||(34371734-34371780)
chr1 (208-277)||(35919273-35919347)
chr1 (225-282)||(44482240-44482297)
chr1 (177-273)||(5898267-5898368)
chr1 (207-266)||(13011223-13011283)
chr1 (202-274)||(14332642-14332714)
chr1 (211-274)||(21620946-21621014)
chr1 (213-253)||(23738676-23738716)
chr1 (207-255)||(34298428-34298476)
chr1 (207-250)||(1262876-1262919)
chr1 (213-272)||(1864882-1864941)
chr1 (222-277)||(9629897-9629952)
chr1 (214-270)||(18471297-18471355)
chr1 (207-277)||(6427342-6427412)
chr1 (227-277)||(25272494-25272544)
chr1 (199-268)||(30359371-30359441)
chr1 (240-277)||(2218264-2218301)
chr1 (207-268)||(3490396-3490457)
chr1 (207-272)||(13997875-13997940)
chr1 (223-280)||(15323171-15323228)
chr1 (226-275)||(15449231-15449279)
chr1 (206-255)||(21366039-21366088)
chr1 (210-267)||(29144365-29144422)
chr1 (236-277)||(30173759-30173800)
chr1 (222-274)||(5927340-5927392)
chr1 (207-255)||(17754303-17754351)
chr1 (207-255)||(17831550-17831598)
chr1 (242-274)||(24334705-24334737)
chr1 (222-274)||(40181878-40181930)
chr1 (222-282)||(40285646-40285706)
[»] chr5 (56 HSPs)
chr5 (177-269)||(14674231-14674323)
chr5 (207-274)||(6247614-6247681)
chr5 (207-274)||(21191056-21191123)
chr5 (207-274)||(33178017-33178084)
chr5 (207-282)||(39698533-39698608)
chr5 (207-277)||(31084315-31084385)
chr5 (208-275)||(10298562-10298629)
chr5 (207-282)||(21351897-21351972)
chr5 (207-282)||(21522742-21522817)
chr5 (207-282)||(21533308-21533383)
chr5 (207-282)||(21542022-21542097)
chr5 (207-273)||(42893352-42893418)
chr5 (213-282)||(7677703-7677772)
chr5 (208-277)||(13287396-13287465)
chr5 (212-281)||(30183546-30183615)
chr5 (210-274)||(21576745-21576809)
chr5 (206-273)||(30135304-30135372)
chr5 (207-274)||(8420019-8420086)
chr5 (210-277)||(19579696-19579763)
chr5 (177-282)||(6035445-6035549)
chr5 (207-275)||(41633727-41633795)
chr5 (207-270)||(7218271-7218334)
chr5 (207-270)||(24906305-24906368)
chr5 (177-271)||(43001762-43001856)
chr5 (207-266)||(4105249-4105310)
chr5 (207-274)||(15382469-15382538)
chr5 (199-271)||(41995454-41995525)
chr5 (210-274)||(15883982-15884047)
chr5 (213-282)||(37328836-37328905)
chr5 (202-277)||(5894830-5894903)
chr5 (215-267)||(15405062-15405114)
chr5 (207-282)||(19552537-19552610)
chr5 (207-274)||(28588674-28588741)
chr5 (207-277)||(3966495-3966565)
chr5 (236-282)||(12199951-12199997)
chr5 (210-272)||(17177025-17177087)
chr5 (199-255)||(27144446-27144503)
chr5 (218-275)||(40131624-40131681)
chr5 (202-262)||(27932222-27932282)
chr5 (207-274)||(43564875-43564940)
chr5 (177-277)||(2436878-2436984)
chr5 (222-277)||(6471886-6471941)
chr5 (207-250)||(22611761-22611804)
chr5 (207-282)||(36642754-36642829)
chr5 (175-255)||(9449429-9449509)
chr5 (206-255)||(14574068-14574117)
chr5 (206-255)||(35017028-35017077)
chr5 (206-267)||(38464371-38464432)
chr5 (207-267)||(6326304-6326364)
chr5 (215-255)||(6770543-6770583)
chr5 (214-270)||(12159951-12160007)
chr5 (215-282)||(17088284-17088352)
chr5 (207-255)||(22013406-22013454)
chr5 (222-274)||(30502388-30502440)
chr5 (222-274)||(30542731-30542783)
chr5 (222-278)||(36838550-36838606)
[»] chr2 (49 HSPs)
chr2 (199-278)||(36756340-36756420)
chr2 (177-274)||(37558939-37559036)
chr2 (207-274)||(19536397-19536465)
chr2 (208-279)||(15657857-15657928)
chr2 (214-280)||(974746-974812)
chr2 (207-277)||(12668420-12668490)
chr2 (177-282)||(37419704-37419810)
chr2 (207-274)||(15972865-15972932)
chr2 (207-274)||(18421955-18422022)
chr2 (207-273)||(18841014-18841080)
chr2 (207-276)||(20539672-20539741)
chr2 (209-274)||(30335411-30335476)
chr2 (177-274)||(30404850-30404952)
chr2 (210-274)||(2438719-2438783)
chr2 (207-282)||(23058434-23058510)
chr2 (213-277)||(30717527-30717591)
chr2 (207-282)||(11223855-11223930)
chr2 (208-267)||(21374706-21374765)
chr2 (207-274)||(38117159-38117226)
chr2 (207-277)||(33153416-33153486)
chr2 (199-274)||(20473305-20473381)
chr2 (207-277)||(24894381-24894451)
chr2 (207-273)||(26769503-26769569)
chr2 (221-274)||(5367198-5367251)
chr2 (215-268)||(12940941-12940994)
chr2 (199-274)||(21624249-21624326)
chr2 (222-282)||(44860327-44860387)
chr2 (207-270)||(6940247-6940310)
chr2 (207-273)||(14996224-14996291)
chr2 (207-274)||(20242727-20242794)
chr2 (212-274)||(5040729-5040793)
chr2 (207-279)||(21782815-21782885)
chr2 (210-255)||(28677904-28677949)
chr2 (222-282)||(4882688-4882748)
chr2 (207-255)||(21616754-21616802)
chr2 (207-277)||(18420431-18420501)
chr2 (207-277)||(34784979-34785049)
chr2 (207-273)||(42832277-42832343)
chr2 (199-262)||(29367381-29367446)
chr2 (217-274)||(38442309-38442366)
chr2 (222-267)||(39323271-39323316)
chr2 (237-274)||(44635520-44635557)
chr2 (177-233)||(18422526-18422582)
chr2 (221-277)||(18622612-18622668)
chr2 (207-271)||(23718018-23718082)
chr2 (207-271)||(24105690-24105754)
chr2 (208-272)||(29176495-29176559)
chr2 (222-274)||(34691805-34691857)
chr2 (222-274)||(34714217-34714269)
[»] scaffold0223 (1 HSPs)
scaffold0223 (207-282)||(20164-20239)
[»] chr4 (51 HSPs)
chr4 (178-277)||(12895113-12895211)
chr4 (185-274)||(54580023-54580111)
chr4 (199-277)||(19482651-19482730)
chr4 (207-274)||(23292986-23293053)
chr4 (199-274)||(21945486-21945562)
chr4 (199-277)||(3947763-3947842)
chr4 (207-274)||(12797338-12797404)
chr4 (179-276)||(30298910-30299008)
chr4 (179-276)||(30327778-30327876)
chr4 (182-277)||(11596349-11596445)
chr4 (177-271)||(24543942-24544038)
chr4 (206-282)||(24613693-24613769)
chr4 (207-274)||(49431017-49431085)
chr4 (207-282)||(4383360-4383434)
chr4 (207-274)||(12895274-12895341)
chr4 (207-274)||(16073387-16073453)
chr4 (207-266)||(40481629-40481687)
chr4 (222-272)||(29205451-29205501)
chr4 (207-273)||(35157986-35158052)
chr4 (208-272)||(6485613-6485677)
chr4 (207-282)||(28084513-28084589)
chr4 (222-274)||(28964248-28964300)
chr4 (210-274)||(34306804-34306867)
chr4 (206-274)||(38847012-38847080)
chr4 (207-274)||(42640518-42640588)
chr4 (207-274)||(2361975-2362042)
chr4 (215-274)||(4157150-4157208)
chr4 (207-278)||(27706173-27706244)
chr4 (207-277)||(50280873-50280945)
chr4 (207-277)||(12708138-12708209)
chr4 (192-251)||(32273549-32273608)
chr4 (207-282)||(47263978-47264053)
chr4 (215-282)||(51701258-51701325)
chr4 (208-273)||(715608-715674)
chr4 (208-273)||(752934-753000)
chr4 (207-277)||(16303263-16303333)
chr4 (213-274)||(8423718-8423779)
chr4 (222-282)||(847958-848018)
chr4 (210-274)||(4672085-4672149)
chr4 (207-282)||(22234882-22234958)
chr4 (222-282)||(30982870-30982930)
chr4 (207-255)||(36635316-36635364)
chr4 (207-266)||(11651142-11651201)
chr4 (207-274)||(15029757-15029824)
chr4 (236-274)||(6879465-6879503)
chr4 (207-269)||(40613442-40613504)
chr4 (216-261)||(14465088-14465133)
chr4 (206-275)||(31800477-31800546)
chr4 (237-273)||(28000743-28000779)
chr4 (222-266)||(37203271-37203315)
chr4 (222-282)||(38148717-38148777)
[»] scaffold0361 (1 HSPs)
scaffold0361 (207-265)||(14522-14580)
[»] scaffold0011 (1 HSPs)
scaffold0011 (208-273)||(17750-17815)
[»] scaffold0306 (1 HSPs)
scaffold0306 (207-274)||(13392-13459)
[»] scaffold0152 (1 HSPs)
scaffold0152 (207-274)||(21868-21935)
[»] scaffold0103 (1 HSPs)
scaffold0103 (207-266)||(51803-51862)
[»] scaffold0027 (1 HSPs)
scaffold0027 (207-274)||(46674-46741)
[»] scaffold0018 (2 HSPs)
scaffold0018 (207-273)||(178819-178886)
scaffold0018 (207-267)||(192256-192316)
[»] scaffold0003 (1 HSPs)
scaffold0003 (207-282)||(241586-241661)
[»] scaffold0652 (1 HSPs)
scaffold0652 (210-274)||(462-526)
[»] scaffold0246 (1 HSPs)
scaffold0246 (207-266)||(19568-19626)
[»] scaffold0136 (1 HSPs)
scaffold0136 (223-282)||(3841-3900)
[»] scaffold0122 (1 HSPs)
scaffold0122 (207-274)||(8002-8068)
[»] scaffold0053 (1 HSPs)
scaffold0053 (207-274)||(8790-8857)
[»] scaffold0450 (1 HSPs)
scaffold0450 (207-277)||(8632-8702)
[»] scaffold0227 (1 HSPs)
scaffold0227 (177-266)||(7319-7403)
[»] scaffold0066 (1 HSPs)
scaffold0066 (177-262)||(33375-33464)
[»] scaffold0021 (1 HSPs)
scaffold0021 (207-271)||(130474-130538)
[»] scaffold0171 (1 HSPs)
scaffold0171 (199-277)||(23403-23482)
[»] scaffold0036 (1 HSPs)
scaffold0036 (207-282)||(9739-9814)
[»] scaffold0025 (1 HSPs)
scaffold0025 (223-277)||(23777-23832)
[»] scaffold0019 (1 HSPs)
scaffold0019 (177-282)||(71679-71792)
[»] scaffold0004 (3 HSPs)
scaffold0004 (207-282)||(92799-92874)
scaffold0004 (207-273)||(123617-123686)
scaffold0004 (227-275)||(83172-83220)
[»] scaffold0050 (1 HSPs)
scaffold0050 (214-274)||(70277-70337)
[»] scaffold0044 (1 HSPs)
scaffold0044 (207-282)||(53172-53247)
[»] scaffold0793 (1 HSPs)
scaffold0793 (208-273)||(4884-4950)
[»] scaffold0123 (1 HSPs)
scaffold0123 (175-282)||(44517-44630)
[»] scaffold0020 (1 HSPs)
scaffold0020 (208-277)||(135309-135378)
[»] scaffold0722 (1 HSPs)
scaffold0722 (214-274)||(7032-7092)
[»] scaffold0008 (1 HSPs)
scaffold0008 (222-282)||(263364-263424)
[»] scaffold0049 (1 HSPs)
scaffold0049 (222-273)||(63780-63831)
[»] scaffold0236 (1 HSPs)
scaffold0236 (223-277)||(25765-25819)
[»] scaffold0085 (1 HSPs)
scaffold0085 (207-268)||(26385-26446)
[»] scaffold0083 (1 HSPs)
scaffold0083 (241-274)||(45530-45563)
[»] scaffold1528 (1 HSPs)
scaffold1528 (207-255)||(1027-1075)


Alignment Details
Target: chr3 (Bit Score: 274; Significance: 1e-153; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 28812301 - 28812582
Alignment:
Q  1 agaagaagttcagcacttttgaagaaggatatatacaccataattcaaaataagcctggaagtgaaaggtcacagttaagggaactctattctactctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28812301 agaagaagttcagcacttttgaagaaggatatatacaccataattcaaaataagcctggaagtgaaaggtcacagttaagggtactctattctactctct 28812400  T
Q  101 tcaacaatgttactagagtaagtgttactgtatcataaggaaactttgtcttaaaattaggacactttgttatcaactatgaagcacggatacagacaac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28812401 tcaacaatgttactagagtaagtgttactgtatcataaggaaactttgtcttaaaattaggacactttgttatcaactatgaagcacggatacagacaac 28812500  T
Q  201 agacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28812501 ggacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 28812582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 34910279 - 34910377
Alignment:
Q  177 ctatgaagcacggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||    
T  34910279 ctatgaagcacggatacggacaccagacacgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgt 34910377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 14209079 - 14209180
Alignment:
Q  180 tgaagcacggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttg 279  Q
    |||||||||||| | |||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||| |    
T  14209079 tgaagcacggatgcggaca-cagacacgacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcg 14209177  T
Q  280 gtg 282  Q
    |||    
T  14209178 gtg 14209180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 10954944 - 10955011
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  10954944 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcg 10955011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 207 - 276
Target Start/End: Original strand, 28917993 - 28918062
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg 276  Q
    |||||||||||| | ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  28917993 gacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtg 28918062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 20503429 - 20503522
Alignment:
Q  178 tatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    |||||||||||||||| ||||   ||||| |||||||||||||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  20503429 tatgaagcacggatacggacac--gacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgt 20503522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 55401070 - 55401134
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  55401070 acgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 55401134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 4987358 - 4987283
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||| |||| ||||| ||||    
T  4987358 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtg 4987283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 14829673 - 14829756
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||  ||| ||||||||||||||||||||| ||||    
T  14829673 acagacactgacacgccgacacagctaataatttgaa-aaatcacataattcatggtaattacaagtgtcggtgtcgtgtcggtg 14829756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 274
Target Start/End: Complemental strand, 16000092 - 16000016
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||| ||||||||||||||||||||||||| || |||| |||||||||||||||  |||||||||||||||||    
T  16000092 acagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtcg 16000016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 26508102 - 26508166
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 271  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  26508102 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 8587088 - 8587021
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| ||| ||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  8587088 gacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtcg 8587021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 15796361 - 15796286
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||||  |||||||||||| |||||| ||||||||||||| |||||| |||||||||||||| ||||    
T  15796361 gacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtg 15796286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 21479110 - 21479177
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| ||||||||||||| |||||||| ||||||||||| |||| |||||||||||||    
T  21479110 gacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtcg 21479177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 41961726 - 41961647
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||| ||||||||| |||||||||||||||||| | ||||||| |||| ||||| |||||||||||||||||||||    
T  41961726 acagacactgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcgtgt 41961647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 34185190 - 34185120
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||||  |||||||||| || |||||||| ||||||||||| |||||||||||||||||||||    
T  34185190 gacacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgt 34185120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 49651853 - 49651783
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||| ||||||||  ||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  49651853 gacatgccgacacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgt 49651783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 1509539 - 1509599
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    |||||| ||||||||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  1509539 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgt 1509599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 10335353 - 10335286
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||||||||||||||||| || ||||||| || ||||||  |||||||||||||||||    
T  10335353 gacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcg 10335286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 14216884 - 14216955
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgtt 278  Q
    |||||| |||||||||||||||||| || | |||| ||||||||||||| ||||||||||| ||||||||||    
T  14216884 gacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgtt 14216955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 14223013 - 14223084
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgtt 278  Q
    |||||| |||||||||||||||||| || | |||| ||||||||||||| ||||||||||| ||||||||||    
T  14223013 gacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgtt 14223084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 51206412 - 51206353
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||    
T  51206412 gacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcg 51206353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 750685 - 750615
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||| ||||||||||||||||||||| | ||||||||||||  || | |||||||||||||||||||||    
T  750685 gacacggcgacacaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtcgtgt 750615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 10268553 - 10268487
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||||||||||  |||||||||||| ||||||||||||| |||||| ||||||||||| |||||    
T  10268553 gacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtc 10268487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 14832091 - 14832161
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||| ||| ||||||||||||| ||||||||||| ||| |||| ||||||||||| |||||||||    
T  14832091 gacacgccgatacagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgt 14832161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 276
Target Start/End: Complemental strand, 21257054 - 21256984
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg 276  Q
    |||||||  |||||| ||||||||||||| ||||||||||||||||| || |||||||||||||| |||||    
T  21257054 cgacacgatgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtatcgtg 21256984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 27505238 - 27505308
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||| ||||||||| ||||||||||  | ||||||||||||| |||||| |||||||||||||||||||||    
T  27505238 gacaagccgacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtcgtgt 27505308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 22774167 - 22774071
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||||||||||||| |||| ||||||| |||||| |||||| |||||||||| ||  || ||||||| ||||||||| ||| |||||||||||||    
T  22774167 ctatgaagcacggatacggaca-cagacacagacacgtcgacaccactaataattagacaaagtcacatatttcagtgtaattataagtgtcggtgtc 22774071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 35994804 - 35994744
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 268  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||    
T  35994804 gacaagccgacacagctaataatttgaa-aaatcacataattcagtgtaattacaagtgtcg 35994744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 11610513 - 11610573
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 267  Q
    |||||||| ||||  |||||||||| || ||||||||||||||||||||||||||||||||    
T  11610513 gacacgccaacaccgctaataatttaaaaaaatcacataattcagtgtagttacaagtgtc 11610573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 25775500 - 25775568
Alignment:
Q  207 gacacgccgacacaactaataatttgaaga-aatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||| |||||  |||||||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  25775500 gacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtcg 25775568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 250
Target Start/End: Original strand, 40052294 - 40052367
Alignment:
Q  176 actatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattca 250  Q
    |||||||||||||||||| ||||   ||||| |||||||||||||| ||||||||||||| |||||||||||||||    
T  40052294 actatgaagcacggatacggacac--gacactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 8383249 - 8383316
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||  ||||||||||||  |||||| ||||||||||||| ||| ||||||||||||||    
T  8383249 gacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcg 8383316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 14747553 - 14747624
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||||| ||||||||||||| ||| |||||||||| |||||| ||||||| ||| |||||||||    
T  14747553 gacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaagggtccgtgtcgtgt 14747624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 25948939 - 25948884
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||||||| |||||||||||||||||||| ||| |||||| ||||||||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgt 25948884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 26492272 - 26492205
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||| | ||||||||||||| |||||| | ||||||||||| |||||||| |||||||||    
T  26492272 gacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcg 26492205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 4991034 - 4990960
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggt 281  Q
    ||||| |||||||  |||||| |||||  |||| ||||||||||||||| ||||||||||||| |||||||||||    
T  4991034 gacactccgacaccgctaatagtttgagaaaattacataattcagtgtaattacaagtgtcggcgtcgtgttggt 4990960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 14979175 - 14979221
Alignment:
Q  209 cacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  14979175 cacgccgacacagctaataatttgaaaaaatcacataattcagtgta 14979221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 17005677 - 17005611
Alignment:
Q  216 acacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||| |||||||||||||  |||||| ||||||||||||| ||| |||||||||||| |||||||||    
T  17005677 acaccactaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtg 17005611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 39756228 - 39756298
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||| || ||||||||| || ||||||||||||| | | || |||||||||||||||||||||    
T  39756228 gacacgccgacaaaattaataatttaaaaaaatcacataatttaatataattacaagtgtcggtgtcgtgt 39756298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 7928448 - 7928509
Alignment:
Q  213 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||  ||||||||||||| |||||||||||||||||||| ||| | ||||||||||||    
T  7928448 ccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 3164090 - 3164022
Alignment:
Q  209 cacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||||   |||||||| | ||||||||    
T  3164090 cacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaagaacaagtgttgatgtcgtgt 3164022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 38731225 - 38731277
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||| || |||||||||||||||||||||||| | ||||||||||||    
T  38731225 ctaataattttaaaaaatcacataattcagtgtagttatatgtgtcggtgtcg 38731277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 18426941 - 18427008
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||| ||||||||||| || |||||||||||||| ||||| ||| |  |||||||||||    
T  18426941 gacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgtcg 18427008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 9800032 - 9800102
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||||  ||||||||||||  |||| ||||||||| ||||| ||  |||||||||||||||||    
T  9800032 gacacgccgacacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcgtgt 9800102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 15314935 - 15314869
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggt 281  Q
    ||||||| || ||||||||| ||||||||||||| |||||| ||| | |||| ||||||||||||||    
T  15314935 gacacaattattaatttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcgtgttggt 15314869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 8593136 - 8593196
Alignment:
Q  215 gacacaactaataatttg-aagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||| ||| ||||||| || ||||||||||||||||| || ||||||||||||||||||    
T  8593136 gacacagctactaatttggaaaaaatcacataattcagtataattacaagtgtcggtgtcg 8593196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 12703999 - 12704047
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    ||||||||||||| |||||||||||||  ||| ||||||||||||||||    
T  12703999 gacacgccgacaccactaataatttgagaaaagcacataattcagtgta 12704047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 55212960 - 55213020
Alignment:
Q  212 gccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    |||||||||  ||||||||| || ||||||||||||| |||| | ||||||||||||||||    
T  55212960 gccgacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcggtgt 55213020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 8039902 - 8039827
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||| ||||  ||||||||||||  |||| | ||||||||||||| ||| | ||||||||||||||| ||||    
T  8039902 gacacgccaacaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtg 8039827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 35222930 - 35222997
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||||||| | ||| |  ||||||||||||||| |||| ||| | ||||||||||||    
T  35222930 gacacgccgacacaactaacatttttagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 35222997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 211
Target Start/End: Original strand, 37991464 - 37991499
Alignment:
Q  176 actatgaagcacggatacagacaacagacacgacac 211  Q
    ||||||||||||||||||||||| ||||||||||||    
T  37991464 actatgaagcacggatacagacatcagacacgacac 37991499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 16789020 - 16789074
Alignment:
Q  223 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||| || |||||| ||||||||||||| ||| |||||| ||||||||||    
T  16789020 taataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgt 16789074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 33359722 - 33359820
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| || |   |||||||| ||||||| |||||| ||||||||||||| |  ||||||| || ||||||  |||||||||| ||||||    
T  33359722 ctatgaagcacggacaccggacacagacactgacacgctgacacagctaataatttgaaaaggtcacatattttagtgtaaatacaagtgtcagtgtcg 33359820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 34307856 - 34307786
Alignment:
Q  199 acagacacga-cacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 268  Q
    |||||||||| ||||| |||||  ||||||||||||  |||||||||| ||||||||| ||| ||||||||    
T  34307856 acagacacgaacacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 11665951 - 11666008
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttg 279  Q
    ||||||||||||  |||||||| |||| |||||| ||| | |||||||||||||||||    
T  11665951 ctaataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttg 11666008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 29508436 - 29508497
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 268  Q
    ||||| |||| || |||||||||||||| |||||| ||||||||||||| ||| | ||||||    
T  29508436 gacacaccgataccactaataatttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 2620120 - 2620072
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    ||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  2620120 gacacgccgacaccactaatcatttgagaaaatcacataattaagtgta 2620072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 11493428 - 11493380
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    |||||| |||||| ||||||||| |||  ||||||||||||||||||||    
T  11493428 gacacgtcgacaccactaataatgtgagaaaatcacataattcagtgta 11493380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 25064901 - 25064949
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    |||||||||||||  ||||| ||||||| ||||||||||||| ||||||    
T  25064901 gacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgta 25064949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 40993432 - 40993335
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataattt-gaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||||| ||||   ||||| |||||  ||||||  ||||||||||  || |||||||||||||||||||| ||| | ||||||||||||    
T  40993432 ctatgaagcacggatacggaca--cgacacggacacctcgacaccgctaataatttaaaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 40993335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 15816196 - 15816121
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  15816196 gacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtg 15816121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 36450851 - 36450754
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||||| |||| | ||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| |||||||    
T  36450851 ctatgaagcacggatacggaca-cggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcg 36450754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 25566841 - 25566908
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  25566841 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgttggtg 25566908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 2572124 - 2572053
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  2572124 cgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgt 2572053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 22651968 - 22652043
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| | || ||||||||||||||||||||| ||||    
T  22651968 gacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtg 22652043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 40332154 - 40332248
Alignment:
Q  176 actatgaagcacggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    |||||||||||||||||| |||| | |||||||||||  |||||  | ||||||||||  |||||||||||||||||||| ||||||||||||||||    
T  40332154 actatgaagcacggatacggacaccggacacgacacg--gacactgcaaataatttgagaaaatcacataattcagtgtaattacaagtgtcggtgt 40332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 13437031 - 13436956
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||| ||||||||||||| |||||||||||||||  ||| | ||||||||||||||||||| ||||    
T  13437031 gacacgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcgtgtcggtg 13436956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 29510371 - 29510296
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||| || |||||||||||||||| |||| ||||    
T  29510371 gacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtg 29510296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 4948657 - 4948711
Alignment:
Q  220 aactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  4948657 aactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 4948711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 8342929 - 8343032
Alignment:
Q  176 actatgaagcacggatacagacaacagacacgacacg----ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 271  Q
    ||||||||||||||| || |||| | ||||||||||     |||||| | ||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  8342929 actatgaagcacggacacggacatcggacacgacactgacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtg 8343028  T
Q  272 tcgt 275  Q
    ||||    
T  8343029 tcgt 8343032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 22595950 - 22596053
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac------gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 270  Q
    ||||||||||||||||| |||| | |||||      |||||||||||||| |||||||||| || |||| ||||||||||||||| |||||||||| |||    
T  22595950 ctatgaagcacggatacggacaccggacacaacactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggt 22596049  T
Q  271 gtcg 274  Q
    ||||    
T  22596050 gtcg 22596053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 29447178 - 29447102
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||| ||||||||||||||||||||  ||||||||||||||| ||||  |||||||||||||||| ||| ||||    
T  29447178 cgacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtg 29447102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 20873061 - 20873128
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||| |  |||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  20873061 gacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 20873128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 24613513 - 24613579
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||| |||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  24613513 gacacaccgacacagctaataatttgaa-aaatcacataattaagtgtaattacaagtgtcggtgtcg 24613579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 30271358 - 30271288
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||||| ||||| ||||||| |||||||||||| ||||||| ||||||||| | |||||||||    
T  30271358 gacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtgccagtgtcgtgt 30271288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 31556989 - 31557054
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  31556989 gacacgccgacacagttaataatttgaa-aaatcacataattcagtgtaattacaagtttcggtgtc 31557054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 4298952 - 4298887
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||||||||||||  |||||||||||| ||||||||||||| | |||| |||||||||||||||||    
T  4298952 acacgccgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtc 4298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 8343307 - 8343376
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    |||||| |||||| | ||||||||||||| ||||||||||||| |||||| ||||||||||| |||||||    
T  8343307 cgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgt 8343376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 282
Target Start/End: Complemental strand, 11927150 - 11927078
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||   |||||||||||  |||||||||||||||||||| ||| | ||||||||||||||||||||    
T  11927150 acgccgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtg 11927078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 274
Target Start/End: Original strand, 24669416 - 24669492
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||| ||||||| |||||   ||||||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  24669416 acagacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaattacaagtgtcggtgtcg 24669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 5813584 - 5813651
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| ||||||||||||| || ||||||| || ||||||  |||||||||||||||||    
T  5813584 gacacgccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcg 5813651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 18170549 - 18170482
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||| ||| |||||||| |||| |||||||||| |||| |||||| |||||||||||    
T  18170549 gacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcg 18170482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 18634117 - 18634050
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||| ||| |||||||| |||| |||||||||| |||| |||||| |||||||||||    
T  18634117 gacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcg 18634050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 30077454 - 30077387
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||| || || ||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  30077454 gacacgccaacgcagctaataatttgaaaacatcacataattcagtgtaattacaagtgtccgtgtcg 30077387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 4673501 - 4673420
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttg 279  Q
    |||||||| ||||||||||||||  |||||||||||| |||||| | ||||||||||| |||||||| || ||||| |||||    
T  4673501 acagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaattacaagtatcagtgtcttgttg 4673420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 273
Target Start/End: Original strand, 14134661 - 14134757
Alignment:
Q  177 ctatgaagcacggatacagacaacagacacg-acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||||||||||||| |||| | |||||| ||||| |||||  |||||||||||||  |||||||||||||||||||| ||| |  ||||||||||    
T  14134661 ctatgaagcacggatacggacacc-gacacggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtc 14134757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 18407711 - 18407772
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 268  Q
    |||| ||||||||| |||||||||  || |||||||||||||||||||| ||||||||||||    
T  18407711 gacatgccgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 277
Target Start/End: Original strand, 21465388 - 21465474
Alignment:
Q  189 gatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||| |||| | |||||||||||  |||||| ||||||||||||| |||||| |||||||  |||| |||||||||| ||||||||||    
T  21465388 gatacggacaccggacacgacacg--gacacagctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcgtgt 21465474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 22197808 - 22197743
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||| ||||| ||||||||||||| || |||||||||| |||||| ||||||||||| |||||    
T  22197808 acacgccaacacagctaataatttgaaaaattcacataatttagtgtaattacaagtgtcagtgtc 22197743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 41832007 - 41831946
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 268  Q
    |||| |||||||||  |||||||||||| ||||||||||||||||||||  |||||||||||    
T  41832007 gacatgccgacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtcg 41831946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 13844689 - 13844596
Alignment:
Q  180 tgaagcacggatacagacaacagacacg-acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||| |||||||||   |||||| ||||||||||||  ||||||||||||  ||||||||||||| |||||| ||| | ||||||||||||    
T  13844689 tgaagcacgaatacagacac--gacacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcg 13844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 25192414 - 25192350
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 271  Q
    |||||||||||||| ||||||||||||| || | |||||||||||| || ||| |||||||||||    
T  25192414 gacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcggtg 25192350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 4786405 - 4786338
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||| | ||||||||| |  |||||||||||||||||||| ||| | ||||||||||||    
T  4786405 gacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 11944658 - 11944729
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttg 279  Q
    ||||||||||||   |||||||||||  ||||||||||| |||||||| ||| | |||||||||||||||||    
T  11944658 acacgccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgttg 11944729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 277
Target Start/End: Complemental strand, 17468568 - 17468505
Alignment:
Q  214 cgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||| ||||||||| | |||||||||||| | ||||| |||||||||| ||||||||||    
T  17468568 cgacacaacaaataatttgtaaaaatcacataatgcggtgtaattacaagtgttggtgtcgtgt 17468505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 24196665 - 24196628
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcaca 243  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  24196665 cgacacgccgacacaactaataatttgaaaaaatcaca 24196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 24362270 - 24362194
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||||  ||||||||||||   ||||||||||||||||||| ||| | |||||  |||||||| ||||    
T  24362270 cgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtcaatgtcgtgtcggtg 24362194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 31236644 - 31236580
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 271  Q
    |||||||||||||  ||||||||||||  ||||||||||||||| |||| ||| | |||||||||    
T  31236644 gacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 16642033 - 16641971
Alignment:
Q  215 gacacaactaataatttgaagaaat-cacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||||||||||||| ||||| ||||||||| ||||| |||| | |||||||||||||||    
T  16642033 gacacaactaataatttga-gaaatacacataatttagtgtcgttatatgtgtcggtgtcgtgt 16641971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 20679447 - 20679396
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||||||||  |||||||||| ||||||||| ||| |||||||||||||    
T  20679447 ctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 24858001 - 24858073
Alignment:
Q  207 gacacgccgacacaactaataatttg---aagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||||||||  ||||||||||   || ||||||||||||||||||||  ||||||||||| ||||||||    
T  24858001 gacacgccgacacagttaataatttgaaaaaaaaatcacataattcagtgta-atacaagtgtcgttgtcgtgt 24858073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 34897077 - 34897144
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||| ||||||  ||||||||||||  |||||||||||||||||||| ||| | |||||| |||||    
T  34897077 gacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 34897144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 41838190 - 41838131
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgt 266  Q
    |||||| ||||||| |||||||||| || |||||||||||||||||| |  |||||||||    
T  41838190 gacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgt 41838131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 7658458 - 7658520
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    |||||||||| |||||||||||||  |||| ||||||||||||||| ||| |  |||||||||    
T  7658458 acgccgacaccactaataatttgagaaaattacataattcagtgtaattatatttgtcggtgt 7658520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 27101507 - 27101553
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtg 253  Q
    |||||||||||||  ||||||||||||| ||||||||||||| ||||    
T  27101507 gacacgccgacaccgctaataatttgaaaaaatcacataatttagtg 27101553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 31514872 - 31514930
Alignment:
Q  215 gacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgt 272  Q
    |||||||||||||||||||| ||| ||||||||||||| |||  ||||||||| |||||    
T  31514872 gacacaactaataatttgaaaaaaatcacataattcagcgtaactacaagtgttggtgt 31514930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 276
Target Start/End: Complemental strand, 39954347 - 39954277
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg 276  Q
    ||||||||||||||  ||||||||||||  ||||||||||||| |||||| ||| | ||| ||||| ||||    
T  39954347 cgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgacggtgccgtg 39954277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 275
Target Start/End: Complemental strand, 7472575 - 7472514
Alignment:
Q  214 cgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    |||||| ||||||||||| |||||||||||||| | |||||| ||| | ||||| |||||||    
T  7472575 cgacaccactaataatttaaagaaatcacataaattagtgtaattatatgtgtctgtgtcgt 7472514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 3025558 - 3025610
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||  |||||||||||||||||||| ||| | ||||| ||||||    
T  3025558 ctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcg 3025610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 28745505 - 28745565
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||| || |||||||||||| ||||  ||||| ||||| |||||||| ||||    
T  28745505 ctaataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtcgtgtcggtg 28745565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 24339634 - 24339709
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  24339634 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtg 24339709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 18215283 - 18215183
Alignment:
Q  177 ctatgaagcacggatacagacaacagacacga-cacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    ||||||||||||||| |||||| | ||||| | ||||||||| || ||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  18215283 ctatgaagcacggatgcagaca-cggacactaacacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgt 18215185  T
Q  276 gt 277  Q
    ||    
T  18215184 gt 18215183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 8234138 - 8234205
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||    
T  8234138 gacacaccgacacaactaataatttgaaaaaataacataattcagtgtagttacaagtgccggtgtcg 8234205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 25481894 - 25481961
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||| |||||||    
T  25481894 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcg 25481961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 3991322 - 3991384
Alignment:
Q  213 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    |||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||    
T  3991322 ccgacacaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgt 3991384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 27945033 - 27945103
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||||||| |||||||||||||  |||| ||||||||||||||| |||||||||||||||||||||    
T  27945033 gacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgt 27945103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 9408414 - 9408333
Alignment:
Q  195 gacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    |||| ||||||| ||||| ||||||||| |||||||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  9408414 gacaccagacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgt 9408333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 282
Target Start/End: Complemental strand, 11272652 - 11272578
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacata--attcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||| |||||||||| ||||||||||  |||||||||| ||||||||||||||||||||| ||||    
T  11272652 acgccgacacaactgataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtcggtg 11272578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 5409903 - 5409833
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||| || ||| ||||||||||||| |||||||||||||||||| | |||||||||||||||||||||    
T  5409903 gacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgt 5409833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 275
Target Start/End: Original strand, 25822647 - 25822715
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    |||||||||||||||||||||||||||| |||   || ||||||||||| |||||||||||||||||||    
T  25822647 gacacgccgacacaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtgtcggtgtcgt 25822715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 26033513 - 26033453
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||| ||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcggtg 26033453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 7438698 - 7438773
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||| |||||||||  |||||||||||| ||||||||||||||| |||| ||||||||||||||||| ||| ||||    
T  7438698 gacatgccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcggtg 7438773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 11665507 - 11665432
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||| || ||| |||||||| |||| ||| ||||    
T  11665507 gacacgctgacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtcatgtcggtg 11665432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 13770686 - 13770753
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||||| |||||||||| || |||| ||||||||||||||| |||||||||||| ||||||||    
T  13770686 acgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgtgt 13770753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 35861957 - 35862024
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||| ||  ||||||| |||||||    
T  35861957 acacgccgacacaactaataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtcgt 35862024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 7197394 - 7197297
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||||||  ||| ||||||  |||||||||||||| |||||||||| || ||||||  ||||||| |||| ||||||||||||||||||    
T  7197394 ctatgaagcacggatacgaaca-cagacattgacacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtcg 7197297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 9778500 - 9778562
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||| || |||||||||| ||||||||||||||||| || |||||||||||||||||||||    
T  9778500 gacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgt 9778562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 11061143 - 11061077
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||| |||||||| ||||||||||||| ||||||||||||| ||| || |||||||||||||||||    
T  11061143 gacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtc 11061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 32094079 - 32094017
Alignment:
Q  216 acacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||||| ||||||||||||||    
T  32094079 acacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgt 32094017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 43027536 - 43027466
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||| |||| || ||||||||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  43027536 gacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgt 43027466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 207 - 275
Target Start/End: Original strand, 21560490 - 21560563
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa-----tcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    |||||||||| ||| |||||||||||||||||     ||||||||||||||||| |||||||||||||||||||    
T  21560490 gacacgccgatacagctaataatttgaagaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgt 21560563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 18039006 - 18039066
Alignment:
Q  223 taataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  18039006 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtg 18039066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 6630979 - 6630904
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||| |||||||||||||  || |||| |||||||||||| ||| | |||||| |||||||||||||    
T  6630979 gacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtg 6630904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 277
Target Start/End: Original strand, 7058429 - 7058488
Alignment:
Q  218 acaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||||||||||| ||||||  |||||||||||| |||||||||| ||||||||||    
T  7058429 acaactaataatttgaaaaaatcatgtaattcagtgtaattacaagtgttggtgtcgtgt 7058488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 264
Target Start/End: Original strand, 11831402 - 11831481
Alignment:
Q  185 cacggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagt 264  Q
    ||||||||| ||||   ||||||||||  ||||||||||||||||||||| |||||| |||||| |||||| ||||||||    
T  11831402 cacggatacggacactggacacgacacatcgacacaactaataatttgaaaaaatcatataatttagtgtaattacaagt 11831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 24105670 - 24105737
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| ||||||||||||| ||||  ||| |||||||||| ||||||||||||| ||||    
T  24105670 gacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcggagtcg 24105737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 40287423 - 40287361
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 270  Q
    |||||||||||||||| ||||||||||| |||||| || |||||||||| ||||||||||||||    
T  40287423 gacacgccgacacaacgaataatttgaaaaaatcatat-attcagtgtaattacaagtgtcggt 40287361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 15680771 - 15680868
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||||| ||||   ||||| |||||||||||| | |||||||||  || ||||||||||||| |||||| ||| ||||||||||||||    
T  15680771 ctatgaagcacggatacggacatg-gacactgacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcg 15680868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 28155563 - 28155629
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||  ||||||||||||  |||| ||||||||| ||||| ||||||||||||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcg 28155629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 33994204 - 33994270
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||||||| |||||| ||||||||| |  ||||||||||||||| | |||||||||||||||||    
T  33994204 gacacgccgacgcaactactaatttgaaaaggtcacataattcagtgcaattacaagtgtcggtgtc 33994270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 19992001 - 19992061
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    |||||| ||||||||||||  |||||||||| ||||||||| ||| |||||||||||||||    
T  19992001 gacacagctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgt 19992061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 21880159 - 21880211
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||  |||| ||||||||||||||| ||||||||||||||||||    
T  21880159 ctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcg 21880211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 25791616 - 25791714
Alignment:
Q  178 tatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg 276  Q
    |||||||||||||||| |||| ||||||| |||||||||||||  ||||| ||||||  || ||||||||| || |||||||| | ||||||||||||||    
T  25791616 tatgaagcacggatacggaca-cagacactgacacgccgacaccgctaattatttgagaaattcacataat-caatgtagttatatgtgtcggtgtcgtg 25791713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 13300410 - 13300477
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||| ||||||||||||||| |||||| ||||||||||||| |||| ||| |||||||| ||| ||||    
T  13300410 gacataactaataatttgaaaaaatcatataattcagtgtaattaccagtctcggtgtcatgtcggtg 13300477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 32308112 - 32308187
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||  ||||||||||||  |||||||||||||||||||| ||  | ||||| ||||||||| ||||    
T  32308112 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtg 32308187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 19206043 - 19206117
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||  ||||||||||||  ||||||||||||||| | || ||| | ||||||||||| ||||||||    
T  19206043 acacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtcttgttggtg 19206117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 29763241 - 29763187
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttaca 261  Q
    ||||| || |||||||| |||||||||| ||||||||||||| ||||||||||||    
T  29763241 gacacaccaacacaacttataatttgaaaaaatcacataattaagtgtagttaca 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 1885587 - 1885640
Alignment:
Q  229 tttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||| |||| |||||||||| |||| | ||||||||||||||||||||||||    
T  1885587 tttgaaaaaatgacataattcaatgtaatcacaagtgtcggtgtcgtgttggtg 1885640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 277
Target Start/End: Original strand, 2334271 - 2334312
Alignment:
Q  236 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  2334271 aaatcacataatttagtgtaattacaagtgtcggtgtcgtgt 2334312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 277
Target Start/End: Original strand, 10042930 - 10042999
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||| |||||||||||||  || |||||||||| || ||| ||| ||||||| |||||||||    
T  10042930 acacgccgacaccactaataatttgataaattcacataatttagcgtaattataagtgtcagtgtcgtgt 10042999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 13557820 - 13557750
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaa---tcacataattcagtgtagttacaagtg 265  Q
    |||||||| |||||||||||| |||||||||||| || |||   ||||||||||||||||| |||||||||    
T  13557820 acagacactgacacgccgacaaaactaataatttaaaaaaaaaatcacataattcagtgtaattacaagtg 13557750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 19213810 - 19213862
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||| || |||||||||||| |||||||  |||||||||||||||||    
T  19213810 ctaataattttaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcg 19213862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 22868034 - 22868082
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    ||||||||||||| ||||||||| |||  ||||||||||||||||||||    
T  22868034 gacacgccgacaccactaataatatgagaaaatcacataattcagtgta 22868082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 5835242 - 5835305
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||||||||| ||||||| |||||  |||| ||||||||||||||| ||| | |||||||||||    
T  5835242 acgccgacaccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgtc 5835305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 15902805 - 15902884
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||| |||| |||||||| | |||||||||||  ||||||||||||| |||||| ||| | |||||||||| ||||    
T  15902805 acagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgt 15902884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 20549783 - 20549850
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||| |||||||  ||||||||||||  ||||||| |||||||||||| ||| | ||||||||||||    
T  20549783 gacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcg 20549850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 26733296 - 26733363
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||| ||||||  ||||||||||||  ||||||||||||||||| || ||| | ||||||||||||    
T  26733296 gacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcg 26733363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 29787435 - 29787388
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    ||||||||||||  ||||||||||||  ||||||||||||||||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcacataattcagtgta 29787388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 11890970 - 11890916
Alignment:
Q  223 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||| |||||| ||||||||||||| |||  ||||| ||||||||||    
T  11890970 taataatttgaaaaaatcatataattcagtgtaattatgagtgtaggtgtcgtgt 11890916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 18013133 - 18013071
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||| ||||||||||| || |||| ||||||||||||||| ||| | ||||| |||||||||    
T  18013133 gacactactaataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtcgtgt 18013071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 21826266 - 21826332
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||| ||||||||||| || ||||||||||| ||||| || | | | ||||||||||||    
T  21826266 acacgccgacacgactaataatttaaaaaaatcacataactcagtctaataatatgtgtcggtgtcg 21826332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 22602777 - 22602707
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||||    ||| ||||||  |||||||||||||||||||| ||| | |||||||||||||||    
T  22602777 gacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 22602707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 41020488 - 41020553
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    |||||| ||||||||||||||||||  | ||||||||||||| |||||| ||| | | ||||||||    
T  41020488 gacacgtcgacacaactaataatttacaaaaatcacataatttagtgtaattatatgcgtcggtgt 41020553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 48438560 - 48438604
Alignment:
Q  229 tttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||||| ||||||||||||||| |||| ||||| |||||||||||    
T  48438560 tttgaaaaaatcacataattcaatgtaattacacgtgtcggtgtc 48438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 10770776 - 10770671
Alignment:
Q  177 ctatgaagcacggatacagaca--aca--gacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 271  Q
    ||||||||||||||||| ||||  |||  ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  10770776 ctatgaagcacggatacggacacgacatggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 10770677  T
Q  272 tcgtgt 277  Q
    ||||||    
T  10770676 tcgtgt 10770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 16766689 - 16766764
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  16766689 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtg 16766764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 34595126 - 34595193
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  34595126 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 34595193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 7801222 - 7801156
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||    
T  7801222 acacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 7801156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 8365586 - 8365516
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||||||||||||||||||| | |||||||||||| ||||| |||||||||||||||||||||    
T  8365586 gacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgt 8365516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 9107436 - 9107362
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  9107436 acacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtg 9107362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 16833291 - 16833365
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||    
T  16833291 acagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgt 16833365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 853926 - 853859
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||| | ||||||||||||||||||    
T  853926 gacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtcg 853859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 7977897 - 7977830
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  7977897 gacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcg 7977830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 8777040 - 8776973
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| |||||||    
T  8777040 gacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcg 8776973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 12696316 - 12696386
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||||| ||||||||||| |||||||||    
T  12696316 gacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgt 12696386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 17841686 - 17841589
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||| ||||| |||| | ||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||    
T  17841686 ctatgaagcactgatacggaca-cggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcg 17841589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 274
Target Start/End: Original strand, 28152062 - 28152157
Alignment:
Q  178 tatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||||  |||| | ||||| |||||||||||| | ||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  28152062 tatgaagcacggatatggaca-cggacactgacacgccgacaaagctaataatttgaa-aaatcacataattcagtgtaattacaagtgtcggtgtcg 28152157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 1681751 - 1681811
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 268  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||    
T  1681751 acacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 277
Target Start/End: Original strand, 31384923 - 31384982
Alignment:
Q  218 acaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||    
T  31384923 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 31384982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 280
Target Start/End: Original strand, 3398611 - 3398683
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttgg 280  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||||||| ||| |||| |||||||||||||||    
T  3398611 gacacgccgacacagctaataatttgaa-aaatcatataattcagtgtaattataagtatcggtgtcgtgttgg 3398683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 426581 - 426514
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||  |||||||||||| ||||||||||||| | |||| ||||||||||||||||||    
T  426581 gacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcg 426514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 5970175 - 5970100
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||| |||||||  |||||||||||| |||||||||||||||||||| |||||| ||| |||||||||| ||||    
T  5970175 gacacgtcgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtg 5970100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 7930297 - 7930367
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||| |||||||||| |||||||||||| ||||||||||||| |||| | || ||||||||||||||||||    
T  7930297 gacatgccgacacaattaataatttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtcgtgt 7930367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 7938108 - 7938174
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||||||||||||| ||||||||||||| |||||| |||||| |||||| ||| |||||||||||||    
T  7938108 gacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 9911587 - 9911525
Alignment:
Q  216 acacaactaataatttgaa-gaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||| |||||||||| || ||||||||||||||||||||| |||||||||||||||||||||    
T  9911587 acacagctaataatttaaaagaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 9911525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 31959151 - 31959213
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcgg 269  Q
    ||||||||| |||| ||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  31959151 gacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcgg 31959213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 15489798 - 15489733
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||| ||||||||||||||||||||| |||| ||| |||||| |||| |||||||||||||||||    
T  15489798 acacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 3209373 - 3209441
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| ||||||||||||| ||| |||||||||| |||||  ||||||||||||||||||    
T  3209373 gacacgccgacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcggtgtcg 3209441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 9522898 - 9522958
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||| || |||||||||||||||||||| |||||||||||||||| |||| ||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtg 9522958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 24645479 - 24645539
Alignment:
Q  214 cgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||| ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  24645479 cgacacagctaataatttgaaaaaaatcacataattcagtatagttacaagtgtcggtgtc 24645539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 28715302 - 28715354
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  28715302 ctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 28715354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 32978967 - 32978899
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaat-cacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| ||||||||||||| |||  ||||||||| |||||| ||||||||||||||||||    
T  32978967 gacacgccgacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcggtgtcg 32978899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 6898348 - 6898281
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||| |||||  ||||||||||||| |||| |||||||| |||||| ||||||||||||||||||    
T  6898348 gacacgctgacacgtctaataatttgaacaaattacataattaagtgtaattacaagtgtcggtgtcg 6898281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 17302548 - 17302619
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||| |||| |||||||||||  ||||||||    
T  17302548 gacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtcattgtcgtgt 17302619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 1191763 - 1191706
Alignment:
Q  211 cgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 268  Q
    |||||||||| ||||||||||||| || ||||| ||||||||||| ||||||||||||    
T  1191763 cgccgacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcg 1191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 4877934 - 4878002
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||| |||||||| ||||||||||||| ||| |||||||||| ||| || ||||||||||||||||||    
T  4877934 gacacaccgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcggtgtcg 4878002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 8713971 - 8714047
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||| |||||||  |||||||||||| ||| ||||||||||||||||| |||||| ||| |||||||||| ||||    
T  8713971 gacacgtcgacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtg 8714047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 274
Target Start/End: Complemental strand, 403915 - 403864
Alignment:
Q  223 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||| ||||||||||||| ||||||  |||||||||||||||||    
T  403915 taataatttgaaaaaatcacataatttagtgtaactacaagtgtcggtgtcg 403864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 7265660 - 7265593
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||| ||||  ||||||||||||  |||||||||||||||||||| ||| | ||||||||||||    
T  7265660 gacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 9025546 - 9025491
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||||||  |||||||||||||||||||| ||| | |||||||||||||||    
T  9025546 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 9025491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 19040344 - 19040411
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||  ||||||||||||  |||||||||||||||||||| ||| | ||||| ||||||    
T  19040344 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcg 19040411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 21395375 - 21395305
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||| ||||  ||||||||||||  |||| |||||||| |||||| |||||||||||||||||||||    
T  21395375 cgacacgccaacaccgctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcgtgt 21395305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 26562681 - 26562756
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||  |||| |||||||  |||||||||||||||||||| ||| | |||||| |||||||| ||||    
T  26562681 gacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcggtg 26562756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 33001356 - 33001289
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||  ||||||||||||| ||||||||||||| | |||| ||| | ||||||||||||    
T  33001356 gacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcg 33001289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 9027170 - 9027240
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||||  ||||||||||||   ||||||||||||| ||||| ||| | |||||||||||||||    
T  9027170 gacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgt 9027240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 19044456 - 19044522
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||||||||| |||||||||||||  | |||||||||||||||||  ||| | |||||||||||    
T  19044456 gacacgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtcggtgtc 19044522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 10842524 - 10842572
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    |||||||||||||  ||||||||||||| ||||||||||||| ||||||    
T  10842524 gacacgccgacaccgctaataatttgaaaaaatcacataatttagtgta 10842572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 17341731 - 17341671
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 267  Q
    |||||||||||||   |||||||||||  |||||||||||||||||||| ||| |||||||    
T  17341731 gacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 282
Target Start/End: Original strand, 18367823 - 18367903
Alignment:
Q  202 gacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||||||||| |||||  ||| |  |||||||| ||| ||||||| ||| | ||||||||||||||| ||||    
T  18367823 gacacgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtg 18367903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 34225868 - 34225828
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  34225868 gacacaactaataatttgaaaaaatcgcataattcagtgta 34225828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 9629375 - 9629442
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||  | ||||||||||  ||||||||||||||| |||| ||| | ||||||||||||    
T  9629375 gacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9629442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 24115914 - 24115871
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattca 250  Q
    ||||||| ||||||||||||||||| || |||||||||||||||    
T  24115914 gacacgctgacacaactaataatttcaaaaaatcacataattca 24115871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 34290144 - 34290076
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||| |||||||||||||||||||||    ||||||||||||||||||| ||  | |||||||||||||||    
T  34290144 gacatgccgacacaactaataatttgcgagaatcacataattcagtgtaatt--atgtgtcggtgtcgtgt 34290076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 2117068 - 2117137
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||| |||||||  ||||||||||||| ||||||||||||||| || | ||| ||||||| |||||||||    
T  2117068 gacactccgacacctctaataatttgaaaaaatcacataattcaatgcaattataagtgtc-gtgtcgtgt 2117137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 7151419 - 7151473
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg 276  Q
    ||||||||||||| ||||||||||||| |||||| ||| | |||| |||||||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgtcgtg 7151473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 8931668 - 8931594
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||| |||| |||||||  |||| |||||||||||| || ||| | |||||| |||||||| ||||    
T  8931668 acacgccgacacagctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcgtgtcggtg 8931594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 13360439 - 13360373
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||||| |||||| |||| ||||||||  |||||||||||||||||||| ||| | || ||||||||    
T  13360439 gacacgtcgacaccactagtaatttgagaaaatcacataattcagtgtaattatatgtttcggtgtc 13360373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 266
Target Start/End: Original strand, 17435162 - 17435250
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgt 266  Q
    ||||||||||||||||| |||| | ||||| || ||| ||||| | |||||||||| || |||| ||||||||||||||| ||||||||||    
T  17435162 ctatgaagcacggatac-gaca-cggacactgatacgtcgacatagctaataattttaaaaaattacataattcagtgtaattacaagtgt 17435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 25010262 - 25010212
Alignment:
Q  214 cgacacaactaataatttgaagaaatcacataattcagtgtagttacaagt 264  Q
    ||||||| ||||||||||||| |||||||||||||||| ||  ||||||||    
T  25010262 cgacacagctaataatttgaaaaaatcacataattcagcgttattacaagt 25010212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 274
Target Start/End: Original strand, 1700362 - 1700411
Alignment:
Q  225 ataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||| || |||||||||| ||||||||| ||| ||||||||||||||    
T  1700362 ataatttaaaaaaatcacatatttcagtgtaattataagtgtcggtgtcg 1700411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 7027236 - 7027301
Alignment:
Q  210 acgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||  || |||||||||| ||| ||||||||||||||||| ||| | ||||||||||||    
T  7027236 acgccgacacccctgataatttgaaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 9658871 - 9658936
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    |||||||||||||  |||||||||| |  |||||||||||||||||||| ||| |  |||||||||    
T  9658871 gacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgt 9658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 275
Target Start/End: Complemental strand, 10827617 - 10827560
Alignment:
Q  218 acaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    |||||||||||||||||||||||||||||   |||||| |||||| | || |||||||    
T  10827617 acaactaataatttgaagaaatcacataacatagtgtaattacaaatatcagtgtcgt 10827560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 27904105 - 27904037
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaat--cacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||||||||||| | |||||||||| || |||   |||||||||||||||| |||||| ||||||||||    
T  27904105 gacacgccgacatagctaataatttaaaaaaaaaacacataattcagtgtaattacaaatgtcggtgtc 27904037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 32299283 - 32299332
Alignment:
Q  223 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    |||||||||||  ||||||||||||||| |||||||| | ||||||||||    
T  32299283 taataatttgagaaaatcacataattcaatgtagttatacgtgtcggtgt 32299332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 9195806 - 9195746
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||  |||| |||||||| |||||| ||| | ||||||||||||||| ||||    
T  9195806 ctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgtaggtg 9195746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 9617442 - 9617494
Alignment:
Q  223 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    |||||||||||  ||||||||||||||| |||| ||| | |||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgt 9617494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 21924999 - 21924935
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||  ||||||||||||  | |||| ||||||||||||| ||| | ||||||||||||    
T  21924999 acgccgacactgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcg 21924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 28862082 - 28862189
Alignment:
Q  176 actatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacat-aattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||||||||||| || |||| ||||||| | ||||||||||    |||||||||||  |||| |||| ||||||||||| | | | |||||||||||    
T  28862082 actatgaagcacggacacggaca-cagacaccggcacgccgacatcgataataatttgataaaatgacattaattcagtgtaatcatatgtgtcggtgtc 28862180  T
Q  274 gtgttggtg 282  Q
    |||||||||    
T  28862181 gtgttggtg 28862189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 32511718 - 32511666
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||| |  |||||||||||||||||||| ||| |||||| |||||||    
T  32511718 ctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgtcg 32511666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 34073399 - 34073339
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||  ||||| |||||||||||||| ||| | | ||||||||||||| ||||    
T  34073399 ctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcggtg 34073339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 24577253 - 24577183
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  24577253 gacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 24577183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 22881683 - 22881616
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  22881683 gacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 22881616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 113291 - 113361
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  113291 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgt 113361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 37598793 - 37598890
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||| ||||||| ||||||| | ||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||    
T  37598793 ctatgacgcacggacacagacaccggacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcg 37598890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 274
Target Start/End: Complemental strand, 46348479 - 46348383
Alignment:
Q  178 tatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||||| |||| | ||||| |||||||||||||| ||||||||||||| |||||| |||||| |||||| ||||||||||||||||||    
T  46348479 tatgaagcacggatacggaca-cggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcg 46348383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 47989481 - 47989564
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||| ||||||||||||||| ||||||||| || |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  47989481 acagacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtg 47989564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 1705060 - 1704989
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  1705060 cgacacaccgacacatctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgtgt 1704989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 6332671 - 6332737
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  6332671 gacacaactaataatttgaa-aaatcacataattcagtgtaattacaagtatcggtgtcgtgttggtg 6332737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 1486776 - 1486706
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  1486776 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgt 1486706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 277
Target Start/End: Original strand, 9828021 - 9828106
Alignment:
Q  192 acagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||| | |||||||||||||||||| |||||||||||||  |||||||||||||||||||| ||  | |||||||||||||||    
T  9828021 acagacaccggacacgacacgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgt 9828106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 40258994 - 40258934
Alignment:
Q  213 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  40258994 ccgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 40258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 22515954 - 22515887
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||| |||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  22515954 gacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 22515887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 38078728 - 38078661
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  38078728 gacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 38078661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 42359516 - 42359449
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||| |||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  42359516 gacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 42359449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 1815249 - 1815315
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||||||||||| |||| |||| || |||||||||||||||||||| |||||||||||||||||    
T  1815249 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 1815315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 6612238 - 6612168
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||| |||  |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  6612238 gacacgccgatacagttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgt 6612168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 267
Target Start/End: Complemental strand, 14359623 - 14359529
Alignment:
Q  177 ctatgaagcacggatacagaca----acagacacg-acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 267  Q
    ||||||||||||||||| ||||    ||||||||| ||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||    
T  14359623 ctatgaagcacggatacggacacgacacagacacggacacgccgacacagctaataatttgaa-aaatcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 274
Target Start/End: Original strand, 51409973 - 51410084
Alignment:
Q  169 gttatcaactatgaagcacggatacagacaacagacac------gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttaca 261  Q
    ||||||| ||||||||||||||||| |||| | |||||      |||| ||||||||| ||||||||||||| ||| ||||||||||||||||| |||||    
T  51409973 gttatcatctatgaagcacggatacggaca-cggacacaaaacggacatgccgacacatctaataatttgaaaaaaatcacataattcagtgtaattaca 51410071  T
Q  262 agtgtcggtgtcg 274  Q
    |||||||||||||    
T  51410072 agtgtcggtgtcg 51410084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 10572656 - 10572581
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||| |||||||||||||  |||||||||||||| ||||| ||| | |||||||||| |||||||||    
T  10572656 gacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttgtgttggtg 10572581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 19058923 - 19058856
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| |||||||||| || | || ||||||||||||||| ||||||||||||||||||    
T  19058923 gacacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcg 19058856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 28273190 - 28273089
Alignment:
Q  177 ctatgaagcacggatacagaca--aca--gacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 271  Q
    ||||||||||||||||| ||||  |||  ||||| |||| || |||||||||||| ||||||| |||||| ||||||||||||| |||||||||||||||    
T  28273190 ctatgaagcacggatacggacatgacaaggacactgacatgctgacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtg 28273091  T
Q  272 tc 273  Q
    ||    
T  28273090 tc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 31672962 - 31672895
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||| |||||||| ||||||||||||| ||||||| |||||||||||| |||||||| |||||||||    
T  31672962 gacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtcg 31672895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 5944264 - 5944345
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaa--tcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||| ||||||||| |||| ||||||||||||| |||  ||||||||||||||||| ||| |||||||||||||||||    
T  5944264 acagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgt 5944345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 274
Target Start/End: Original strand, 18337338 - 18337388
Alignment:
Q  224 aataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 18337388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 21378570 - 21378635
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    ||||| |||||||| ||||||| ||||| |||| ||||||||||||||| ||||||||||||||||    
T  21378570 gacacaccgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 32434815 - 32434718
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacg-ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    ||||||||||||||||  |||| | ||||| |||||  |||||||||||||||||||||| || |||||||||||| |||| ||||||||||| ||||    
T  32434815 ctatgaagcacggatatggacaccggacactgacaccaccgacacaactaataatttgaaaaagtcacataattcattgtaattacaagtgtctgtgt 32434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 207 - 272
Target Start/End: Complemental strand, 32461530 - 32461465
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    ||||||||| |||||||||||||||||| ||||||||||||| | |||| |||||||||| |||||    
T  32461530 gacacgccggcacaactaataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgt 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 40917743 - 40917816
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||| ||||||||||||| |||||||  |||| |||||| |||||||| |||||||||||| ||||    
T  40917743 gacacgccgacacagctaataatttgaaaaaatcac--aattaagtgtaattacaagtctcggtgtcgtgtcggtg 40917816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 276
Target Start/End: Complemental strand, 18556548 - 18556454
Alignment:
Q  182 aagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg 276  Q
    |||||||||||| |||| | ||||| |||||||||||||| ||||||||||||| | ||||||||||| | |||| |||||||| | |||||||||    
T  18556548 aagcacggatacggaca-cggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagtattggtgtcgtg 18556454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 18190167 - 18190109
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||||| ||||||||||||| |||| ||||||||||||||| |||||||||||| ||||    
T  18190167 gacacacctaataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtc 18190109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 31015039 - 31015097
Alignment:
Q  211 cgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcgg 269  Q
    |||| ||||| ||||||||||||  |||||||||||||||||||| |||||||||||||    
T  31015039 cgcctacacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 36878453 - 36878519
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||||||||||||  ||||||||||||  |||||||||||||||||||| ||| | |||||||||||    
T  36878453 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 48450654 - 48450592
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcgg 269  Q
    |||||||| ||||| ||||||||||||| |||| |||||||| |||||| |||||||||||||    
T  48450654 gacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcgg 48450592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 5376566 - 5376497
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||||||  |||||||||| |  |||| ||||||||||||||| ||| |||||||||||||||||    
T  5376566 acacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgt 5376497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 17778549 - 17778613
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||| ||||||||||||| ||||||||||   ||||||| ||||||||||||||||||||| ||||    
T  17778549 gacacagctaataatttgaaaaaatcacata---cagtgtaattacaagtgtcggtgtcgtgtcggtg 17778613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 398832 - 398784
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    |||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  398832 gacacgccgacaccgctaataatttgaaaaaatcacataattcagtgta 398784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 12443527 - 12443479
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  12443527 gacacgccgacacagctaataatttgagaaaatcacataattcagtgta 12443479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 282
Target Start/End: Original strand, 25361881 - 25361953
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||| ||| |||||||||  |||||||||||||||||||| ||| | ||||| ||||||||| ||||    
T  25361881 acgccgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtg 25361953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 35702691 - 35702588
Alignment:
Q  177 ctatgaagcacggatacagacaacagacacgacac------gccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 270  Q
    ||||||||||||||||| |||| | ||||||||||      ||||||||| ||||||||||||| |  ||| |||||| |||||| ||||||||||| ||    
T  35702691 ctatgaagcacggatacggacaccggacacgacactgacatgccgacacagctaataatttgaaaacttcaaataattaagtgtaattacaagtgtcagt 35702592  T
Q  271 gtcg 274  Q
    ||||    
T  35702591 gtcg 35702588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 41877534 - 41877470
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||  ||||||||||||  |||| |||||||| |||||| ||||||||||||||||||    
T  41877534 acgccgacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcggtgtcg 41877470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 6427453 - 6427526
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa---tcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||| ||||||||||||||||||||||| |||   |||||||||||| ||||  |||||||||| |||||||||    
T  6427453 gacatgccgacacaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtcagtgtcgtgt 6427526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 9103632 - 9103698
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||  |||||||||||| ||||||||||||| ||| ||  |||||||||||||||||    
T  9103632 gacacgccgacacagttaataatttgaaaaaatcacataatttagttta-atacaagtgtcggtgtcg 9103698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 31694764 - 31694702
Alignment:
Q  222 ctaataatttgaagaaa--tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||| |||  |||||||||||||| || ||||||||||||||||||||| ||||    
T  31694764 ctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtg 31694702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 273
Target Start/End: Complemental strand, 43492582 - 43492495
Alignment:
Q  186 acggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||| ||||||| | |||||||||||||||||| |||| ||||||||  ||||||| |||||| ||||| |||   |||||||||||    
T  43492582 acggacacagacaccggacacgacacgccgacaccactagtaatttgagaaaatcacgtaattcggtgtaattatgtgtgtcggtgtc 43492495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 2896188 - 2896122
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||||||||||||  ||||||||||||  ||||||||||||||||||||| || |  ||||||||||    
T  2896188 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtc 2896122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 7918278 - 7918208
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||| ||||  |||||||||||||  |||||||||||||||||||| ||| | ||||| |||||||||    
T  7918278 gacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgt 7918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 13436451 - 13436517
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||  |||||||||| | ||||||||||||||||||||| ||| | |||| |||||||    
T  13436451 acacgccgacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcg 13436517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 34371734 - 34371780
Alignment:
Q  236 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||    
T  34371734 aaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtg 34371780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 35919347 - 35919273
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaa-----tcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||| |||||||| |||||||||||||||||     ||||||||||||||||| ||| ||||||| |||||||||    
T  35919347 acactccgacacatctaataatttgaagaaaaaaaatcacataattcagtgtaattataagtgtccgtgtcgtgt 35919273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 44482240 - 44482297
Alignment:
Q  225 ataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||  |||||||||||||||||||| ||| | ||||||||||||||| ||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtg 44482297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 5898368 - 5898267
Alignment:
Q  177 ctatgaagcacggatacagaca----acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 271  Q
    ||||| ||||||||||| ||||    |||||||| || ||||||||||  |||||||| |||| |||||||||||||||||||| ||| | | |||||||    
T  5898368 ctatgtagcacggatacggacatgacacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtg 5898269  T
Q  272 tc 273  Q
    ||    
T  5898268 tc 5898267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 13011283 - 13011223
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgt 266  Q
    |||| ||||||||| ||||||||||||| ||| |||||||||| |||||| ||||||||||    
T  13011283 gacatgccgacacagctaataatttgaaaaaaatcacataattaagtgtaattacaagtgt 13011223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 274
Target Start/End: Complemental strand, 14332714 - 14332642
Alignment:
Q  202 gacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||| ||| |||| |||||||||||||  ||||||||||||| |||||| ||| | || |||||||||    
T  14332714 gacacgacatgcccacaccactaataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcg 14332642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 21620946 - 21621014
Alignment:
Q  211 cgccgacacaactaataatttgaagaaa-----tcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||| |||||||||| ||||||||||||     ||||||||||||||||| ||||||| ||||||||||    
T  21620946 cgccaacacaactaaaaatttgaagaaaaaaaatcacataattcagtgtatttacaagcgtcggtgtcg 21621014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 23738676 - 23738716
Alignment:
Q  213 ccgacacaactaataatttgaagaaatcacataattcagtg 253  Q
    |||||||| ||||||||||||| ||||||||||||||||||    
T  23738676 ccgacacagctaataatttgaaaaaatcacataattcagtg 23738716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 34298428 - 34298476
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    ||||| ||||||| |||||||||||||  ||||||||||||||||||||    
T  34298428 gacacaccgacaccactaataatttgagaaaatcacataattcagtgta 34298476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 1262876 - 1262919
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattca 250  Q
    |||||||||||||| ||||||||||||  |||||||||||||||    
T  1262876 gacacgccgacacagctaataatttgagaaaatcacataattca 1262919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 1864941 - 1864882
Alignment:
Q  213 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    ||||||||  |||||||||||  |||||||||||||||||||| ||| | ||||||||||    
T  1864941 ccgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 9629952 - 9629897
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||||||  |||||| ||||||||||||  ||| |||||||||||||||||    
T  9629952 ctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgt 9629897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 18471297 - 18471355
Alignment:
Q  214 cgacacaactaataatttgaagaaa--tcacataattcagtgtagttacaagtgtcggt 270  Q
    ||||||| ||||||||||||| |||  |||||||||||||| || ||||||||||||||    
T  18471297 cgacacagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggt 18471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 6427342 - 6427412
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||| ||||  ||||||||||||  ||||||||||||||| |||| ||| | |||| ||||||||||    
T  6427342 gacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgt 6427412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 25272494 - 25272544
Alignment:
Q  227 aatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||  ||||||||||||| |||||| ||| |||||||||||||||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25272544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 30359371 - 30359441
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 268  Q
    |||||||| ||||| ||| ||||||| |||||||||| ||||||||||||| ||||||  | |||||||||    
T  30359371 acagacactgacacaccggcacaactgataatttgaaaaaatcacataatttagtgtaactgcaagtgtcg 30359441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 277
Target Start/End: Original strand, 2218264 - 2218301
Alignment:
Q  240 cacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  2218264 cacataatttagtgtaattacaagtgtcggtgtcgtgt 2218301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 3490457 - 3490396
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 268  Q
    |||||||||||||  ||||||||||||  |||  |||| |||||||||| ||||||||||||    
T  3490457 gacacgccgacactgctaataatttgagaaaactacattattcagtgtaattacaagtgtcg 3490396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 13997875 - 13997940
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    |||||||||||||   |||| |||| || |||||||||||||||||||| ||| | ||||||||||    
T  13997875 gacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 15323171 - 15323228
Alignment:
Q  223 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttgg 280  Q
    |||||||||||| ||||||||||||| |||||| ||  ||||||| || |||||||||    
T  15323171 taataatttgaaaaaatcacataatttagtgtaattgtaagtgtctgtatcgtgttgg 15323228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 15449279 - 15449231
Alignment:
Q  226 taatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    ||||||||| ||||||||||||| |||||| ||||||||||| |||||||    
T  15449279 taatttgaa-aaatcacataatttagtgtaattacaagtgtctgtgtcgt 15449231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 21366088 - 21366039
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    |||||||||| |||| |||||||||| || |||| |||||||||||||||    
T  21366088 cgacacgccggcacagctaataattttaaaaaataacataattcagtgta 21366039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 29144422 - 29144365
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 267  Q
    ||||||||||| ||||||||||||| |||  | ||||| ||||||| |||||||||||    
T  29144422 acgccgacacagctaataatttgaaaaaaatagataatgcagtgtaattacaagtgtc 29144365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 30173800 - 30173759
Alignment:
Q  236 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||| |||||| |||||||| |||||||||||||||||||||    
T  30173800 aaattacataactcagtgtaattacaagtgtcggtgtcgtgt 30173759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 5927392 - 5927340
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||| |||||| |||||| | |||| ||||||||||| ||||||    
T  5927392 ctaataatttgaaaaaatcatataatttaatgtaattacaagtgtcagtgtcg 5927340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 17754303 - 17754351
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    ||||| |||||||  ||||||||||||| |||| |||||||||||||||    
T  17754303 gacacaccgacaccgctaataatttgaaaaaattacataattcagtgta 17754351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 17831598 - 17831550
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    |||||||||||||  ||||||||||||  ||||||||| ||||||||||    
T  17831598 gacacgccgacaccgctaataatttgagaaaatcacattattcagtgta 17831550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 274
Target Start/End: Complemental strand, 24334737 - 24334705
Alignment:
Q  242 cataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| ||||||||||||||||||    
T  24334737 cataattcagtgtaattacaagtgtcggtgtcg 24334705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 40181878 - 40181930
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||  |||||||||||||||||||| ||| | || |||||||||    
T  40181878 ctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcg 40181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 40285706 - 40285646
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||  ||||| |||||||||||||||| | | |||||| |||||||| ||||    
T  40285706 ctaataatttgagaaaatcgcataattcagtgtagtcatatgtgtcgatgtcgtgtcggtg 40285646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 14674231 - 14674323
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcgg 269  Q
    |||||||||||||||||||||| | ||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||||    
T  14674231 ctatgaagcacggatacagaca-cggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 6247614 - 6247681
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  6247614 gacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 6247681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 21191123 - 21191056
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  21191123 gacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 21191056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 33178017 - 33178084
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||||||||||||| || ||||||||||||| |||||| ||||||||||||||||||    
T  33178017 gacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 33178084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 39698533 - 39698608
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| ||||    
T  39698533 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtg 39698608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 31084315 - 31084385
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| |||| |||||||||||| ||||||||    
T  31084315 gacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgt 31084385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 10298562 - 10298629
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    ||||||||||||||||||||||||||| || ||||||||| || |||| |||||||||||||||||||    
T  10298562 acacgccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcgt 10298629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 21351972 - 21351897
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||| |||||||||||||||||| ||| || ||||||||||||||||| ||||||||||||||||| ||| ||||    
T  21351972 gacacaccgacacaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtcatgtcggtg 21351897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 21522742 - 21522817
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||| |||||||||| || |||| ||||||||||||||| |||||| |||||||||||||| ||||    
T  21522742 gacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtg 21522817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 21533308 - 21533383
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||| |||||||||| || |||| ||||||||||||||| |||||| |||||||||||||| ||||    
T  21533308 gacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtg 21533383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 21542022 - 21542097
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||| |||||||||||||||||||| || | || ||||||||||||||| ||||||||||||||||||||| ||||    
T  21542022 gacatgccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtg 21542097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 42893352 - 42893418
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||| |||||||| ||||||||||||| |||||||||||| ||||||| |||||||||||||||||    
T  42893352 gacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtc 42893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 282
Target Start/End: Original strand, 7677703 - 7677772
Alignment:
Q  213 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||| ||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||| ||||    
T  7677703 ccgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtg 7677772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 13287465 - 13287396
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||| |||||||  |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  13287465 acacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgt 13287396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 281
Target Start/End: Original strand, 30183546 - 30183615
Alignment:
Q  212 gccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggt 281  Q
    ||||||||||||||||||||||| | ||||||| |||| || || |||||||||||||||||||||||||    
T  30183546 gccgacacaactaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtcgtgttggt 30183615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 21576809 - 21576745
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||||| |||||||||||| |||||    
T  21576809 acgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcg 21576745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 30135304 - 30135372
Alignment:
Q  206 cgacacgccgacacaactaataatttg-aagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||||||||||||||||||||||| || ||||||||||| ||| |||| |||||||||||||||||    
T  30135304 cgacacgccgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtgtcggtgtc 30135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 8420019 - 8420086
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||| | ||||||||||||| |||| |||||||||| |||| ||||||||||||||||||    
T  8420019 gacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtcg 8420086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 19579696 - 19579763
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||| | |||||||||||||||||||||    
T  19579696 acgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgt 19579763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 6035445 - 6035549
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    |||||||||||||||| |||||| |||||| |||||||||||||  |||||||||||| ||||| | ||||||||||||| ||| |  ||||||||||||    
T  6035445 ctatgaagcacggatatagacaa-agacactgacacgccgacaccgctaataatttga-gaaataatataattcagtgtaattatatttgtcggtgtcgt 6035542  T
Q  276 gttggtg 282  Q
    || ||||    
T  6035543 gtcggtg 6035549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 275
Target Start/End: Original strand, 41633727 - 41633795
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    ||||| |||||||| ||||||||||||| || | ||||||||||||||| |||||| ||||||||||||    
T  41633727 gacactccgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcgt 41633795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 7218334 - 7218271
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 270  Q
    |||||| ||||| | |||||||||| || |||||||||||||||||||| ||||||||||||||    
T  7218334 gacacgtcgacagagctaataatttaaataaatcacataattcagtgtaattacaagtgtcggt 7218271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 24906368 - 24906305
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 270  Q
    |||||||| |||||  |||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  24906368 gacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcggt 24906305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 43001762 - 43001856
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 271  Q
    ||||||||||||||||| |||| | ||||| |||| | ||||||  ||||||||||||| |||| ||||||||||||||| |||||||||| ||||    
T  43001762 ctatgaagcacggatacggaca-cggacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtg 43001856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 4105249 - 4105310
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa--tcacataattcagtgtagttacaagtgt 266  Q
    |||||||||||| ||||||||||||||| |||  ||||||||||||||||| ||||||||||    
T  4105249 gacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 15382469 - 15382538
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa--tcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| ||||||||||||| |||  ||| |||||||||| || ||||||||||||||||||    
T  15382469 gacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcggtgtcg 15382538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 41995454 - 41995525
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 271  Q
    |||||||| |||||||||||||||||||||||| ||| ||||||||||||||| |||| ||  |||||||||||    
T  41995454 acagacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatt--aagtgtcggtg 41995525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 15883982 - 15884047
Alignment:
Q  210 acgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||| | |||||||| || ||| ||||||||||||||||| ||||||||||||||||||    
T  15883982 acgccgacacagcaaataatttaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 15884047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 37328905 - 37328836
Alignment:
Q  213 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||| | ||||||||| | |||||||| ||||||||||| ||||| ||||||||||||||| ||||    
T  37328905 ccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtg 37328836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 5894903 - 5894830
Alignment:
Q  202 gacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||  |||||||||||||||||||| |||||| |||||| | | ||  ||||||||||||||||||||    
T  5894903 gacacgacacg--gacacaactaataatttgaaaaaatcatataatttaatctaactacaagtgtcggtgtcgtgt 5894830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 215 - 267
Target Start/End: Complemental strand, 15405114 - 15405062
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 267  Q
    |||||||||||||||||||| |||||| |||||||| |||| |||||||||||    
T  15405114 gacacaactaataatttgaaaaaatcatataattcaatgtaattacaagtgtc 15405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 19552610 - 19552537
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||||  |||||||||||| ||||||||||||| ||||||  || |||||||| |||||||| ||||    
T  19552610 gacacgccgacacagttaataatttgaaaaaatcacataattaagtgta--tataagtgtcgatgtcgtgtcggtg 19552537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 28588741 - 28588674
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||   |||||||||||  |||||||||||||||||||| ||| | ||||||||||||    
T  28588741 gacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcg 28588674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 3966495 - 3966565
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||| ||||||||  ||||||||||||  |||||||| ||||||||||| ||| | |||||||||||||||    
T  3966495 gacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgt 3966565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 12199951 - 12199997
Alignment:
Q  236 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||||||  | ||||||||||||||||||||||||||    
T  12199951 aaatcacataattcagtacaattacaagtgtcggtgtcgtgttggtg 12199997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 17177087 - 17177025
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    ||||| ||||| ||||||||||||| |||||| | |||||| |||| ||||||||||||||||    
T  17177087 acgccaacacagctaataatttgaaaaaatcaaaaaattcattgtaattacaagtgtcggtgt 17177025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 27144446 - 27144503
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    |||||||| |||||||||||||  |||||||||||| |||||||||||||| ||||||    
T  27144446 acagacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgta 27144503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 275
Target Start/End: Original strand, 40131624 - 40131681
Alignment:
Q  218 acaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    ||||||||||||||||| ||||||||||||||||| || ||| || | ||||||||||    
T  40131624 acaactaataatttgaaaaaatcacataattcagtttaattataaatatcggtgtcgt 40131681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 27932222 - 27932282
Alignment:
Q  202 gacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaa 262  Q
    |||||| |||||||||||  ||||||||||||  |||| ||||||||||||||| ||||||    
T  27932222 gacacgccacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaa 27932282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 43564875 - 43564940
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| |  |||||||| | ||||||||||||| |||||| ||| ||||||||||||||    
T  43564875 gacacgccgacacatc--ataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtcg 43564940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 2436878 - 2436984
Alignment:
Q  177 ctatgaagcacggatacagacaacagacacgaca------cgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 270  Q
    ||||||||||||||||| |||| | |||||||||      |||||||||  ||||||||||| | ||||||||||||||  |||  ||| | ||||||||    
T  2436878 ctatgaagcacggatacggacaccggacacgacactgacacgccgacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcggt 2436977  T
Q  271 gtcgtgt 277  Q
    |||||||    
T  2436978 gtcgtgt 2436984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 6471941 - 6471886
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||||||  |||||||||||||||||||| ||| | |||| ||||||||||    
T  6471941 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgt 6471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 22611804 - 22611761
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattca 250  Q
    |||||||||||||  ||||||||||||| |||||||||||||||    
T  22611804 gacacgccgacactcctaataatttgaaaaaatcacataattca 22611761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 36642829 - 36642754
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||||  |||||||||||| || | ||||| || ||||||  || ||||||||||||| ||||||||    
T  36642829 gacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaatataagtgtcggtgtcatgttggtg 36642754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 255
Target Start/End: Original strand, 9449429 - 9449509
Alignment:
Q  175 aactatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    |||||||||||||| |||| |||| | ||||| | ||||||||||| | |||||||||||  ||||||||||||||| ||||    
T  9449429 aactatgaagcacgaataccgaca-cggacactggcacgccgacaccaataataatttgagaaaatcacataattcaatgta 9449509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 14574117 - 14574068
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    |||||||||||||| | ||||||||||| ||||| | |||||||||||||    
T  14574117 cgacacgccgacacgagtaataatttgatgaaatgatataattcagtgta 14574068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 35017028 - 35017077
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    ||||||||||| || |||||||||||||  ||||||||||||| ||||||    
T  35017028 cgacacgccgaaaccactaataatttgagaaaatcacataatttagtgta 35017077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 267
Target Start/End: Complemental strand, 38464432 - 38464371
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 267  Q
    ||||| ||||||||||||||||||||||  ||||||||| ||||| || | ||| |||||||    
T  38464432 cgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattataagtgtc 38464371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 6326364 - 6326304
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 267  Q
    ||||||||||||   ||| ||||||||  |||| ||||||||||||||| |||||||||||    
T  6326364 gacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaattacaagtgtc 6326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 6770543 - 6770583
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  6770543 gacacaactaataatttaagaaaatcacataattcagtgta 6770583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 12159951 - 12160007
Alignment:
Q  214 cgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 270  Q
    |||||||||||||||||| || ||| ||||||||| | |||| |||||| |||||||    
T  12159951 cgacacaactaataatttaaaaaaaacacataatttaatgtaattacaaatgtcggt 12160007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 17088284 - 17088352
Alignment:
Q  215 gacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||| ||||||||||||| ||| |||||||||| |||||  |||||||||||  |||||||| ||||    
T  17088284 gacacatctaataatttgaaaaaaatcacataatttagtgtgattacaagtgtcactgtcgtgtcggtg 17088352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 22013406 - 22013454
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    |||||||||||||| ||||||||||| | |||| |||||||| ||||||    
T  22013406 gacacgccgacacagctaataatttggaaaaattacataatttagtgta 22013454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 30502440 - 30502388
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||  ||||||| |||||||||||| ||| | ||||||||||||    
T  30502440 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30502388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 30542783 - 30542731
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||  ||||||| |||||||||||| ||| | ||||||||||||    
T  30542783 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30542731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 36838550 - 36838606
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgtt 278  Q
    ||||||||||||  |||| |||||||| |||||| ||| | ||||||||||||||||    
T  36838550 ctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgtt 36838606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 7e-24; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 36756420 - 36756340
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgtt 278  Q
    |||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  36756420 acagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgtt 36756340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 37558939 - 37559036
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||||| |||| | ||||| |||||||||||||| ||||||||||| | ||||||||||||||| |||| ||||||||||||||||||    
T  37558939 ctatgaagcacggatacggaca-cggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 37559036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 19536465 - 19536397
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  19536465 gacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 15657857 - 15657928
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttg 279  Q
    |||||||||| |||||||||||||| | |||||||||||||||||||| |||||| ||||||||||||||||    
T  15657857 acacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgttg 15657928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 974746 - 974812
Alignment:
Q  214 cgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttgg 280  Q
    ||||||||||||||||||||| | ||||||| |||||||||| ||||||||||||||||||||||||    
T  974746 cgacacaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtcgtgttgg 974812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 12668490 - 12668420
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||    
T  12668490 gacacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgt 12668420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 37419704 - 37419810
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    ||||||||||||||||| |||| | ||||| ||||||||||||   | ||||||||||| |||||||| ||||||||||| ||||||||| |||||||||    
T  37419704 ctatgaagcacggatacggacaccggacactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgt 37419803  T
Q  276 gttggtg 282  Q
    || ||||    
T  37419804 gtcggtg 37419810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 15972865 - 15972932
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||| |||||||||||| |||| ||| ||||||||||| ||||||||||||||||||    
T  15972865 gacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcg 15972932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 18421955 - 18422022
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||| ||||||||| || | |||||||||||||||||| ||||||||||||||||||    
T  18421955 gacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtcg 18422022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 18841080 - 18841014
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||| |||||||||||||||||||| |||| |||||||| |||||| |||||||||||||||||    
T  18841080 gacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtc 18841014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 276
Target Start/End: Complemental strand, 20539741 - 20539672
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg 276  Q
    |||||| ||||||| ||||||||||||| |||||| |||||| |||||| ||||||||||||||||||||    
T  20539741 gacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcgtg 20539672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 30335411 - 30335476
Alignment:
Q  209 cacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||| |||||| |||||||||||    
T  30335411 cacgccgacacaactaataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtgtcg 30335476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 30404952 - 30404850
Alignment:
Q  177 ctatgaagcacggatacagaca----acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 271  Q
    ||||||||||||||||| ||||    || ||||| |||||||||||||   |||||||||||| |||||||||||||||||||| ||||||||||||| |    
T  30404952 ctatgaagcacggatacggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggcg 30404853  T
Q  272 tcg 274  Q
    |||    
T  30404852 tcg 30404850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 2438783 - 2438719
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||| |||||| |||||||||| || |||||||||||||||||||| ||||||||||||||||||    
T  2438783 acgctgacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 2438719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 23058510 - 23058434
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||| |||||| |||||||||||| ||| ||||||||| ||||||| ||||||||||||||||||||| ||||    
T  23058510 gacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaattacaagtgtcggtgtcgtgtcggtg 23058434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 30717591 - 30717527
Alignment:
Q  213 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||| | ||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||    
T  30717591 ccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgt 30717527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 11223930 - 11223855
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||| |||||| |||||| |||||| |||| ||||||||||||||| ||||||||||||||||| ||| ||||    
T  11223930 gacacgctgacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtcatgtaggtg 11223855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 21374765 - 21374706
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 267  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||||| |||||||||||    
T  21374765 acacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 38117226 - 38117159
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| ||||||||||||| |||||||||| ||| ||||| |||||||||| |||||||    
T  38117226 gacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgttggtgtcg 38117159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 33153416 - 33153486
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||| ||| ||||| |||| || |||||||||||||||||||| ||||||||||| |||||||||    
T  33153416 gacacgccgaaacatctaatgatttaaaaaaatcacataattcagtgtaattacaagtgtccgtgtcgtgt 33153486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 274
Target Start/End: Original strand, 20473305 - 20473381
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||| |||| |||||||||||||||||||| || || ||| ||||||||||||| |||||||||||| |||||    
T  20473305 acagacactgacatgccgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtcg 20473381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 24894381 - 24894451
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||||| |||||||||| || |||||||||||||||||| | ||| |||||| ||| ||||||    
T  24894381 gacacgccgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgttggtttcgtgt 24894451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 26769503 - 26769569
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||||||||||||||||||||||||||| | ||||||| ||   ||||| |||||||||||||||||    
T  26769503 gacacgccgacacaactaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtc 26769569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 5367198 - 5367251
Alignment:
Q  221 actaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||| ||||||||||||||||||||| ||| | ||||||||||||    
T  5367198 actaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcg 5367251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 12940994 - 12940941
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 268  Q
    |||||||||||||||||||| |||||| ||||||||||||| |||||| |||||    
T  12940994 gacacaactaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 274
Target Start/End: Original strand, 21624249 - 21624326
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatca-cataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||| |||||||||||||| |||||||||| || |||  | |||||||||||||| ||||||||||||||||||    
T  21624249 acagacactgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtgtcg 21624326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 44860327 - 44860387
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||  ||||| |||||||||||||| ||| | ||||||||||||||||||||    
T  44860327 ctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtg 44860387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 6940247 - 6940310
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 270  Q
    |||||||||||||| |||||||||| || || | |||||||| |||||| ||||||||||||||    
T  6940247 gacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggt 6940310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 14996291 - 14996224
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||| ||||||||| ||||||||||||| ||| ||| |||||| |||||| |||||||||||||||||    
T  14996291 gacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 14996224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 20242794 - 20242727
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||||||||  ||| |  |||||||||||||||||||| ||| | ||||||||||||    
T  20242794 gacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 20242727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 5040729 - 5040793
Alignment:
Q  212 gccgacacaactaataatttgaagaaa--tcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||| ||| ||||||||||||| |||  |||||||||||| |||| ||||||||||||||||||    
T  5040729 gccgatacagctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 5040793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 279
Target Start/End: Complemental strand, 21782885 - 21782815
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttg 279  Q
    |||||||||||||  ||||||||||||  |||||||||||||||||||| ||  | ||| |||||||||||||    
T  21782885 gacacgccgacactgctaataatttgagaaaatcacataattcagtgtaatt--atgtgccggtgtcgtgttg 21782815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 28677904 - 28677949
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||||    
T  28677904 acgccgacaccgctaataatttgaaaaaatcacataattcagtgta 28677949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 4882748 - 4882688
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||| ||||||| |||| | ||||||||||||| |||||||||||| |||||||| ||||    
T  4882748 ctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcgtgtcggtg 4882688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 21616754 - 21616802
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    |||||||||||||  ||||||||||||  ||||||||||||||||||||    
T  21616754 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 21616802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 18420501 - 18420431
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||| ||||  ||||||||||||  ||||||||||||||| || | ||| |||||||||||| ||||    
T  18420501 gacacgccaacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttgtgt 18420431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 34785049 - 34784979
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||| ||||||||||||||  ||| |  ||||||||||||| |||||| ||| | |||||||||||||||    
T  34785049 gacacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgt 34784979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 42832343 - 42832277
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||| |||||||  ||||||||||||  |||| ||||| ||||||||| ||| |||||||||||||    
T  42832343 gacacaccgacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 29367446 - 29367381
Alignment:
Q  199 acagacacg-acacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaa 262  Q
    ||||||||| |||||||| ||||| ||||||||| || ||| ||||||||||||||||| ||||||    
T  29367446 acagacacggacacgccggcacaattaataattttaaaaaaatcacataattcagtgtaattacaa 29367381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 38442309 - 38442366
Alignment:
Q  217 cacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||| |||| || ||||||||||||||| | || ||| ||||||||||||||    
T  38442309 cacaactaatgatttaaaaaaatcacataattcaatataattataagtgtcggtgtcg 38442366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 39323271 - 39323316
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtc 267  Q
    ||||||||||||  |||| ||||||||||||||| |||||||||||    
T  39323271 ctaataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 44635520 - 44635557
Alignment:
Q  237 aatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  44635520 aatcacgtaattcagtgtaattacaagtgtcggtgtcg 44635557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 18422582 - 18422526
Alignment:
Q  177 ctatgaagcacggatacagacaacagacacgacacgccgacacaactaataatttga 233  Q
    |||| ||||||||||||||||| |||||||||||| |||| ||  | ||||||||||    
T  18422582 ctataaagcacggatacagacatcagacacgacacaccgataccgcaaataatttga 18422526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 18622612 - 18622668
Alignment:
Q  221 actaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||||| |  |||||||||||||||||||| ||| | |||| ||||||||||    
T  18622612 actaataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgt 18622668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 23718018 - 23718082
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 271  Q
    ||||| |||||||  ||||||||||||  || ||||||||||||||||| ||| | |||||||||    
T  23718018 gacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 24105690 - 24105754
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 271  Q
    ||||| |||||||  ||||||||||||  || ||||||||||||||||| ||| | |||||||||    
T  24105690 gacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 29176559 - 29176495
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    |||||| ||||||  |||||||||||| |  ||||||||||||||||| ||| |||||| |||||    
T  29176559 acacgcagacacagttaataatttgaaaaggtcacataattcagtgtaattataagtgttggtgt 29176495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 34691857 - 34691805
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||  |||||| ||||||||||||| ||| | ||||||||||||    
T  34691857 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34691805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 34714269 - 34714217
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||  |||||| ||||||||||||| ||| | ||||||||||||    
T  34714269 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34714217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 20164 - 20239
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| ||||    
T  20164 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtg 20239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 12895211 - 12895113
Alignment:
Q  178 tatgaagcacggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||| ||||| |||| | ||||||||||||||| ||| ||||||||||||| |||||||||||||||  ||| |||||||||||||||||||||    
T  12895211 tatgaagcacagatacggaca-cggacacgacacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgt 12895113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 185 - 274
Target Start/End: Complemental strand, 54580111 - 54580023
Alignment:
Q  185 cacggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| | ||||||  |||| |||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||    
T  54580111 cacggatacagacaccggacacgg-acgctgacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 54580023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 19482651 - 19482730
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||| |||||||||||||||||||||||||||| | |||||||||||| ||||| |||||||||| ||||||||||    
T  19482651 acagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcgtgt 19482730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 23293053 - 23292986
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||    
T  23293053 gacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg 23292986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 274
Target Start/End: Original strand, 21945486 - 21945562
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||| |||| ||||||||| ||||||||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  21945486 acagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 21945562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 3947842 - 3947763
Alignment:
Q  199 acagacacg-acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||||| ||| ||||||||| ||||||||||||| ||||| |||||||||||||| ||||||||||| |||||||||    
T  3947842 acagacacggacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgt 3947763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 12797404 - 12797338
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||| || ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  12797404 gacacgccggcaaaactaataatttgaa-aaatcacataattcagtgtaattacaagtgtcggtgtcg 12797338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 30298910 - 30299008
Alignment:
Q  179 atgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtg 276  Q
    ||||||||| ||||| |||| | ||||| |||||||||||||| ||||||||||||| ||| | ||||||||||||||| ||||||||||||||||||||    
T  30298910 atgaagcacagatacggaca-cggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtg 30299008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 30327778 - 30327876
Alignment:
Q  179 atgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtg 276  Q
    ||||||||| ||||| |||| | ||||| |||||||||||||| ||||||||||||| ||| | ||||||||||||||| ||||||||||||||||||||    
T  30327778 atgaagcacagatacggaca-cggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtg 30327876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 11596445 - 11596349
Alignment:
Q  182 aagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||| || || |||| ||||||| || ||||| ||| | ||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  11596445 aagcacagacacggacaccagacactgatacgccaacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgt 11596349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 24543942 - 24544038
Alignment:
Q  177 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaat-cacataattcagtgtagttacaagtgtcggtg 271  Q
    |||||||||| |||||| |||| ||||||| ||||||||||||||||||||||||| || |||| ||| |||| || |||| |||||||||||||||    
T  24543942 ctatgaagcatggatacggacaccagacactgacacgccgacacaactaataatttaaaaaaatacacttaatgcattgtaattacaagtgtcggtg 24544038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 24613769 - 24613693
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||| ||||||||||||||||||||  ||||||||||||||| ||||  |||||||||||||||| ||| ||||    
T  24613769 cgacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtg 24613693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 49431017 - 49431085
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| ||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||    
T  49431017 gacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcg 49431085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 4383360 - 4383434
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||| ||| ||||||||||||||||| |||||||||||||||||||| |||||| |||| ||||||||| ||||    
T  4383360 gacacgtcgatacaactaataatttgaa-aaatcacataattcagtgtaattacaaatgtcagtgtcgtgtcggtg 4383434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 12895341 - 12895274
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||| |||||||||||| |||||||||||||  ||||| ||| ||||||||||||||    
T  12895341 gacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtcg 12895274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 16073387 - 16073453
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||| |||||| |||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  16073387 gacacgccaacacaagtaataatttgaa-aaatcgcataattcagtgtaattacaagtgtcggtgtcg 16073453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 40481629 - 40481687
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgt 266  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  40481629 gacacgccgatacaactaataatttgaa-aaatcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 29205451 - 29205501
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 29205501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 35158052 - 35157986
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||||||| |||||||||||||| | ||||||||||||| |||||| ||| |||||||||||||    
T  35158052 gacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtc 35157986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 6485677 - 6485613
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 272  Q
    |||||| |||| || |||||||||||| ||||||||||||| |||||| ||||||||||||||||    
T  6485677 acacgcagacaaaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 28084513 - 28084589
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||| |||| |||||||| ||| |||||||||||| |||| ||||||||||| ||||||||| ||||    
T  28084513 gacacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtctgtgtcgtgtcggtg 28084589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 28964300 - 28964248
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  28964300 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcg 28964248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 34306867 - 34306804
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||||||||||||| |||||| |||||  |||||| ||||||||||||||||||    
T  34306867 acgccgacacaactaataatttgaa-aaatcagataatgtagtgtaattacaagtgtcggtgtcg 34306804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 38847080 - 38847012
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||| |||||||| ||||||||||||| |||||| || |||||||||| ||||||||||| ||||||    
T  38847080 cgacactccgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtcagtgtcg 38847012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 42640518 - 42640588
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa---tcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| || |||||||||| |||   ||||||||||||||||| ||||||||||||||||||    
T  42640518 gacacgccgacacagctgataatttgaaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 42640588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 2362042 - 2361975
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||| |||||||| ||||||||||||| |||| |||||||| |||||| ||| ||||||||||||||    
T  2362042 gacacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcg 2361975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 4157150 - 4157208
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||||||||| ||||||||||||| |||| | ||||||||||||||||||    
T  4157150 gacacaactaataatttgaa-aaatcacataatttagtgcaattacaagtgtcggtgtcg 4157208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 27706244 - 27706173
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgtt 278  Q
    |||||| |||||||| ||||||||| || ||||||||||||| |||||| ||||||||||  ||||||||||    
T  27706244 gacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgtgagtgtcgtgtt 27706173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 50280873 - 50280945
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattca--gtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||||| ||||||||||||| || |||||||||| |  ||||| ||||||||| |||||||||||    
T  50280873 gacacgccgacacagctaataatttgaaaaattcacataattaagtgtgtaattacaagtgccggtgtcgtgt 50280945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 12708138 - 12708209
Alignment:
Q  207 gacacgccgacacaactaataatttg-aagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    ||||||| |||||||||||||||||  || |||| | ||||||||||||| |||||||||||| ||||||||    
T  12708138 gacacgcagacacaactaataatttttaaaaaatgaaataattcagtgtaattacaagtgtcgatgtcgtgt 12708209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 32273608 - 32273549
Alignment:
Q  192 acagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcag 251  Q
    ||||||| | |||| |||||||| ||||||||||||||||||| |||| |||||||||||    
T  32273608 acagacaccggacatgacacgccaacacaactaataatttgaaaaaataacataattcag 32273549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 47263978 - 47264053
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||| ||||| | ||||||||||| | |||||||||||||| ||||| |||||| ||||| |||| ||||||||    
T  47263978 gacacgtcgacatagctaataatttgtaaaaatcacataattctgtgtaattacaaatgtcgatgtcatgttggtg 47264053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 51701258 - 51701325
Alignment:
Q  215 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||| ||||||||||||| |||| |||||||| |||||| ||||||||||  ||||||||| ||||    
T  51701258 gacacagctaataatttgaaaaaattacataattgagtgtaattacaagtgttagtgtcgtgtcggtg 51701325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 715674 - 715608
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||| |||||||| |||||||||| || ||| ||||||||||||||||| |||||||||| ||||||    
T  715674 acacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtc 715608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 753000 - 752934
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||| |||||||| |||||||||| || ||| ||||||||||||||||| |||||||||| ||||||    
T  753000 acacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtc 752934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 16303333 - 16303263
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||| |  ||||| |||||| |||| | |||||| |||||| |||||||||||||||||||||    
T  16303333 gacacgccgacaaagataatattttgaaaaaatgatataatttagtgtaattacaagtgtcggtgtcgtgt 16303263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 274
Target Start/End: Complemental strand, 8423779 - 8423718
Alignment:
Q  213 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||  ||||||||||||  |||||||||||||||||||| ||| || |||||||||||    
T  8423779 ccgacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcg 8423718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 847958 - 848018
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||  |||| |||||||||| | || ||||||||||||||||| ||||||||    
T  847958 ctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtg 848018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 4672149 - 4672085
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||| |||||||||||   |||| |||||||||||||||| || | ||||||||||||    
T  4672149 acgccgacacagctaataatttgggaaaattacataattcagtgtagctatatgtgtcggtgtcg 4672085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 22234958 - 22234882
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||  |||| |||||||| ||| ||||||||||||||||| ||  | ||||||||||||||| ||||    
T  22234958 gacacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtg 22234882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 30982930 - 30982870
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||| ||||||  |||||||||| ||||||||| ||| ||||||||||||||||| ||||    
T  30982930 ctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtg 30982870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 36635316 - 36635364
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    |||||||| |||| |||||||||||||  ||||||||||||||||||||    
T  36635316 gacacgccaacaccactaataatttgagaaaatcacataattcagtgta 36635364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 11651201 - 11651142
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgt 266  Q
    |||||| ||||||| |||||||||| || |||||||||||||||||| |  |||||||||    
T  11651201 gacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgt 11651142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 15029757 - 15029824
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||| |||||  ||||||||||||| | |||||||||||||||||| ||| | |||| |||||||    
T  15029757 gacacgcagacactgctaataatttgaaaatatcacataattcagtgtaattatatgtgttggtgtcg 15029824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 6879503 - 6879465
Alignment:
Q  236 aaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  6879503 aaatcacataattaagtgtaattacaagtgtcggtgtcg 6879465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 40613442 - 40613504
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcgg 269  Q
    |||||||||||||  |||||| |||||  |||||||||||||||||||| ||| | |||||||    
T  40613442 gacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 14465133 - 14465088
Alignment:
Q  216 acacaactaataatttgaagaaatcacataattcagtgtagttaca 261  Q
    ||||| ||||||||||||| ||||||||||||||| |||| |||||    
T  14465133 acacacctaataatttgaaaaaatcacataattcaatgtaattaca 14465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 31800546 - 31800477
Alignment:
Q  206 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    |||||| |||||||| |||||||||| || |||| | |||||| | |||| |||||||||||||| ||||    
T  31800546 cgacacaccgacacagctaataattttaaaaaattaaataatttaatgtaattacaagtgtcggtatcgt 31800477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 28000779 - 28000743
Alignment:
Q  237 aatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  28000779 aatcatataattcagtgtaattacaagtgtcggtgtc 28000743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 37203271 - 37203315
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgt 266  Q
    ||||||||||||| |||| |||||||| |||||| ||||||||||    
T  37203271 ctaataatttgaaaaaatgacataatttagtgtaattacaagtgt 37203315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 38148777 - 38148717
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||| |||||  |||||||||||||||||||| ||  || ||||| |||||||||||||    
T  38148777 ctaatagtttgagaaaatcacataattcagtgtaattttaaatgtcgatgtcgtgttggtg 38148717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 14522 - 14580
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtg 265  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  14522 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 17815 - 17750
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||||| |||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  17815 acacgctgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 17750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 13392 - 13459
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| | ||||||| ||||||||||    
T  13392 gacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcg 13459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 21935 - 21868
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| | ||||||| ||||||||||    
T  21935 gacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcg 21868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 51803 - 51862
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgt 266  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||    
T  51803 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 46674 - 46741
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||| |||||| |||||||||||    
T  46674 gacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 46741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 178886 - 178819
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatca-cataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |||||    
T  178886 gacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtcagtgtc 178819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 192316 - 192256
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 267  Q
    |||||||||||||   |||||||||||  |||| ||||||||| ||||| |||||||||||    
T  192316 gacacgccgacaccgttaataatttgagaaaattacataattcggtgtaattacaagtgtc 192256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 241586 - 241661
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||| ||||||||||| | ||||||||||||| |||||| |||  |||||||||||||||||||||    
T  241586 gacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtg 241661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 526 - 462
Alignment:
Q  210 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||  ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  526 acgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 19568 - 19626
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgt 266  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  19568 gacacgccgatacaactaataatttgaa-aaatcacataattcagtgtaattacaagtgt 19626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 3900 - 3841
Alignment:
Q  223 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||| || |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtg 3841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 8002 - 8068
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||||||| ||| ||||||||||||||    
T  8002 gacacgccgacacaactaataatttgaaaaaatcatataatacagtgtaatta-aagtgtcggtgtcg 8068  T

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Target: scaffold0053 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 8790 - 8857
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||||||||| ||||||||||||| |||||| || ||| |||||| ||||||||||||||||||    
T  8790 gacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcg 8857  T

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Target: scaffold0450 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 8702 - 8632
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||| ||||||||||||||||||||||| | |||||||||||| || || |||||| ||||||||||||||    
T  8702 gacatgccgacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgt 8632  T

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Target: scaffold0227 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 266
Target Start/End: Complemental strand, 7403 - 7319
Alignment:
Q  177 ctatgaagcacggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgt 266  Q
    |||||||||||||||||||||     ||  |||||||||||||||||||||||||| | ||||||||||||| |||||| ||| ||||||    
T  7403 ctatgaagcacggatacagac-----accggacacgccgacacaactaataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

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Target: scaffold0066 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 33464 - 33375
Alignment:
Q  177 ctatgaagcacggatacagacaacagacacgaca----cgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaa 262  Q
    ||||||||||||||||  |||| | |||||||||    |||||||||| ||||||||||||| |||| ||||||||||||||| ||||||    
T  33464 ctatgaagcacggataaggacaccggacacgacagacacgccgacacagctaataatttgaaaaaataacataattcagtgtaattacaa 33375  T

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Target: scaffold0021 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 130474 - 130538
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 271  Q
    |||| |||||||||  ||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  130474 gacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 130538  T

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Target: scaffold0171 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 23403 - 23482
Alignment:
Q  199 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||| ||||||||||||||  |||||| |  || |||||||||||||||||||| ||| |||||||||||||||||    
T  23403 acagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgt 23482  T

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Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 9814 - 9739
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||| |||||| | |||||||||||||  ||||||| |||||||||||| ||| | ||||||||||||||||||||    
T  9814 gacatgccgacgccactaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtg 9739  T

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Target: scaffold0025 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 23777 - 23832
Alignment:
Q  223 taataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  23777 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 23832  T

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Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 71679 - 71792
Alignment:
Q  177 ctatgaagcacggatacagacaacagacacgacac------gccgacacaactaataatttgaagaaa--tcacataattcagtgtagttacaagtgtcg 268  Q
    ||||||||||||||||| |||| | ||||||||||      ||||||||| ||||||||||||| |||  ||||| ||||||||||| |||| ||||||     
T  71679 ctatgaagcacggatacggacatcggacacgacactgacacgccgacacagctaataatttgaaaaaaaatcacacaattcagtgtaattactagtgtca 71778  T
Q  269 gtgtcgtgttggtg 282  Q
    ||||||||| ||||    
T  71779 gtgtcgtgtcggtg 71792  T

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Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 92799 - 92874
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||||||  ||||||||||||  |||| ||||||||||||||| ||||||||||| || | |||||||||    
T  92799 gacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtcagttttgtgttggtg 92874  T

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Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 123617 - 123686
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaa---tcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||||||| ||||| |||||||||| || |||   ||||||||||||||||| |||||||||||||||||    
T  123617 gacacgccaacacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagtgtcggtgtc 123686  T

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Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 83172 - 83220
Alignment:
Q  227 aatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 275  Q
    ||||| || |||| ||||||||||||||| |||||| ||||||||||||    
T  83172 aatttaaaaaaatgacataattcagtgtaattacaaatgtcggtgtcgt 83220  T

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Target: scaffold0050 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 70277 - 70337
Alignment:
Q  214 cgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    |||||||  |||||||||||| |||| ||||||||||||||| ||| ||||||||||||||    
T  70277 cgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcg 70337  T

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Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 53172 - 53247
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    |||||||||| ||  | ||||||||||  |||||||||||||||||||| ||| ||||||||||| ||||| ||||    
T  53172 gacacgccgataccgccaataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtg 53247  T

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Target: scaffold0793 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 4950 - 4884
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    |||| |||||||| |||||||||| || ||| ||||||||||||||||| |||||||||| ||||||    
T  4950 acacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtc 4884  T

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Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 282
Target Start/End: Complemental strand, 44630 - 44517
Alignment:
Q  175 aactatgaagcacggatacagacaacagacacgacacg------ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 268  Q
    |||||||||||| ||||||||||| ||||||||||| |      | |||||  |||| |||||||  |||||||||||||||||||| ||| | ||||||    
T  44630 aactatgaagcatggatacagacaccagacacgacagggacaagctgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 44531  T
Q  269 gtgtcgtgttggtg 282  Q
    || |||||| ||||    
T  44530 gtatcgtgtcggtg 44517  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 135378 - 135309
Alignment:
Q  208 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||| |||||||  ||||||||||||  |||||||||||||| ||||| ||| | |||||||||||||||    
T  135378 acacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgt 135309  T

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Target: scaffold0722 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 7092 - 7032
Alignment:
Q  214 cgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||| ||||||||||||| |||| |||||||| ||| || |||||||||| |||||||    
T  7092 cgacacagctaataatttgaaaaaattacataatttagtataattacaagtgtaggtgtcg 7032  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 263424 - 263364
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 282  Q
    ||||||||||||  ||| |||||||||||||||| ||| ||||||| ||||||||| ||||    
T  263424 ctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtg 263364  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 63780 - 63831
Alignment:
Q  222 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 273  Q
    ||||||||||||  |||| ||||||||||||| | |||||||||||||||||    
T  63780 ctaataatttgagaaaattacataattcagtgcaattacaagtgtcggtgtc 63831  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 25819 - 25765
Alignment:
Q  223 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 277  Q
    |||||||| ||  ||||||||||||| |||||| ||| |||||||||||||||||    
T  25819 taataattagagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25765  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 26385 - 26446
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 268  Q
    |||||| |||||| |||||||||||||  ||||||||||||||| ||| |||| | ||||||    
T  26385 gacacgtcgacaccactaataatttgagaaaatcacataattcaatgtcgttatatgtgtcg 26446  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 274
Target Start/End: Complemental strand, 45563 - 45530
Alignment:
Q  241 acataattcagtgtagttacaagtgtcggtgtcg 274  Q
    ||||||||||||||| ||||||||||||||||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcg 45530  T

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Target: scaffold1528 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 1027 - 1075
Alignment:
Q  207 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 255  Q
    ||||| |||||||  ||||||||||||| |||| |||||||||||||||    
T  1027 gacacaccgacaccgctaataatttgaaaaaattacataattcagtgta 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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