View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11279_low_35 (Length: 280)

Name: NF11279_low_35
Description: NF11279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11279_low_35
NF11279_low_35
[»] chr5 (15 HSPs)
chr5 (202-279)||(18843991-18844068)
chr5 (201-279)||(27339962-27340040)
chr5 (200-279)||(22645501-22645580)
chr5 (199-277)||(6852339-6852417)
chr5 (200-279)||(41427695-41427774)
chr5 (201-279)||(15051872-15051950)
chr5 (201-279)||(41688441-41688519)
chr5 (201-278)||(20321220-20321297)
chr5 (200-249)||(23172218-23172267)
chr5 (200-280)||(18051307-18051387)
chr5 (200-279)||(19579219-19579299)
chr5 (200-279)||(43235144-43235223)
chr5 (201-279)||(19377879-19377957)
chr5 (242-279)||(15446410-15446447)
chr5 (201-278)||(43005634-43005711)
[»] chr7 (25 HSPs)
chr7 (201-279)||(17811624-17811702)
chr7 (201-279)||(5058804-5058882)
chr7 (201-279)||(24989549-24989627)
chr7 (199-278)||(25842504-25842583)
chr7 (200-279)||(10285677-10285756)
chr7 (203-278)||(20570662-20570737)
chr7 (201-279)||(44944620-44944698)
chr7 (200-276)||(4247635-4247711)
chr7 (203-279)||(8304362-8304438)
chr7 (208-279)||(27221690-27221762)
chr7 (200-279)||(8253958-8254037)
chr7 (200-278)||(11326560-11326638)
chr7 (201-279)||(5715561-5715635)
chr7 (202-279)||(9685070-9685147)
chr7 (199-279)||(1981098-1981178)
chr7 (202-280)||(4575005-4575083)
chr7 (201-278)||(22687042-22687119)
chr7 (201-278)||(26281165-26281240)
chr7 (239-278)||(17809005-17809044)
chr7 (225-279)||(1977824-1977878)
chr7 (201-279)||(14055533-14055610)
chr7 (201-279)||(14365561-14365638)
chr7 (221-278)||(17741921-17741980)
chr7 (201-253)||(21157475-21157527)
chr7 (199-279)||(39182432-39182512)
[»] chr6 (23 HSPs)
chr6 (199-279)||(11327335-11327415)
chr6 (200-279)||(7223791-7223870)
chr6 (200-279)||(19748609-19748688)
chr6 (206-280)||(31108430-31108504)
chr6 (200-278)||(22498214-22498292)
chr6 (73-171)||(6599776-6599870)
chr6 (201-279)||(3573674-3573753)
chr6 (199-279)||(7918123-7918203)
chr6 (199-275)||(17103475-17103551)
chr6 (199-279)||(17543503-17543583)
chr6 (204-279)||(26053074-26053149)
chr6 (204-279)||(26073127-26073202)
chr6 (201-278)||(30912181-30912258)
chr6 (200-279)||(21354951-21355030)
chr6 (204-279)||(27614434-27614509)
chr6 (200-278)||(27233073-27233151)
chr6 (219-279)||(15527903-15527963)
chr6 (200-278)||(17250335-17250412)
chr6 (199-279)||(23898086-23898166)
chr6 (23-73)||(6599690-6599741)
chr6 (239-278)||(20432406-20432445)
chr6 (199-253)||(8275318-8275372)
chr6 (244-278)||(18490522-18490556)
[»] chr2 (16 HSPs)
chr2 (199-279)||(20063999-20064079)
chr2 (200-279)||(19262090-19262169)
chr2 (199-278)||(20033995-20034074)
chr2 (201-278)||(25538920-25538997)
chr2 (211-279)||(27523881-27523949)
chr2 (200-279)||(19245865-19245944)
chr2 (200-279)||(21869095-21869174)
chr2 (198-279)||(974614-974696)
chr2 (201-279)||(30433091-30433169)
chr2 (200-275)||(31237750-31237825)
chr2 (201-279)||(1405059-1405137)
chr2 (199-279)||(7302058-7302138)
chr2 (201-279)||(8428498-8428576)
chr2 (242-279)||(21869215-21869252)
chr2 (236-273)||(34167571-34167608)
chr2 (242-279)||(34578087-34578124)
[»] chr4 (18 HSPs)
chr4 (200-279)||(9770388-9770467)
chr4 (199-279)||(6346728-6346808)
chr4 (202-278)||(23064737-23064813)
chr4 (200-279)||(7045220-7045299)
chr4 (199-279)||(5375941-5376021)
chr4 (200-279)||(55476264-55476343)
chr4 (233-279)||(8010943-8010989)
chr4 (201-279)||(36121099-36121177)
chr4 (202-279)||(13551448-13551525)
chr4 (204-280)||(46664152-46664228)
chr4 (208-279)||(8409792-8409863)
chr4 (200-279)||(18459405-18459484)
chr4 (201-277)||(9911186-9911262)
chr4 (199-279)||(10394886-10394966)
chr4 (200-279)||(7452781-7452860)
chr4 (200-254)||(24719869-24719923)
chr4 (201-279)||(37240515-37240593)
chr4 (210-275)||(13023838-13023903)
[»] chr3 (25 HSPs)
chr3 (200-279)||(8592173-8592252)
chr3 (201-280)||(22355841-22355920)
chr3 (200-279)||(20766675-20766754)
chr3 (200-279)||(28746052-28746131)
chr3 (201-279)||(24619972-24620050)
chr3 (199-276)||(29067555-29067632)
chr3 (199-279)||(8560230-8560310)
chr3 (200-280)||(13286219-13286299)
chr3 (221-279)||(30727654-30727712)
chr3 (204-278)||(39428184-39428258)
chr3 (200-265)||(24649523-24649588)
chr3 (202-278)||(19348830-19348906)
chr3 (208-279)||(3041499-3041570)
chr3 (200-279)||(41671455-41671534)
chr3 (205-278)||(13006102-13006174)
chr3 (200-280)||(6136343-6136423)
chr3 (208-279)||(9169871-9169942)
chr3 (201-279)||(17064583-17064661)
chr3 (201-279)||(18014267-18014345)
chr3 (201-278)||(10872490-10872567)
chr3 (199-280)||(25870095-25870176)
chr3 (205-278)||(27055370-27055443)
chr3 (199-279)||(3449083-3449163)
chr3 (200-279)||(22971085-22971163)
chr3 (204-279)||(27676712-27676787)
[»] chr8 (17 HSPs)
chr8 (201-279)||(24414062-24414140)
chr8 (205-279)||(45403305-45403379)
chr8 (199-279)||(11879876-11879956)
chr8 (199-279)||(11897292-11897372)
chr8 (198-278)||(40541592-40541672)
chr8 (200-279)||(7489057-7489136)
chr8 (203-252)||(5922351-5922400)
chr8 (199-279)||(6811095-6811175)
chr8 (201-277)||(31424442-31424518)
chr8 (208-279)||(16752299-16752370)
chr8 (221-280)||(19704252-19704311)
chr8 (210-279)||(2040395-2040464)
chr8 (200-279)||(29384086-29384165)
chr8 (201-279)||(17647273-17647351)
chr8 (201-272)||(23142457-23142528)
chr8 (199-278)||(26879787-26879866)
chr8 (199-271)||(22909977-22910048)
[»] chr1 (22 HSPs)
chr1 (209-279)||(9954816-9954886)
chr1 (200-280)||(13100465-13100545)
chr1 (203-279)||(16125232-16125308)
chr1 (199-279)||(25146541-25146621)
chr1 (200-279)||(9351837-9351916)
chr1 (202-279)||(21846050-21846127)
chr1 (219-280)||(19009741-19009802)
chr1 (200-279)||(42179845-42179924)
chr1 (201-279)||(14074258-14074336)
chr1 (200-253)||(9954770-9954823)
chr1 (200-280)||(17869524-17869604)
chr1 (200-279)||(17055694-17055772)
chr1 (200-279)||(23528932-23529011)
chr1 (203-271)||(17197306-17197374)
chr1 (199-280)||(13276032-13276110)
chr1 (200-253)||(18304592-18304645)
chr1 (240-280)||(12002751-12002791)
chr1 (200-280)||(12513546-12513626)
chr1 (199-271)||(41032546-41032618)
chr1 (236-279)||(16434785-16434828)
chr1 (200-279)||(27502129-27502208)
chr1 (199-264)||(30619232-30619296)
[»] scaffold0186 (1 HSPs)
scaffold0186 (199-278)||(8718-8797)
[»] scaffold0016 (1 HSPs)
scaffold0016 (200-279)||(56199-56278)
[»] scaffold0017 (1 HSPs)
scaffold0017 (199-274)||(38300-38375)
[»] scaffold0079 (1 HSPs)
scaffold0079 (199-279)||(14699-14779)
[»] scaffold2084 (1 HSPs)
scaffold2084 (199-279)||(104-184)
[»] scaffold0182 (1 HSPs)
scaffold0182 (208-280)||(24661-24733)
[»] scaffold0061 (1 HSPs)
scaffold0061 (200-272)||(76083-76155)
[»] scaffold0417 (1 HSPs)
scaffold0417 (239-279)||(7268-7308)


Alignment Details
Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 18844068 - 18843991
Alignment:
Q  202 aggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  18844068 aggttgtcaaaatcggaactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatc 18843991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 27339962 - 27340040
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||||||||||||||| || | ||||||||||||||||||| | |||| |||||||||||||||||    
T  27339962 aaggttgtcaaaatcggaactttacttcaagttgaaagggaatagcaaaatcgaaaatcgtgaaatcgcaatcaaaatc 27340040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 22645501 - 22645580
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||| ||||||||||||||| ||||  |||||||||||||||| |||| ||||||||| ||||||||||||    
T  22645501 caaggttgtcaaagtcggaactttacttctggtctaaagggaatagcaaaattgagactcgtaaaattgcaatcaaaatc 22645580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 6852339 - 6852417
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaa 277  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||||||||| || || |||||| ||||||||||    
T  6852339 ccaaggttgtcaaaatcgggacttcacttcaggtcgaaagggaatagcaaaatcgggactcataaaattgcaatcaaaa 6852417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 41427774 - 41427695
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||  ||||||||||  |||| |||||| ||||||||||| || ||||||||||||||||||||||    
T  41427774 caaggttgtcaaaatcgagactttacttcgagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatc 41427695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 15051872 - 15051950
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||| |||||||||| ||||||||||| |||| || ||| ||||||||||| || ||||||||||||||||||||||    
T  15051872 aaggttatcaaaatcgggactttacttcaagtcgaaaaggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatc 15051950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 41688441 - 41688519
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||| ||||||||| ||| || |||||||||||||||||| || || ||||||||||| |||||||    
T  41688441 aaggttgtcaaaatcgggactttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaaccaaaatc 41688519  T

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Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 20321297 - 20321220
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    |||||||||||||| || |||||||||||||||  || ||||||| ||||||| || || ||||||||||||||||||    
T  20321297 aaggttgtcaaaattgggactttacttcaggtcaaaaaggaatagtaaaatcgggactcataaaatcgcaatcaaaat 20321220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 23172218 - 23172267
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaa 249  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  23172218 caaggttgtcaaaatcggaactttacttcaggttgaaagggaatagcaaa 23172267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 18051307 - 18051387
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    |||||| ||||||||||| | ||||||| |||||| |||||||||| ||||||| || | ||| |||||||||||||||||    
T  18051307 caaggtagtcaaaatcgggattttactttaggtcgaaagggaatagaaaaatcgggacttgtagaatcgcaatcaaaatca 18051387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 19579299 - 19579219
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaat-agcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||| ||||||||||| | |||||||||||||| |||||| | |||||||| | || || |||||||||||||||||||    
T  19579299 caaggtagtcaaaatcgggattttacttcaggtcgaaagggagtaagcaaaattgggactcataaaatcgcaatcaaaatc 19579219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 43235223 - 43235144
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||| || ||||||||||  | || |||||||||||||||||   | || |||||||||||||||||||    
T  43235223 caaggttgtcaaaattgggactttacttcgagacgaaagggaatagcaaaatcagtactcataaaatcgcaatcaaaatc 43235144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 19377957 - 19377879
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||| || | ||||||||| | || | ||||||||||||||||||||| ||||||| |  |||||||||||    
T  19377957 aaggttgtcaaagtcagtactttactttaagtggaaagggaatagcaaaatcgagaatcgtaaatttacaatcaaaatc 19377879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 15446447 - 15446410
Alignment:
Q  242 atagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  15446447 atagcaaaatcgaaactcgtaaaatcgcaatcaaaatc 15446410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 278
Target Start/End: Original strand, 43005634 - 43005711
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    ||||||||||||||||| | ||| ||| || ||| |||| ||||| ||| |||| | | |||||||||||||||||||    
T  43005634 aaggttgtcaaaatcgggattttgctttagatcgaaaggaaatagaaaattcgaaaattgtaaaatcgcaatcaaaat 43005711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 17811702 - 17811624
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||| |||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||    
T  17811702 aaggttgtcaaaatcgggactttacttcaggtcaaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatc 17811624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 5058882 - 5058804
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||| |||||||||||| ||  ||||||||||||||||||  ||||||||||| ||||||||||||    
T  5058882 aaggttgtcaaaatcgggactttacttcagatcaaaagggaatagcaaaatcggaattcgtaaaattgcaatcaaaatc 5058804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 24989549 - 24989627
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||| |||||||| || ||||||||| ||||||||||||    
T  24989549 aaggttgtcaaaatcgggactttactttaggtcgaaagggaataacaaaatcgggactcgtaaaatggcaatcaaaatc 24989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 278
Target Start/End: Original strand, 25842504 - 25842583
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    |||||||| ||||||| || ||||||||||| |||| |||||| ||||||||||| || |||||||||||||||||||||    
T  25842504 ccaaggttatcaaaattgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaat 25842583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 10285677 - 10285756
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||| | |||||||||||||| ||| ||| || |||||| | | ||||||||||||||||||||||    
T  10285677 caaggttgtcaaaatcgggattttacttcaggtcgaaagagaagagaaaaatcaacaatcgtaaaatcgcaatcaaaatc 10285756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 20570662 - 20570737
Alignment:
Q  203 ggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    ||||||||||||||| ||| |||||||||| | ||||||||| |||||| |||| || ||||||||||||||||||    
T  20570662 ggttgtcaaaatcgggactctacttcaggttgaaagggaataacaaaattgagactcataaaatcgcaatcaaaat 20570737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 44944620 - 44944698
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||| |||||||||||| ||| |||| |||||||||  || || ||||||||||||||| ||||||    
T  44944620 aaggttgtcaaaatcgggactttacttcagatcgaaaggaaatagcaaatgcgggactcgtaaaatcgcaattaaaatc 44944698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 4247711 - 4247635
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaa 276  Q
    |||| |||||||||| || ||||||||||| |||| |||||||||  ||||| | ||||||||||||||||||||||    
T  4247711 caagattgtcaaaattgggactttacttcaagtcgaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaa 4247635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 8304438 - 8304362
Alignment:
Q  203 ggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||  ||||||||||| |||| ||| || ||||||||||| || |||||||||| |||||||||||    
T  8304438 ggttgtcaaaatcgagactttacttcaagtcgaaagagagtagcaaaatcgcgactcgtaaaatcacaatcaaaatc 8304362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 27221762 - 27221690
Alignment:
Q  208 tcaaaatcggaactttacttc-aggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||| |||||||||  |||||| ||| | |||||||||||| |||||||||||||||||||||||||    
T  27221762 tcaaaatcgggactttacttttaggtcgaaagagtatagcaaaatcgggattcgtaaaatcgcaatcaaaatc 27221690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 8253958 - 8254037
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||| ||||||| |  ||||||||| |  ||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  8253958 caaggttatcaaaattgatactttactttaaatcgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaatc 8254037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 278
Target Start/End: Complemental strand, 11326638 - 11326560
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    |||||||||||||||| |||||||| ||||||| | ||| |||||||||||| | || || ||||||| ||||||||||    
T  11326638 caaggttgtcaaaatcagaactttatttcaggtggaaagagaatagcaaaattgggactcttaaaatcacaatcaaaat 11326560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 5715635 - 5715561
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||| ||||||||    |||| |||| ||||| ||||||| || ||||||||||||||||||||||    
T  5715635 aaggttgtcaaaatcgggactttact----gtcgaaaggaaatagaaaaatcgggactcgtaaaatcgcaatcaaaatc 5715561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 9685070 - 9685147
Alignment:
Q  202 aggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||| || ||| | |||||||||| ||||| || |||||||||||||| ||| ||||||||||||||| ||||||    
T  9685070 aggttgtaaagatccggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatc 9685147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 1981098 - 1981178
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||| |||||||||| ||||||||||| |||| |||||| ||| ||||| |  | ||||||||||| ||||||||||    
T  1981098 ccaaggttatcaaaatcgggactttacttcaagtcgaaagggattagaaaaattggaactcgtaaaatcgtaatcaaaatc 1981178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 4575083 - 4575005
Alignment:
Q  202 aggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    ||||||||||||| |  | ||| |||||||| | |||||||||| |||||| | | |||||||||||||||||||||||    
T  4575083 aggttgtcaaaattgagatttttcttcaggttgaaagggaatagtaaaatcaaaaatcgtaaaatcgcaatcaaaatca 4575005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 278
Target Start/End: Original strand, 22687042 - 22687119
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    |||||||| |||||||| | ||| |||||| ||| ||| ||| ||||||||||||| |||||||||| ||| ||||||    
T  22687042 aaggttgttaaaatcgggattttgcttcagatcgaaagagaagagcaaaatcgagaatcgtaaaatcacaaccaaaat 22687119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 278
Target Start/End: Original strand, 26281165 - 26281240
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    ||||||||||||||| | ||||||||| |||||| || |||||||| ||||| ||  |||||||||||||||||||||    
T  26281165 aaggttgtcaaaatcaggactttactttaggtcgaaaaggaatagc-aaatc-aggatcgtaaaatcgcaatcaaaat 26281240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 17809005 - 17809044
Alignment:
Q  239 ggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  17809005 ggaatagcaaaatcgaaaatcgtaaaatcgcaatcaaaat 17809044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 1977878 - 1977824
Alignment:
Q  225 cttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||| ||| ||| || |||||||| | ||||||||||||||||||||||    
T  1977878 cttcaggtcgaaagagaagagaaaaatcgacaatcgtaaaatcgcaatcaaaatc 1977824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 14055610 - 14055533
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||||  ||| |||||||||| ||| ||  ||||||||||| | | |||||||||||| |||||||    
T  14055610 aaggttgtcaaaatcggat-tttgcttcaggtcgaaagagatgagcaaaatcgacaatggtaaaatcgcaaccaaaatc 14055533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 14365638 - 14365561
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||||  ||| |||||||||| ||| ||  ||||||||||| | | |||||||||||| |||||||    
T  14365638 aaggttgtcaaaatcggat-tttgcttcaggtcgaaagagatgagcaaaatcgacaatggtaaaatcgcaaccaaaatc 14365561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 17741980 - 17741921
Alignment:
Q  221 tttacttcaggtcggaagg--gaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    |||||||||||||| |||   ||||||||||||||| | ||||||||| |||||||||||    
T  17741980 tttacttcaggtcgaaagaaagaatagcaaaatcgaaaatcgtaaaattgcaatcaaaat 17741921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 21157475 - 21157527
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcg 253  Q
    |||||||| ||||| |||| |||||||||| ||  ||||||||||||||||||    
T  21157475 aaggttgttaaaattggaattttacttcagatcaaaagggaatagcaaaatcg 21157527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 39182512 - 39182432
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||||  | ||| |||||| ||  ||| ||| || |||||||| | |||||||||||||| |||||||    
T  39182512 ccaaggttgtcaaaatcgtgattttgcttcagttccaaagagaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatc 39182432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 11327335 - 11327415
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||||  ||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  11327335 ccaaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatc 11327415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 7223870 - 7223791
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||    
T  7223870 caaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaattgcaatcaaaatc 7223791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 19748688 - 19748609
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||| |||||| ||||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  19748688 caaggttgtcaaaatcgggactttaattcaggttgaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatc 19748609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 31108504 - 31108430
Alignment:
Q  206 tgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    |||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  31108504 tgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaatcgagattcgtaaaaccgcaatcaaaatca 31108430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 278
Target Start/End: Original strand, 22498214 - 22498292
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    ||||||||||||||| || |||||||||||||||| |||||||||||||||| | || |||||||||||||||||||||    
T  22498214 caaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaatcgcaatcaaaat 22498292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 73 - 171
Target Start/End: Original strand, 6599776 - 6599870
Alignment:
Q  73 aataatcagaaaaaatactatccgtaagtaacaaaagtaatattattttcatgtgcaaatagctgttaaaagacaaataaaaatgaatggagggagtat 171  Q
    |||||||||||||||||||||||     ||||||| |||||||||||||| |||||||||| | ||||||||||||||||||| ||| |||||||||||    
T  6599776 aataatcagaaaaaatactatcc----ataacaaaggtaatattattttcttgtgcaaataaccgttaaaagacaaataaaaaggaacggagggagtat 6599870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 3573674 - 3573753
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaa-gggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||| |||||||||||||||| || |||||||||||||||  || ||||||||||||||||||||||    
T  3573674 aaggttgtcaaaatcgggactttacttcaggtcgaaaagggaatagcaaaatcaggactcgtaaaatcgcaatcaaaatc 3573753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 7918123 - 7918203
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||| ||||  || ||||||||| ||||||||||||    
T  7918123 ccaaggttgtcaaaatcggggctttacttcaggtcgaaagggaatagcagaatcaggactcgtaaaattgcaatcaaaatc 7918203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 275
Target Start/End: Complemental strand, 17103551 - 17103475
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaa 275  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||| |||||||  || ||||||||||||||||||    
T  17103551 ccaaggttgtcaaaatcgggactttacttcaagtcgaaagggaataacaaaatcaggactcgtaaaatcgcaatcaa 17103475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 17543503 - 17543583
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||| ||||| || |||||||||||||||| || ||||||||||||||| || || |||||||| ||||||||||    
T  17543503 ccaaggttgttaaaattgggactttacttcaggtcgaaaaggaatagcaaaatcgggactcataaaatcgaaatcaaaatc 17543583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 26053074 - 26053149
Alignment:
Q  204 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||| | |||||||||||||||| |||| ||||||||||| | || |||||||||| |||||||||||    
T  26053074 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatc 26053149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 26073127 - 26073202
Alignment:
Q  204 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||| | |||||||||||||||| |||| ||||||||||| | || |||||||||| |||||||||||    
T  26073127 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatc 26073202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 278
Target Start/End: Original strand, 30912181 - 30912258
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    ||||||||||||||||||| ||| |||||||| | ||| ||||||||||||||| | |||||||||| ||| ||||||    
T  30912181 aaggttgtcaaaatcggaattttgcttcaggttgaaagagaatagcaaaatcgataatcgtaaaatctcaaccaaaat 30912258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 21355030 - 21354951
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||| || | ||||||||| || | |||||||||| ||||||  || ||||||||||||||||||||||    
T  21355030 caaggttgtcaaaattgggattttacttcaagttgaaagggaatagaaaaatcaggactcgtaaaatcgcaatcaaaatc 21354951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 27614434 - 27614509
Alignment:
Q  204 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||  | | |||||||||||||| |||||||||| ||||||| || |||||||||| |||||||||||    
T  27614434 gttgtcaaaattaggaatttacttcaggtcgaaagggaatagtaaaatcgggactcgtaaaatcacaatcaaaatc 27614509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 278
Target Start/End: Original strand, 27233073 - 27233151
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    |||||||||||||||||   ||||||||||||||  ||||||||  |||||||| || || ||||||||||||||||||    
T  27233073 caaggttgtcaaaatcgagcctttacttcaggtcaaaagggaatgacaaaatcgggactcataaaatcgcaatcaaaat 27233151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 15527903 - 15527963
Alignment:
Q  219 actttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||| |||| |||||||||||||  | ||| ||||||||||||||||||    
T  15527903 actttacttcaggtcgaaaggaaatagcaaaatcggaactcggaaaatcgcaatcaaaatc 15527963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 278
Target Start/End: Complemental strand, 17250412 - 17250335
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    ||||||| |||||||||| |||||||||||||||| |||| ||| ||  ||| | || |||||||||||||||||||||    
T  17250412 caaggttatcaaaatcgggactttacttcaggtcgaaaggaaatggc-gaattgggactcgtaaaatcgcaatcaaaat 17250335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 23898166 - 23898086
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||| ||||||||||||| | ||| |||||||||| | | ||| ||||||||||| | ||||||||||| || |||||||    
T  23898166 ccaagattgtcaaaatcgggattttgcttcaggtcgaatgagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatc 23898086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 6599690 - 6599741
Alignment:
Q  23 tatgatattgcatgaaa-ccaaaatgcaaggaaagcagaaagtgagcaacta 73  Q
    ||||||||||||||||| |||||||||||||||||||| ||||  |||||||    
T  6599690 tatgatattgcatgaaaaccaaaatgcaaggaaagcagcaagtctgcaacta 6599741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 20432406 - 20432445
Alignment:
Q  239 ggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  20432406 ggaatagcaaaatcgaaaatcgtaaaatcgcaatcaaaat 20432445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 8275318 - 8275372
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcg 253  Q
    |||||| |||||||||||||| ||| |||| ||| | ||||||||||||||||||    
T  8275318 ccaaggctgtcaaaatcggaattttgcttctggttgaaagggaatagcaaaatcg 8275372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 278
Target Start/End: Original strand, 18490522 - 18490556
Alignment:
Q  244 agcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    ||||||||||| |||||||||||||||||||||||    
T  18490522 agcaaaatcgaaattcgtaaaatcgcaatcaaaat 18490556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 20064079 - 20063999
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||||  ||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  20064079 ccaaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatc 20063999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 19262090 - 19262169
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||| ||||||||||||||||||| |||| | |||||||||||||||| || ||||||||||||||||||||||    
T  19262090 caaggttgtcgaaatcggaactttacttcaagtcgaatgggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatc 19262169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 278
Target Start/End: Original strand, 20033995 - 20034074
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    |||| ||| |||||||||| ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||||||||    
T  20033995 ccaaagttatcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaat 20034074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 278
Target Start/End: Original strand, 25538920 - 25538997
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||| ||||||| |  |||||||||||||||||||||    
T  25538920 aaggttgtcaaaatcggtactttacatcaggtcgaaagggaatagaaaaatcgggtctcgtaaaatcgcaatcaaaat 25538997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 279
Target Start/End: Original strand, 27523881 - 27523949
Alignment:
Q  211 aaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||| ||||||||||| |||| |||||| ||||||||||| || ||||||||||||||||||||||    
T  27523881 aaatcgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatc 27523949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 19245944 - 19245865
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||| | ||| ||||| || | ||||||||||||||||| | | ||||||||||||||||||||||    
T  19245944 caaggttgtcaaaatcgggattttgcttcaagttgaaagggaatagcaaaatcaaaaatcgtaaaatcgcaatcaaaatc 19245865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 21869095 - 21869174
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||| ||||||||||| ||||||||||| |||| |||||||||| ||||||| || || |||||||||||| ||||||    
T  21869095 caaggtcgtcaaaatcgggactttacttcaagtcgaaagggaatagaaaaatcgggactcttaaaatcgcaattaaaatc 21869174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 279
Target Start/End: Complemental strand, 974696 - 974614
Alignment:
Q  198 cccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatc-gagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||| |||| ||||| ||||||||||| |||| |||||| |||||||||| || | ||||||||||||||||||||||    
T  974696 cccaaggttatcaatatcgggactttacttcaagtcgaaagggagtagcaaaatcggaaactcgtaaaatcgcaatcaaaatc 974614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 30433169 - 30433091
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||| || ||||||||||||| || | ||||| ||||||| || || |||||||||||||||||||    
T  30433169 aaggttgtcaaaatcgggacattacttcaggtcgaaaagcaatagaaaaatcgggactcataaaatcgcaatcaaaatc 30433091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 275
Target Start/End: Original strand, 31237750 - 31237825
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaa 275  Q
    |||| ||||||||||| | |||||||||||| ||  |||||||||| ||||||| || ||||||||||||||||||    
T  31237750 caagattgtcaaaatcaggactttacttcagttcaaaagggaatagtaaaatcgggactcgtaaaatcgcaatcaa 31237825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 1405137 - 1405059
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||  |||||| || |||||  ||||||||||||||||||  | || |||||||||||||||||||    
T  1405137 aaggttgtcaaaatcgagactttaatttaggtcaaaagggaatagcaaaatcggtactcataaaatcgcaatcaaaatc 1405059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 7302138 - 7302058
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||| |||||||||| ||||||||||| || | | |||  ||||||||||| || ||||||||| ||||||||||||    
T  7302138 ccaaggttatcaaaatcgggactttacttcaagttgaaggggggtagcaaaatcgggactcgtaaaattgcaatcaaaatc 7302058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 8428576 - 8428498
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||| | ||| ||| |||||| |||||||||| |||||| | | |  |||||||||||||||||||    
T  8428576 aaggttgtcaaaatcgggattttgctttaggtcgaaagggaatagaaaaatcaaaaattctaaaatcgcaatcaaaatc 8428498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 21869215 - 21869252
Alignment:
Q  242 atagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  21869215 atagcaaaatcgagactcgtaaaatcccaatcaaaatc 21869252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 34167608 - 34167571
Alignment:
Q  236 aagggaatagcaaaatcgagattcgtaaaatcgcaatc 273  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  34167608 aagggaatagcaaaatcgaaaatcgtaaaatcgcaatc 34167571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 34578124 - 34578087
Alignment:
Q  242 atagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||| || ||||||||||||||||||||||    
T  34578124 atagcaaaatcgggactcgtaaaatcgcaatcaaaatc 34578087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 9770467 - 9770388
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||| ||||||||| |||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  9770467 caaggttgtcaaaatcgggactttactttaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatc 9770388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 6346728 - 6346808
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||| ||||||||||| | |||||||||| |||||||||||    
T  6346728 ccaaggttgtcaaaatcggaaatttgcttcaggtcgaaagggaagagcaaaatcgaaaatcgtaaaatcacaatcaaaatc 6346808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 23064737 - 23064813
Alignment:
Q  202 aggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    |||||||||||||||| |||||||||||||||| ||||||||| | ||||||  | |||||||||||||||||||||    
T  23064737 aggttgtcaaaatcgggactttacttcaggtcgaaagggaataacgaaatcggaactcgtaaaatcgcaatcaaaat 23064813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 7045299 - 7045220
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||| |||| |||||||||||||| ||||||| ||||||||| | | || |||||||||||||||||||    
T  7045299 caaggttgtcaaaataggaattttacttcaggtcgaaagggaagagcaaaatcaaaaatcataaaatcgcaatcaaaatc 7045220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 5376021 - 5375941
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||| || |||||||||||||||  ||   ||||| ||||||| || ||||||||||||||||||||||    
T  5376021 ccaaggttgtcaaaattgggactttacttcaggtcaaaaataaatagtaaaatcgggactcgtaaaatcgcaatcaaaatc 5375941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 55476343 - 55476264
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||| |||||||||| ||||||||||| |||| |||||| ||  |||||||  | ||||||||||||||||||||||    
T  55476343 caaggttatcaaaatcgggactttacttcaagtcgaaagggagtaataaaatcggtactcgtaaaatcgcaatcaaaatc 55476264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 8010943 - 8010989
Alignment:
Q  233 cggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||    
T  8010943 cggaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatc 8010989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 36121177 - 36121099
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||  |||||||||| || | |||||||||||  ||||| || ||||||||||| ||||||||||    
T  36121177 aaggttgtcaaaatcgggtctttacttcaagttgaaagggaatagcttaatcgggactcgtaaaatcggaatcaaaatc 36121099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 13551448 - 13551525
Alignment:
Q  202 aggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||| || ||| | |||||||||| ||||| || |||||||||||||| ||| ||||||||||||||| ||||||    
T  13551448 aggttgtaaagatccggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatc 13551525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 46664152 - 46664228
Alignment:
Q  204 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    ||||||||||| || | ||| |||||||||| || | |||||||||||||| | ||| |||||||||||||||||||    
T  46664152 gttgtcaaaattgggattttgcttcaggtcgaaaagaaatagcaaaatcgaaaatcggaaaatcgcaatcaaaatca 46664228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 8409863 - 8409792
Alignment:
Q  208 tcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||| ||||||||||| || | |||||| ||||||||| ||||||  |||||||| ||||||||||    
T  8409863 tcaaaatcgggactttacttcaagttgaaagggagtagcaaaattgagatttataaaatcgtaatcaaaatc 8409792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 18459405 - 18459484
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||  | ||| |||||||| | |||| || ||||||||||| | ||||||||||||||| ||||||    
T  18459405 caaggttgtcaaaatcgagattttgcttcaggttgaaaggaaagagcaaaatcgacaatcgtaaaatcgcaattaaaatc 18459484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 277
Target Start/End: Original strand, 9911186 - 9911262
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaa 277  Q
    |||| |||||||||  | |||||||||||  ||| |||||||||| ||||||| || ||||||||||||||| ||||    
T  9911186 aagggtgtcaaaattaggactttacttcatatcgaaagggaatagtaaaatcgggactcgtaaaatcgcaataaaaa 9911262  T

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Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 10394966 - 10394886
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||| |||| ||| ||||| || | || | || ||||||||| | | ||||||||||||||||||||||    
T  10394966 ccaaggttgtcaaaattggaattttgcttcaagttgaaaagaaagagcaaaatcaaaaatcgtaaaatcgcaatcaaaatc 10394886  T

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Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 7452860 - 7452781
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||  | | ||| |||||||||| ||||||| || ||| | || | ||||||||||||||||||||||    
T  7452860 caaggttgtcaaaattaggattttgcttcaggtcgaaagggaagagaaaagttgaaaatcgtaaaatcgcaatcaaaatc 7452781  T

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Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 24719923 - 24719869
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcga 254  Q
    |||||||||||||||||  | ||| |||||||||| ||||||| |||||||||||    
T  24719923 caaggttgtcaaaatcgagattttgcttcaggtcgaaagggaagagcaaaatcga 24719869  T

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Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 37240593 - 37240515
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||  ||  ||| ||||||| || ||| ||| ||| ||||||| | ||||||||||||||||||||||    
T  37240593 aaggttgtcaaaattagagttttgcttcaggacgaaagagaagagctaaatcgacaatcgtaaaatcgcaatcaaaatc 37240515  T

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Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 13023903 - 13023838
Alignment:
Q  210 aaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaa 275  Q
    ||||| || ||||||||||| |||| ||| ||||||||||||||  | |||||||||| |||||||    
T  13023903 aaaattgggactttacttcaagtcgaaagagaatagcaaaatcggaactcgtaaaatcacaatcaa 13023838  T

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Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 8592173 - 8592252
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||| ||||||| ||||||||||| |||| |||| |||||||||||||||| ||||||||||||||||||||||    
T  8592173 caaggttgtcgaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgagactcgtaaaatcgcaatcaaaatc 8592252  T

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Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 280
Target Start/End: Original strand, 22355841 - 22355920
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    |||||| |||||||||||||||||| |||||||| || ||||||||||||||| || |||||||||||||||||||||||    
T  22355841 aaggttctcaaaatcggaactttacatcaggtcgaaatggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatca 22355920  T

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Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 20766675 - 20766754
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||| |||||||||||  ||| ||| || |||||||||||||| ||||||||||||||||||||||    
T  20766675 caaggttgtcaaaatcgggactttacttcaactcgaaagagagtagcaaaatcgagactcgtaaaatcgcaatcaaaatc 20766754  T

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Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 28746131 - 28746052
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||| || |||||||||||||||| |||  ||||||||||||| || ||||||||||||||||||||||    
T  28746131 caaggttgtcaaaattgggactttacttcaggtcgaaagaaaatagcaaaatcgggactcgtaaaatcgcaatcaaaatc 28746052  T

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Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 24619972 - 24620050
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||||||||||||||| |||  |||||||||||||||| | || | ||||||||||||||||||||    
T  24619972 aaggttgtcaaaatcggaactttacttcaagtcaaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatc 24620050  T

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Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 276
Target Start/End: Complemental strand, 29067632 - 29067555
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaa 276  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||  | || ||||||| ||||||||    
T  29067632 ccaaggttgtcaaaatcggaactttacttcaggtcgaatgggaatagcaaaatcggaactcataaaatctcaatcaaa 29067555  T

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Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 8560230 - 8560310
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||| |||||||||| ||||||||||| |||  |||||| |||||||||||||| |||| |||||||||||||||||    
T  8560230 ccaaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgagactcgtgaaatcgcaatcaaaatc 8560310  T

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Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 13286299 - 13286219
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    ||||||||||||||||  || ||| |||||||||||||||||| || |||||| | | |||||||||||||||||||||||    
T  13286299 caaggttgtcaaaatcacaattttgcttcaggtcggaagggaagagaaaaatcaaaactcgtaaaatcgcaatcaaaatca 13286219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 30727654 - 30727712
Alignment:
Q  221 tttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||| | ||||||||||||||||||||| || |||||||||||||||||||    
T  30727654 tttacttcaggttgaaagggaatagcaaaatcgagactcctaaaatcgcaatcaaaatc 30727712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 39428258 - 39428184
Alignment:
Q  204 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    |||||||||||||| |||||||||  ||| | |||||||||||||||||| || || ||||||||||||||||||    
T  39428258 gttgtcaaaatcgggactttacttgcggttgaaagggaatagcaaaatcgggactcataaaatcgcaatcaaaat 39428184  T

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Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 24649523 - 24649588
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaa 265  Q
    ||||||||||||||| || |||||||||||||||| |||||||||||||||| | || ||||||||    
T  24649523 caaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaa 24649588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 19348906 - 19348830
Alignment:
Q  202 aggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    ||||| ||||||| |  ||||||||||| |||  |||||| |||||||||||||| |||||||||||||||||||||    
T  19348906 aggttatcaaaattgagactttacttcaagtcaaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaat 19348830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 3041570 - 3041499
Alignment:
Q  208 tcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||| | ||||||||| |||| || ||| ||||||||||| || ||||||||||||||||||||||    
T  3041570 tcaaaatcgggattttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatc 3041499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 41671534 - 41671455
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||| | ||| |||||||||| ||| ||| ||||||||||| | | |||||||||||| |||||||    
T  41671534 caaggttgtcaaaatcgggattttgcttcaggtcgaaagagaagagcaaaatcgataattgtaaaatcgcaaccaaaatc 41671455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 13006174 - 13006102
Alignment:
Q  205 ttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    ||||||||||||| | ||| ||| |||||| |||||||||||||||| || | |||||||||||||||||||||    
T  13006174 ttgtcaaaatcggga-tttgctttaggtcgaaagggaatagcaaaattgaaaatcgtaaaatcgcaatcaaaat 13006102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 6136343 - 6136423
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    |||| |||||||||||  || ||| |||||  ||||||||||| ||||||||| | | |||||||||||||||||||||||    
T  6136343 caagtttgtcaaaatcacaattttgcttcatatcggaagggaaaagcaaaatcaaaaatcgtaaaatcgcaatcaaaatca 6136423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 9169942 - 9169871
Alignment:
Q  208 tcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||||||| |||| |||| | ||||||||| | ||  |||||||| ||||||||||||    
T  9169942 tcaaaatcggaactttacttcaagtcgaaaggaagtagcaaaattgggacccgtaaaattgcaatcaaaatc 9169871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 17064661 - 17064583
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||| || | ||| |||||||||| |||  || | ||||||||| | ||||||||||||||||||||||    
T  17064661 aaggttgtcaaaattgggattttgcttcaggtcgaaagaaaagatcaaaatcgacaatcgtaaaatcgcaatcaaaatc 17064583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 18014345 - 18014267
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||| |||||||||| ||||||||||| ||   || ||| ||||||||| | || ||||||||||||||||||||||    
T  18014345 aaggttatcaaaatcgggactttacttcaagttaaaatggagtagcaaaattgggactcgtaaaatcgcaatcaaaatc 18014267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 278
Target Start/End: Original strand, 10872490 - 10872567
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    ||||||||||||||| | | |||||||||||||  ||||||| || |||||| | | || ||||||||||||||||||    
T  10872490 aaggttgtcaaaatcaggattttacttcaggtcaaaagggaagagaaaaatcaaaaatcataaaatcgcaatcaaaat 10872567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 25870095 - 25870176
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    ||||||||||||||||||  | ||| ||| |||||| ||| ||| || |||||||| | |||||||||||||| ||||||||    
T  25870095 ccaaggttgtcaaaatcgagattttgctttaggtcgaaagagaagagtaaaatcgacaatcgtaaaatcgcaaccaaaatca 25870176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 27055443 - 27055370
Alignment:
Q  205 ttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    ||||||||||||||| ||||||||||||   |||| ||||| |||||||  | ||||||||||||||| |||||    
T  27055443 ttgtcaaaatcggaattttacttcaggtaaaaaggaaatagtaaaatcgcaaatcgtaaaatcgcaattaaaat 27055370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 3449083 - 3449163
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||| || | ||| ||| |||| | ||| ||| ||||||||||| | |||||||||||||| |||||||    
T  3449083 ccaaggttgtcaaaattgggattttgctttaggttgaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatc 3449163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 22971163 - 22971085
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||| ||||||| || ||||||||||| ||   |||| | ||||||||||| || ||||||||||||||||||||||    
T  22971163 caaggttatcaaaattgggactttacttcaagttaaaagg-agtagcaaaatcgggactcgtaaaatcgcaatcaaaatc 22971085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 27676787 - 27676712
Alignment:
Q  204 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||| |||||| | | ||| ||||| |||| ||||||| ||||||||||| | || |||||||||||||||||||    
T  27676787 gttgttaaaatcaggattttgcttcaagtcgaaagggaagagcaaaatcgaaaatcttaaaatcgcaatcaaaatc 27676712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 24414062 - 24414140
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||||||  ||| ||||||||||||||||||||||    
T  24414062 aaggttgtcaaaattggaactttacttcatgtcgaaagggaatagcaaaatttagactcgtaaaatcgcaatcaaaatc 24414140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 279
Target Start/End: Complemental strand, 45403379 - 45403305
Alignment:
Q  205 ttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||| |||||| |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  45403379 ttgtcaaaatcgggactttatttcacgtcgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatc 45403305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 11879956 - 11879876
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||||| | |||||||||||||  |||||||||| |||||||  | ||||||||||||||||||||||    
T  11879956 ccaaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatc 11879876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 11897372 - 11897292
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||||| | |||||||||||||  |||||||||| |||||||  | ||||||||||||||||||||||    
T  11897372 ccaaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatc 11897292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 40541592 - 40541672
Alignment:
Q  198 cccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    ||||||||| |||||||||| ||||||||||| |||| |||| | ||||||||||| || |||||||||||||||||||||    
T  40541592 cccaaggttatcaaaatcgggactttacttcaagtcgaaaggaagtagcaaaatcgggactcgtaaaatcgcaatcaaaat 40541672  T

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Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 7489057 - 7489136
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||| | ||||||||||| |||| |||| |||||||||||   || ||||||||||||||||||||||    
T  7489057 caaggttgtcaaaatcaggactttacttcaagtcgaaaggaaatagcaaaattaggactcgtaaaatcgcaatcaaaatc 7489136  T

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Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 5922400 - 5922351
Alignment:
Q  203 ggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatc 252  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  5922400 ggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatc 5922351  T

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Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 6811175 - 6811095
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||||||||||  ||||  ||| ||| ||| ||||||||||| | |||||||||||||| |||||||    
T  6811175 ccaaggttgtcaaaatcggaactttgtttcaaatcgaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatc 6811095  T

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Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 277
Target Start/End: Complemental strand, 31424518 - 31424442
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaa 277  Q
    ||||||||||||||||  | |||||||||||||| ||| ||  ||||||||||| | ||||||||||||||||||||    
T  31424518 aaggttgtcaaaatcgagattttacttcaggtcgaaagagatgagcaaaatcgacaatcgtaaaatcgcaatcaaaa 31424442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 16752370 - 16752299
Alignment:
Q  208 tcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| | || |||||||||||||| |||||||    
T  16752370 tcaaaattggaactttacttcaagtcgaaagggagtagcaaaattgggactcgtaaaatcgcaaacaaaatc 16752299  T

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Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 19704252 - 19704311
Alignment:
Q  221 tttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    ||||||||| |||  |||||||||||||||||| || |||||||||||||||||||||||    
T  19704252 tttacttcaagtccaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatca 19704311  T

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Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 2040464 - 2040395
Alignment:
Q  210 aaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||| ||||||||||| |||| ||| || |||||||||||  | ||||||||||||||||||||||    
T  2040464 aaaatcgggactttacttcaagtcgaaagagagtagcaaaatcggaactcgtaaaatcgcaatcaaaatc 2040395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 29384086 - 29384165
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||| | ||| |||||||||| |||  || || |||||||| | |||||||||||||| |||||||    
T  29384086 caaggttgtcaaaatcgggattttgcttcaggtcgaaagaaaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatc 29384165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 17647351 - 17647273
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||| |||||||| | ||| |||||||||| ||| ||  ||||||||||| | || |||||||||||||||||||    
T  17647351 aaggttgttaaaatcgggattttgcttcaggtcgaaagagatgagcaaaatcgacaatcataaaatcgcaatcaaaatc 17647273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 23142528 - 23142457
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaat 272  Q
    ||||||||||||||| | |||||| ||||  ||| ||||||||||||||| ||  | |||||||||||||||    
T  23142528 aaggttgtcaaaatcaggactttatttcaattcgaaagggaatagcaaaaccggtaatcgtaaaatcgcaat 23142457  T

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Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 26879866 - 26879787
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    |||||||||||||| |||  | |||| ||||||| | ||||||  ||||||||| | | |||||||||||||||||||||    
T  26879866 ccaaggttgtcaaagtcgtgattttagttcaggttgaaagggatcagcaaaatcaaaaatcgtaaaatcgcaatcaaaat 26879787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 22909977 - 22910048
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaa 271  Q
    ||||||||||||||||||| | ||||| ||| |||| ||| ||| || |||||||| | ||||||||||||||    
T  22909977 ccaaggttgtcaaaatcgg-attttacatcatgtcgaaagagaagagaaaaatcgacaatcgtaaaatcgcaa 22910048  T

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Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 9954816 - 9954886
Alignment:
Q  209 caaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  9954816 caaaatcggaactttacttaaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatc 9954886  T

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Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 13100545 - 13100465
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||  | |||||||||||||||||||||||    
T  13100545 caaggttgtcaaaatcgggactttacttcaagtcgaaagggaatggcaaaatcggaactcgtaaaatcgcaatcaaaatca 13100465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 16125232 - 16125308
Alignment:
Q  203 ggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||| ||||||||||||||||||||||||| |||||||||| ||||| | || ||||||||||||||||||||||    
T  16125232 ggttgttaaaatcggaactttacttcaggtcgaaagggaatagtaaaattgggactcgtaaaatcgcaatcaaaatc 16125308  T

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Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 25146541 - 25146621
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||| | |||||||||||||| | ||||||||||||||||||  | ||||||||||||||||||||||    
T  25146541 ccaaggttgtcaaaatcaggactttacttcaggttgaaagggaatagcaaaatcggaaatcgtaaaatcgcaatcaaaatc 25146621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 9351837 - 9351916
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||   |||||||||||||||| ||| |||||||||||||| || ||||||||||||||||||||||    
T  9351837 caaggttgtcaaaatcaagactttacttcaggtcgaaagcgaatagcaaaatcgggactcgtaaaatcgcaatcaaaatc 9351916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 21846050 - 21846127
Alignment:
Q  202 aggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||| | |||||||| ||||||| |||||||||||||||||| || || |||||||||||||||||||    
T  21846050 aggttgtcaaaatcaggactttactccaggtcgaaagggaatagcaaaatcgggactcttaaaatcgcaatcaaaatc 21846127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 19009741 - 19009802
Alignment:
Q  219 actttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    |||||||||||| ||| |||||||||||||||||| || |||||||||||||||||||||||    
T  19009741 actttacttcagatcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatca 19009802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 42179845 - 42179924
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||| ||| |||||||| |||   |||||||||||| |||||| | ||||||||||||||||||||||    
T  42179845 caaggttgtcaaaatcagaaatttacttcgggttaaaagggaatagcataatcgaaactcgtaaaatcgcaatcaaaatc 42179924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 14074258 - 14074336
Alignment:
Q  201 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||| | |||||||||||||||| |||||||||||||||| |  | || ||||||| |||||||||||    
T  14074258 aaggttgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaattggaactcataaaatcacaatcaaaatc 14074336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 9954770 - 9954823
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcg 253  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  9954770 caaggttgtcaaaatcgggactttacttaaggtcgaaagggaatagcaaaatcg 9954823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 17869524 - 17869604
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    |||| ||||||||||||| ||| || ||||||||  ||||||| |||||||||| ||  ||||||||||||||||||||||    
T  17869524 caagattgtcaaaatcgggactctaattcaggtcaaaagggaagagcaaaatcgggacacgtaaaatcgcaatcaaaatca 17869604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 17055694 - 17055772
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||||  |||||||| |||||| ||||| || | ||||||| || ||||||||||||||||||||||    
T  17055694 caaggttgtcaaaatcgggtctttactt-aggtcgaaaggggattgtaaaatcgggactcgtaaaatcgcaatcaaaatc 17055772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 23529011 - 23528932
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||||||||||| |||||||   || |||| || || |||| || ||||||||||||||||||||||    
T  23529011 caaggttgtcaaaatcggaactttatttcaggttaaaaaggaacagtaagatcgggactcgtaaaatcgcaatcaaaatc 23528932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 17197306 - 17197374
Alignment:
Q  203 ggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaa 271  Q
    |||| |||||||||| ||||||||||| |||| |||||| |||||||||||  | ||||||||||||||    
T  17197306 ggttatcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcggaactcgtaaaatcgcaa 17197374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 13276032 - 13276110
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    ||||| ||||||||||||| ||||||||   ||||| ||| |||||||||||||  || ||||||||||||||||| |||||    
T  13276032 ccaagattgtcaaaatcgggactttact---ggtcgaaagagaatagcaaaatcaggactcgtaaaatcgcaatcagaatca 13276110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 18304592 - 18304645
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcg 253  Q
    |||||||||||||||||| |||| ||||||||||| |||| || ||||||||||    
T  18304592 caaggttgtcaaaatcgggacttcacttcaggtcgaaaggaaaaagcaaaatcg 18304645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 12002751 - 12002791
Alignment:
Q  240 gaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  12002751 gaatagcaaaatcgggactcgtaaaatcgcaatcaaaatca 12002791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 12513626 - 12513546
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    ||||||||||||||| || | ||| |||||||||  ||| ||| ||||||||||| | | |||||||||||| ||||||||    
T  12513626 caaggttgtcaaaattgggattttgcttcaggtcaaaagagaagagcaaaatcgacaattgtaaaatcgcaaccaaaatca 12513546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 41032546 - 41032618
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaa 271  Q
    |||||||||||||||| || | |||||||||||| | ||| ||| |||||||| || | ||||||||||||||    
T  41032546 ccaaggttgtcaaaatagggattttacttcaggttgaaagagaagagcaaaattgataatcgtaaaatcgcaa 41032618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 16434828 - 16434785
Alignment:
Q  236 aagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    ||||||||||||||||||| | ||||||||| ||||||||||||    
T  16434828 aagggaatagcaaaatcgaaaatcgtaaaattgcaatcaaaatc 16434785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 27502129 - 27502208
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||| | ||||||||| |||   |  ||||||||||| ||||| || |||||| ||||||||||||    
T  27502129 caaggttgtcaaaatcgggaatttacttcaagtcaacatagaatagcaaaaccgagactcataaaattgcaatcaaaatc 27502208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 30619296 - 30619232
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaa 264  Q
    ||||||||||||||||||| | ||| |||||||||| ||| ||| ||||||||||| | |||||||    
T  30619296 ccaaggttgtcaaaatcgggatttt-cttcaggtcgaaagagaagagcaaaatcgacaatcgtaaa 30619232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 8797 - 8718
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 278  Q
    |||||||| |||||||||| |||||||||||||||| ||||||||| ||||||||  | |||||||||||||||||||||    
T  8797 ccaaggttctcaaaatcgggactttacttcaggtcgaaagggaataacaaaatcggaactcgtaaaatcgcaatcaaaat 8718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 56199 - 56278
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||  |||||||||||||||| |||||||||||||||||||||    |||||||||||||||||||    
T  56199 caaggttgtcaaaatcgagactttacttcaggtcgaaagggaatagcaaaatcgagacatctaaaatcgcaatcaaaatc 56278  T

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Target: scaffold0017 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 274
Target Start/End: Original strand, 38300 - 38375
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatca 274  Q
    ||||||||||||||||||| ||||||||||| |||| |||| ||||||||||||| || ||||||||| |||||||    
T  38300 ccaaggttgtcaaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgggactcgtaaaattgcaatca 38375  T

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Target: scaffold0079 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 14699 - 14779
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||| ||||||||||  |||||||||| |||| || ||| ||||||||||| || ||||||||||||||||||||||    
T  14699 ccaaggttatcaaaatcggggctttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatc 14779  T

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Target: scaffold2084 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 184 - 104
Alignment:
Q  199 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||| |||||||||| ||||||||||| |||  |||||| ||||||||||| || ||||||||| | ||| ||||||    
T  184 ccaaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgggactcgtaaaattgtaattaaaatc 104  T

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Target: scaffold0182 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 24733 - 24661
Alignment:
Q  208 tcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 280  Q
    ||||||||  |||||||||||| |||| |||||| ||||||||||| || ||||||||| | |||||||||||    
T  24733 tcaaaatcaaaactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaattgtaatcaaaatca 24661  T

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Target: scaffold0061 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 76083 - 76155
Alignment:
Q  200 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaat 272  Q
    |||||||||||||||||| ||||||||||  |||| |||| |||||||||  || || ||||||||| |||||    
T  76083 caaggttgtcaaaatcgggactttacttccagtcgaaaggaaatagcaaacccgggactcgtaaaattgcaat 76155  T

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Target: scaffold0417 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 7268 - 7308
Alignment:
Q  239 ggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 279  Q
    |||||||||||||||||| | ||||||||| ||||||||||    
T  7268 ggaatagcaaaatcgagacttgtaaaatcgtaatcaaaatc 7308  T

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