View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11279_low_39 (Length: 251)
Name: NF11279_low_39
Description: NF11279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11279_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 45932598 - 45932838
Alignment:
| Q |
1 |
aagtttgaaatgtagacggaaaaatcattttgaagcaatgcctttatgagtatataagtgtagctcaattaaaacgtttactcaaaattagaagaaaaca |
100 |
Q |
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| T |
45932598 |
aagtttgaaatgtagacggaaaaatcattttgaagcaatgcctttatgagtatataagtgtagctcaattaaaacgtttactcaaaattagaagaaaaca |
45932697 |
T |
|
| Q |
101 |
tctcgtgaggggaagtcatgaaggtgaaggtgagatgagacaaaccctatgnnnnnnnncatacatagaatagaaggtaccggaagagtcttaactcttt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |
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| T |
45932698 |
tctcgtgaggggaagtcatgaaggtgaaggtgagatgagacaaaccctatgttttttttcatacatagaatagaaggtaccggaagagtctcaactcttt |
45932797 |
T |
|
| Q |
201 |
ttaacagaagagtcttaactcttaactgcacccaccctatg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
45932798 |
ttaacagaagagtcttaactcttaactgcacccaccctatg |
45932838 |
T |
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