View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1127_low_10 (Length: 324)
Name: NF1127_low_10
Description: NF1127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1127_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 97 - 241
Target Start/End: Original strand, 3001709 - 3001853
Alignment:
| Q |
97 |
agtattaactagtttatcatctatgaactcatcctggtatctggttgtaagaaaacacaagctaacatttgatgtgcacgttcaagttgggtacaaattc |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3001709 |
agtattaactagtttatcatctatgaactcatcctggtatctggttgtaagaaaacacaagctaacatttgatgtgcacgttcaagttgggtacaaattc |
3001808 |
T |
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| Q |
197 |
cagcttcattaattgacggtcaaatattaatgctctctagtctct |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3001809 |
cagcttcattaattgacggtcaaatattaatgctctctagtctct |
3001853 |
T |
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