View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1127_low_13 (Length: 265)
Name: NF1127_low_13
Description: NF1127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1127_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 3001709 - 3001846
Alignment:
| Q |
97 |
agtattaactagtttatcatctatgaactcatcctggtatctggttgtaagaaaacacaagctaacatttgatgtgcacgttcaagttgggtacaaattc |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3001709 |
agtattaactagtttatcatctatgaactcatcctggtatctggttgtaagaaaacacaagctaacatttgatgtgcacgttcaagttgggtacaaattc |
3001808 |
T |
|
| Q |
197 |
cagcttcattaattgacggtcaaatattaatgctctct |
234 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
3001809 |
cagcttcattaattgacggtcaaatattaatgctctct |
3001846 |
T |
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