View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1127_low_20 (Length: 205)

Name: NF1127_low_20
Description: NF1127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1127_low_20
NF1127_low_20
[»] chr7 (43 HSPs)
chr7 (1-87)||(9623275-9623361)
chr7 (1-86)||(9125026-9125112)
chr7 (2-86)||(2941750-2941835)
chr7 (1-86)||(2465800-2465886)
chr7 (1-86)||(6719067-6719153)
chr7 (1-86)||(13125129-13125215)
chr7 (1-86)||(42515611-42515697)
chr7 (1-86)||(2193323-2193409)
chr7 (1-86)||(2465991-2466077)
chr7 (1-86)||(28495921-28496007)
chr7 (1-86)||(34405584-34405670)
chr7 (1-86)||(36422319-36422405)
chr7 (1-86)||(42515159-42515245)
chr7 (1-87)||(35474113-35474200)
chr7 (1-86)||(2189211-2189297)
chr7 (1-82)||(11517386-11517468)
chr7 (1-86)||(46425808-46425894)
chr7 (1-87)||(18833353-18833440)
chr7 (1-86)||(2611645-2611731)
chr7 (1-86)||(6747591-6747677)
chr7 (1-94)||(26421290-26421384)
chr7 (21-86)||(28495601-28495667)
chr7 (24-86)||(13122498-13122561)
chr7 (1-87)||(25182428-25182515)
chr7 (1-86)||(679884-679969)
chr7 (2-87)||(26421752-26421838)
chr7 (5-86)||(31406577-31406659)
chr7 (30-86)||(7646471-7646528)
chr7 (87-126)||(9625111-9625150)
chr7 (1-87)||(29357448-29357535)
chr7 (1-83)||(35527117-35527200)
chr7 (1-86)||(5406581-5406667)
chr7 (6-87)||(7461343-7461424)
chr7 (1-86)||(16192386-16192472)
chr7 (1-87)||(22529227-22529314)
chr7 (47-86)||(43776283-43776322)
chr7 (33-86)||(7646514-7646568)
chr7 (1-69)||(31743834-31743903)
chr7 (4-48)||(29039052-29039096)
chr7 (4-87)||(36015403-36015487)
chr7 (1-44)||(43233480-43233523)
chr7 (21-81)||(20966138-20966199)
chr7 (1-87)||(33316795-33316877)
[»] chr4 (52 HSPs)
chr4 (1-87)||(13613884-13613970)
chr4 (1-87)||(49998703-49998790)
chr4 (1-86)||(12691986-12692072)
chr4 (1-86)||(44471312-44471398)
chr4 (1-87)||(50398979-50399066)
chr4 (1-86)||(50398525-50398611)
chr4 (1-86)||(50814812-50814898)
chr4 (1-86)||(35871695-35871780)
chr4 (1-79)||(4127431-4127510)
chr4 (1-87)||(21220317-21220404)
chr4 (1-86)||(24628964-24629050)
chr4 (1-86)||(44470862-44470947)
chr4 (1-86)||(1645736-1645822)
chr4 (1-82)||(4185782-4185864)
chr4 (1-82)||(7678613-7678695)
chr4 (1-86)||(23942776-23942862)
chr4 (1-86)||(24629420-24629506)
chr4 (1-86)||(51331268-51331354)
chr4 (1-86)||(27026570-27026655)
chr4 (12-86)||(15306078-15306153)
chr4 (1-86)||(1464214-1464300)
chr4 (1-86)||(4127876-4127962)
chr4 (1-86)||(23350270-23350356)
chr4 (1-82)||(27029344-27029426)
chr4 (1-87)||(29628654-29628740)
chr4 (1-76)||(14572148-14572223)
chr4 (1-83)||(23091501-23091584)
chr4 (12-86)||(23943229-23943304)
chr4 (1-86)||(14571708-14571794)
chr4 (1-82)||(53996106-53996188)
chr4 (2-86)||(21067350-21067435)
chr4 (1-86)||(3169273-3169359)
chr4 (3-86)||(33764929-33765013)
chr4 (1-81)||(52048659-52048739)
chr4 (87-126)||(13612096-13612135)
chr4 (1-91)||(17628578-17628669)
chr4 (1-82)||(9423849-9423931)
chr4 (1-86)||(27578444-27578530)
chr4 (1-86)||(31817839-31817925)
chr4 (23-87)||(14351884-14351949)
chr4 (7-82)||(17029403-17029479)
chr4 (1-48)||(8467826-8467873)
chr4 (1-72)||(24271552-24271623)
chr4 (1-48)||(41869985-41870032)
chr4 (1-86)||(20306151-20306234)
chr4 (1-86)||(21067801-21067884)
chr4 (1-87)||(42838690-42838780)
chr4 (1-48)||(23976245-23976292)
chr4 (1-87)||(31817384-31817471)
chr4 (49-86)||(11828472-11828509)
chr4 (4-48)||(43928989-43929033)
chr4 (1-37)||(53391954-53391990)
[»] scaffold0499 (1 HSPs)
scaffold0499 (1-86)||(2044-2130)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-86)||(107456-107542)
[»] chr8 (38 HSPs)
chr8 (1-86)||(10844950-10845036)
chr8 (1-86)||(22026446-22026532)
chr8 (1-86)||(12827247-12827333)
chr8 (1-86)||(22548542-22548628)
chr8 (1-86)||(22548988-22549074)
chr8 (1-86)||(25144839-25144925)
chr8 (1-86)||(27925966-27926052)
chr8 (1-87)||(41659097-41659184)
chr8 (1-86)||(10844608-10844694)
chr8 (1-86)||(2044125-2044211)
chr8 (1-86)||(6464903-6464989)
chr8 (1-86)||(17103148-17103234)
chr8 (1-86)||(25147603-25147689)
chr8 (1-86)||(25148034-25148120)
chr8 (1-86)||(27022331-27022417)
chr8 (1-86)||(12100758-12100844)
chr8 (1-86)||(28453405-28453491)
chr8 (1-86)||(34308472-34308558)
chr8 (2-86)||(8080335-8080420)
chr8 (4-82)||(21316106-21316185)
chr8 (1-78)||(22840530-22840608)
chr8 (2-87)||(27819238-27819324)
chr8 (1-86)||(32292464-32292550)
chr8 (1-86)||(41913037-41913123)
chr8 (1-95)||(28375038-28375133)
chr8 (12-82)||(31283648-31283719)
chr8 (24-86)||(34308928-34308991)
chr8 (1-86)||(33852251-33852337)
chr8 (1-82)||(30527479-30527561)
chr8 (23-83)||(25307855-25307914)
chr8 (1-87)||(1297074-1297161)
chr8 (1-87)||(15567548-15567635)
chr8 (7-81)||(15819014-15819088)
chr8 (1-44)||(22705239-22705282)
chr8 (1-48)||(27021911-27021958)
chr8 (1-86)||(3745168-3745254)
chr8 (1-83)||(3744705-3744788)
chr8 (1-48)||(30334940-30334987)
[»] chr3 (40 HSPs)
chr3 (1-86)||(28561813-28561899)
chr3 (1-86)||(31284269-31284355)
chr3 (1-86)||(13150547-13150633)
chr3 (1-86)||(11180027-11180113)
chr3 (1-82)||(39653231-39653313)
chr3 (1-86)||(50347813-50347899)
chr3 (1-87)||(25239069-25239156)
chr3 (1-87)||(39641004-39641091)
chr3 (1-86)||(2911162-2911248)
chr3 (1-86)||(4067353-4067439)
chr3 (1-86)||(8067347-8067433)
chr3 (1-86)||(13150092-13150178)
chr3 (1-86)||(14814016-14814102)
chr3 (1-86)||(14820221-14820307)
chr3 (1-86)||(16811448-16811534)
chr3 (1-86)||(20885110-20885196)
chr3 (1-86)||(27187323-27187409)
chr3 (1-86)||(32227567-32227653)
chr3 (1-86)||(32386727-32386813)
chr3 (1-86)||(25238677-25238763)
chr3 (2-87)||(25802540-25802626)
chr3 (1-86)||(32227214-32227300)
chr3 (1-86)||(41472367-41472453)
chr3 (1-86)||(25230241-25230327)
chr3 (1-86)||(25230698-25230784)
chr3 (1-86)||(25237828-25237914)
chr3 (1-86)||(25238285-25238371)
chr3 (1-86)||(25248178-25248264)
chr3 (1-86)||(30529754-30529840)
chr3 (1-78)||(32796936-32797014)
chr3 (1-86)||(37045102-37045188)
chr3 (1-83)||(7493948-7494031)
chr3 (1-82)||(16810992-16811074)
chr3 (1-86)||(29224391-29224477)
chr3 (1-86)||(41474064-41474150)
chr3 (1-83)||(7477258-7477341)
chr3 (1-81)||(26309987-26310068)
chr3 (3-86)||(25802997-25803081)
chr3 (2-44)||(3890046-3890088)
chr3 (1-82)||(31103955-31104039)
[»] chr2 (32 HSPs)
chr2 (1-86)||(30966757-30966843)
chr2 (1-86)||(1912592-1912677)
chr2 (1-86)||(8256593-8256679)
chr2 (1-86)||(29804749-29804835)
chr2 (1-86)||(41754356-41754442)
chr2 (7-86)||(11388260-11388340)
chr2 (1-87)||(33175025-33175112)
chr2 (1-83)||(33771068-33771151)
chr2 (1-86)||(5399810-5399896)
chr2 (1-86)||(16379004-16379090)
chr2 (1-86)||(24818393-24818479)
chr2 (1-86)||(25434049-25434135)
chr2 (1-86)||(30966301-30966387)
chr2 (1-86)||(33174570-33174656)
chr2 (1-87)||(16379460-16379547)
chr2 (1-83)||(18098874-18098957)
chr2 (1-86)||(25337990-25338076)
chr2 (7-86)||(11394607-11394686)
chr2 (1-87)||(1707108-1707195)
chr2 (1-86)||(38898905-38898991)
chr2 (7-86)||(29259613-29259693)
chr2 (1-87)||(83084-83171)
chr2 (1-86)||(30963713-30963799)
chr2 (1-83)||(8073959-8074042)
chr2 (1-86)||(15619965-15620051)
chr2 (1-80)||(13191041-13191121)
chr2 (1-48)||(1953222-1953269)
chr2 (1-86)||(20502090-20502175)
chr2 (1-87)||(27882918-27883005)
chr2 (1-44)||(30963299-30963342)
chr2 (1-86)||(30961876-30961962)
chr2 (46-83)||(32377712-32377749)
[»] chr1 (38 HSPs)
chr1 (1-86)||(20054073-20054159)
chr1 (1-86)||(20054529-20054615)
chr1 (1-86)||(20054985-20055071)
chr1 (1-86)||(20055441-20055527)
chr1 (1-86)||(20055897-20055983)
chr1 (1-86)||(20056353-20056439)
chr1 (1-86)||(20057256-20057342)
chr1 (1-86)||(20057712-20057798)
chr1 (1-86)||(20845654-20845740)
chr1 (5-87)||(20056808-20056891)
chr1 (4-86)||(43057058-43057141)
chr1 (1-87)||(50002699-50002786)
chr1 (2-87)||(2634992-2635078)
chr1 (1-82)||(20060337-20060419)
chr1 (1-82)||(20061188-20061270)
chr1 (1-86)||(38340973-38341059)
chr1 (1-86)||(52250273-52250359)
chr1 (1-86)||(16451926-16452012)
chr1 (1-86)||(16461079-16461165)
chr1 (1-86)||(43057516-43057602)
chr1 (1-79)||(50002285-50002364)
chr1 (1-86)||(35759601-35759687)
chr1 (1-86)||(51372867-51372953)
chr1 (3-83)||(30872946-30873027)
chr1 (1-87)||(12883591-12883678)
chr1 (1-86)||(35760907-35760993)
chr1 (1-86)||(46693728-46693814)
chr1 (1-81)||(2328382-2328463)
chr1 (1-83)||(12728058-12728142)
chr1 (1-86)||(50003068-50003154)
chr1 (1-85)||(31822657-31822742)
chr1 (1-87)||(16907301-16907388)
chr1 (32-86)||(52250641-52250696)
chr1 (32-86)||(52250978-52251033)
chr1 (1-86)||(23180797-23180883)
chr1 (1-82)||(16440576-16440658)
chr1 (1-85)||(7548158-7548243)
chr1 (3-66)||(31823097-31823161)
[»] scaffold0047 (2 HSPs)
scaffold0047 (1-86)||(18128-18213)
scaffold0047 (1-86)||(17591-17677)
[»] chr5 (33 HSPs)
chr5 (4-86)||(2474475-2474558)
chr5 (1-87)||(3886593-3886680)
chr5 (1-86)||(2193883-2193969)
chr5 (1-86)||(2474026-2474112)
chr5 (1-86)||(8642027-8642113)
chr5 (1-86)||(17445448-17445534)
chr5 (1-86)||(42788639-42788725)
chr5 (1-83)||(189135-189218)
chr5 (1-91)||(22556603-22556694)
chr5 (4-86)||(34371682-34371765)
chr5 (4-86)||(34372138-34372221)
chr5 (1-86)||(34867857-34867943)
chr5 (1-91)||(22557036-22557127)
chr5 (1-86)||(1821973-1822059)
chr5 (1-86)||(10927396-10927482)
chr5 (1-82)||(21886143-21886225)
chr5 (1-86)||(39147006-39147092)
chr5 (1-82)||(20039472-20039553)
chr5 (1-86)||(3887050-3887136)
chr5 (1-86)||(10926939-10927025)
chr5 (1-86)||(27646828-27646914)
chr5 (7-83)||(18304504-18304581)
chr5 (1-86)||(8391315-8391400)
chr5 (21-87)||(29680099-29680166)
chr5 (1-84)||(4673466-4673550)
chr5 (24-86)||(11757274-11757337)
chr5 (1-86)||(15513005-15513090)
chr5 (1-74)||(18750201-18750275)
chr5 (1-82)||(20858538-20858620)
chr5 (1-86)||(30684549-30684635)
chr5 (1-86)||(30719798-30719884)
chr5 (1-80)||(4657992-4658072)
chr5 (1-86)||(24182239-24182324)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-86)||(1287-1373)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-86)||(105787-105873)
[»] chr6 (38 HSPs)
chr6 (1-86)||(13492399-13492485)
chr6 (1-86)||(13492856-13492942)
chr6 (1-80)||(7911945-7912025)
chr6 (1-87)||(15929649-15929736)
chr6 (1-86)||(2681209-2681295)
chr6 (1-86)||(6330905-6330991)
chr6 (1-86)||(13191506-13191592)
chr6 (9-86)||(16520043-16520121)
chr6 (1-86)||(17027524-17027610)
chr6 (1-86)||(20850388-20850474)
chr6 (1-86)||(20896681-20896767)
chr6 (9-86)||(9352137-9352215)
chr6 (1-81)||(3652553-3652634)
chr6 (10-86)||(17850994-17851071)
chr6 (1-86)||(7912377-7912463)
chr6 (1-86)||(11062352-11062438)
chr6 (1-86)||(20126175-20126261)
chr6 (1-82)||(20735762-20735844)
chr6 (1-86)||(17731102-17731192)
chr6 (1-73)||(27334228-27334301)
chr6 (1-73)||(27394968-27395041)
chr6 (1-86)||(17851441-17851527)
chr6 (1-82)||(23986314-23986396)
chr6 (1-86)||(2890832-2890918)
chr6 (1-82)||(9440306-9440388)
chr6 (1-82)||(28583030-28583112)
chr6 (1-85)||(23776508-23776592)
chr6 (1-82)||(2720560-2720643)
chr6 (1-86)||(21311582-21311668)
chr6 (1-86)||(21312038-21312124)
chr6 (33-86)||(28780209-28780263)
chr6 (1-74)||(17205406-17205479)
chr6 (1-72)||(15929266-15929338)
chr6 (4-81)||(1991623-1991701)
chr6 (1-82)||(14771716-14771798)
chr6 (1-83)||(28065831-28065917)
chr6 (1-67)||(31821704-31821771)
chr6 (1-87)||(33774994-33775083)
[»] scaffold0333 (2 HSPs)
scaffold0333 (4-82)||(4631-4710)
scaffold0333 (4-86)||(5091-5174)
[»] scaffold0322 (1 HSPs)
scaffold0322 (1-86)||(19033-19119)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-86)||(2809-2895)
[»] scaffold0022 (4 HSPs)
scaffold0022 (1-86)||(162671-162757)
scaffold0022 (30-86)||(163167-163224)
scaffold0022 (1-80)||(69814-69894)
scaffold0022 (33-86)||(163127-163181)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-86)||(10367-10453)
[»] scaffold0389 (1 HSPs)
scaffold0389 (21-86)||(13526-13592)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-86)||(2203-2289)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-86)||(154824-154910)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-76)||(245153-245228)
scaffold0005 (1-86)||(245582-245668)
[»] scaffold0557 (1 HSPs)
scaffold0557 (1-83)||(2172-2255)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-48)||(142306-142353)
[»] scaffold0277 (1 HSPs)
scaffold0277 (33-86)||(14695-14749)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-46)||(23740-23785)
[»] scaffold0664 (1 HSPs)
scaffold0664 (1-68)||(3993-4061)
[»] scaffold0391 (1 HSPs)
scaffold0391 (1-83)||(14808-14891)
[»] scaffold0036 (1 HSPs)
scaffold0036 (7-74)||(26143-26211)


Alignment Details
Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 9623275 - 9623361
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9623275 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagttcattctataagaactccacagttaagcgtgt 9623361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9125026 - 9125112
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  9125026 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 9125112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 2941835 - 2941750
Alignment:
Q  2 ataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  2941835 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 2941750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2465800 - 2465886
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  2465800 tataagagttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 2465886  T

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Target: chr7; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 6719153 - 6719067
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  6719153 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccagagttaagcgtg 6719067  T

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Target: chr7; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13125215 - 13125129
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  13125215 tataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 13125129  T

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Target: chr7; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 42515611 - 42515697
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||| |||||| ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  42515611 tataagaagtgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 42515697  T

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Target: chr7; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2193323 - 2193409
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttct-ttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||||    
T  2193323 tataagaattgtttggtactacctatatcaacaagatgcatcttctattcggtagctcatttcataggaactccacagttaagcgtg 2193409  T

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Target: chr7; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2465991 - 2466077
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||| ||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  2465991 tataagagttgtttggtactacctatatcaacaagttgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 2466077  T

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Target: chr7; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 28495921 - 28496007
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||| |||| | ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  28495921 tataagaactgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 28496007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34405670 - 34405584
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| ||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  34405670 tataagaattgttgggtactacctatatcaacaggatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 34405584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36422319 - 36422405
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  36422319 tataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 36422405  T

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Target: chr7; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 42515159 - 42515245
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  42515159 tataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataagaactccacagttaagcgtg 42515245  T

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Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 35474200 - 35474113
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||  ||| || |||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  35474200 tataagaattgtttagtactacttatatcaacaagatgcatcttctttttggtagctcattccataagaactccacagttaagcgtgt 35474113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2189211 - 2189297
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||||||  || ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||||||||||||||||    
T  2189211 tataagaattgtttggcactacctatatcaacaagatgcatcttcttttcgatagctcatttcataagaactccacagttaagcgtg 2189297  T

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Target: chr7; HSP #16
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 11517468 - 11517386
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| | |||||||||||||||| ||||||||||| ||||||||    
T  11517468 tataagaattgtttggtactacctatatcaacaagatgcatctacttttcggtagctcattccataagaactccgcagttaag 11517386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 46425808 - 46425894
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||| |||||||| || |||| ||||||||||||||||||||||||    
T  46425808 tataagaattgtttggtattacctatatcaacaagatgcatcttcttttcggtatcttattccataagaactccacagttaagcgtg 46425894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 18833353 - 18833440
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||| |||||||||  ||| ||||||||||||||||||||||||| ||||||||||| |||  |||||||||||||||||||||||||    
T  18833353 tatatgaattgtttagtactacctatatcaacaagatgcatcttcttttcggtagctaattacataagaactccacagttaagcgtgt 18833440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2611731 - 2611645
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| | ||||| ||||||||||||||||| ||| |||||| |||||||||||||||||| |||||||||||    
T  2611731 tataagaattgtttggtactatctataacaacaagatgcatcttctttttggtagcccattctataagaactccatagttaagcgtg 2611645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 6747677 - 6747591
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||  |||| |||| |||||||||||||||||||    
T  6747677 tataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcctattccataaaaactccacagttaagcgtg 6747591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 26421384 - 26421290
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcat-cttctttcggtagctcattctataagaactccacagttaagcgtgtctgaatt 94  Q
    ||||||||||| ||||||| |||||||||||||||||||||  || |||||||||  ||||| ||||||||||||||||||| ||||| ||||||    
T  26421384 tataagaattgcttgatactacctatatcaacaagatgcatatttttttcggtagtccattccataagaactccacagttaaacgtgtttgaatt 26421290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 28495667 - 28495601
Alignment:
Q  21 acctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  28495667 acctatatcaacaagatgcatcttcttttaggtagctcattccataagaactccacagttaagcgtg 28495601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 13122561 - 13122498
Alignment:
Q  24 tatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  13122561 tatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 13122498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 25182428 - 25182515
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatctt-ctttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||  |||||||| ||||||| ||||||||| |||||||||| ||||    
T  25182428 tataagaattgtttggtactacctatatcaacaagatacatcttattttcggtaactcattccataagaacttcacagttaagtgtgt 25182515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 679884 - 679969
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| ||||||||||||||||||||| ||||||  |||||| ||||| ||||||||||||||||||||||||    
T  679884 tataagaattgttgg-tactacctatatcaacaagatgcatattctttttggtagcccattccataagaactccacagttaagcgtg 679969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 26421838 - 26421752
Alignment:
Q  2 ataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||||||||||| | |||  |||||| |||||||||| ||||||||| ||||||| ||||| ||||||||| |||||||||||||||    
T  26421838 ataagaattgttaggtactccctataccaacaagatgaatcttcttttcggtagcccattccataagaactacacagttaagcgtgt 26421752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 31406659 - 31406577
Alignment:
Q  5 agaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||| |   ||||||||||||||||||||||||| |||||||||| | ||  ||||||||||||||||||||||||    
T  31406659 agaattgtttggtgttacctatatcaacaagatgcatcttcttttcggtagcccgtttcataagaactccacagttaagcgtg 31406577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 7646528 - 7646471
Alignment:
Q  30 aacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  7646528 aacaagatgcatcttcttttcggtagctcattccataagaacttcacagttaagcgtg 7646471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 87 - 126
Target Start/End: Original strand, 9625111 - 9625150
Alignment:
Q  87 tctgaattctactgtgatttcttcttgaccaaagtataat 126  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9625111 tctgaattctactgtgatttcttcttgaccaaagtataat 9625150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 29357535 - 29357448
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| ||||| |||| | ||  ||||||||| ||||||||| |||||    
T  29357535 tataagaattgtttggtactaactatatcaacaagatgcatcttcttttcgatagcccgtttcataagaactacacagttaaccgtgt 29357448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 35527200 - 35527117
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 83  Q
    ||||||||||||||| | | ||||||||||||||||||||| ||| |||| ||||  ||||| ||| |||||||||||||||||    
T  35527200 tataagaattgtttggtgctacctatatcaacaagatgcatattcttttcagtagtccattccataggaactccacagttaagc 35527117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 5406667 - 5406581
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatctt-ctttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||  ||| ||| || ||  | ||||||||||||||||||||||||    
T  5406667 tataagaattgtttggtattacctatatcaacaagatgcatcttatttttggttgcccaaaccataagaactccacagttaagcgtg 5406581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 7461424 - 7461343
Alignment:
Q  6 gaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||||||||||||| | |||||| |||||||| ||||||| ||| ||||| |||||| |||||||||| ||||||||||||||    
T  7461424 gaattgtttgatactaactatataaacaagatacatcttctttttggtagttcattc-ataagaactctacagttaagcgtgt 7461343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 16192386 - 16192472
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||  ||||| ||||||||||||||||||| ||| |||||| ||||| |||||||||  ||||| |||||||    
T  16192386 tataagaattgtttggtattacctacatcaacaagatgcatcttcgttttggtagcccattccataagaactatacagtgaagcgtg 16192472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 22529314 - 22529227
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||||||| |||||| ||| | |||||| |||||||||||||||| |||| ||| ||||||  | ||||||| |||||||||||||||    
T  22529314 tataagaaatgtttggtactatctatataaacaagatgcatcttcttttcagtaactcattacaaaagaacttcacagttaagcgtgt 22529227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 43776322 - 43776283
Alignment:
Q  47 ttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  43776322 ttcggtagctcattccataagaactccacagttaagcgtg 43776283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 7646514 - 7646568
Alignment:
Q  33 aagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  7646514 aagatgcatcttgttttcggtaactcattccataagaactccacagttaagcgtg 7646568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31743903 - 31743834
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaa 69  Q
    ||||||||| ||||| | | | ||||||||||||||||||||||| |||||||||| ||||| |||||||    
T  31743903 tataagaatggtttggtgctatctatatcaacaagatgcatcttcttttcggtagcccattccataagaa 31743834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 29039096 - 29039052
Alignment:
Q  4 aagaattgtttgataccacctatatcaacaagatgcatcttcttt 48  Q
    |||||||||||| ||| |||||||||||||| |||||||||||||    
T  29039096 aagaattgtttggtactacctatatcaacaacatgcatcttcttt 29039052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 36015487 - 36015403
Alignment:
Q  4 aagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||||||||||| ||| || |||||||||||||||| ||||| |||   |||| ||||| ||||||||| ||||||||| |||||    
T  36015487 aagaattgtttggtactacatatatcaacaagatgcctcttcttttaaatagcccattccataagaacttcacagttaaacgtgt 36015403  T

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Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43233480 - 43233523
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatctt 44  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||    
T  43233480 tataagaattgtttggtactatctatatcaacaagatgcatctt 43233523  T

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Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 20966138 - 20966199
Alignment:
Q  21 acctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaa 81  Q
    ||||||| |||||||||| || || ||| ||||||||||||| ||||||||| |||||||||    
T  20966138 acctataccaacaagatgtatattattttcggtagctcattccataagaacttcacagttaa 20966199  T

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Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 33316795 - 33316877
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||||||||||||||| |  || |||||||||||||||  |||  |||||||||| ||  |||||||||||||||| |||| |||||    
T  33316795 tataagaattgtttgacaatacttatatcaacaagatg--tct--tttcggtagcccaaactataagaactccacaattaaacgtgt 33316877  T

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Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 13613970 - 13613884
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13613970 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagttcattctataagaactccacagttaagcgtgt 13613884  T

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Target: chr4; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 49998703 - 49998790
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  49998703 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgt 49998790  T

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Target: chr4; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12692072 - 12691986
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  12692072 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 12691986  T

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Target: chr4; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 44471398 - 44471312
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  44471398 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 44471312  T

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Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 50399066 - 50398979
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  50399066 tataagaattgtttggtactacctatatcaacacgatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgt 50398979  T

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Target: chr4; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 50398611 - 50398525
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  50398611 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccatagttaagcgtg 50398525  T

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Target: chr4; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 50814898 - 50814812
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| | |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  50814898 tataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 50814812  T

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Target: chr4; HSP #8
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35871695 - 35871780
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||| |||||||||| ||||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||||||    
T  35871695 tatatgaattgtttggtaccacctatatcaacaagatgcatttcttttcggtagctcattccataagaactccacagttaagcgtg 35871780  T

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Target: chr4; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 4127510 - 4127431
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagtt 79  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  4127510 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtt 4127431  T

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Target: chr4; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21220404 - 21220317
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||| |||||||||||||||    
T  21220404 tataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtaactcattctataagaactacacagttaagcgtgt 21220317  T

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Target: chr4; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24629050 - 24628964
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||    
T  24629050 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcgttccataagaactccacagttaagcgtg 24628964  T

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Target: chr4; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 44470947 - 44470862
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| |  ||| ||||||| ||||||||||||||||||||||||    
T  44470947 tataagaattgtttggtactacctatatcaacaagatgcatcttctgttcgtaactcattccataagaactccacagttaagcgtg 44470862  T

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Target: chr4; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1645822 - 1645736
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||    
T  1645822 tataagaattgtttggtattacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtg 1645736  T

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Target: chr4; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 4185782 - 4185864
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| ||| |||||||||||||| |||||||| |||||||||    
T  4185782 tataagaattgtttgataccacatataccaacaagatgcatcttctttttggtagctcattctacaagaactctacagttaag 4185864  T

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Target: chr4; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7678695 - 7678613
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  7678695 tataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataagaactccacagttaag 7678613  T

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Target: chr4; HSP #16
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 23942862 - 23942776
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||  ||||| ||||| ||||||||||||||||||||||||    
T  23942862 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataagaactccacagttaagcgtg 23942776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24629506 - 24629420
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||| ||| ||||||| ||||||||||||||||    
T  24629506 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtacctcgttccataagaattccacagttaagcgtg 24629420  T

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Target: chr4; HSP #18
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 51331354 - 51331268
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| | ||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  51331354 tataagaattgtttggtactatctatatcaacaagatacatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 51331268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 27026570 - 27026655
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||| ||||||||| |  |||||||||||    
T  27026570 tataagaattgtttgatactacctatatcaacaagatgcatctttttttggtagcccattccataagaactacgtagttaagcgtg 27026655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 15306153 - 15306078
Alignment:
Q  12 tttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||| ||| |||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  15306153 tttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 15306078  T

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Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1464214 - 1464300
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||| || ||||||    
T  1464214 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcacaatttagcgtg 1464300  T

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Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 4127962 - 4127876
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||  |||| ||||||||| || |||||||||||    
T  4127962 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagccaattccataagaacttcagagttaagcgtg 4127876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 23350356 - 23350270
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| |||  |||||||||||||||||||||||| |||||||||||| ||| ||||||||| || |||||||||||    
T  23350356 tataagaattgtttggtacttcctatatcaacaagatgcatcttcttttcggtagctccttccataagaacttcatagttaagcgtg 23350270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 27029344 - 27029426
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    |||||||||| |||| ||| || |||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  27029344 tataagaattatttggtactacttatatcaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaag 27029426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 29628740 - 29628654
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||| ||| ||||||||||||||||||  ||||  || |||||| ||||| |||||||||||||||||||||||||    
T  29628740 tataagaattgtttggtactacctatatcaacaagatgtgtctttgtttggtagcccattccataagaactccacagttaagcgtgt 29628654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 14572223 - 14572148
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccaca 76  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||  |  | ||||||||||||||    
T  14572223 tataagaattgtttggtactacctatatcaacaagatgcatcttctttcggtagcctaaaccataagaactccaca 14572148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23091584 - 23091501
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagc 83  Q
    ||||| ||||||||| ||| || ||||| |||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  23091584 tataaaaattgtttggtactacatatattaacaagatgcatcttctttctggtagcttattctataaaaactccacagttaagc 23091501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 23943304 - 23943229
Alignment:
Q  12 tttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||| ||| ||||||||||||||||||||||||||||  |||||| ||||| ||||||||||||||||||||||||    
T  23943304 tttggtactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaagcgtg 23943229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 14571794 - 14571708
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||| | |||||  |  | ||||||||||||||||||||||||    
T  14571794 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagcctaaaccataagaactccacagttaagcgtg 14571708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 53996188 - 53996106
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    ||||| ||||||||| ||| ||||||||||||||||| ||||||| ||| |||| ||||||| ||||||||||||||||||||    
T  53996188 tataaaaattgtttggtactacctatatcaacaagattcatcttctttttggtatctcattccataagaactccacagttaag 53996106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 21067350 - 21067435
Alignment:
Q  2 ataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||| |||| |||| ||| || ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||| |||||||||    
T  21067350 ataataattatttggtactacatatatcaacaagatgcatcttctttccggtagctcattctaaaagtactccacaattaagcgtg 21067435  T

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Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3169273 - 3169359
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||| ||| |||| | || || |||||||||||||| |||||||||    
T  3169273 tataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtaacccaatccataagaactccacacttaagcgtg 3169359  T

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Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 33764929 - 33765013
Alignment:
Q  3 taagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | | ||||||| ||||||||||||||||| |||  |||||||||| |||||||||| |||| |||||||||    
T  33764929 taagaattgtttggtgctacctataccaacaagatgcatcttcttttttgtagctcattttataagaacttcacacttaagcgtg 33765013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 52048739 - 52048659
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaa 81  Q
    ||||||||||||||||||| || ||||  |||||||||||||||| ||  |||  |||||| |||||||||||||||||||    
T  52048739 tataagaattgtttgatactacgtatactaacaagatgcatcttcattttgtaagtcattccataagaactccacagttaa 52048659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 87 - 126
Target Start/End: Complemental strand, 13612135 - 13612096
Alignment:
Q  87 tctgaattctactgtgatttcttcttgaccaaagtataat 126  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13612135 tctgaattctactgtgatttcttcttgaccaaagtataat 13612096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 17628578 - 17628669
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgtctga 91  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||||| ||||| |||| ||  | ||||||| ||||||||| |||||| ||||    
T  17628578 tataagaattgtttggtactacctataccaacaagatgcatcttcttttcgatagcccaacccataagaattccacagttgagcgtgcctga 17628669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9423931 - 9423849
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaag 82  Q
    ||||| ||||||||| ||| |||||||||||||||||||||||||||||  ||||| ||||| ||||||| | |||| |||||    
T  9423931 tataataattgtttggtactacctatatcaacaagatgcatcttctttctagtagcccattccataagaatttcacaattaag 9423849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 27578530 - 27578444
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||| |||| | | ||||||||||||||||||||||||| |||||||| | ||  | |||||||||||| |||||||||||    
T  27578530 tataagaattatttggtgctacctatatcaacaagatgcatcttcttttcggtatcccaaaccataagaactccatagttaagcgtg 27578444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 31817925 - 31817839
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| ||||||| ||||||||||||||||| |||||||||  ||||  ||||||||| || |||||||||||    
T  31817925 tataagaattgttcggtactacctataccaacaagatgcatcttcttttcggtagtccatttcataagaacttcatagttaagcgtg 31817839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 14351884 - 14351949
Alignment:
Q  23 ctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||||||||||| ||| |||| |  |||| |||||||||||||||||||||||||    
T  14351884 ctatatcaacaagatgcatcttctttttggtatcctattccataagaactccacagttaagcgtgt 14351949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 17029403 - 17029479
Alignment:
Q  7 aattgtttgataccacctatatcaacaagatgcatctt-ctttcggtagctcattctataagaactccacagttaag 82  Q
    ||||||||  ||| ||||||||||||||||||||| || |||| |||| || |||| ||||||||||||||||||||    
T  17029403 aattgtttagtactacctatatcaacaagatgcatattacttttggtaccttattccataagaactccacagttaag 17029479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8467873 - 8467826
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt 48  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  8467873 tataagaattgtttggtactacctataccaacaagatgcatcttcttt 8467826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 24271623 - 24271552
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactc 72  Q
    |||||||||| |||||||| |||||||  |||||||||||| || ||| |||||| ||||| ||||||||||    
T  24271623 tataagaattatttgatactacctatacgaacaagatgcatattttttgggtagcccattccataagaactc 24271552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41869985 - 41870032
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt 48  Q
    |||||||||||| |||||| |||||||||||||||| |||||||||||    
T  41869985 tataagaattgtatgatactacctatatcaacaagacgcatcttcttt 41870032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20306234 - 20306151
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| | |||||||||||||||||||||  ||| |||| | ||||  ||||||||| ||| ||||||||||    
T  20306234 tataagaattgtttggtactatctatatcaacaagatgcatct--ttttggtatcccatttcataagaactacacggttaagcgtg 20306151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21067801 - 21067884
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| | | ||||||||||||||||| ||  || ||| |||||  ||||| ||||||||| ||||||||||||||    
T  21067801 tataagaattgtttggtgctacctatatcaacaagataca--tttttttggtagtccattccataagaacttcacagttaagcgtg 21067884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 42838690 - 42838780
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatct---tctttcggtagctcattctataagaac-tccacagttaagcgtgt 87  Q
    ||||| ||||||||| ||| |||||||||||||| ||||||||   | ||||| ||| |||||| |||||||| | |||||||||||||||    
T  42838690 tataaaaattgtttggtactacctatatcaacaaaatgcatctttctttttcgatagttcattccataagaactttcacagttaagcgtgt 42838780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23976292 - 23976245
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt 48  Q
    ||||||||||||||| ||| |||||||  |||||||||||||||||||    
T  23976292 tataagaattgtttggtactacctatactaacaagatgcatcttcttt 23976245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 31817471 - 31817384
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||| ||||||||| ||| ||||||| |||||| |||||||||| |||| | ||| |||||  ||||||||| ||| ||||||||||    
T  31817471 tataataattgtttggtactacctataccaacaaaatgcatcttcttttccgcagcccattccttaagaactctacaattaagcgtgt 31817384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 11828509 - 11828472
Alignment:
Q  49 cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  11828509 cggtagctccttccataagaactccacagttaagcgtg 11828472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 43929033 - 43928989
Alignment:
Q  4 aagaattgtttgataccacctatatcaacaagatgcatcttcttt 48  Q
    |||||||||||| ||| || |||| ||||||||||||||||||||    
T  43929033 aagaattgtttggtactacatataccaacaagatgcatcttcttt 43928989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 53391954 - 53391990
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagat 37  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  53391954 tataaaaattgtttgataccatctatatcaacaagat 53391990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2130 - 2044
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  2130 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 2044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 107542 - 107456
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  107542 tataagaattgtttgatactaccaatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 107456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 6e-30; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10844950 - 10845036
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  10844950 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 10845036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 22026446 - 22026532
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  22026446 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 22026532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12827333 - 12827247
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  12827333 tataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 12827247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 22548628 - 22548542
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||    
T  22548628 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataataactccacagttaagcgtg 22548542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 22549074 - 22548988
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||    
T  22549074 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaaaactccacagttaagcgtg 22548988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 25144839 - 25144925
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  25144839 tataagaattgtttggtactacctatatcagcaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 25144925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 27925966 - 27926052
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  27925966 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 27926052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41659184 - 41659097
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||||| |||||||||  |||||||||||||||||||||||||    
T  41659184 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcgatagctcattacataagaactccacagttaagcgtgt 41659097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10844694 - 10844608
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||| ||||||| ||| |||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  10844694 tataagagttgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 10844608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2044125 - 2044211
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||| ||||| |||| |||||||||||||||||||    
T  2044125 tataagaattgtttgatactacctatatcaacaagatgcattttctttttggtagcccattccataataactccacagttaagcgtg 2044211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 6464989 - 6464903
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||| ||| ||| |||||||||||| |||| |||||||||||||||||||    
T  6464989 tataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataacaactccacagttaagcgtg 6464903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 17103148 - 17103234
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| |||  |||||||||||||| |||||||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  17103148 tataagaattgtttggtactgcctatatcaacaagctgcatcttcttttcggtagctcattccataagaactccacggttaagcgtg 17103234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 25147603 - 25147689
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||| ||||    
T  25147603 tataagaattgtttggtgctacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccatagttaatcgtg 25147689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 25148034 - 25148120
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| |   ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||    
T  25148034 tataagaattgtttggtcttacctatatcaacaagatgcatattcttttcggtagctcattccataagaactccacagttaagcgtg 25148120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 27022417 - 27022331
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||| ||| ||| ||||||||| ||||||||||||||||||||||||    
T  27022417 tataagaattgtttggtactacctatatcaacaacatgcatcttattttcggcagctcattccataagaactccacagttaagcgtg 27022331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 12100758 - 12100844
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||| ||||||| ||| ||||||||||| ||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||    
T  12100758 tataagatttgtttggtactacctatatcaataagatgcatcttcttttcggtagctcatttcataagaacttcacagttaagcgtg 12100844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 28453405 - 28453491
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||  |||||| ||||| |||||||||| |||||||||||||    
T  28453405 tataagaattgttttatactacctatattaacaagatgcatcttctttatggtagcccattccataagaactctacagttaagcgtg 28453491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34308558 - 34308472
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||| |||||| ||| ||||||||||||||||||||||||| ||||||||||  |||| |||||||||||||| |||||||||    
T  34308558 tataagaactgtttggtactacctatatcaacaagatgcatcttcttttcggtagcctattccataagaactccacacttaagcgtg 34308472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 8080420 - 8080335
Alignment:
Q  2 ataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||| ||| |||||| ||||| ||||||||| ||||||||||||||    
T  8080420 ataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaacttcacagttaagcgtg 8080335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 21316185 - 21316106
Alignment:
Q  4 aagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    |||||||||||| ||| |||||||||||||||||||||| || |||| ||||||||||  ||||||||||||||||||||    
T  21316185 aagaattgtttggtactacctatatcaacaagatgcatcgtcttttcagtagctcatttcataagaactccacagttaag 21316106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22840608 - 22840530
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagt 78  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| ||| | |||||||||| ||||||||||||||||    
T  22840608 tataagaattgtttggtactatctatatcaacaagatgcatcttctttttgttagctcattccataagaactccacagt 22840530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 27819324 - 27819238
Alignment:
Q  2 ataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||||||||||||| ||| |||||||||||||| |||||||||| ||||  |||||||||| |||| ||||||||||||||| ||||    
T  27819324 ataagaattgtttggtactacctatatcaacaaaatgcatcttcttttcaatagctcattccataaaaactccacagttaagtgtgt 27819238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32292464 - 32292550
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| | ||||||||||||| ||||||||| ||| | |||| ||||| ||||||||||||||||||||||||    
T  32292464 tataagaattgtttggtactatctatatcaacaagttgcatcttctttttgctagcccattccataagaactccacagttaagcgtg 32292550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41913037 - 41913123
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| | | ||||||||||||||||||| ||||| ||| |||||| ||||| ||||||||||| ||||||||||||    
T  41913037 tataagaattgtttggtgctacctatatcaacaagatgcgtcttctttttggtagcccattccataagaactccgcagttaagcgtg 41913123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 28375133 - 28375038
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgtctgaattc 95  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||| |||||||||||| ||| |||| | || || |||||||||||  |||||||    
T  28375133 tataagaattgtttggtactacctacatcaacaagatgcatcttcttttcggtagctctttccataacagcttcatagttaagcgtgcttgaattc 28375038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 31283719 - 31283648
Alignment:
Q  12 tttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaag 82  Q
    |||| ||| |||||||| ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  31283719 tttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaag 31283648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 34308991 - 34308928
Alignment:
Q  24 tatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||    
T  34308991 tatatcaacaagatgcatcttcttttcggtagcctattccataagaactccacagttaagcgtg 34308928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 33852337 - 33852251
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||| ||||||||| |||||| ||| |||||| ||||| ||||||||| |||| |||||||||    
T  33852337 tataagaattgtttggtactacctatattaacaagatgtatcttctttttggtagcccattccataagaacttcacaattaagcgtg 33852251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 30527561 - 30527479
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    ||||||||||||||| |||||| || ||||| ||||| ||||||| ||| |||||| ||||  ||||||||||||||||||||    
T  30527561 tataagaattgtttggtaccacttacatcaataagatacatcttcttttgggtagcccatttcataagaactccacagttaag 30527479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 25307855 - 25307914
Alignment:
Q  23 ctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagc 83  Q
    ||||||||||||||| |||||| ||| |||||| |||||| ||||||||||||||||||||    
T  25307855 ctatatcaacaagatacatctttttt-ggtagcccattctgtaagaactccacagttaagc 25307914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1297074 - 1297161
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||| ||| ||||||| |||||||||  || ||| |||||||| | |||| ||||||||||||| ||||||| ||||    
T  1297074 tataagaattgtttggtactacctataccaacaagatttatattcttttcggtatcccattatataagaactccatagttaagtgtgt 1297161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15567635 - 15567548
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||||||||||||||| || || |||| ||||||||| ||||||| ||| ||||| |||||  ||||||||||| ||||||| |||||    
T  15567635 tataagaattgtttgacactacatataccaacaagatacatcttctttttggtagttcatttcataagaactccgcagttaatcgtgt 15567548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 15819088 - 15819014
Alignment:
Q  7 aattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaa 81  Q
    ||||||||| ||| || |||||||||| ||||||||||| |||||||||| ||||| ||||||||| |||||||||    
T  15819088 aattgtttggtactacatatatcaacatgatgcatcttcttttcggtagcacattccataagaact-cacagttaa 15819014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22705239 - 22705282
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatctt 44  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  22705239 tataagaattgtttggtactacctatatcaacaagatgcatctt 22705282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27021958 - 27021911
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt 48  Q
    ||||||||||||||| ||| || |||||||||||||||||||||||||    
T  27021958 tataagaattgtttggtactacttatatcaacaagatgcatcttcttt 27021911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3745168 - 3745254
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||| |||||  ||| ||||||| |||||| |||||||||| ||| |||||| ||||| |||| ||||||||||| |||||||    
T  3745168 tataagaactgtttagtactacctataccaacaatatgcatcttctttttggtagcccattccataataactccacagtcaagcgtg 3745254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3744705 - 3744788
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 83  Q
    |||||||||||||||| || ||||||| |||||| ||||| |||| ||| |||||| ||||  |||||||||| ||| ||||||    
T  3744705 tataagaattgtttgacactacctataccaacaatatgcaccttctttttggtagcacatttcataagaactctacaattaagc 3744788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 30334987 - 30334940
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt 48  Q
    ||||| ||||||||||||| ||||||| ||||||||| ||||||||||    
T  30334987 tataaaaattgtttgatactacctataccaacaagatacatcttcttt 30334940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 6e-30; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 28561813 - 28561899
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  28561813 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 28561899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 31284355 - 31284269
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  31284355 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 31284269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13150633 - 13150547
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  13150633 tataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 13150547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 11180113 - 11180027
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  11180113 tataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 11180027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39653231 - 39653313
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||    
T  39653231 tataagaattgttggatactacctatatcaacaagatgcatcttcttttcggtagctcattccatgagaactccacagttaag 39653313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 50347813 - 50347899
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  50347813 tataagaattgttgggtactacctatatcaacaagatgcatcttctttttggtagctcattccataagaactccacagttaagcgtg 50347899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 25239156 - 25239069
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||||||||| |||| ||| ||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||||||||||||||    
T  25239156 tataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtgt 25239069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 39641004 - 39641091
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||| ||||||| ||| ||||||||||| ||||||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  39641004 tataagagttgtttggtactacctatatcaataagatgcatcttctttttggtagctcattccataagaactccacagttaagcgtgt 39641091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2911162 - 2911248
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||| ||||||||||||  ||||||||||||||||||||| ||||||  |||||||||||| ||||||||||||||||||||||||    
T  2911162 tataaaaattgtttgatattacctatatcaacaagatgcatattctttttggtagctcattccataagaactccacagttaagcgtg 2911248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 4067439 - 4067353
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||  ||||||||||||||||||||||||    
T  4067439 tataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattacataagaactccacagttaagcgtg 4067353  T

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Target: chr3; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8067347 - 8067433
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||  ||| |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||||    
T  8067347 tataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccatagttaagcgtg 8067433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13150178 - 13150092
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| |||| ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  13150178 tataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataagaactccacagttaagcgtg 13150092  T

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Target: chr3; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 14814016 - 14814102
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||| ||||||||| ||| ||||||||||| |||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  14814016 tataataattgtttggtactacctatatcaataagatgcatcttcttttcggtagctcgttccataagaactccacagttaagcgtg 14814102  T

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Target: chr3; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 14820221 - 14820307
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| || ||||||||||||||||||||| ||| ||||||||| ||| ||||||||||||||||||||||||    
T  14820221 tataagaattgtttggtactacttatatcaacaagatgcatcttattttcggtagctcgttccataagaactccacagttaagcgtg 14820307  T

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Target: chr3; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 16811448 - 16811534
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| |||||| ||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  16811448 tataagaattgttgggtactacctatttcaacaagatgcatcttcttttcggtagctcattccataagaattccacagttaagcgtg 16811534  T

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Target: chr3; HSP #16
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20885196 - 20885110
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||  ||||| ||||| |||||||||||||| |||||||||    
T  20885196 tataagaattgtttgatactacctatatcaacaagatgcatcttctttttagtagcacattccataagaactccacaattaagcgtg 20885110  T

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Target: chr3; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 27187409 - 27187323
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||  |||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  27187409 tataagaattgtttggtactacctatatcactaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 27187323  T

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Target: chr3; HSP #18
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32227567 - 32227653
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| |||||||| ||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  32227567 tataagaattgttgggtactacctatattaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 32227653  T

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Target: chr3; HSP #19
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32386813 - 32386727
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||| |||| |||||| |||| ||||||||||||||||||||||||    
T  32386813 tataagaattgtttggtactacctatattaacaagatgcatcttcttttcagtagctaattccataagaactccacagttaagcgtg 32386727  T

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Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25238763 - 25238677
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| | || |||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||    
T  25238763 tataagaattgtttggtactatctttatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtg 25238677  T

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Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 25802626 - 25802540
Alignment:
Q  2 ataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| |||| ||||| ||||||| |||||||||||||||||    
T  25802626 ataagaatggtttggtactacctatatcaacaagatgcatcttcttttcgatagcccattccataagaaatccacagttaagcgtgt 25802540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32227300 - 32227214
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| |||||||| |||||||||||||||| ||| |||||||||||  ||||||||||||||||||||||||    
T  32227300 tataagaattgttgggtactacctatattaacaagatgcatcttctttttggtagctcatttcataagaactccacagttaagcgtg 32227214  T

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Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41472367 - 41472453
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| || |||||||||||||||||||||| ||||||||| |||||| ||||||||||||| ||||| ||||    
T  41472367 tataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagatcattccataagaactccacggttaaacgtg 41472453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25230327 - 25230241
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||| |||| ||| ||||||||||||||||| ||||||| ||| |||||| ||||| |||||||||||||||||| |||||    
T  25230327 tataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataagaactccacagttatgcgtg 25230241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25230784 - 25230698
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||| ||| ||| |||||| ||||| |||||||||| ||| |||||||||    
T  25230784 tataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaactcaacaattaagcgtg 25230698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25237914 - 25237828
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||| |||| ||| ||||||||||||||||| ||||||| ||| |||||| ||||| |||||||||||||||||| |||||    
T  25237914 tataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataagaactccacagttatgcgtg 25237828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25238371 - 25238285
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||| ||| ||| |||||| ||||| |||||||||| ||| |||||||||    
T  25238371 tataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaactcaacaattaagcgtg 25238285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 25248178 - 25248264
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||| ||||| |||| |||||||| ||| ||||||    
T  25248178 tataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataataactccacggttcagcgtg 25248264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30529754 - 30529840
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||| |||| ||| ||||||||||||||||||||||||| ||| |||||| ||||| ||||||||| || |||||||||||    
T  30529754 tataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaacttcatagttaagcgtg 30529840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32797014 - 32796936
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagt 78  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||  ||||| ||||| ||||||||||||||||    
T  32797014 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataagaactccacagt 32796936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 37045102 - 37045188
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||  ||||||||||||||| ||||||||| ||| |||| |  |||| ||||||||||||||||||||||||    
T  37045102 tataagaattgtttggtaatacctatatcaacaaggtgcatcttctttttggtaccctattccataagaactccacagttaagcgtg 37045188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7493948 - 7494031
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 83  Q
    |||||||||| |||| ||| || |||||||||||||||||||||| |||||||||| ||  | |||||||||||||| ||||||    
T  7493948 tataagaattttttggtactacttatatcaacaagatgcatcttcttttcggtagcccaaaccataagaactccacatttaagc 7494031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 16810992 - 16811074
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaag 82  Q
    |||||||||||||   ||| | ||||||| |||||||||||||||||| ||||||||||||| ||||||||| |||| |||||    
T  16810992 tataagaattgttgcgtactaactatatctacaagatgcatcttcttttcggtagctcattccataagaacttcacatttaag 16811074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29224391 - 29224477
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||  |||||||||||||||| |||||||||| ||  | ||||||||| |||| |||||||||    
T  29224391 tataagaattgtttggtactacctatactaacaagatgcatcttcttttcggtagcccaaaccataagaacttcacaattaagcgtg 29224477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41474064 - 41474150
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||||||||||  ||||||||||||||||  || ||| ||| ||| | ||||||||||| ||||||||||| |||||||    
T  41474064 tataagaattgtttgatacttcctatatcaacaagattgatattctttttggtggatcattctataaaaactccacagtcaagcgtg 41474150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7477258 - 7477341
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 83  Q
    |||||||||| |||| ||| || |||||||||||||| ||||||| |||||||||| ||  | |||||||||||||| ||||||    
T  7477258 tataagaattttttggtactacttatatcaacaagatacatcttcttttcggtagcccaaaccataagaactccacatttaagc 7477341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26310068 - 26309987
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaa 81  Q
    |||||||||| |||| ||| || |||| ||| ||||||||||||||||  |||||||||||| || ||||||| ||||||||    
T  26310068 tataagaattttttgttactacatataccaaaaagatgcatcttctttatggtagctcattccattagaactcgacagttaa 26309987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 25803081 - 25802997
Alignment:
Q  3 taagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| ||| |||||||  ||||||||| |||||| |||||||| | ||||  |||||||||||  |||||||||||    
T  25803081 taagaattgtttggtactacctataaaaacaagatgtatcttcttttcggtatcccatttcataagaactccgtagttaagcgtg 25802997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 3890046 - 3890088
Alignment:
Q  2 ataagaattgtttgataccacctatatcaacaagatgcatctt 44  Q
    |||||||||||||| ||| || |||||||||||||||||||||    
T  3890046 ataagaattgtttgctactacatatatcaacaagatgcatctt 3890088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 31104039 - 31103955
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtag--ctcattctataagaactccacagttaag 82  Q
    ||||||||||||||||||| | ||||| |||| |||||||| ||| ||| |||||  ||||||| ||||||||| |||| |||||    
T  31104039 tataagaattgtttgatactatctataccaactagatgcattttctttttggtagctctcattccataagaacttcacatttaag 31103955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 6e-30; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30966757 - 30966843
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  30966757 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 30966843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1912592 - 1912677
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  1912592 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttggtagcccattccataagaactccacagttaagcgtg 1912677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8256593 - 8256679
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  8256593 tataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 8256679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29804749 - 29804835
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  29804749 tataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 29804835  T

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Target: chr2; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41754356 - 41754442
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| | |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  41754356 tataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 41754442  T

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Target: chr2; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 11388260 - 11388340
Alignment:
Q  7 aattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  11388260 aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 11388340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 33175025 - 33175112
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||||||    
T  33175025 tataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcatttcataagaactccacagttaagcgtgt 33175112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 33771068 - 33771151
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 83  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||    
T  33771068 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagc 33771151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 5399896 - 5399810
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||||    
T  5399896 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcatagttaagcgtg 5399810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 16379004 - 16379090
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||    
T  16379004 tatacgaattgtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaagcgtg 16379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 24818393 - 24818479
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||  ||| |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  24818393 tataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccacagttaagcgtg 24818479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25434135 - 25434049
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||||| |||||| ||||| ||||||||||||||||||||||||    
T  25434135 tataagaattgtttgatacaacctttatcaacaagatgcatctcctttctggtagcccattccataagaactccacagttaagcgtg 25434049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30966301 - 30966387
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||||||| |||||||||||    
T  30966301 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcattccataagaactccatagttaagcgtg 30966387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 33174570 - 33174656
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||||||||||||    
T  33174570 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcccattccataagaactccgcagttaagcgtg 33174656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16379460 - 16379547
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||| |||||||||| ||| ||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||||||||||||||    
T  16379460 tatacgaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaagcgtgt 16379547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18098957 - 18098874
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 83  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||| |||||||||||| ||||||||    
T  18098957 tataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccataagaactccatagttaagc 18098874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25338076 - 25337990
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||||||||||||||||    
T  25338076 tataagaattgttgggtactacctatatcaacaagatgcatcttcttttcgatagctcatttcataagaactccacagttaagcgtg 25337990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 11394607 - 11394686
Alignment:
Q  7 aattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||| ||| ||||||||||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||    
T  11394607 aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtg 11394686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1707108 - 1707195
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||| |||   |||||||||||||||||||| ||||    
T  1707108 tataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccatctcataagaactccacagttaagagtgt 1707195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 38898991 - 38898905
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||| ||| ||| |||| | ||||  ||||||||||||||||||||||||    
T  38898991 tataagaattgtttggtactacctatatcaacaagatgcattttctttttggtaacacatttcataagaactccacagttaagcgtg 38898905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 29259693 - 29259613
Alignment:
Q  7 aattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||| ||| || |||||||||||||||||||||| |||||||||||||||  ||||||||| || |||||||||||    
T  29259693 aattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcatagttaagcgtg 29259613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 83084 - 83171
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||| ||||| ||| ||||||| |||||||||| ||||| |||  |||||||||||| |||||||||| ||||||||||||||    
T  83084 tataagaatcgtttggtactacctataccaacaagatgaatcttttttttggtagctcattccataagaactctacagttaagcgtgt 83171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30963799 - 30963713
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||| || | | ||||||||||||||||||||||||||||| |||||| ||  | |||| |||||||||||||||||||    
T  30963799 tataagaattgtatggttctacctatatcaacaagatgcatcttctttctggtagcccaaaccataataactccacagttaagcgtg 30963713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8073959 - 8074042
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagc 83  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||||||  ||||| ||||  |||||||||||| || |||||    
T  8073959 tataagaattgtttggtactacctataccaacaagatgcatcttctttcttgtagcccatttcataagaactccatagataagc 8074042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 15619965 - 15620051
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||||  || | | || || |||||||||||||| |||||||||    
T  15619965 tataagaattgtttggtactacctatatcaacaagatacatcttctttttggaaacccaatccataagaactccacaattaagcgtg 15620051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13191041 - 13191121
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagtta 80  Q
    ||||||||||||||| ||| || |||| ||||||||||||||||| ||| |||||  |||| ||||||||||||| |||||    
T  13191041 tataagaattgtttggtactacatataccaacaagatgcatcttctttttggtagtccattttataagaactccatagtta 13191121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 1953222 - 1953269
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt 48  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||||||    
T  1953222 tataagaattgtttggtactacctatatcaactagatgcatcttcttt 1953269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 20502090 - 20502175
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| |||   ||||||||||||||||| |||| ||| |||||| ||||  ||||||||| |||| |||| ||||    
T  20502090 tataagaattgtttggtactttctatatcaacaagatgcttctttttttggtagcccatttcataagaacttcacaattaaacgtg 20502175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 27883005 - 27882918
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcg-gtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||| ||  | ||||||||| ||||||||||||||||   ||||  | ||| |||||||||||||| ||||||||||    
T  27883005 tataagaattgtttggtattatctatatcaataagatgcatcttcttttttgtaggccgttccataagaactccacaattaagcgtgt 27882918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30963342 - 30963299
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatctt 44  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||    
T  30963342 tataagaattgttaggtactacctatatcaacaagatgcatctt 30963299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30961962 - 30961876
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcat-cttctttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||| ||| ||| ||| |||||||||||||||||||||  || ||||||||||  |  | ||||||||||||||||||| ||||    
T  30961962 tataagatttgattggtactacctatatcaacaagatgcatatttttttcggtagccgaaaccataagaactccacagttaaacgtg 30961876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 32377749 - 32377712
Alignment:
Q  46 tttcggtagctcattctataagaactccacagttaagc 83  Q
    |||||||||||||||| | |||||||||||||||||||    
T  32377749 tttcggtagctcattccaaaagaactccacagttaagc 32377712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 6e-30; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20054159 - 20054073
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20054159 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20054073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20054615 - 20054529
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20054615 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20054529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20055071 - 20054985
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20055071 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20054985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20055527 - 20055441
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20055527 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20055441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20055983 - 20055897
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20055983 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20055897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20056439 - 20056353
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20056439 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20056353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20057342 - 20057256
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20057342 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20057256  T

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Target: chr1; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20057798 - 20057712
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20057798 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20057712  T

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Target: chr1; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20845740 - 20845654
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20845740 tataagaattgtttgttactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20845654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 20056891 - 20056808
Alignment:
Q  5 agaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20056891 agaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgt 20056808  T

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Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 43057141 - 43057058
Alignment:
Q  4 aagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  43057141 aagaattgtttgatactacctatatcaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaagcgtg 43057058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 50002786 - 50002699
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  50002786 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattctttaagaactccatagttaagcgtgt 50002699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 2634992 - 2635078
Alignment:
Q  2 ataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  2634992 ataagaattgtttggtactacctataccaacaagatgcatcttcttttcggtagctcattcaataagaactccacagttaagcgtgt 2635078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 20060419 - 20060337
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  20060419 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaag 20060337  T

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Target: chr1; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 20061270 - 20061188
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  20061270 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaag 20061188  T

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Target: chr1; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 38340973 - 38341059
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  38340973 tataagaattgtttggtactacctatatcaacaagatgcatcttcatttcggtagctcattccataagaacttcacagttaagcgtg 38341059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 52250273 - 52250359
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  52250273 tataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 52250359  T

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Target: chr1; HSP #18
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 16452012 - 16451926
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  16452012 tataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagttcattccataagaactccacagttaagcgtg 16451926  T

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Target: chr1; HSP #19
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 16461165 - 16461079
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  16461165 tataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagttcattccataagaactccacagttaagcgtg 16461079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 43057602 - 43057516
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  43057602 tataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaagcgtg 43057516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 50002364 - 50002285
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagtt 79  Q
    ||||||||||||||| ||| |||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  50002364 tataagaattgtttggtactacctttatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtt 50002285  T

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Target: chr1; HSP #22
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35759687 - 35759601
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||| ||||    
T  35759687 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcatagttaaacgtg 35759601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 51372953 - 51372867
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||  ||| ||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  51372953 tataagaattgtttagtactacctatatcgacaagatgcatcttattttcggtagctcattccataagaactccacagttaagcgtg 51372867  T

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Target: chr1; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 30873027 - 30872946
Alignment:
Q  3 taagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 83  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||| |||||  |||||||||||||||||||| ||||||    
T  30873027 taagaattgtttgatactacctatatcaacaagatgcatcttctttttggtagtccattctataagaactccacaattaagc 30872946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 12883591 - 12883678
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||| ||| ||||||||||||||||||||| ||| ||| |||||||||||| |||| ||||||||||||||| ||||    
T  12883591 tataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataaaaactccacagttaagtgtgt 12883678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35760993 - 35760907
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||| || ||||||||  |||||||||||    
T  35760993 tataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccatgagaactccgtagttaagcgtg 35760907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 46693814 - 46693728
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||| |||||||| ||||||  |||| |||||||||||||||||||    
T  46693814 tataaaaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcatttcataataactccacagttaagcgtg 46693728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2328382 - 2328463
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaa 81  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||| ||| |||||| ||||| |||||||||||||||||||    
T  2328382 tataagaattgtttggtactacctatattaacaagatgcatcttctttttggtagcacattccataagaactccacagttaa 2328463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 12728058 - 12728142
Alignment:
Q  1 tataagaattgtttgat-accacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagc 83  Q
    ||||||||||||||| | ||  ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  12728058 tataagaattgtttggttactgcctatatcaacaagatgcatcttcttttcggtagcacattccataagaactccacagttaagc 12728142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 50003154 - 50003068
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||| ||||||| | ||| ||||||||||||||||||||||||| |||| ||||||||||| | ||||||| ||||||||||||||    
T  50003154 tataataattgttgggtactacctatatcaacaagatgcatcttcttttcagtagctcattccaaaagaacttcacagttaagcgtg 50003068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 31822742 - 31822657
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgt 85  Q
    |||||||||| |||| ||| || ||||||||||| ||||||||||||| |||||||||| || | |||||||||||||||||||||    
T  31822742 tataagaattatttggtactacatatatcaacaatatgcatcttcttttcggtagctcaatccaaaagaactccacagttaagcgt 31822657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16907301 - 16907388
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||| |||| || |  ||||||| |||||||||| ||||||||||||    
T  16907301 tataagaattgtttggtactacctatatcaacaagatacatcttcttttcagtggtccattctacaagaactccatagttaagcgtgt 16907388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 52250641 - 52250696
Alignment:
Q  32 caagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  52250641 caagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 52250696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 52250978 - 52251033
Alignment:
Q  32 caagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  52250978 caagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 52251033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 23180797 - 23180883
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttct-ttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||| ||| ||| |||||||||||||||||| ||||||| |||| |||| ||||| ||||||| |||||| |||||||||    
T  23180797 tataagaattgcttggtactacctatatcaacaagatgtatcttctattcgctagcccattccataagaattccacaattaagcgtg 23180883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16440658 - 16440576
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    |||||||| |||||| ||| ||| ||| ||||||||||||| ||| ||| ||||||||||||||||| |||| || |||||||    
T  16440658 tataagaactgtttgctactaccgataacaacaagatgcatattctttttggtagctcattctataataacttcaaagttaag 16440576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 7548158 - 7548243
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgt 85  Q
    ||||| ||||||||| ||  | ||||||||||||||||||| ||| ||| |||||| ||||  |||||||||||||| ||||||||    
T  7548158 tataaaaattgtttggtattaactatatcaacaagatgcatattctttttggtagcccatttgataagaactccacaattaagcgt 7548243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 31823161 - 31823097
Alignment:
Q  3 taagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataa 66  Q
    |||||||| |||| ||| ||||||||||| || |||||||||| ||| |||||||||||| ||||    
T  31823161 taagaattatttggtactacctatatcaataaaatgcatcttctttttggtagctcattccataa 31823097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 18213 - 18128
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||||    
T  18213 tataagaattgtttgatactacctatatcaacaagatgcatctttttttggtagctaattccataagaactccacagttaagcgtg 18128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 17677 - 17591
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||| |||| |||||| ||| ||||||||| |  ||||||||||||||||||||||||    
T  17677 tataagaattgtttggtactacctatatcaacaggatgtatcttctttttggtagctcaattcataagaactccacagttaagcgtg 17591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 2474475 - 2474558
Alignment:
Q  4 aagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  2474475 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 2474558  T

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Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3886680 - 3886593
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  3886680 tatatgaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgt 3886593  T

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Target: chr5; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2193883 - 2193969
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  2193883 tataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 2193969  T

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Target: chr5; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2474026 - 2474112
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  2474026 tataagaattgtttggtactgcctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 2474112  T

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Target: chr5; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 8642113 - 8642027
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||| |||| ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  8642113 tataagaattatttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 8642027  T

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Target: chr5; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 17445534 - 17445448
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctt-tcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  17445534 tataagaattgtttggtactacctatatcaacaagatgcatcttcttatcggtagctcattccataagaaatccacagttaagcgtg 17445448  T

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Target: chr5; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 42788725 - 42788639
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  42788725 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccacaagaactccacagttaagcgtg 42788639  T

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Target: chr5; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 189135 - 189218
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 83  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||    
T  189135 tataagaattgtttggtactacctatatcaacaagatgtatcttcttttcggtagctcattccataagaactccacagttaagc 189218  T

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Target: chr5; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 22556603 - 22556694
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgtctga 91  Q
    |||| |||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||    
T  22556603 tatatgaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattctttaagaacttcacagttaagcgtggctga 22556694  T

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Target: chr5; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 34371682 - 34371765
Alignment:
Q  4 aagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  34371682 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacaccacagttaagcgtg 34371765  T

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Target: chr5; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 34372138 - 34372221
Alignment:
Q  4 aagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  34372138 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcacagttaagcgtg 34372221  T

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Target: chr5; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34867857 - 34867943
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||  |||||||||||| |||||||||||    
T  34867857 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccatagttaagcgtg 34867943  T

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Target: chr5; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 22557036 - 22557127
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtgtctga 91  Q
    |||| |||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||    
T  22557036 tatatgaattgtttggtactaccaatatcaacaagatgcatcttcttttcggtagctcattctttaagaacttcacagttaagcgtgcctga 22557127  T

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Target: chr5; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1821973 - 1822059
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||| |||||||||    
T  1821973 tataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacatttaagcgtg 1822059  T

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Target: chr5; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10927482 - 10927396
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||| ||||    
T  10927482 tataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaaacgtg 10927396  T

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Target: chr5; HSP #16
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 21886225 - 21886143
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    ||||||||||||||| ||| || |||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  21886225 tataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcattccataagaactccaaagttaag 21886143  T

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Target: chr5; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 39147006 - 39147092
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||||||| || ||||| |||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||    
T  39147006 tataagaattgtttgatactacttatattaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtg 39147092  T

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Target: chr5; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 20039553 - 20039472
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaag 82  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |||||| |||||| ||||| |||||||||| |||||||||    
T  20039553 tataagaattgtttggtactacctatatcaacaagatgcattttcttttggtagcccattccataagaactctacagttaag 20039472  T

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Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3887136 - 3887050
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||| ||||| |||| ||| ||||||||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||||    
T  3887136 tatatgaattatttggtactacctatatcaacaagatgcatcttcttttcggtaactcattccataagaacttcacagttaagcgtg 3887050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10927025 - 10926939
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatctt-ctttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| |||| |||||  ||||| ||||||||||||||||||| ||||    
T  10927025 tataagaattgtttggtactacctatatcaacaagatgcatcttccttttggtagtccattccataagaactccacagttaaacgtg 10926939  T

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Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 27646914 - 27646828
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||||| ||| |||||| ||||  ||||||||||||||||||||||||    
T  27646914 tataagaattgtttggtactacctataacaacaagatgcatcttctttttggtagcccatttcataagaactccacagttaagcgtg 27646828  T

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Target: chr5; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 18304504 - 18304581
Alignment:
Q  7 aattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 83  Q
    ||||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||    
T  18304504 aattgtttggtactacctatatcaacaagatgcatattcttttcggtagctcattccataagaattccacagttaagc 18304581  T

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Target: chr5; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 8391400 - 8391315
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| |||  ||| ||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||||    
T  8391400 tataagaattgtttggtact-cctgtatcaacaagatgcatcttcttttcggtagctaattccataagaactccatagttaagcgtg 8391315  T

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Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 29680166 - 29680099
Alignment:
Q  21 acctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtgt 87  Q
    ||||||||||||||||||||||||| ||| |||||| ||||  |||||||||||||||||||||||||    
T  29680166 acctatatcaacaagatgcatcttctttttggtagcccattacataagaactccacagttaagcgtgt 29680099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4673550 - 4673466
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcg 84  Q
    |||||||||| |||| || ||||| |||||||||||||||| ||| ||| ||||  |||||| ||||||||||||||||||||||    
T  4673550 tataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaagcg 4673466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 11757337 - 11757274
Alignment:
Q  24 tatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||| ||||||||||||| |||||| ||| || ||||||||||||||||||||||||    
T  11757337 tatatcaacaaaatgcatcttcttttcggtagttcaatccataagaactccacagttaagcgtg 11757274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 15513090 - 15513005
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| ||| ||||||||||||||||||||| ||| |||| ||||||| |||||||||||||| |||| ||||    
T  15513090 tataagaattgttgg-tactaccaatatcaacaagatgcatcttctttttggtatctcattccataagaactccacaattaaacgtg 15513005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18750275 - 18750201
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactcca 74  Q
    ||||| ||||||||| ||| ||||||| ||| ||||||||||||| ||||||||||| |||| ||||||||||||    
T  18750275 tataacaattgtttggtactacctataccaaaaagatgcatcttcttttcggtagcttattccataagaactcca 18750201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 20858620 - 20858538
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaag 82  Q
    ||||||||||||||| ||    ||||||||||||||||| |||||||| | ||||||||||| |||||||||||| |||||||    
T  20858620 tataagaattgtttggtattttctatatcaacaagatgcttcttcttttctgtagctcattccataagaactccatagttaag 20858538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30684635 - 30684549
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||| |||||||||| ||| | |||||  ||||||||||||||||||| |||||| |||  | ||||||||||||||||||||||||    
T  30684635 tatatgaattgtttggtactatctataaaaacaagatgcatcttcttttcggtaggtcaaaccataagaactccacagttaagcgtg 30684549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30719884 - 30719798
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||| |||||||||| ||| |||||||  |||||||||||||||| ||||||||| |||  | |||||||||||||| |||||||||    
T  30719884 tatatgaattgtttggtactacctataaaaacaagatgcatcttcttttcggtaggtcaaaccataagaactccacaattaagcgtg 30719798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 4658072 - 4657992
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagtta 80  Q
    ||||||| ||||||||||| ||||||| |||||| |||||||||| ||| |||||  ||||| ||||||||| ||||||||    
T  4658072 tataagacttgtttgatactacctataacaacaacatgcatcttctttttggtagtccattccataagaacttcacagtta 4657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24182324 - 24182239
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||| |||| ||| | ||||| ||||||||||||||||||||||||| | ||  | |||| ||||  |||||||||||||    
T  24182324 tataagaattatttggtactatctataccaacaagatgcatcttctttcggtaccccaaaccataataacttaacagttaagcgtg 24182239  T

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Target: scaffold0243 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1287 - 1373
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  1287 tataagaattgtttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 1373  T

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Target: scaffold0024 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 105787 - 105873
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  105787 tataagaattgtttggtactacctatatcaacaaaatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 105873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 1e-27; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 13492399 - 13492485
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  13492399 tataagaattgtttgatattacctatatcaacaagatgcatcttcttttcggtagctaattccataagaactccacagttaagcgtg 13492485  T

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Target: chr6; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 13492856 - 13492942
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||| ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  13492856 tataataattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 13492942  T

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Target: chr6; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7911945 - 7912025
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagtta 80  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  7911945 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtta 7912025  T

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Target: chr6; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 15929649 - 15929736
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtgt 87  Q
    |||||||||| |||| ||| |||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  15929649 tataagaattatttggtactacctatatcaacaaaatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgt 15929736  T

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Target: chr6; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2681295 - 2681209
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  2681295 tataagaattgtttggtactacccatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacaattaagcgtg 2681209  T

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Target: chr6; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 6330991 - 6330905
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||||||||| |||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  6330991 tataagaattgtttggtactacctatatcaacaatatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 6330905  T

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Target: chr6; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13191592 - 13191506
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||||||||||||    
T  13191592 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcgttccataagaacttcacagttaagcgtg 13191506  T

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Target: chr6; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 16520043 - 16520121
Alignment:
Q  9 ttgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  16520043 ttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 16520121  T

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Target: chr6; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 17027610 - 17027524
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  17027610 tataagaattgtttggtactacctatatcaacaagattcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 17027524  T

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Target: chr6; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 20850388 - 20850474
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  20850388 tataagaattgttttgtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactctacagttaagcgtg 20850474  T

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Target: chr6; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20896767 - 20896681
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| ||||||||||    
T  20896767 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcattccataagaactccacggttaagcgtg 20896681  T

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Target: chr6; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 9352137 - 9352215
Alignment:
Q  9 ttgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||| ||| |||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  9352137 ttgtttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 9352215  T

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Target: chr6; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3652553 - 3652634
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaa 81  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| ||| ||||| |||||| |||||||||||||||||||    
T  3652553 tataagaattgtctgatactacctatatcaacaagatgcatcttctttttggtagttcattccataagaactccacagttaa 3652634  T

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Target: chr6; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 17850994 - 17851071
Alignment:
Q  10 tgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||| ||| |||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  17850994 tgtttggtactacctttatcaacaagatgcatcttctttctggtagcccattctataagaactccacagttaagcgtg 17851071  T

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Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 7912377 - 7912463
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||| |||||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| |||||| ||||    
T  7912377 tatatgaattgtttggtactacctatatcaacaagatgcattttcttttcggtagctcattccataagaactccatagttaaacgtg 7912463  T

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Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 11062352 - 11062438
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||| |||||  ||| ||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||    
T  11062352 tataagaagtgttttgtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtg 11062438  T

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Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20126261 - 20126175
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||| ||| |||||| ||||| ||||||| |||||| |||||||||    
T  20126261 tataagaatggtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataagaattccacaattaagcgtg 20126175  T

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Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 20735762 - 20735844
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    ||||||||||||||||||| || |||||||||||||||||||||| |||||||||  |||||||||| ||||||| |||||||    
T  20735762 tataagaattgtttgatactacttatatcaacaagatgcatcttcttttcggtagtccattctataaaaactccatagttaag 20735844  T

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Target: chr6; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 17731192 - 17731102
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagat----gcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||||||||||||    ||||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  17731192 tataagaattgtttggtactacctatatcaacaagatagatgcatcttcttttcggtagctcattctttaagaactccacatttaagcgtg 17731102  T

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Target: chr6; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27334228 - 27334301
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactcc 73  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||||||| |||||||||||    
T  27334228 tataagaattgtttggtactacctatatcaacaagatgaatcttcttttcggtagctcattccataagaactcc 27334301  T

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Target: chr6; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27394968 - 27395041
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactcc 73  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||||||| |||||||||||    
T  27394968 tataagaattgtttggtactacctatatcaacaagatgaatcttcttttcggtagctcattccataagaactcc 27395041  T

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Target: chr6; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 17851441 - 17851527
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||  |||||| ||| |||| |||||||||||||||||||||||  |||||| |||||||||||||||||||| |||||||||    
T  17851441 tataagatatgtttggtactacctttatcaacaagatgcatcttctttttggtagcccattctataagaactccacaattaagcgtg 17851527  T

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Target: chr6; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23986396 - 23986314
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||| |||||||||||||  | ||||||||| ||||||||||    
T  23986396 tataagaattgtttggtactacctatatgaacaagatgcatcttcttttcggtagctcaaaccataagaacttcacagttaag 23986314  T

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Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2890918 - 2890832
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| |  || ||||||||||| ||||||| |||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  2890918 tataagaattgttagggactacctatatcaaaaagatgcttcttcttttcagtagcccattccataagaactccacagttaagcgtg 2890832  T

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Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9440388 - 9440306
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    ||||||||||||| | ||| || |||||||||||||||||| ||| ||||||||||||| || ||||||||| ||||||||||    
T  9440388 tataagaattgttcggtactacttatatcaacaagatgcattttcttttcggtagctcactccataagaacttcacagttaag 9440306  T

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Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 28583030 - 28583112
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaag 82  Q
    |||||||||| |||||||| | |||||||||||||||||||| ||||| |||||| |||||| ||||||| ||||||| ||||    
T  28583030 tataagaattatttgatacgatctatatcaacaagatgcatcatctttccggtagttcattccataagaaatccacagctaag 28583112  T

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Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 23776508 - 23776592
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgt 85  Q
    ||||||||| || || ||| ||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||| ||||||||    
T  23776508 tataagaatcgtctggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcaca-ttaagcgt 23776592  T

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Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 2720643 - 2720560
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc--ggtagctcattctataagaactccacagttaag 82  Q
    ||||||||||||||| ||| |||||||| |||||||  |||||| |||   |||||||||||| ||||||||||||||||||||    
T  2720643 tataagaattgtttggtactacctatattaacaagacacatctttttttttggtagctcattccataagaactccacagttaag 2720560  T

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Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21311582 - 21311668
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||  ||||| || |||||||| ||||||||||  || ||||||||| ||||||||||| ||||||||||||    
T  21311582 tataagaattgtttggtattacctagataaacaagatccatcttctttttggaagctcattccataagaactccgcagttaagcgtg 21311668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21312038 - 21312124
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||| ||| |||||| ||||  ||||||| |||| |||||| ||||    
T  21312038 tataagaattgttaggtactacctatatcaacaagatgcatcttctttttggtagcccatttcataagaaatccatagttaaacgtg 21312124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 28780209 - 28780263
Alignment:
Q  33 aagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  28780209 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtg 28780263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17205406 - 17205479
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactcca 74  Q
    ||||||||||||||| ||| |||| || ||||||||| |||||| ||| |||||| ||||| ||||||||||||    
T  17205406 tataagaattgtttggtactacctttaccaacaagattcatcttgttttggtagcccattccataagaactcca 17205479  T

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Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 15929266 - 15929338
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactc 72  Q
    ||||||||||||||| ||   |||||||||| ||||||||| ||| |||||||||||||||| ||||||||||    
T  15929266 tataagaattgtttggtaatgcctatatcaataagatgcatattcttttcggtagctcattccataagaactc 15929338  T

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Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 1991623 - 1991701
Alignment:
Q  4 aagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaa 81  Q
    |||||||||||| ||  || ||| | ||||||||||||||||||| ||||||||||||  ||||||||| |||||||||    
T  1991623 aagaattgtttggtattacatatctaaacaagatgcatcttcttttcggtagctcatttcataagaacttcacagttaa 1991701  T

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Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14771798 - 14771716
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagctcattctataagaactccacagttaag 82  Q
    ||||||||||||||| ||| ||||||||||||||||| ||| ||||||  ||||    |||| ||||||||||||||||||||    
T  14771798 tataagaattgtttggtactacctatatcaacaagatccatattctttttggtaatctattccataagaactccacagttaag 14771716  T

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Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 28065917 - 28065831
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttc----ggtagctcattctataagaactccacagttaagc 83  Q
    ||||||||||||||| ||| | || ||||||||||||||||||| |||     ||||||| |||| |||||||||||||| ||||||    
T  28065917 tataagaattgtttggtactatctctatcaacaagatgcatctttttttttttggtagcttattccataagaactccacaattaagc 28065831  T

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Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31821771 - 31821704
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatc-ttctttcggtagctcattctataag 67  Q
    |||||||||| |||| ||| | |||||||||||||||||||| || ||| |||||||||||| |||||    
T  31821771 tataagaattatttggtactaactatatcaacaagatgcatcttttttttggtagctcattccataag 31821704  T

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Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 33775083 - 33774994
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaaga--tgcatcttctttcgg-tagctcattctataagaactccacagttaagcgtgt 87  Q
    |||||||||||| || | | ||||||||||||||||  ||||||||||||  | |||  ||||| |||||||||||||||||||| ||||    
T  33775083 tataagaattgtctggtgctacctatatcaacaagagatgcatcttctttttgatagtccattccataagaactccacagttaagtgtgt 33774994  T

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Target: scaffold0333 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 4631 - 4710
Alignment:
Q  4 aagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaag 82  Q
    |||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  4631 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattttataagaactccacagttaag 4710  T

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Target: scaffold0333; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 5091 - 5174
Alignment:
Q  4 aagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||| ||| |||||||| |||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  5091 aagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 5174  T

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Target: scaffold0322 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 19033 - 19119
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  19033 tataagaattgtttggtactacctatatcaacaagattcatcttcttttcggtagctcatttcataagaactccacagttaagcgtg 19119  T

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Target: scaffold0168 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2809 - 2895
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||    
T  2809 tataagaattgttgggtactacctatatcaacaagatgcatattcttttcggtagctcattccataagaactccacagttaagcgtg 2895  T

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Target: scaffold0022 (Bit Score: 59; Significance: 3e-25; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 162757 - 162671
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  162757 tataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccgcagttaagcgtg 162671  T

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Target: scaffold0022; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 163167 - 163224
Alignment:
Q  30 aacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  163167 aacaagatgcatcttcttttcggtagctcattctttaagaattccacagttaagcgtg 163224  T

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Target: scaffold0022; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 69894 - 69814
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatc-ttctttcggtagctcattctataagaactccacagtta 80  Q
    ||||| ||||||||| ||| ||||||||||||| |||||||| || ||||  |||||||||| ||||||||||||||||||    
T  69894 tataataattgtttggtactacctatatcaacatgatgcatctttttttcattagctcattccataagaactccacagtta 69814  T

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Target: scaffold0022; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 163181 - 163127
Alignment:
Q  33 aagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  163181 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtg 163127  T

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Target: scaffold0018 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10367 - 10453
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||  ||| |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  10367 tataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccacagttaagcgtg 10453  T

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Target: scaffold0389 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 13592 - 13526
Alignment:
Q  21 acctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  13592 acctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 13526  T

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Target: scaffold0040 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2289 - 2203
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||| |||| |||||||||| | |||||||||||    
T  2289 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataagaactcaatagttaagcgtg 2203  T

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Target: scaffold0002 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 154824 - 154910
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||| | ||| |||| ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  154824 tataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataagaactccacagttaagcgtg 154910  T

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Target: scaffold0005 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 245153 - 245228
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttctttcggtagctcattctataagaactccaca 76  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||  |  | ||||||||||||||    
T  245153 tataagaattgtttggtactacctatatcaacaagatgcatcttctttcggtagcctaaaccataagaactccaca 245228  T

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Target: scaffold0005; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 245582 - 245668
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||| | |||||  |  | ||||||||||||||||||||||||    
T  245582 tataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagcctaaaccataagaactccacagttaagcgtg 245668  T

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Target: scaffold0557 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 2172 - 2255
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 83  Q
    ||||||||||||||| |||  ||||||| |||||||||||||||| ||| |||||| |||||  ||||||||||||||||||||    
T  2172 tataagaattgtttggtactccctatataaacaagatgcatcttctttttggtagcccattccttaagaactccacagttaagc 2255  T

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Target: scaffold0007 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 142353 - 142306
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttcttt 48  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  142353 tataagaattgtttggtactacctatatcaacaagatgcatcttcttt 142306  T

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Target: scaffold0277 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 14749 - 14695
Alignment:
Q  33 aagatgcatcttcttt-cggtagctcattctataagaactccacagttaagcgtg 86  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  14749 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtg 14695  T

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Target: scaffold0088 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23740 - 23785
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttct 46  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  23740 tataagaattgtttggtactacctatatcaacaagatgcatcttct 23785  T

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Target: scaffold0664 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 4061 - 3993
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataaga 68  Q
    ||||||||||||||| ||| |||| |||||||||||||||||||| ||| |||||| |||| |||||||    
T  4061 tataagaattgtttggtactacctgtatcaacaagatgcatcttctttttggtagcccattttataaga 3993  T

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Target: scaffold0391 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14808 - 14891
Alignment:
Q  1 tataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactccacagttaagc 83  Q
    ||||||||||||||| ||  ||||||||||| |||||||||| || ||||||||  |||||  ||||||||| |||||||||||    
T  14808 tataagaattgtttggtaatacctatatcaataagatgcatcgtcttttcggtaattcattgaataagaacttcacagttaagc 14891  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 26143 - 26211
Alignment:
Q  7 aattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagctcattctataagaactcca 74  Q
    |||| |||| ||| || |||||||||| ||||||||||| ||| ||||||||||| |||||||||||||    
T  26143 aattttttggtactacatatatcaacatgatgcatcttctttttggtagctcattttataagaactcca 26211  T

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