View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11280A_low_191 (Length: 251)
Name: NF11280A_low_191
Description: NF11280A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11280A_low_191 |
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Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 40606415 - 40606657
Alignment:
| Q |
1 |
aatattatataattttaaaataattaaataagacatattttgatgtgtatgtctaatattgtgttcaatgcgaccatacaagtattttccatgctatatt |
100 |
Q |
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| T |
40606415 |
aatattatataactttaaaataattaaataagacatattttgatgtgtatgtctaatattgtgttcaatgcgaccatacaagtattttccatgc--tatg |
40606512 |
T |
|
| Q |
101 |
aaccacttgctgatccaatatgtgtaactgttctaaccttctcattgttcgtaaatctaaatctaaccacgtttgagttgnnnnnnngcgttggactaaa |
200 |
Q |
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| T |
40606513 |
aaccacttgctgatccaatatgtgtaactgttctaaccttctcattgttcgtaaatctaaatctaaccgcgtttgagttgaaaaaaagcgttggactaaa |
40606612 |
T |
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| Q |
201 |
ccaatttgtattgagtctaaccgaactaaaccaagttcatctcag |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
40606613 |
ccaatttgtattgagtctaaccgaactaaaccaagttcaactcag |
40606657 |
T |
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