View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11280A_low_205 (Length: 250)
Name: NF11280A_low_205
Description: NF11280A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11280A_low_205 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 15 - 249
Target Start/End: Complemental strand, 25177873 - 25177639
Alignment:
| Q |
15 |
actatattatggtcattaaagggggttagaattataggcataaactaggtaagattttaaaagtttgggacctaacaaattgtaggtagttgggtaaagt |
114 |
Q |
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| T |
25177873 |
actatattatggtcattaaagggggttagaattataggcataaactaggtaagattttaaaagtttgggacctaacaaattgtaggtagttgagtaaagt |
25177774 |
T |
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| Q |
115 |
cgtgtgtgttaaacatcaaattcaccttcaatttattatttgtagcaaatcttttttgacaagttcagcctttaatatttctaactatcgagtgggtggt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25177773 |
cgtgtgtgttaaacatcaaattcaccttcaatttattatttgtagcaaatcttttttgacaagttcagcctttaatatttctaactatcgagtgggtggt |
25177674 |
T |
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| Q |
215 |
aggttcaaattaacgtttgttgattactttttcaa |
249 |
Q |
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||||||||||||||||||||||||||||| ||||| |
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| T |
25177673 |
aggttcaaattaacgtttgttgattacttattcaa |
25177639 |
T |
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