View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11280A_low_221 (Length: 247)
Name: NF11280A_low_221
Description: NF11280A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11280A_low_221 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 8 - 229
Target Start/End: Original strand, 50386241 - 50386462
Alignment:
| Q |
8 |
gaaaagaataacaatgcctctaaaaacctattccccaacaaatgcaactatttcaatctcacctcactcatcatatttctccatcccccaactagtttcc |
107 |
Q |
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| T |
50386241 |
gaaaagaataacaatgcctctaaaaacctattcaccaacaaatgcaactatttcaatttcacctcactcatcatatttctccatccaccaactagtttcc |
50386340 |
T |
|
| Q |
108 |
caacaaaccacatttctaagaaggatgtcaaaattgacaagataagtatagaccaagcaatttccttctacacaagaatcttgaaaaccaaagagttgta |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50386341 |
caacaaaccacatttctaagaaggatgtcaaaattgacaagataagtatagaccaagcaatttccttctacacaagaatcttgaaaaccaaagagttgta |
50386440 |
T |
|
| Q |
208 |
tccattagatatggacattatt |
229 |
Q |
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|||||||||||||||||||||| |
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| T |
50386441 |
tccattagatatggacattatt |
50386462 |
T |
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