View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11280A_low_241 (Length: 242)
Name: NF11280A_low_241
Description: NF11280A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11280A_low_241 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 41404157 - 41404394
Alignment:
| Q |
1 |
aatatcacatttacgttgaagctataaatagtagattctggttttggcagccaaaagaccttcaatcgtgtggccgcaatgaaatgatgtgtatgaaagt |
100 |
Q |
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| T |
41404157 |
aatatcacatttacgttgaagctataaatagtagattctggtattcgcagtcaaaagaccttcaatcgtgtggctgcaatgaaatgatgtgtatgaaagt |
41404256 |
T |
|
| Q |
101 |
aggaatcagaccctataagacatgtttgatagattacgagtcaattagagtcatttttggcatgtgctctactcgcaagcaattgtgttccttgacttcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41404257 |
aggaatcagaccctataagacatgtttgatagattacgagtcaattagagtcatttttggcatgtgctctactcgcaagcaattgtgttccttgacttcc |
41404356 |
T |
|
| Q |
201 |
ttctaagtcgattgaacagaaaccatatgaaatatgtg |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
41404357 |
ttctaagtcgattgaacagaaaccatatgaaatatgtg |
41404394 |
T |
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