View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11280A_low_257 (Length: 238)

Name: NF11280A_low_257
Description: NF11280A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11280A_low_257
NF11280A_low_257
[»] chr2 (59 HSPs)
chr2 (3-118)||(41569469-41569585)
chr2 (143-238)||(18176996-18177091)
chr2 (143-237)||(41569317-41569411)
chr2 (143-238)||(433906-434001)
chr2 (143-237)||(29051576-29051668)
chr2 (145-215)||(37257508-37257578)
chr2 (143-234)||(4952404-4952495)
chr2 (143-234)||(42223876-42223967)
chr2 (143-221)||(42678805-42678884)
chr2 (157-234)||(7552625-7552704)
chr2 (143-234)||(4758563-4758654)
chr2 (143-238)||(26738801-26738895)
chr2 (143-238)||(31389603-31389698)
chr2 (155-238)||(5200146-5200228)
chr2 (164-238)||(670392-670466)
chr2 (143-221)||(6999005-6999083)
chr2 (144-237)||(29879899-29879992)
chr2 (153-237)||(2464171-2464254)
chr2 (143-227)||(7574491-7574575)
chr2 (143-227)||(10711780-10711864)
chr2 (153-221)||(32869892-32869960)
chr2 (143-215)||(39213713-39213785)
chr2 (143-234)||(35705550-35705640)
chr2 (143-234)||(40936988-40937079)
chr2 (164-234)||(5027233-5027303)
chr2 (143-221)||(6170686-6170764)
chr2 (180-238)||(17779475-17779533)
chr2 (157-238)||(4753231-4753311)
chr2 (155-237)||(6941011-6941089)
chr2 (143-200)||(28245784-28245841)
chr2 (157-238)||(28679387-28679467)
chr2 (4-57)||(41588523-41588576)
chr2 (143-228)||(44711919-44712004)
chr2 (143-238)||(42866806-42866901)
chr2 (143-238)||(2221049-2221144)
chr2 (143-238)||(5054664-5054759)
chr2 (156-215)||(20911870-20911929)
chr2 (153-228)||(28244171-28244245)
chr2 (143-221)||(9634373-9634451)
chr2 (156-238)||(18876841-18876923)
chr2 (143-221)||(25881600-25881678)
chr2 (143-221)||(35589324-35589402)
chr2 (143-180)||(36802952-36802989)
chr2 (143-199)||(42532697-42532754)
chr2 (143-238)||(9377512-9377607)
chr2 (143-221)||(13347751-13347830)
chr2 (144-191)||(26277152-26277199)
chr2 (143-193)||(4139272-4139322)
chr2 (143-221)||(15269917-15269995)
chr2 (143-221)||(29712034-29712112)
chr2 (143-177)||(34119633-34119667)
chr2 (143-177)||(38560734-38560768)
chr2 (143-200)||(42372535-42372593)
chr2 (143-200)||(18723650-18723707)
chr2 (143-212)||(39449323-39449392)
chr2 (156-192)||(13711332-13711368)
chr2 (155-199)||(17999636-17999680)
chr2 (143-238)||(23352827-23352920)
chr2 (143-198)||(40700251-40700307)
[»] chr5 (42 HSPs)
chr5 (143-237)||(5042304-5042398)
chr5 (143-238)||(35098925-35099020)
chr5 (153-234)||(2688910-2688991)
chr5 (143-215)||(18842264-18842336)
chr5 (143-238)||(4430856-4430951)
chr5 (143-238)||(8267740-8267835)
chr5 (153-238)||(33620674-33620759)
chr5 (143-234)||(16437488-16437580)
chr5 (143-238)||(37700516-37700610)
chr5 (143-237)||(6930980-6931074)
chr5 (143-234)||(5821535-5821627)
chr5 (156-238)||(23126261-23126342)
chr5 (143-238)||(21064146-21064241)
chr5 (143-238)||(2224846-2224942)
chr5 (143-221)||(43441794-43441872)
chr5 (143-221)||(9581635-9581713)
chr5 (153-215)||(15267850-15267912)
chr5 (143-221)||(19839923-19840001)
chr5 (143-228)||(20770187-20770272)
chr5 (143-227)||(18397096-18397180)
chr5 (143-238)||(15952965-15953060)
chr5 (143-234)||(39628845-39628936)
chr5 (143-238)||(41175626-41175721)
chr5 (143-221)||(8675370-8675448)
chr5 (143-228)||(189633-189718)
chr5 (143-228)||(19481112-19481197)
chr5 (157-238)||(39088789-39088869)
chr5 (157-238)||(42267416-42267496)
chr5 (154-234)||(41724256-41724336)
chr5 (143-210)||(6517768-6517835)
chr5 (143-238)||(9226357-9226451)
chr5 (143-238)||(10649491-10649586)
chr5 (143-221)||(1839282-1839360)
chr5 (143-221)||(15478714-15478792)
chr5 (143-221)||(34124677-34124755)
chr5 (143-221)||(38704134-38704212)
chr5 (143-199)||(43196584-43196640)
chr5 (143-227)||(43213990-43214074)
chr5 (143-238)||(3640117-3640212)
chr5 (144-178)||(6292178-6292212)
chr5 (143-177)||(21136319-21136353)
chr5 (157-198)||(17402881-17402922)
[»] chr7 (54 HSPs)
chr7 (143-238)||(29162896-29162991)
chr7 (143-238)||(32815224-32815319)
chr7 (143-238)||(38779664-38779759)
chr7 (143-238)||(39231648-39231743)
chr7 (143-238)||(13162975-13163070)
chr7 (143-237)||(40353320-40353414)
chr7 (143-238)||(19785999-19786094)
chr7 (143-238)||(37808684-37808779)
chr7 (144-215)||(39332042-39332113)
chr7 (143-238)||(47078172-47078266)
chr7 (156-234)||(13906381-13906459)
chr7 (143-234)||(21023041-21023132)
chr7 (156-238)||(41402577-41402659)
chr7 (144-237)||(39137209-39137302)
chr7 (143-234)||(41666846-41666937)
chr7 (143-221)||(13729782-13729860)
chr7 (157-238)||(26041240-26041320)
chr7 (144-221)||(28036801-28036878)
chr7 (148-228)||(35588821-35588901)
chr7 (143-238)||(10055552-10055647)
chr7 (143-221)||(44184496-44184574)
chr7 (161-214)||(41026132-41026185)
chr7 (148-235)||(29002669-29002754)
chr7 (146-238)||(39823868-39823959)
chr7 (143-238)||(36019473-36019567)
chr7 (143-221)||(21822536-21822614)
chr7 (143-221)||(43573480-43573558)
chr7 (143-237)||(44495019-44495112)
chr7 (144-228)||(16980354-16980437)
chr7 (174-238)||(46773584-46773648)
chr7 (143-230)||(20482583-20482670)
chr7 (143-238)||(35452493-35452588)
chr7 (143-238)||(47495026-47495121)
chr7 (144-238)||(3062387-3062481)
chr7 (148-238)||(4713634-4713724)
chr7 (143-221)||(11352911-11352989)
chr7 (143-213)||(11564949-11565018)
chr7 (144-230)||(31844533-31844619)
chr7 (148-221)||(12645847-12645920)
chr7 (143-215)||(18111554-18111627)
chr7 (143-200)||(21559854-21559911)
chr7 (143-238)||(7817693-7817787)
chr7 (143-199)||(33180669-33180725)
chr7 (143-234)||(41399087-41399178)
chr7 (143-238)||(46532558-46532653)
chr7 (143-221)||(3343267-3343345)
chr7 (143-192)||(35600727-35600777)
chr7 (143-177)||(40231687-40231721)
chr7 (168-238)||(46148073-46148142)
chr7 (157-238)||(46829549-46829631)
chr7 (143-199)||(39029914-39029971)
chr7 (156-205)||(46653040-46653089)
chr7 (153-221)||(25067289-25067357)
chr7 (144-234)||(27163584-27163673)
[»] chr3 (58 HSPs)
chr3 (143-238)||(44677404-44677499)
chr3 (143-238)||(390865-390960)
chr3 (143-238)||(37508418-37508513)
chr3 (143-238)||(10206893-10206988)
chr3 (143-238)||(32767732-32767827)
chr3 (143-231)||(39020086-39020174)
chr3 (143-234)||(49363175-49363266)
chr3 (148-238)||(30909090-30909180)
chr3 (143-215)||(33375916-33375988)
chr3 (143-234)||(22371247-22371338)
chr3 (143-238)||(28419134-28419229)
chr3 (144-238)||(54195396-54195491)
chr3 (143-237)||(43905029-43905123)
chr3 (156-238)||(54773673-54773755)
chr3 (143-215)||(8821686-8821758)
chr3 (143-234)||(11633669-11633760)
chr3 (143-238)||(39671017-39671112)
chr3 (143-238)||(49417631-49417725)
chr3 (143-238)||(54027998-54028093)
chr3 (144-238)||(36121878-36121972)
chr3 (153-234)||(29633996-29634077)
chr3 (143-208)||(46984582-46984647)
chr3 (143-230)||(39907474-39907561)
chr3 (143-234)||(46982827-46982918)
chr3 (143-221)||(39697159-39697237)
chr3 (143-221)||(52937239-52937317)
chr3 (164-234)||(55013079-55013149)
chr3 (143-221)||(55400055-55400133)
chr3 (166-238)||(35201460-35201531)
chr3 (143-238)||(24095326-24095421)
chr3 (143-238)||(37927125-37927220)
chr3 (143-238)||(49761363-49761458)
chr3 (143-221)||(21196180-21196258)
chr3 (143-208)||(26996372-26996435)
chr3 (143-221)||(46253678-46253756)
chr3 (153-234)||(13934527-13934607)
chr3 (157-234)||(21195815-21195891)
chr3 (146-227)||(24480382-24480463)
chr3 (143-200)||(50638309-50638366)
chr3 (143-238)||(24645412-24645507)
chr3 (143-234)||(51973292-51973383)
chr3 (143-192)||(37035491-37035541)
chr3 (143-221)||(46019518-46019596)
chr3 (143-221)||(50206907-50206985)
chr3 (143-221)||(51465851-51465929)
chr3 (143-199)||(52485528-52485585)
chr3 (143-198)||(23770705-23770758)
chr3 (143-215)||(24482906-24482978)
chr3 (143-238)||(8846547-8846642)
chr3 (157-207)||(9753409-9753459)
chr3 (143-221)||(20080129-20080206)
chr3 (143-213)||(31376711-31376780)
chr3 (143-228)||(3953405-3953490)
chr3 (143-228)||(34057883-34057968)
chr3 (143-199)||(44813406-44813463)
chr3 (157-238)||(49167821-49167901)
chr3 (144-228)||(21005106-21005190)
chr3 (148-200)||(54694071-54694123)
[»] chr8 (49 HSPs)
chr8 (143-237)||(45529167-45529261)
chr8 (143-238)||(1633810-1633905)
chr8 (143-237)||(16966841-16966935)
chr8 (143-238)||(7955927-7956022)
chr8 (143-238)||(11017861-11017956)
chr8 (157-238)||(32843862-32843943)
chr8 (143-238)||(7478836-7478930)
chr8 (143-238)||(11657921-11658015)
chr8 (143-238)||(36110194-36110289)
chr8 (143-238)||(7586083-7586177)
chr8 (143-238)||(35564345-35564440)
chr8 (143-238)||(1871535-1871629)
chr8 (143-238)||(7592905-7593001)
chr8 (143-215)||(30135958-30136030)
chr8 (143-215)||(40739856-40739927)
chr8 (143-238)||(33589151-33589245)
chr8 (163-238)||(34591340-34591415)
chr8 (143-238)||(37783891-37783986)
chr8 (144-237)||(32847607-32847701)
chr8 (143-233)||(36531651-36531740)
chr8 (143-221)||(41159826-41159904)
chr8 (143-215)||(41521024-41521096)
chr8 (145-215)||(13971182-13971252)
chr8 (143-237)||(30439427-30439521)
chr8 (143-200)||(38234063-38234120)
chr8 (143-229)||(2733044-2733129)
chr8 (143-228)||(31597004-31597089)
chr8 (143-198)||(4994437-4994492)
chr8 (143-221)||(16872093-16872171)
chr8 (158-238)||(888176-888257)
chr8 (144-205)||(1366657-1366718)
chr8 (143-227)||(16327082-16327167)
chr8 (161-230)||(39543451-39543520)
chr8 (143-238)||(6968153-6968248)
chr8 (143-187)||(36568014-36568058)
chr8 (143-221)||(12707205-12707284)
chr8 (143-221)||(7472964-7473041)
chr8 (143-177)||(9549180-9549214)
chr8 (143-177)||(16613690-16613724)
chr8 (143-213)||(29991468-29991537)
chr8 (143-177)||(34718171-34718205)
chr8 (144-238)||(42110103-42110196)
chr8 (143-228)||(5277634-5277719)
chr8 (143-228)||(23793020-23793105)
chr8 (143-187)||(6991779-6991823)
chr8 (157-237)||(8645234-8645314)
chr8 (143-238)||(9208122-9208215)
chr8 (144-212)||(29028907-29028975)
chr8 (157-221)||(36424539-36424603)
[»] chr4 (65 HSPs)
chr4 (143-237)||(30079902-30079996)
chr4 (143-238)||(41486063-41486158)
chr4 (143-238)||(36111315-36111411)
chr4 (144-237)||(42959328-42959422)
chr4 (144-238)||(51746277-51746371)
chr4 (143-234)||(6141702-6141793)
chr4 (143-234)||(21260354-21260445)
chr4 (143-238)||(31076110-31076204)
chr4 (143-238)||(33899246-33899341)
chr4 (143-238)||(41082374-41082468)
chr4 (153-238)||(12112693-12112778)
chr4 (143-215)||(624255-624327)
chr4 (143-238)||(5932078-5932172)
chr4 (143-238)||(9118784-9118879)
chr4 (143-238)||(14451449-14451544)
chr4 (143-238)||(51194325-51194420)
chr4 (156-238)||(17475946-17476027)
chr4 (153-238)||(53152241-53152326)
chr4 (157-237)||(35820241-35820321)
chr4 (143-238)||(37066044-37066138)
chr4 (143-237)||(25317987-25318080)
chr4 (168-238)||(50272993-50273063)
chr4 (143-228)||(39344910-39344995)
chr4 (143-238)||(47965795-47965888)
chr4 (143-238)||(26206897-26206992)
chr4 (143-238)||(54669504-54669598)
chr4 (143-221)||(28657378-28657456)
chr4 (143-228)||(26718424-26718509)
chr4 (143-228)||(26731052-26731137)
chr4 (143-228)||(28458307-28458392)
chr4 (157-234)||(48536366-48536445)
chr4 (143-234)||(439184-439275)
chr4 (155-238)||(2256251-2256333)
chr4 (143-237)||(30169938-30170035)
chr4 (143-221)||(2999168-2999246)
chr4 (143-221)||(14010055-14010133)
chr4 (143-221)||(46405911-46405989)
chr4 (143-221)||(49896603-49896681)
chr4 (144-228)||(13263328-13263411)
chr4 (143-221)||(13086078-13086156)
chr4 (143-221)||(22819705-22819783)
chr4 (145-215)||(27326695-27326765)
chr4 (153-237)||(43326264-43326350)
chr4 (143-213)||(51573577-51573647)
chr4 (143-228)||(13139204-13139289)
chr4 (143-212)||(48335610-48335679)
chr4 (157-238)||(13389370-13389453)
chr4 (143-215)||(31657702-31657774)
chr4 (153-211)||(23822194-23822250)
chr4 (143-221)||(45143610-45143686)
chr4 (143-221)||(45152379-45152455)
chr4 (143-221)||(47099078-47099154)
chr4 (153-199)||(6494852-6494898)
chr4 (143-221)||(18882912-18882990)
chr4 (143-177)||(21617239-21617273)
chr4 (143-221)||(38338859-38338937)
chr4 (143-213)||(45851816-45851885)
chr4 (143-228)||(52846159-52846242)
chr4 (156-221)||(12138922-12138987)
chr4 (157-238)||(33860716-33860797)
chr4 (144-200)||(34995377-34995434)
chr4 (143-236)||(41389795-41389887)
chr4 (157-238)||(56271430-56271511)
chr4 (144-200)||(49768276-49768332)
chr4 (143-187)||(55601672-55601716)
[»] chr6 (30 HSPs)
chr6 (143-238)||(2075371-2075466)
chr6 (143-234)||(11547453-11547544)
chr6 (156-238)||(14986664-14986746)
chr6 (143-238)||(3610881-3610976)
chr6 (155-238)||(30036714-30036797)
chr6 (143-238)||(34504076-34504171)
chr6 (143-237)||(2777238-2777331)
chr6 (143-238)||(335119-335212)
chr6 (156-238)||(5327511-5327593)
chr6 (143-237)||(30152451-30152545)
chr6 (143-215)||(4820307-4820381)
chr6 (144-235)||(14693175-14693266)
chr6 (143-238)||(22341095-22341189)
chr6 (143-233)||(13658888-13658977)
chr6 (143-228)||(35213491-35213576)
chr6 (143-234)||(3199016-3199106)
chr6 (143-221)||(754375-754453)
chr6 (143-221)||(14699601-14699679)
chr6 (156-221)||(32459453-32459518)
chr6 (143-221)||(13143319-13143397)
chr6 (143-201)||(20822825-20822883)
chr6 (157-221)||(1369430-1369494)
chr6 (143-178)||(6531163-6531198)
chr6 (143-238)||(18141221-18141316)
chr6 (143-238)||(26832702-26832797)
chr6 (143-192)||(10335606-10335656)
chr6 (143-177)||(32046754-32046788)
chr6 (143-213)||(33421816-33421885)
chr6 (157-198)||(23628429-23628470)
chr6 (143-200)||(24842424-24842480)
[»] chr1 (69 HSPs)
chr1 (143-238)||(756912-757007)
chr1 (143-238)||(1852871-1852966)
chr1 (143-238)||(3024670-3024765)
chr1 (143-238)||(3603167-3603262)
chr1 (143-238)||(7128174-7128269)
chr1 (143-238)||(20565038-20565133)
chr1 (143-238)||(33024491-33024586)
chr1 (143-234)||(46082045-46082136)
chr1 (143-237)||(38303609-38303703)
chr1 (143-235)||(902694-902786)
chr1 (143-238)||(4514374-4514469)
chr1 (143-238)||(8411638-8411733)
chr1 (143-238)||(9008281-9008376)
chr1 (144-238)||(26585799-26585893)
chr1 (143-238)||(16986994-16987088)
chr1 (143-238)||(26837508-26837603)
chr1 (143-238)||(34008236-34008330)
chr1 (143-238)||(47214264-47214358)
chr1 (143-238)||(51286288-51286382)
chr1 (143-237)||(36673653-36673746)
chr1 (143-207)||(21486268-21486332)
chr1 (143-215)||(46172350-46172422)
chr1 (143-234)||(36779193-36779284)
chr1 (143-238)||(51191844-51191939)
chr1 (143-238)||(21340578-21340672)
chr1 (143-221)||(32319247-32319324)
chr1 (143-228)||(50781500-50781585)
chr1 (143-238)||(1790564-1790659)
chr1 (143-221)||(13489718-13489796)
chr1 (143-221)||(50328078-50328156)
chr1 (143-221)||(52362538-52362616)
chr1 (143-236)||(44632584-44632676)
chr1 (143-227)||(32915003-32915087)
chr1 (143-189)||(29586049-29586095)
chr1 (143-221)||(40316881-40316959)
chr1 (153-238)||(24673132-24673216)
chr1 (143-228)||(34254281-34254366)
chr1 (153-238)||(38713636-38713721)
chr1 (153-234)||(50882034-50882115)
chr1 (143-238)||(41507114-41507210)
chr1 (143-238)||(10889966-10890061)
chr1 (143-230)||(19969490-19969577)
chr1 (143-198)||(34040460-34040515)
chr1 (143-221)||(15015454-15015532)
chr1 (143-213)||(48220089-48220159)
chr1 (143-221)||(50824797-50824875)
chr1 (143-221)||(52714838-52714916)
chr1 (144-237)||(8447793-8447886)
chr1 (143-228)||(46543373-46543457)
chr1 (145-221)||(3225997-3226073)
chr1 (153-229)||(35539202-35539278)
chr1 (153-228)||(4469358-4469433)
chr1 (143-238)||(8200131-8200226)
chr1 (153-208)||(37178769-37178824)
chr1 (143-238)||(47721465-47721560)
chr1 (143-238)||(47728457-47728552)
chr1 (143-221)||(35136900-35136978)
chr1 (143-221)||(36577349-36577427)
chr1 (143-213)||(44789089-44789158)
chr1 (143-213)||(46911349-46911418)
chr1 (143-228)||(49241435-49241520)
chr1 (143-192)||(49660235-49660285)
chr1 (143-176)||(33054070-33054103)
chr1 (156-221)||(48326037-48326102)
chr1 (144-177)||(48624933-48624966)
chr1 (158-199)||(50242382-50242423)
chr1 (143-238)||(33358078-33358174)
chr1 (143-215)||(37588619-37588690)
chr1 (143-206)||(48261195-48261259)
[»] scaffold0471 (1 HSPs)
scaffold0471 (143-238)||(63-158)
[»] scaffold0449 (1 HSPs)
scaffold0449 (144-238)||(9260-9354)
[»] scaffold0687 (1 HSPs)
scaffold0687 (143-238)||(2253-2349)
[»] scaffold0136 (1 HSPs)
scaffold0136 (143-228)||(38481-38566)
[»] scaffold0014 (1 HSPs)
scaffold0014 (143-208)||(122887-122952)
[»] scaffold0532 (1 HSPs)
scaffold0532 (143-238)||(11020-11115)
[»] scaffold0321 (1 HSPs)
scaffold0321 (143-215)||(19692-19764)
[»] scaffold0010 (1 HSPs)
scaffold0010 (143-215)||(134246-134318)
[»] scaffold1956 (1 HSPs)
scaffold1956 (143-221)||(825-904)
[»] scaffold0416 (1 HSPs)
scaffold0416 (143-192)||(6914-6963)
[»] scaffold0204 (1 HSPs)
scaffold0204 (143-212)||(23132-23201)
[»] scaffold0141 (1 HSPs)
scaffold0141 (148-221)||(11993-12066)


Alignment Details
Target: chr2 (Bit Score: 105; Significance: 1e-52; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 41569585 - 41569469
Alignment:
Q  3 gaagtggactaa-tcattgttgtgtcatgtgtggcaaatattcattttgttgtacactactcttgatgatgatttttacacgtcaaaattaacaatgaat 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41569585 gaagtggactaaatcattgttgtgtcatgtgtggcaaatattcattttgttgtacactactcttgatgatgatttttacacgtgaaaattaacaatgaat 41569486  T
Q  102 ttaattaaggtccattt 118  Q
    |||||||||||||||||    
T  41569485 ttaattaaggtccattt 41569469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 18176996 - 18177091
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||| | |||  |||||||||||||||    
T  18176996 catactcacattatttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaaataagttg 18177091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 41569411 - 41569317
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | |||  ||||||||||||||    
T  41569411 catactcacgttactttttactttatctctctattgctatggtttccgtaccaataccacttttttctttgtaaaatatggttgtcaaataagtt 41569317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 433906 - 434001
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| | ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||| | |||  |||||||||||||||    
T  433906 catactcacatcattttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttg 434001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 29051668 - 29051576
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    |||||| || ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||| | |||  ||||||||||||||    
T  29051668 catacttacattattttttacttt--ctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagtt 29051576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 37257508 - 37257578
Alignment:
Q  145 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||    
T  37257508 tactcacattattttttactttatctctctattgctatggtttccatgacaataccacttttttctttgta 37257578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 4952495 - 4952404
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||||| | ||||||||||||| | |||| || ||||||||    
T  4952495 catattcacattattttttactttatctctctattgctatggttttcgtgccaatacaatttttttctttgtaaaatatatttatcaaataa 4952404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 42223967 - 42223876
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||| ||| |||||| ||||||| ||||||  ||||||||||||| |||||||||||||||||||||| | ||||||||| ||||||    
T  42223967 catactcacattaatttttattttatctttctattgttatggtttccgtgtcaataccacttttttctttgtaaaatataattgttaaataa 42223876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 42678805 - 42678884
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-acttttttctttgtatattat 221  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||| |||||| ||||||||||||||| |||||    
T  42678805 catactcacattattttttactttatctctctattgctttggtttccgtgcaaatacctacttttttctttgtaaattat 42678884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 7552625 - 7552704
Alignment:
Q  157 tttttactttatctctctattactatggt--ttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||| ||||||||||| | ||| ||||||||||||    
T  7552625 tttttattttatctctctattactatggtgtttccgtgccaataccactattttctttgtaaaatatgattgtcaaataa 7552704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 4758654 - 4758563
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    |||| |||| |||||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||| || | ||| ||| ||||||||    
T  4758654 catattcacattattttttattttatctctctattgctatgatttccgtgccaatatcacttttttctttataaagtatgattatcaaataa 4758563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 26738895 - 26738801
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||| || |||||||||| |||||||||||||| |||||||||| |||||||||  || |||||||||||| | ||| ||||||||||||||||    
T  26738895 catacttacattattttttattttatctctctattgctatggtttctgtgccaatattac-tttttctttgtaaaatatgattgtcaaataagttg 26738801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 31389603 - 31389698
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||| ||||||| || |||||  ||||||||||||| |||||| |||||||||||||||  ||||  |||||||||||||||    
T  31389603 catactcacattatttttaactttatttccctattgttatggtttccgtgacaatactacttttttctttgtaagttatggttgtcaaataagttg 31389698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 5200228 - 5200146
Alignment:
Q  155 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||||||||||| | |||| ||||| ||||||||||||||| || |||||||||||| |||||  |||||||||||||||    
T  5200228 attttttactttatctttttattgctatgatttccgtgccaatactac-tttttctttgtaaattatggttgtcaaataagttg 5200146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 670466 - 670392
Alignment:
Q  164 tttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||||||||| ||||| |||||||| |||||||| ||||||||||||| | |||  |||||||||||||||    
T  670466 tttatctctctattgctatgatttccgtgtcaataccatttttttctttgtaaaatatggttgtcaaataagttg 670392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 6999083 - 6999005
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||||||| || |||||    
T  6999083 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaattat 6999005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 29879899 - 29879992
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    |||||||| |||||||| ||||||||||||||||  |||||||| |||| |||||| ||||||| |||| ||  ||||  ||||||||||||||    
T  29879899 atactcacattatttttaactttatctctctattgttatggtttacgtgtcaatactactttttcctttataagttatggttgtcaaataagtt 29879992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 2464254 - 2464171
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    |||||||| |||||||||||||||| ||||| |||||||| |||||| || ||||||||||||  ||||  ||||||||||||||    
T  2464254 ttatttttaactttatctctctattgctatg-tttccgtgtcaatactacctttttctttgtaagttatggttgtcaaataagtt 2464171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 7574491 - 7574575
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgt 227  Q
    |||||||||  ||||||||||||||||||||||||||| || ||| ||||| ||||||  ||||||| ||||| |||||| ||||    
T  7574491 catactcacaatattttttactttatctctctattactttgattttcgtgcaaatacctattttttccttgtaaattatagttgt 7574575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 10711780 - 10711864
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgt 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||  ||||||  ||||||||||||| ||||| |||||    
T  10711780 catactcacattactttttactttatctctctattgctttggttttcgtgtaaatacctattttttctttgtaaattatgattgt 10711864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 32869892 - 32869960
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||||||||||||||||||| |||| || |||||| ||||| ||||||| ||||||||||||| |||||    
T  32869892 ttattttttactttatctctttattgctttggttttcgtgcaaataccaattttttctttgtaaattat 32869960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 39213785 - 39213713
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||||| ||||||||||||||||||||||||| || | |||| ||||| |||||||  ||||||||||||    
T  39213785 catactcacattattttttactttatctctctattcctttagttttcgtgcaaataccaactttttctttgta 39213713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 35705550 - 35705640
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||| |||| ||||||||||||||| |||| ||||||||| |||| |||||| || |||||||||||| |||||  |||| ||||||    
T  35705550 catactcacattatattttactttatctctttattgctatggttttcgtgtcaatactac-tttttctttgtaaattatggttgttaaataa 35705640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 40937079 - 40936988
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| ||||||   |||||||||||| |||||  |||||| ||||    
T  40937079 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaaattatggttgtcacataa 40936988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 5027233 - 5027303
Alignment:
Q  164 tttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    |||||||||||||| ||||||||| ||||||||||| | ||||||||||||| | |||| || ||||||||    
T  5027233 tttatctctctattgctatggttttcgtgccaatacaatttttttctttgtaaaatatatttatcaaataa 5027303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 6170686 - 6170764
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||| ||| || |||||    
T  6170686 catactcacgttactttttactttatctctctattgctttggttttcgtgcaaataccaattttttttttataaattat 6170764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 17779475 - 17779533
Alignment:
Q  180 tatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||||||| |||||||||||||||||||||| | |||  |||||||||||||||    
T  17779475 tatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttg 17779533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 4753231 - 4753311
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||| |||||||||||||| ||||| |||||||| |||||| || ||||||||| || |||||  |||||||||||||||    
T  4753231 tttttattttatctctctattgctatgatttccgtgtcaatactac-tttttctttataaattatggttgtcaaataagttg 4753311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 6941011 - 6941089
Alignment:
Q  155 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    |||||||||||||||||| ||||  |||||||||||||||||||| |||||||     ||| ||||| |||||||||||||||    
T  6941011 attttttactttatctctttattgttatggtttccgtgccaatactactttttc----gtaaattatgattgtcaaataagtt 6941089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 28245784 - 28245841
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 200  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||||| ||||||    
T  28245784 catactcacattattttttactttatctctctattgctttggttttcgtgcaaatacc 28245841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 28679387 - 28679467
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||||||||||||||| ||||| ||||| || |||||| || ||||||||| || |||||  |||||||||||||||    
T  28679387 tttttactttatctctctattgctatgatttccatgtcaatactac-tttttctttataaattatggttgtcaaataagttg 28679467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 41588576 - 41588523
Alignment:
Q  4 aagtggactaatcattgttgtgtcatgtgtggcaaatattcattttgttgtaca 57  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||| ||||||    
T  41588576 aagtggactaacctttgttgtgtcatgtgtggcaaagattcattttggtgtaca 41588523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 44712004 - 44711919
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    |||||||||  |||||||||||||||||||||||| || || ||| ||||| ||||||  || ||||||| || ||||||||||||    
T  44712004 catactcacactattttttactttatctctctattgctttgattttcgtgcaaatacctattctttctttataaattataattgtc 44711919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 42866806 - 42866901
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaata-ccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||||||| || || | | ||||| |||| |||| |||||||||||| ||||| |||||||  |||||||    
T  42866806 catactcacattattttttactttatctctctattgctttgatcttcgtgcaaatatccac-tttttctttgtaaattatgattgtcacgtaagttg 42866901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 2221049 - 2221144
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||| |||||||||||||||| || || ||||||||| ||||||   ||||||||| || |||||  || ||| ||||||||    
T  2221049 catactcacattatttttcactttatctctctattgctttgatttccgtgcaaatacctactttttctttataaattatggttatcacataagttg 2221144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 5054664 - 5054759
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||| | |||||||||||||||||| || || ||| ||||| ||||||   |||||||||||| |||||  |||||| ||||||||    
T  5054664 catactcacattatgtgttactttatctctctattgctttgattttcgtgcaaatacctactttttctttgtaaattattgttgtcacataagttg 5054759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 20911870 - 20911929
Alignment:
Q  156 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    |||||||||||||||||||||| || |||||||||||| |||| |  |||||||||||||    
T  20911870 ttttttactttatctctctattgctttggtttccgtgcaaatatctattttttctttgta 20911929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 28244245 - 28244171
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||||||||||||||||||| || || ||| |||| |||||||  ||||||||||| | ||||||||||||    
T  28244245 ttattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttgcaaattataattgtc 28244171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 9634451 - 9634373
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| ||||| |||||||  |||||||||||| |||||    
T  9634451 catactcacattactttttactttatctctatattgttttggttttcgtgcaaataccaactttttctttgtaaattat 9634373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 18876923 - 18876841
Alignment:
Q  156 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||||||||||||||||| || |||||||||||| ||||||   ||||||||| || |||||  |||||| | ||||||    
T  18876923 ttttttactttatctctctattgctttggtttccgtgcaaatacctactttttctttataaattatggttgtcacacaagttg 18876841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 25881600 - 25881678
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| |||||||||||||||||||||| || || |||||| |||   ||||||  ||||||||||||| |||||    
T  25881600 catactcacattattttttactttatctctctgttgctttggttttcgtataaatacctattttttctttgtaaattat 25881678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 35589402 - 35589324
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| |||| ||  |||||||||||| |||||    
T  35589402 catactcacattactttttactttatctctctattgttttggttttcgtgcaaatatcaactttttctttgtaaattat 35589324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 36802952 - 36802989
Alignment:
Q  143 catactcactttattttttactttatctctctattact 180  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  36802952 catactcacattattttttactttatctctctattact 36802989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 42532754 - 42532697
Alignment:
Q  143 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 199  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| |||||||||||    
T  42532754 catactcacattatatttttactttatctctctattactttgattttcgtgccaatac 42532697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 9377512 - 9377607
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||| ||||| |||| |   |||||||||||| ||||| | ||||  ||||||||    
T  9377512 catattcacattactttttactttatctctctattgctttggttttcgtgcaaatatctactttttctttgtaaattatgactgtctcataagttg 9377607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 13347830 - 13347751
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-acttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| | |||| |||| ||| |||||| |||||    
T  13347830 catactcacattactttttactttatctctctattgctttggttttcgtgcaattaccaacttatttttttgtaaattat 13347751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 26277152 - 26277199
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgt 191  Q
    |||||||| ||||||||||||||||||||||||| || | ||||||||    
T  26277152 atactcacattattttttactttatctctctattgctttagtttccgt 26277199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 4139322 - 4139272
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgc 193  Q
    ||||||||| ||| ||||||| |||||||||||||||| |||||| |||||    
T  4139322 catactcacattaatttttaccttatctctctattactttggttttcgtgc 4139272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 15269917 - 15269995
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||| |||| ||| ||||||||||||||||||||| || || ||| ||||| ||||||   |||||||||||| |||||    
T  15269917 catattcacattactttttactttatctctctattgctttgattttcgtgcaaatacctactttttctttgtaaattat 15269995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 29712034 - 29712112
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || ||||||   ||| ||||||   |||||||||||| |||||    
T  29712034 catactcacattactttttactttatctctctattgctttggtttttatgcaaatacctactttttctttgtaaattat 29712112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Complemental strand, 34119667 - 34119633
Alignment:
Q  143 catactcactttattttttactttatctctctatt 177  Q
    ||||||||| |||||||||||||||||||||||||    
T  34119667 catactcacattattttttactttatctctctatt 34119633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 38560734 - 38560768
Alignment:
Q  143 catactcactttattttttactttatctctctatt 177  Q
    ||||||||| |||||||||||||||||||||||||    
T  38560734 catactcacattattttttactttatctctctatt 38560768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 42372535 - 42372593
Alignment:
Q  143 catactcactttatttt-ttactttatctctctattactatggtttccgtgccaatacc 200  Q
    ||||||||| ||||||| |||||||||||||||||| || || ||||||||| ||||||    
T  42372535 catactcacattatttttttactttatctctctattcctttgatttccgtgcaaatacc 42372593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 18723650 - 18723707
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 200  Q
    ||||||||| |||||||||||||||||||| |||| || || ||| ||||| ||||||    
T  18723650 catactcacattattttttactttatctctttattgctttgattttcgtgcaaatacc 18723707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 39449323 - 39449392
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 212  Q
    ||||||||  ||| ||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||    
T  39449323 catactcagattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttcttt 39449392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 13711368 - 13711332
Alignment:
Q  156 ttttttactttatctctctattactatggtttccgtg 192  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  13711368 ttttttactttctctctctattactttggtttccgtg 13711332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 17999680 - 17999636
Alignment:
Q  155 attttttactttatctctctattactatggtttccgtgccaatac 199  Q
    |||||||| ||||||||||||||||| || ||| |||||||||||    
T  17999680 attttttattttatctctctattactttgattttcgtgccaatac 17999636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 23352920 - 23352827
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||  ||||||| || |||||| ||||| |||||    |||||||||||| |||||  |||||  ||||||||    
T  23352920 catactcacattattttttactttat--ctctattgctttggttttcgtgcaaatacatactttttctttgtaaattatggttgtcccataagttg 23352827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 40700251 - 40700307
Alignment:
Q  143 catactcactttat-tttttactttatctctctattactatggtttccgtgccaata 198  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| |||| |||||    
T  40700251 catactcacattatatttttactttatctctctattactttgattttcgtgtcaata 40700307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 5042304 - 5042398
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||  ||||||||||||||    
T  5042304 catactcacattattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagtt 5042398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 35099020 - 35098925
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||    
T  35099020 catactcacattattttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaaattatgattgtcaaataagttg 35098925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 2688991 - 2688910
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||| |||||||||||    
T  2688991 ttattttttactttatctctctattgctatggtttccgtgccaatacaacttttttctttgtaaaatatagttgtcaaataa 2688910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 18842336 - 18842264
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  18842336 catactcacattattttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgta 18842264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 4430951 - 4430856
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||| | |||  |||||||||||||||    
T  4430951 catactcacatcattttttactttatctctctattgctatggttttcgtgtcaataccacttttttctttgtaaagtatgcttgtcaaataagttg 4430856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 8267835 - 8267740
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||||||||| |  || ||||||||||||||||    
T  8267835 catactcacattattttttactttatctctccattgttatggtttccgtgtcaataccacttttttctttgtaaagcatgattgtcaaataagttg 8267740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 33620674 - 33620759
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||  |||| ||||||||||    
T  33620674 ttattttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgttaaataagttg 33620759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 16437580 - 16437488
Alignment:
Q  143 catactcactttatttttt-actttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||| ||||||||| || |||||||||||||  |||||||||||||||||||||||||||||||||||| | ||| ||||||||||||    
T  16437580 catactcacattatttttttaccttatctctctattcatatggtttccgtgccaataccacttttttctttgtaaagtatgattgtcaaataa 16437488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 37700516 - 37700610
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||| |||||  |||||||||| ||||    
T  37700516 catactcacattattttttaccttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattatggttgtcaaataggttg 37700610  T

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Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 6931074 - 6930980
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||| | ||| ||||| | |||||||    
T  6931074 catactcacattattttttactttatctctctattgctatgatttccgtgtcaataccacttttttcttcgtaaaatatgattgttagataagtt 6930980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 5821627 - 5821535
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactt-ttttctttgtatattataattgtcaaataa 234  Q
    |||||| || ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||| | ||| ||| ||||||||    
T  5821627 catacttacattattttttactttatctctctatagctatggtttccgtgccaataccactttttttctttgtaaagtatgattatcaaataa 5821535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 23126342 - 23126261
Alignment:
Q  156 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||| |||||||||||||  ||||||||||||||||| | |||||||||||||||| | ||||||||||||||||||||    
T  23126342 ttttttacgttatctctctattgttatggtttccgtgccaa-atcacttttttctttgtaaagtataattgtcaaataagttg 23126261  T

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Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 21064241 - 21064146
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| ||||||||||||||| |||||  |||| |||||||| |||||||||||||||||||||| | |||   ||||||||||||||    
T  21064241 catactcacattactttttactttatctccctattgttatgatttccgtgtcaataccacttttttctttgtaaaatatgggtgtcaaataagttg 21064146  T

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Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 2224846 - 2224942
Alignment:
Q  143 catactcactttattttt--tactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||| || ||||||||  |||||||||||| |||||||||| ||||||||||||||| || |||||||||||| |||||  |||||||||||||||    
T  2224846 catacttacattatttttcgtactttatctctttattactatgttttccgtgccaatactac-tttttctttgtaaattatggttgtcaaataagttg 2224942  T

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Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 43441794 - 43441872
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| ||||||||||||| |||||    
T  43441794 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaaattat 43441872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 9581635 - 9581713
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||||| ||||||   |||||||||||| |||||    
T  9581635 catactcacattattttttactttatctctctattgttttggtttccgtgcaaatacctactttttctttgtaaattat 9581713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 15267850 - 15267912
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    |||||||||||||||||||||||||  |||||||| |||| ||||| ||||||||||||||||    
T  15267850 ttattttttactttatctctctattgttatggttttcgtgtcaatatcacttttttctttgta 15267912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 19840001 - 19839923
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| |||||||||||||||| |||||||| || |||||| ||||| |||| || ||||||||||||| |||||    
T  19840001 catactcacattattttttactttatatctctattgctttggttttcgtgcaaatatcaattttttctttgtaaattat 19839923  T

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Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 20770187 - 20770272
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||| |||||||   |||||||||||| ||||| ||||||    
T  20770187 catactcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaaattatgattgtc 20770272  T

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Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 18397180 - 18397096
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgt 227  Q
    |||||| || ||| |||||| |||||||||||||| || |||||| ||||| ||||||  ||||||||||||| |||||||||||    
T  18397180 catacttacattactttttattttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaattataattgt 18397096  T

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Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 15953060 - 15952965
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||  ||||||||||||||||||||||||| || || ||| ||||| ||||||   |||||||||||| |||||  |||||| ||||||||    
T  15953060 catactcatattattttttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaaattatggttgtcacataagttg 15952965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 39628845 - 39628936
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    |||| |||| |||||||| ||||||||| ||||||  ||||||||  |||||||||| | |||||||||| || ||||| ||||||||||||    
T  39628845 catattcacattatttttaactttatctttctattgttatggtttttgtgccaatactatttttttctttataaattatgattgtcaaataa 39628936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 41175721 - 41175626
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||||||| || || | | ||||| ||||||   |||||||||||| |||||  |||||| ||||||||    
T  41175721 catactcacattattttttactttatctctctattgctttgatcttcgtgcaaatacccactttttctttgtaaattatggttgtcacataagttg 41175626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 8675448 - 8675370
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||| |||||    
T  8675448 catactcacattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattat 8675370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 189718 - 189633
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||| ||  ||||||||| || ||||| ||||||    
T  189718 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatatcaactttttctttataaattatgattgtc 189633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 19481197 - 19481112
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| ||| |||||||||||||||||||||  | |||| | ||||| |||||||  |||||||||||| |||||| |||||    
T  19481197 catactcacattactttttactttatctctctattgttttggtcttcgtgcaaataccaactttttctttgtaaattatagttgtc 19481112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 39088869 - 39088789
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||||||||||||||||  |||||||||| || |||||||  ||||||||||||| | |||  |||||||||||||||    
T  39088869 tttttactttatctctctattgatatggtttccatgtcaatacc-tttttttctttgtaaaatatcgttgtcaaataagttg 39088789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 42267416 - 42267496
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||||||||||||||||  |||| |||||||| |||||| | |||||||||| || |||||  |||||||||||||||    
T  42267416 tttttactttatctctctattgttatgatttccgtgtcaatacta-ttttttctttataaattatggttgtcaaataagttg 42267496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 41724256 - 41724336
Alignment:
Q  154 tattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||||||||| ||||||||| | |||||||||||  ||||||  ||||||||||||| ||||| ||| ||| ||||    
T  41724256 tattttttactttatttctctattattttggtttccgtgtaaatacctattttttctttgtaaattatgattatcacataa 41724336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 6517768 - 6517835
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttct 210  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||    
T  6517768 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttct 6517835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 9226357 - 9226451
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||| |||||||||||||||||  | || ||||||||| |||||    |||||||||||| ||||||||||||| | ||||||    
T  9226357 catactcacattatttt-tactttatctctctattgttttgatttccgtgcaaatacttactttttctttgtaaattataattgtcacaaaagttg 9226451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 10649491 - 10649586
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| |||||  ||||||  |||||||||||| |||||  |||||| | ||||||    
T  10649491 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaactttttctttgtaaattatggttgtcacaaaagttg 10649586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 1839360 - 1839282
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| |||||||||||||||||| ||||||  | |||||| ||||| |||| |  ||||||||||||| |||||    
T  1839360 catactcacattattttttactttatctttctattgttttggttttcgtgcaaatatctattttttctttgtaaattat 1839282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 15478714 - 15478792
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||||||||||||||||||||| |||  | |||||| ||||| |||| ||  |||||||||||| |||||    
T  15478714 catactcacattattttttactttatctctcaattgttttggttttcgtgcaaatatcaactttttctttgtaaattat 15478792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 34124677 - 34124755
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| |||||||||||| |||||||| || |||||| ||||  |||||||  |||||||||||| |||||    
T  34124677 catactcacattactttttactttatttctctattgctttggttttcgtgtaaataccaactttttctttgtaaattat 34124755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 38704212 - 38704134
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| |||||||||||||||| | |||||| || || ||| ||||| |||||||  |||||||||||| |||||    
T  38704212 catactcacattattttttactttatttttctattgctttgattttcgtgcaaataccaactttttctttgtaaattat 38704134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 43196640 - 43196584
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaatac 199  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| |||||    
T  43196640 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatac 43196584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 43214074 - 43213990
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgt 227  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| ||||| ||||||  |||||||||| || |||||| ||||    
T  43214074 catactcacattactttttactttatctctttattgttttggttttcgtgcaaatacctattttttctttataaattatagttgt 43213990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 3640212 - 3640117
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||||||||||||| |||||| || || ||| | ||| ||||||   ||||||||| || |||||  |||||| ||||||||    
T  3640212 catactcacattattttttactttatctttctattgctttgattttcatgcaaatacccactttttctttataaattatggttgtcacataagttg 3640117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 6292178 - 6292212
Alignment:
Q  144 atactcactttattttttactttatctctctatta 178  Q
    |||||||| ||||||||||||||||||||||||||    
T  6292178 atactcacattattttttactttatctctctatta 6292212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 21136319 - 21136353
Alignment:
Q  143 catactcactttattttttactttatctctctatt 177  Q
    ||||||||| |||||||||||||||||||||||||    
T  21136319 catactcacgttattttttactttatctctctatt 21136353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 17402922 - 17402881
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaata 198  Q
    ||||||||||||||||||||| ||||| |||||||| |||||    
T  17402922 tttttactttatctctctattgctatgatttccgtgtcaata 17402881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 29162991 - 29162896
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  29162991 catactcacattactttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaaataagttg 29162896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 32815224 - 32815319
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| | |||  |||||||||||||||    
T  32815224 catactcacattattttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 32815319  T

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Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 38779759 - 38779664
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  38779759 catactcacattattttttacttcatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 38779664  T

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Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 39231743 - 39231648
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| | |||  |||||||||||||||    
T  39231743 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacctttttctttgtaaagtatggttgtcaaataagttg 39231648  T

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Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 13162975 - 13163070
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||  ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  13162975 catactcatattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 13163070  T

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Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 40353320 - 40353414
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||  || |||||||||||    
T  40353320 catactcacattattttttattttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttttcaaataagtt 40353414  T

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Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 19786094 - 19785999
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  19786094 catactcacattactttttactttatctctctattgctctggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 19785999  T

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Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 37808779 - 37808684
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||| || |||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||| | |||  |||||||||| ||||    
T  37808779 catacttacattattttttactttatctctctattgttatgctttccgtgccaataccacttttttctttgtaaaatatggttgtcaaatacgttg 37808684  T

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Target: chr7; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 39332042 - 39332113
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    |||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  39332042 atactcacattactttttactttatctctctattgctatgatttccgtgccaataccacttttttctttgta 39332113  T

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Target: chr7; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 47078266 - 47078172
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  || |||||||||||| ||| |  |||||||||||||||    
T  47078266 catactcacattattttttactttatctctctattgctatggtttccgtgccaatattac-tttttctttgtaaattttggttgtcaaataagttg 47078172  T

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Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 13906459 - 13906381
Alignment:
Q  156 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| | |||  |||||||||||    
T  13906459 ttttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataa 13906381  T

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Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 21023132 - 21023041
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    |||| |||| |||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||| | |||  |||||||||||    
T  21023132 catattcacattattttttactttatctctctattgttatggtttccgtgataataccacttttttctttgtaaaatatggttgtcaaataa 21023041  T

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Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 41402577 - 41402659
Alignment:
Q  156 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||| | |||  |||| ||||||||||    
T  41402577 tttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgttaaataagttg 41402659  T

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Target: chr7; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 39137209 - 39137302
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    |||||||| |||||||| ||||||||||| |||| ||||||||||||| ||||||  |||||||||||||||  ||||  ||||||||||||||    
T  39137209 atactcacattatttttaactttatctctatattgctatggtttccgtaccaatattacttttttctttgtaagttatggttgtcaaataagtt 39137302  T

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Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 41666937 - 41666846
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||| ||| |||||||||||||||||||||  |||||| ||||||||||||  ||||||||||||||| | |||  |||||||||||    
T  41666937 catactcacattactttttactttatctctctattgttatggtgtccgtgccaatattacttttttctttgtaaaatatggttgtcaaataa 41666846  T

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Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 13729782 - 13729860
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||||||||||||||||||||||||| |  |||||| ||||| ||||||| ||||||||||||| |||||    
T  13729782 catactcacattattttttactttatctctctattgcgttggttttcgtgcaaataccaattttttctttgtaaattat 13729860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 26041320 - 26041240
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| || |||||||||||| |||||  |||||||||||||||    
T  26041320 tttttactttatctctctatttctatgatttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagttg 26041240  T

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Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 28036801 - 28036878
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||||||| ||||||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||| |||||    
T  28036801 atactcacattattttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattat 28036878  T

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Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 35588901 - 35588821
Alignment:
Q  148 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||| ||||||||||||    
T  35588901 tcacattattttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattataattgtc 35588821  T

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Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 10055647 - 10055552
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||  || | |||||||  |||||||||||| |||||| |||||  ||||||||    
T  10055647 catactcacattattttttactttatctctctattgctttggtttttgtacaaataccaactttttctttgtaaattatagttgtcccataagttg 10055552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 44184574 - 44184496
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||  ||||||||||||| |||||    
T  44184574 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaattat 44184496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 41026132 - 41026185
Alignment:
Q  161 tactttatctctctattactatggtttccgtgccaataccacttttttctttgt 214  Q
    |||||| |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  41026132 tactttgtctctctattgctatggtttccgtaccaataccacttttttctttgt 41026185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 29002669 - 29002754
Alignment:
Q  148 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataag 235  Q
    |||| ||| ||||||||||||||||  | |  |||||||||||||||||||| ||||||||||||||| | |||| ||||||||||||    
T  29002669 tcacattactttttactttatctct--actgttatggtttccgtgccaatacaacttttttctttgtaaaatatagttgtcaaataag 29002754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 39823868 - 39823959
Alignment:
Q  146 actcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||| |||||||||||||||||| ||||||  |||  |||||||| |||||| || |||||||||||| |||||  |||||||||||||||    
T  39823868 actcacattattttttactttatctttctattgttataatttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagttg 39823959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 36019473 - 36019567
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||| |||||||||||| |||| |||||||||| ||| |||||||    ||||||||||| |||||  |||||||||||||||    
T  36019473 catactcacattatttt-tactttatctctatattgctatggtttctgtgtcaatacctaccttttctttgtaaattatggttgtcaaataagttg 36019567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 21822614 - 21822536
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||| | ||| |||||||||||||||||||||||| || ||| ||||  ||||||| ||||||||||||| |||||    
T  21822614 catactcgcattactttttactttatctctctattactttgattttcgtgtaaataccaattttttctttgtaaattat 21822536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 43573558 - 43573480
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||||||| || |||||    
T  43573558 catattcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaattat 43573480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 44495112 - 44495019
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||| |||||||| ||||||| |||||||| ||||||||||  ||||||||| | ||||| |||| || |||||  ||||||||||||||    
T  44495112 catactcacattatttttcactttatttctctattgctatggtttcaatgccaatactaattttt-ctttataaattatggttgtcaaataagtt 44495019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 16980354 - 16980437
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    |||||||| ||| ||||||||||||||||||| | || |||||| || || ||||||| ||||||||||||| ||||| ||||||    
T  16980354 atactcacattactttttactttatctctcta-tgctttggttttcgggcaaataccaattttttctttgtaaattatgattgtc 16980437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 46773648 - 46773584
Alignment:
Q  174 tattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||| ||||||||||||||||||||||| |||||||||| || | |||  |||||||||||||||    
T  46773648 tattgctatggtttccgtgccaataccaattttttctttataaaatatggttgtcaaataagttg 46773584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 230
Target Start/End: Original strand, 20482583 - 20482670
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaa 230  Q
    |||||||||||||||||||||||||||||||||||  | ||||||  || | ||||||  ||||||| ||||| |||||  |||||||    
T  20482583 catactcactttattttttactttatctctctattgttttggtttatgtacaaatacctattttttccttgtaaattatggttgtcaa 20482670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 35452588 - 35452493
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| | ||||||||||||||||||||||| || || ||||||||| ||||||   ||||||||| || |||||  |||||| | ||||||    
T  35452588 catactcacataattttttactttatctctctattgctttgatttccgtgcaaataccttctttttctttataaattatggttgtcacacaagttg 35452493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 47495026 - 47495121
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||||||||||||||||||||  | |  |||| |||| ||||||  | |||| |||||| ||||||||| ||| ||||||||    
T  47495026 catactcacattattttttactttatctctctattgttttaatttctgtgcaaatacctatcttttatttgtaaattataattatcatataagttg 47495121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 3062387 - 3062481
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||| ||| |||||||||||||||||||||  | ||||||  |||| ||||||  ||||||||||||| |||||  ||||||  |||||||    
T  3062387 atactcacattactttttactttatctctctattgttttggtttttgtgcaaatacctattttttctttgtaaattatggttgtcatgtaagttg 3062481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 4713634 - 4713724
Alignment:
Q  148 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||| |||||||||||||||||||||||||    |||||||| ||| ||||||   |||||||||||| |||||  |||||| ||||||||    
T  4713634 tcacattattttttactttatctctctattgtgttggtttccatgcaaataccttatttttctttgtaaattatggttgtcacataagttg 4713724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 11352989 - 11352911
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| |||||||||||||||| |||| || |||||| ||||  |||||||  |||||||||||| |||||    
T  11352989 catactcacattactttttactttatctctttattgctttggttttcgtgtaaataccaaatttttctttgtaaattat 11352911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 11564949 - 11565018
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 213  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  11564949 catactcacattattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 11565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 31844619 - 31844533
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaa 230  Q
    |||||||| |||||||||||||||||||||||||  | ||||||  || | ||||||   |||||||||||| |||||| |||||||    
T  31844619 atactcacattattttttactttatctctctattgttttggtttttgtacaaatacctactttttctttgtaaattatagttgtcaa 31844533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 12645920 - 12645847
Alignment:
Q  148 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||| |||| ||  |||||||||||| |||||    
T  12645920 tcacattattttttactttatctctctattgctttgattttcgtgcaaatatcaactttttctttgtaaattat 12645847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 18111627 - 18111554
Alignment:
Q  143 catactcactttat-tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| | ||||||| ||  |||||||||||||    
T  18111627 catactcacattatatttttactttatctctctattactttgattttcttgccaatgcctattttttctttgta 18111554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 21559854 - 21559911
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 200  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| ||||||    
T  21559854 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatacc 21559911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 7817693 - 7817787
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaata-ccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||| ||||||||||||||||| || || ||| ||||| |||| |||| |||||||||||| |||||  |||||| ||||||||    
T  7817693 catactcacattatttt-tactttatctctctattgctttgattttcgtgcaaatatccac-tttttctttgtaaattatggttgtcacataagttg 7817787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 33180725 - 33180669
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaatac 199  Q
    ||||||||| |||||||||||||||||||||||||  | |||||| ||||| |||||    
T  33180725 catactcacattattttttactttatctctctattgttttggttttcgtgcaaatac 33180669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 41399178 - 41399087
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||  |||||||||||||||||||||||||  | |||||| ||||  |||||   ||||||||||||| ||| |  |||||||||||    
T  41399178 catactcatattattttttactttatctctctattgttttggttttcgtgtaaatacttattttttctttgtaaattttggttgtcaaataa 41399087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 46532558 - 46532653
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||||||||||||||||||||  | |||||| ||||  ||||||   ||||||||| || |||||  |||||| | ||||||    
T  46532558 catactcacattattttttactttatctctctattgttttggttttcgtgtaaatacctaatttttctttataaattatggttgtcacaaaagttg 46532653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 3343345 - 3343267
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||| ||||| ||| |||  ||||||||| || |||||    
T  3343345 catattcacattactttttactttatctctctattgctttggttttcgtgcaaatcccaactttttctttataaattat 3343267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 35600727 - 35600777
Alignment:
Q  143 catactcactttatttt-ttactttatctctctattactatggtttccgtg 192  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||||||||    
T  35600727 catactcacattatttttttactttttctctctattactttggtttccgtg 35600777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Complemental strand, 40231721 - 40231687
Alignment:
Q  143 catactcactttattttttactttatctctctatt 177  Q
    ||||||||| |||||||||||||||||||||||||    
T  40231721 catactcacattattttttactttatctctctatt 40231687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 46148073 - 46148142
Alignment:
Q  168 tctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||||  |||| ||||||||||||||| | |||||||||| || |||||  |||||||||||||||    
T  46148073 tctctctattgttatgatttccgtgccaatacta-ttttttctttataaattatggttgtcaaataagttg 46148142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 46829549 - 46829631
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtata-ttataattgtcaaataagttg 238  Q
    ||||||||||||||||||||| || || ||| |||||||| |||   |||||||||||| | ||||  |||||||||||||||    
T  46829549 tttttactttatctctctattgctttgattttcgtgccaaaacctactttttctttgtaaatttatggttgtcaaataagttg 46829631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 39029914 - 39029971
Alignment:
Q  143 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 199  Q
    ||||||||| |||| |||||| ||||||||||||||||| |||||| | |||||||||    
T  39029914 catactcacattatgtttttaatttatctctctattactttggttttcatgccaatac 39029971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 46653089 - 46653040
Alignment:
Q  156 ttttttactttatctctctattactatggtttccgtgccaataccacttt 205  Q
    ||||||| ||||||||| |||| |||||||||||||| |||||| |||||    
T  46653089 ttttttattttatctctttattgctatggtttccgtgtcaatactacttt 46653040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 25067289 - 25067357
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||||||||||||||||||||||||  | |||||| | ||| |||||   ||||||||||||| |||||    
T  25067289 ttattttttactttatctctctattgttttggttttcatgcaaatacattttttttctttgtaaattat 25067357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 27163673 - 27163584
Alignment:
Q  144 atactcactttatttttt-actttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    |||||||| ||||||||| |||||||||||  | | ||||  ||||| ||||||||||| ||||||||||||| | |||  |||||||||||    
T  27163673 atactcacattatttttttactttatctct--actgctattatttccatgccaataccatttttttctttgtaaaatatggttgtcaaataa 27163584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 44677499 - 44677404
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  44677499 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 44677404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 390865 - 390960
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||| | ||| ||||||||||||||||    
T  390865 catactcacattattttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaataagttg 390960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 37508513 - 37508418
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  37508513 catactcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 37508418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 10206988 - 10206893
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  10206988 catactcacattactttttactttatctctctgttgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 10206893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 32767732 - 32767827
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||| | |||  |||||||||||||||    
T  32767732 catactcacattattttttactttatctctctattgctatggtttccgtgtcaatgccacttttttctttgtaaagtatggttgtcaaataagttg 32767827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 39020174 - 39020086
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaa 231  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | ||| |||||||||    
T  39020174 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaa 39020086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 49363266 - 49363175
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| || | |||| |||||||||||    
T  49363266 catactcacattactttttactttatctctctattgatatggtttccgtgccaataccacttttttctttataaaatatagttgtcaaataa 49363175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 30909090 - 30909180
Alignment:
Q  148 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||| ||| |||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  30909090 tcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatgattgtcaaataagttg 30909180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 33375916 - 33375988
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||    
T  33375916 catactcacattattttttactttatctctctattgctatagtttccgtgccaataccacttttatctttgta 33375988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 22371247 - 22371338
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||  ||||||||||| ||||||||||||| | ||| ||||||||||||    
T  22371247 catacttacattattttttactttatctctctattgctatggtttctttgccaataccaattttttctttgtagagtatgattgtcaaataa 22371338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 28419229 - 28419134
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||| || |||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||| | |||  ||||||| |||||||    
T  28419229 catacttacattattttttactttatctctctattgttatggtttccatgccaataccacttttttctttgtaaaatatggttgtcaagtaagttg 28419134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 54195396 - 54195491
Alignment:
Q  144 atactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||| |||||  |||||||||||||||    
T  54195396 atactcacattatttttttactttatctctctattactatagttttcgtgtcaatatcacttttttctttgtaaattatggttgtcaaataagttg 54195491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 43905029 - 43905123
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||| ||| |||||||||||||||||||||  ||||||||| ||| |||||||||||||||||||||| | |||  ||||||||||||||    
T  43905029 catactcacattactttttactttatctctctattgttatggtttctgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagtt 43905123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 54773755 - 54773673
Alignment:
Q  156 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||| | |||  |||||||||||||||    
T  54773755 ttttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttg 54773673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 8821686 - 8821758
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||    
T  8821686 catactcacattattttttactttatctctctattgctatggtttctgtgtcaatatcacttttttctttgta 8821758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 11633669 - 11633760
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    |||| |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| | |||  |||||||||||    
T  11633669 catattcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttctttttgtaaaatatggttgtcaaataa 11633760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 39671112 - 39671017
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| |||||||||||||||||||||  |||| |||||||| ||||| |||||||||||||||| | |||  |||||||||||||||    
T  39671112 catactcacattactttttactttatctctctattgttatgatttccgtgtcaatatcacttttttctttgtaaaatatggttgtcaaataagttg 39671017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 49417631 - 49417725
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||| ||| |  |||| ||||||||||    
T  49417631 catactcacattattttttattttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattttggttgttaaataagttg 49417725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 54027998 - 54028093
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||| || |||||||||||||||||||||||||  |||| |||||||| |||||||||||||||||||||| | |||  ||||| |||||||||    
T  54027998 catacttacattattttttactttatctctctattgttatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtccaataagttg 54028093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 36121878 - 36121972
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||| ||| ||||||||||||||||||||| ||||| |||  ||||||||||||| |||||||||||| | |||  |||||||||||||||    
T  36121878 atactcacgttactttttactttatctctctattgctatgatttttgtgccaataccacatttttctttgtaaaatatggttgtcaaataagttg 36121972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 29634077 - 29633996
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||||| |||||||||||||  |||| ||||||||| ||||||||||||||||||||| | |||  |||||||||||    
T  29634077 ttattttttacattatctctctattgatatgatttccgtgcaaataccacttttttctttgtaaaatatggttgtcaaataa 29633996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 46984647 - 46984582
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactttttt 208  Q
    ||||||||  ||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  46984647 catactcatattattttctactttatctctctattgttatggtttccgtgccaataccactttttt 46984582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 230
Target Start/End: Complemental strand, 39907561 - 39907474
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaa 230  Q
    ||||||||| |||||||||||||||| |||||||| ||||| |||||||| ||| || |||||||| |||||| |||||  |||||||    
T  39907561 catactcacattattttttactttatttctctattgctatgatttccgtgtcaacactacttttttttttgtaaattatggttgtcaa 39907474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 46982918 - 46982827
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||  ||| ||| |||||||| |||||||| ||||  ||||||||| ||||||||||||||||||||| | |||| |||||||||||    
T  46982918 catactcatattactttctactttatatctctattgctattatttccgtgctaataccacttttttctttgtaaaatatagttgtcaaataa 46982827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 39697237 - 39697159
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||| || ||||||||||||| |||||    
T  39697237 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatatcaattttttctttgtaaattat 39697159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 52937239 - 52937317
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||  |||| ||||||| ||||||||||||| |||||    
T  52937239 catactcacattactttttactttatctctctattactttgatttttgtgcaaataccaattttttctttgtaaattat 52937317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 55013079 - 55013149
Alignment:
Q  164 tttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||| |||| |||||||||||||| ||||| |||||||||||||||| | ||| ||||||||||||    
T  55013079 tttatctctttattgctatggtttccgtgtcaatatcacttttttctttgtaaaatatgattgtcaaataa 55013149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 55400055 - 55400133
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||||||| || |||||    
T  55400055 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaattat 55400133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 35201531 - 35201460
Alignment:
Q  166 tatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||||||| ||||||||| |||| |||||| ||||||| ||||||| ||||| ||||||||||||||||    
T  35201531 tatctctctattgctatggttttcgtgtcaatactacttttt-ctttgtaaattatgattgtcaaataagttg 35201460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 24095421 - 24095326
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||||||||||| |||||||| || |||||| ||||| ||||||   |||||||||||| |||||  |||||| | ||||||    
T  24095421 catactcacattattttttactttatttctctattgctttggttttcgtgcaaatacctactttttctttgtaaattatggttgtcataaaagttg 24095326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 37927220 - 37927125
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||||| | ||||||  |||||||||| || |||||  |||||| | ||||||    
T  37927220 catactcacataattttttactttatctctctattgctttggtttccgtacaaatacctattttttctttataaattatggttgtcacacaagttg 37927125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 49761363 - 49761458
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||  |||| ||||||   ||||||||| || ||||| |||||||  |||||||    
T  49761363 catactcacattattttttactttatctctctattgctttggtttttgtgcaaatacctactttttctttataaattatgattgtcatgtaagttg 49761458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 21196180 - 21196258
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||||| || |||||||||||||||||||||||||||| || ||| ||||| |||||   ||||||||||||| |||||    
T  21196180 catacttacattattttttactttatctctctattactttgattttcgtgcaaatacatattttttctttgtaaattat 21196258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 26996372 - 26996435
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactttttt 208  Q
    ||||||||| ||||||||||||||||||||  ||| |||||||||||||| |||||||| ||||||    
T  26996372 catactcacattattttttactttatctct--attgctatggtttccgtgtcaataccattttttt 26996435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 46253678 - 46253756
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||   ||||||||||| |||||    
T  46253678 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaacattttctttgtaaattat 46253756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 13934607 - 13934527
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||  || |||||||||||| |||||  || ||||||||    
T  13934607 ttattttttactttatttctctattgttatggtttccgtgccaataatac-tttttctttgtaaattatggttatcaaataa 13934527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 21195891 - 21195815
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| || |||| |||| || |||||| |||||||||||    
T  21195891 tttttactttatctctctattgctatgatttccgtgtcaatactac-ttttcctttataaattatagttgtcaaataa 21195815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 24480463 - 24480382
Alignment:
Q  146 actcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgt 227  Q
    |||||| |||||||||||||||||| ||||||||| ||||||  |||| ||||||   |||||||||||| ||||| |||||    
T  24480463 actcacattattttttactttatctatctattactttggtttttgtgcaaatacctactttttctttgtaaattatgattgt 24480382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 50638366 - 50638309
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 200  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||||||| ||||||    
T  50638366 catactcacataattttttactttatctctctattgctttggtttccgtgcaaatacc 50638309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 24645412 - 24645507
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| | ||||  ||||||||||||| |||||  |||||| | ||||||    
T  24645412 catactcacattactttttactttatctctctattgttttggttttcgtgcaagtacctattttttctttgtaaattatggttgtcataaaagttg 24645507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 51973383 - 51973292
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    |||||| || |||||||| ||||||||||||||||  ||||||||   || |||||| | ||||||||||||| |||||  |||||||||||    
T  51973383 catacttacattatttttaactttatctctctattgttatggtttttatgtcaatactatttttttctttgtaaattatggttgtcaaataa 51973292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 37035541 - 37035491
Alignment:
Q  143 catactcactttatttttt-actttatctctctattactatggtttccgtg 192  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  37035541 catactcacattatttttttactttatctctctattactttggtttccgtg 37035491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 46019518 - 46019596
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||| | ||||||  | ||||||||||| |||||    
T  46019518 catactcacattactttttactttatctctctattgctttggttttcgtacaaatacctatcttttctttgtaaattat 46019596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 50206985 - 50206907
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| |||| ||  |||||||||||| |||||    
T  50206985 catactcacattactttttactttatctctctattgttttggttttcgtgcaaatatcaactttttctttgtaaattat 50206907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 51465929 - 51465851
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||  ||| ||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||| |||||    
T  51465929 catactcatattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattat 51465851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 52485528 - 52485585
Alignment:
Q  143 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 199  Q
    ||||||||| |||| ||||||||||||||||||||| || |||||| |||||||||||    
T  52485528 catactcacattatatttttactttatctctctattgctttggttttcgtgccaatac 52485585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 23770758 - 23770705
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaata 198  Q
    ||||||||||||  |||||||||| ||||||||||||| ||||||||||| |||||    
T  23770758 catactcacttt--tttttactttctctctctattactttggtttccgtgtcaata 23770705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 24482978 - 24482906
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| ||||| |||||||  ||||||||||||    
T  24482978 catactcacattactttttactttatctctatattgttttggttttcgtgcaaataccaactttttctttgta 24482906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 8846547 - 8846642
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||| |||  | ||||||| || | |||||   |||||||||| || ||||| ||| ||| ||||||||    
T  8846547 catactcacattattttttactttatctctccattgttttggtttctgtacaaatacttattttttctttataaattatgattatcatataagttg 8846642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 9753409 - 9753459
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttt 207  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||| ||||    
T  9753409 tttttactttatctctctattactttggtttttgtgtcaataccacatttt 9753459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 20080129 - 20080206
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||| ||||||   ||||||||| || |||||    
T  20080129 catactcacattatttt-tactttatctctctattgttttggtttccgtgcaaatacctactttttctttataaattat 20080206  T

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Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 31376780 - 31376711
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 213  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  31376780 catactcacataattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 31376711  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 3953490 - 3953405
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| ||| |||||||| |||||||||||| || |||||| | ||| |||| ||  ||||||||| || ||||| ||||||    
T  3953490 catactcacattactttttactctatctctctattgctttggttttcatgcaaatatcaactttttctttataaattatgattgtc 3953405  T

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Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 34057968 - 34057883
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| ||| |||||||||||||| |||||| || || ||| ||||| | |||||  ||||||||| || |||||| |||||    
T  34057968 catactcacgttactttttactttatctttctattgctttgtttttcgtgcaattaccaactttttctttataaattatagttgtc 34057883  T

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Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 44813463 - 44813406
Alignment:
Q  143 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 199  Q
    ||||||||| |||| ||||||||||||||||||||| || |||||| |||| ||||||    
T  44813463 catactcacattatatttttactttatctctctattgctttggttttcgtgtcaatac 44813406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 49167821 - 49167901
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||||||||||||||| ||||| ||||| |  |||||| || ||||||||| || |||||  || ||||||||||||    
T  49167821 tttttactttatctctctattgctatgatttccatatcaatactac-tttttctttataaattatggttatcaaataagttg 49167901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 21005190 - 21005106
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    |||||||| ||| ||||||||||||||||| ||| || | |||| ||||| |||| ||  ||||||||| || ||||| ||||||    
T  21005190 atactcacgttactttttactttatctctcaattgctttagttttcgtgcaaatatcaactttttctttataaattatgattgtc 21005106  T

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Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 54694123 - 54694071
Alignment:
Q  148 tcactttattttttactttatctctctattactatggtttccgtgccaatacc 200  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||| ||||||    
T  54694123 tcacgttattttttactttatctctctattgctttgattttcgtgcaaatacc 54694071  T

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Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 45529261 - 45529167
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||  ||||||||||||||    
T  45529261 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagtt 45529167  T

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Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 1633905 - 1633810
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| | |||  |||||||||||||||    
T  1633905 catactcacattattttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 1633810  T

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Target: chr8; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 16966841 - 16966935
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||  ||||||||||||||    
T  16966841 catactcacattattttctactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagtt 16966935  T

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Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 7956022 - 7955927
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | |||  |||||||||||||||    
T  7956022 catactcacattactttttactttatctctctattgctatggtttccgcgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 7955927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 11017861 - 11017956
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||||||||||||||||||||  ||| |||||| ||||||||||||||||||||||||| | |||| |||||||||||||||    
T  11017861 catactcacattattttttactttatctctctattgttatcgtttccatgccaataccacttttttctttgtaaaatatagttgtcaaataagttg 11017956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 32843943 - 32843862
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  32843943 tttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 32843862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 7478836 - 7478930
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||| ||||| ||||||||||| ||||    
T  7478836 catactcacattattttttaccttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattatgattgtcaaataggttg 7478930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 11658015 - 11657921
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||    
T  11658015 catactcacattactttttattttatctctctattattatggtttccgtgccaa-accacttttttctttgtaaaatatgattgtcaaataagttg 11657921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 36110194 - 36110289
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  36110194 catactcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 36110289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 7586177 - 7586083
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||||||||||||||||||||  |||| ||||||||||||| | || |||||||||||| |||||| |||||||||||||||    
T  7586177 catactcacattattttttactttatctctctattgatatgttttccgtgccaatgctac-tttttctttgtaaattatagttgtcaaataagttg 7586083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 35564345 - 35564440
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||||||||||||| |||||| ||||  |||| |||||||||||||||||||||||||| | |||  |||||||||||||||    
T  35564345 catactcacattattttttactttatctatctattgctataatttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 35564440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 1871629 - 1871535
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||| ||||||||||||||||  |||||||||||||| ||||| || |||||||||||| |||||  |||||||||||||||    
T  1871629 catactcacattatttttcactttatctctctattgttatggtttccgtgcgaatacaac-tttttctttgtaaattatggttgtcaaataagttg 1871535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 7592905 - 7593001
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactt-ttttctttgtatattataattgtcaaataagttg 238  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||| |||||||| || |||| ||| || | ||| ||||||||||||||||    
T  7592905 catagtcacattattttttactttatctctctattgctatggtttccgtgtcaataccatttattttttttataaagtatgattgtcaaataagttg 7593001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 30136030 - 30135958
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    |||| |||| ||| |||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||    
T  30136030 catattcacattactttttactttatctctttattactatggtttccgtgtcaataccacttctttctttgta 30135958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 40739927 - 40739856
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    |||| |||| |||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  40739927 catattcacattattttttactttatctctctattgttatggtttccgtgccaatacca-ttttttctttgta 40739856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 33589245 - 33589151
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||| |||  ||||||||||||||||||| || |||||| |||||| | ||  ||||||||||||||||    
T  33589245 catactcacattattttttactttatctctccattgttatggtttccgtgccaatatca-ttttttttttgtaaagtacgattgtcaaataagttg 33589151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 34591340 - 34591415
Alignment:
Q  163 ctttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||||||||| | |||  |||||||||||||||    
T  34591340 ctttatctctttattgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttg 34591415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 37783986 - 37783891
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||  ||| ||||||||||||||||||||| ||| | |||||||| ||||||||| |||||||||||| | |||  |||||||||||||||    
T  37783986 catactcagattactttttactttatctctctattgctaggatttccgtgtcaataccacctttttctttgtaaaatatggttgtcaaataagttg 37783891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 32847701 - 32847607
Alignment:
Q  144 atactcactttatttttt-actttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    |||||||| ||||||||| ||||||| ||||||||  | ||||||||||| |||||||||||||||||||||| | |||  ||||||||||||||    
T  32847701 atactcacattatttttttactttatttctctattgttgtggtttccgtggcaataccacttttttctttgtaaagtatggttgtcaaataagtt 32847607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 36531651 - 36531740
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaata 233  Q
    ||||||||  |||||||||||||||||||||||||  |||| ||||||||||||||| || |||||||||||| ||| | |||||||||||    
T  36531651 catactcatattattttttactttatctctctattgttatgatttccgtgccaatactac-tttttctttgtaaattttgattgtcaaata 36531740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 41159904 - 41159826
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||||| ||||||  ||||||||||||| |||||    
T  41159904 catactcacattattttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaattat 41159826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 41521024 - 41521096
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||||| |||||||||||||||||||  |||| |||||||||| ||| |||||||||| |||||||||||    
T  41521024 catactcacattattttttactttatctcgttattgctatggtttctgtgtcaataccactattttctttgta 41521096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 13971182 - 13971252
Alignment:
Q  145 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||| ||| |||  ||||||||||| |||| ||||||||||||||||||||| |||||||||||||||    
T  13971182 tactcacattagtttgaactttatctctatattgctatggtttccgtgccaatactacttttttctttgta 13971252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 30439521 - 30439427
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| |||||   ||||||||||||| |||||  |||||| |||||||    
T  30439521 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatactcattttttctttgtaaattatggttgtcacataagtt 30439427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 38234063 - 38234120
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 200  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||||||| ||||||    
T  38234063 catactcacataattttttactttatctctctattactttggtttccgtgcaaatacc 38234120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 2733044 - 2733129
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtca 229  Q
    ||||||||| ||||||| |||||||||||||||||| | |||||||||||| ||||||   ||||||||| || ||||| |||||||    
T  2733044 catactcacattatttt-tactttatctctctattattttggtttccgtgcaaatacctactttttctttataaattatgattgtca 2733129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 31597004 - 31597089
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| ||| |||||||||||||||||||||  | ||||||  |||| |||||||  |||||||||||| ||||| ||||||    
T  31597004 catactcacattactttttactttatctctctattgttttggtttttgtgcaaataccaactttttctttgtaaattatgattgtc 31597089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 4994437 - 4994492
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaata 198  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||||| ||||    
T  4994437 catactcacattattttttactttatctctctattgatttggtttccgtgcaaata 4994492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 16872171 - 16872093
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| |||| ||  |||||||||||| |||||    
T  16872171 catactcacattactttttactttatctctctattgctttgattttcgtgcaaatatcaactttttctttgtaaattat 16872093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 888257 - 888176
Alignment:
Q  158 ttttactttatctctctattactatggtttccgtgccaataccacttttttctttgt-atattataattgtcaaataagttg 238  Q
    ||||| ||||||||||||||||| |||||| |||| ||||| |  |||||||||| | | |||||| |||||||||||||||    
T  888257 ttttattttatctctctattactttggttttcgtgtcaatatctattttttctttataaaattatagttgtcaaataagttg 888176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 1366657 - 1366718
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttt 205  Q
    |||||||  |||||||||||||||||||| |||| ||||| |||||||  ||||||||||||    
T  1366657 atactcaaattattttttactttatctctttattgctatgatttccgtatcaataccacttt 1366718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 16327167 - 16327082
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaatac-cacttttttctttgtatattataattgt 227  Q
    ||||||||| ||| |||||||||||||||||||||| | |||||| | ||| ||||| |  ||||||||||||| |||||| ||||    
T  16327167 catactcacattactttttactttatctctctattattttggttttcttgcaaatacactattttttctttgtaaattatagttgt 16327082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 39543520 - 39543451
Alignment:
Q  161 tactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaa 230  Q
    ||||||||||||||||| || || ||||||||| |||||   ||||||||||||| ||||| ||||||||    
T  39543520 tactttatctctctattgctttgttttccgtgcaaatacttattttttctttgtaaattatgattgtcaa 39543451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 6968248 - 6968153
Alignment:
Q  143 catactcacttta-ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| ||||||||||||||| ||||||  ||||||||||||  |||||| |||||||| |||||| |||||  |||| || |||||||    
T  6968248 catactcacattacttttttactttatctgtctattgttatggtttccgtatcaatactactttttt-tttgtaaattatggttgtaaattaagttg 6968153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 36568014 - 36568058
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggttt 187  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||    
T  36568014 catactcacattattttttactttatctctctattgctttggttt 36568058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 12707205 - 12707284
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-acttttttctttgtatattat 221  Q
    ||||||||| ||| |||||| ||||||||||||||  | |||||| ||||  |||||| ||||||||||||||| |||||    
T  12707205 catactcacgttactttttaatttatctctctattgttttggttttcgtgtaaataccaacttttttctttgtaaattat 12707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 7473041 - 7472964
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || | |||| ||||| ||||||   |||||||||||| |||||    
T  7473041 catactcacattactttttactttatctctctattgctttagttttcgtgcaaatacc-tatttttctttgtaaattat 7472964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Complemental strand, 9549214 - 9549180
Alignment:
Q  143 catactcactttattttttactttatctctctatt 177  Q
    ||||||||| |||||||||||||||||||||||||    
T  9549214 catactcacattattttttactttatctctctatt 9549180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 16613690 - 16613724
Alignment:
Q  143 catactcactttattttttactttatctctctatt 177  Q
    ||||||||| |||||||||||||||||||||||||    
T  16613690 catactcacattattttttactttatctctctatt 16613724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 29991468 - 29991537
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 213  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  29991468 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 29991537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 34718171 - 34718205
Alignment:
Q  143 catactcactttattttttactttatctctctatt 177  Q
    ||||||||| |||||||||||||||||||||||||    
T  34718171 catactcacattattttttactttatctctctatt 34718205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 42110196 - 42110103
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||||| |||||||||||||| ||||||||  | |||||||| | | ||||| |  |||||||||||| ||||| || |||| ||||||||    
T  42110196 atactcactt-attttttactttatttctctattgttttggtttccatacaaatactaactttttctttgtaaattatgatcgtcacataagttg 42110103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 5277719 - 5277634
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| |||||||||| |||||||||||||| || || ||| ||||| |||||   || |||||||| | ||||| ||||||    
T  5277719 catactcacattattttttattttatctctctattgctttgattttcgtgcaaatacatattctttctttgcaaattatcattgtc 5277634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 23793105 - 23793020
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| |||||||||||||||||| |||||| |  ||| ||  |||| |||| || || |||||||||| |||||| |||||    
T  23793105 catactcacattattttttactttatctttctattgcgttggattttgtgcaaataacaattctttctttgtaaattatagttgtc 23793020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 6991823 - 6991779
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggttt 187  Q
    ||||||||| |||||||||||||||||||||| || || ||||||    
T  6991823 catactcacattattttttactttatctctcttttgctttggttt 6991779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 8645234 - 8645314
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    |||||||||||||||||||||  | |||||||| ||| |||||   ||||||||||||| | ||| ||| ||| |||||||    
T  8645234 tttttactttatctctctattgttttggtttccatgcaaatacttattttttctttgtaaaatatgattatcacataagtt 8645314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 9208122 - 9208215
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||   ||||||||||||||  | |||||| ||||| ||||||   ||||||||| ||||||||| |||||| | ||||||    
T  9208122 catactcacattattttta--tttatctctctattgttttggtttacgtgcaaatacctactttttctttatatattatagttgtcacaaaagttg 9208215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 29028975 - 29028907
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 212  Q
    |||||||| |||||||||| |||||||||||||| || || |||  |||| ||||||  ||||||||||    
T  29028975 atactcacattattttttaatttatctctctattgctttgatttttgtgcaaatacctattttttcttt 29028907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 36424603 - 36424539
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||||||||||||||||||||  | |||||||||||| |||||   |||||||||| || |||||    
T  36424603 tttttactttatctctctattgttttggtttccgtgcaaatacatattttttctttataaattat 36424539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 30079902 - 30079996
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  30079902 catactcacattattttttactttatctctctattgctatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaaataagtt 30079996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 41486158 - 41486063
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  41486158 catactcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 41486063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 36111411 - 36111315
Alignment:
Q  143 catactcacttta-ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  36111411 catactcacattacttttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 36111315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 42959328 - 42959422
Alignment:
Q  144 atactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||    
T  42959328 atactcacattatttttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaataagtt 42959422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 51746277 - 51746371
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||| | |||  |||||||||||||||    
T  51746277 atactcacattattttttactttatctctctattgttatggtttccgtgccaatatcacttttttctttgtaaaatatgtttgtcaaataagttg 51746371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 6141793 - 6141702
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||| ||| | |||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  6141793 catactcacattactctttactttatctctttattgctatgatttccgtgccaataccacttttttctttgtaaaatataattgtcaaataa 6141702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 21260354 - 21260445
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||| ||||||||| |||||||||||||||  ||||||||||||||||||||||| |||||||||||| | ||| ||||||||||||    
T  21260354 catactcacattatttttttctttatctctctattgttatggtttccgtgccaataccacctttttctttgtaaaatatgattgtcaaataa 21260445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 31076110 - 31076204
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||| |||||  |||||||||||||||    
T  31076110 catactcacatcattttttactttatctctctattactatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagttg 31076204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 33899341 - 33899246
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||| |||||||||||||||  |||||||||||||||||||||| ||||||||||||| | |||  |||||||||||||||    
T  33899341 catactcacattatttttttctttatctctctattgttatggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttg 33899246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 41082374 - 41082468
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||| |||| |||||| || |||||||||||| ||||||||||||||||||||||    
T  41082374 catactcacattatttttcactttatctctctattactatgattttcgtgtcaatactac-tttttctttgtaaattataattgtcaaataagttg 41082468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 12112693 - 12112778
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||| | |||  |||||||||||||||    
T  12112693 ttattttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttg 12112778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 624327 - 624255
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  624327 catactcacattactttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgta 624255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 5932172 - 5932078
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||| ||||||||||||| | |||  |||||||||||||||    
T  5932172 catactcacattatttttt-ctttatctttctattgctatggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttg 5932078  T

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Target: chr4; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 9118879 - 9118784
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||| |||| ||||||||||||||||||||||||| ||||| ||| ||||||||||||| ||||||||||||| | |||  |||||||||||||||    
T  9118879 cataatcacattattttttactttatctctctattgctatgattttcgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttg 9118784  T

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Target: chr4; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 14451449 - 14451544
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||| | |||  |||||||||||||||    
T  14451449 catactcacattagtttttactttatctctctattgttatggttttcgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagttg 14451544  T

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Target: chr4; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 51194325 - 51194420
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| | | |||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  51194325 catactcacatcactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 51194420  T

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Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 17475946 - 17476027
Alignment:
Q  156 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||| ||||| ||||||||||||||||    
T  17475946 ttttttactttatctctctattgctatggtttccgtgtcaatactac-tttttctttgtaaattatgattgtcaaataagttg 17476027  T

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Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 53152326 - 53152241
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||| | |||  |||||||||||||||    
T  53152326 ttattttttactttatctctatattgttatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 53152241  T

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Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 35820241 - 35820321
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    |||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||| | |||| ||||||||||||||    
T  35820241 tttttactttttctctctattattatgatttccgtaccaataccacttttttctttgtaaactatagttgtcaaataagtt 35820321  T

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Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 37066044 - 37066138
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||| || |||||||| ||| ||| | ||||||||||||||||    
T  37066044 catactcacattattttttactttatctctccattgctatgatttccgtgccaatactac-tttttcttagtaaattttgattgtcaaataagttg 37066138  T

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Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 25318080 - 25317987
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||  |||||||||||||||||||| |||| || ||||||||||| |||||||||||||||||||||| | |||  ||||||||||||||    
T  25318080 catactcatattattttttactttatctctttattgct-tggtttccgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagtt 25317987  T

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Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 50273063 - 50272993
Alignment:
Q  168 tctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  50273063 tctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 50272993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 39344995 - 39344910
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| ||||||||||||| ||||| ||||||    
T  39344995 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaaattatgattgtc 39344910  T

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Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 47965795 - 47965888
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| ||||||||||||||||  |||  |||||||| ||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  47965795 catactcacattactttttactttatctct--attgatatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 47965888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 26206992 - 26206897
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||| |||| ||| |||||||||||||||||||||  ||||||||| ||| || ||||||||||||||||||| | |||  |||||||||||||||    
T  26206992 catattcacattactttttactttatctctctattgttatggtttctgtgtcagtaccacttttttctttgtaaaatatggttgtcaaataagttg 26206897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 54669598 - 54669504
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||| || |||||||| |||||||||||||||| ||| |||||||||| |||||| || |||||||||||| |||||  |||||||||||||||    
T  54669598 catacttacattatttttcactttatctctctattgctacggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagttg 54669504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 28657456 - 28657378
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||| ||||||    ||||||||||| |||||    
T  28657456 catactcacattattttttactttatctctctattgctttggtttccgtgcaaatacctacgttttctttgtaaattat 28657378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 26718424 - 26718509
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||  |||| |||||||  |||||||||||| ||||| ||||||    
T  26718424 catactcacattactttttactttatctctctattactttgttttttgtgcaaataccaactttttctttgtaaattatgattgtc 26718509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 26731052 - 26731137
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||  |||| |||||||  |||||||||||| ||||| ||||||    
T  26731052 catactcacattactttttactttatctctctattactttgttttttgtgcaaataccaactttttctttgtaaattatgattgtc 26731137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 28458392 - 28458307
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||| |||||||   |||||||||||| ||||| ||||||    
T  28458392 catactcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaaattatgattgtc 28458307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 48536366 - 48536445
Alignment:
Q  157 tttttactttatctc--tctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    |||||||||||||||  ||||||| ||||||||||||| |||||| | ||||||||||||| | ||| ||||||||||||    
T  48536366 tttttactttatctctctctattattatggtttccgtgtcaatactatttttttctttgtacaatatgattgtcaaataa 48536445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 439275 - 439184
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||| ||| |||||||||||| || ||||| ||||| ||||| | | ||||||||||||||||||||| | |||  |||||||||||    
T  439275 catactcacattagtttttactttatttccctattgctatgatttccatacaaataccacttttttctttgtaaaatatggttgtcaaataa 439184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 2256333 - 2256251
Alignment:
Q  155 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||||||||||||||||| ||||| |||||||  |||||| || ||||| |||||| ||||| ||||| ||||||||||    
T  2256333 attttttactttatctctctattgctatgatttccgtttcaatactac-tttttgtttgtaaattatgattgtaaaataagttg 2256251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 30170035 - 30169938
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccac---ttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| | | ||||||| ||   |||||| |||||| ||| |  ||||||||||||||    
T  30170035 catactcacattattttttactttatctctctattgctatggttttcataccaatactactctttttttttttgtaaattttggttgtcaaataagtt 30169938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 2999168 - 2999246
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||| |||| ||||||||||||||||||||||||| || |||||| | ||| |||||||  |||||||||||| |||||    
T  2999168 catattcacattattttttactttatctctctattgctttggttttcatgcaaataccaactttttctttgtaaattat 2999246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 14010133 - 14010055
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||  ||| |||||||||||||||||||||| | |||||| ||||| ||||||| |||||||||| || |||||    
T  14010133 catactcatattactttttactttatctctctattattttggttttcgtgcaaataccaattttttctttataaattat 14010055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 46405989 - 46405911
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||| |||||    
T  46405989 catactcacattaatttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattat 46405911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 49896681 - 49896603
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| |||| ||||||||  |||||||||||| |||||    
T  49896681 catagtcacattattttttactttatctctctattgctttgattttcgtgtcaataccaactttttctttgtaaattat 49896603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 13263411 - 13263328
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    |||||||||||||||||||||||||||||||||| || || ||| |||| ||||| |  ||||||||||| | ||||| ||||||    
T  13263411 atactcactttattttttactttatctctctattgctttgattttcgtg-caatatctattttttctttgcaaattatgattgtc 13263328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 13086078 - 13086156
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| |||||| |||||||||||||| || || ||| ||||| |||||||  |||||||||||| |||||    
T  13086078 catactcacattactttttattttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattat 13086156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 22819705 - 22819783
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| |||||||||||||||| |||| || || ||| ||||| |||||||  |||||||||||| |||||    
T  22819705 catactcacattactttttactttatctctttattgctttgattttcgtgcaaataccaactttttctttgtaaattat 22819783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 27326765 - 27326695
Alignment:
Q  145 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||| ||| |||||||||||| |||||||| || |||||| ||||| |||||||  ||||||||||||    
T  27326765 tactcacattactttttactttatttctctattgctttggttttcgtgcaaataccaactttttctttgta 27326695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 43326350 - 43326264
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaat-accac-ttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||||||||||||||||||| ||||  ||||| |  |||| || || |||||| |||||| |||||||||||||||||||||    
T  43326350 ttattttttactttatctctctattgctataatttccatatcaataactactttttttttttgtaaattataattgtcaaataagtt 43326264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 51573647 - 51573577
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 213  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||| | ||||||  |||||||||||    
T  51573647 catactcacattattttttactttatctctctattgctttgattttcgtacaaatacctattttttctttg 51573577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 13139204 - 13139289
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| |||  ||||| ||||||||||||||  | |||||| ||||| |||||||  |||||||||||| |||||| |||||    
T  13139204 catactcacattaccttttaatttatctctctatttttttggttttcgtgcaaataccaactttttctttgtaaattatagttgtc 13139289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 48335610 - 48335679
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 212  Q
    |||| |||| |||||||||||||||||| | |||| |||| |||| ||||||||||  ||||||||||||    
T  48335610 catattcacattattttttactttatctttatattgctatagttttcgtgccaatattacttttttcttt 48335679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 13389453 - 13389370
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccac--ttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||||||||||||||| ||||| |||||||  |||||  ||  |||||||||| || |||||  |||||||||||||||    
T  13389453 tttttactttatctctctattgctatgatttccgtatcaataatactattttttctttataaattatggttgtcaaataagttg 13389370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 31657702 - 31657774
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||  |||||||  ||||||| ||||    
T  31657702 catactcacattactttttactttatctctctattgctttggttttcgtgtaaataccaactttttctatgta 31657774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 23822250 - 23822194
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctt 211  Q
    ||||||||||||||||||||  |||  | ||||||||||||||||| ||||||||||||    
T  23822250 ttattttttactttatctct--attgttttggtttccgtgccaatatcacttttttctt 23822194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 45143686 - 45143610
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||| |||| ||||||||||||||||||||  |||| | |||||| ||||| |||||||  |||||||||||| |||||    
T  45143686 cataatcacattattttttactttatctct--attattttggttttcgtgcaaataccaactttttctttgtaaattat 45143610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 45152455 - 45152379
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||| |||| ||||||||||||||||||||  |||| | |||||| ||||| |||||||  |||||||||||| |||||    
T  45152455 cataatcacattattttttactttatctct--attattttggttttcgtgcaaataccaactttttctttgtaaattat 45152379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 47099078 - 47099154
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||  ||||| ||||| | | ||||||||||| |||||    
T  47099078 catactcacattactttttactttatctctctattgctttggtt--cgtgcaaatactaatattttctttgtaaattat 47099154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 6494898 - 6494852
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaatac 199  Q
    |||||||||||||||| ||||||||  ||||||||||||| ||||||    
T  6494898 ttattttttactttatttctctattgttatggtttccgtgtcaatac 6494852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 18882990 - 18882912
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||||||||  || ||||||||||||||||||||| || || ||| ||| | ||||||  ||||||||||||| |||||    
T  18882990 catactcacaatactttttactttatctctctattgctttgattttcgtacaaatacctattttttctttgtaaattat 18882912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 21617239 - 21617273
Alignment:
Q  143 catactcactttattttttactttatctctctatt 177  Q
    ||||||||| |||||||||||||||||||||||||    
T  21617239 catactcacattattttttactttatctctctatt 21617273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 38338937 - 38338859
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || || |||  |||| ||||||  |||||||||| || |||||    
T  38338937 catactcacattactttttactttatctctctattgctttgatttttgtgcaaatacctattttttctttataaattat 38338859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 45851816 - 45851885
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 213  Q
    ||||||||| | |||||||||||||||||| ||||||| || ||| |||| |||||||  |||||||||||    
T  45851816 catactcacatcattttttactttatctctttattactttgattttcgtg-caatacctattttttctttg 45851885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 52846242 - 52846159
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| ||| ||||||||||||||||  ||| || |||||| ||||| ||||| |  |||||||||||| ||||| ||||||    
T  52846242 catactcacattactttttactttatctct--attgctttggttttcgtgcaaatacaaactttttctttgtaaattatgattgtc 52846159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 12138922 - 12138987
Alignment:
Q  156 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||||||||||||||||||| || |||  |||| ||||||   |||||||||||| |||||    
T  12138922 ttttttactttatctctctattactttgatttttgtgcaaatacctactttttctttgtaaattat 12138987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 33860716 - 33860797
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||||||||||||||||  | |||||||||||| |||||    |||||||||||| |||||  ||||||  |||||||    
T  33860716 tttttactttatctctctattgttttggtttccgtgcaaatacttactttttctttgtaaattatcgttgtcacgtaagttg 33860797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 34995377 - 34995434
Alignment:
Q  144 atactcactttat-tttttactttatctctctattactatggtttccgtgccaatacc 200  Q
    |||||||| |||| ||||||||||  |||||||||||| ||||||||||| |||||||    
T  34995377 atactcaccttatgtttttactttcactctctattactttggtttccgtgtcaatacc 34995434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 236
Target Start/End: Complemental strand, 41389887 - 41389795
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagt 236  Q
    ||||||||  ||||||||| ||||||| || |||| ||||| |||  |||||||||| ||||||| ||||||| |||||  |||| ||||||||    
T  41389887 catactcaaattatttttttctttatcactttattgctatgatttttgtgccaatactacttttt-ctttgtaaattatggttgtaaaataagt 41389795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 56271430 - 56271511
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||| |||||||||||||| || |||||| ||||| ||||||   |||||||||||| |||||  |||||| | ||||||    
T  56271430 tttttattttatctctctattgctttggttttcgtgcaaatacctactttttctttgtaaattatggttgtcataaaagttg 56271511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 49768332 - 49768276
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaatacc 200  Q
    |||||||  ||||||||||||||||||||||||| || || ||| ||||| ||||||    
T  49768332 atactcatattattttttactttatctctctattgctttgattttcgtgcaaatacc 49768276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 55601716 - 55601672
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggttt 187  Q
    ||||||||| |||| ||||||| |||||||||||| |||||||||    
T  55601716 catactcacattatattttactatatctctctattgctatggttt 55601672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 2075466 - 2075371
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||| |||||  |||||||||||||||    
T  2075466 catactcacattattttttactttatctctctattgttatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaaataagttg 2075371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 11547544 - 11547453
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||   ||||||||||    
T  11547544 catactcacattattttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaattatggctgtcaaataa 11547453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 14986746 - 14986664
Alignment:
Q  156 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  14986746 ttttttactttatctctttattgctatggtttccgtgccaataccacttttttctttgtaaagtatgattgtcaaataagttg 14986664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 3610976 - 3610881
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||  || ||||||||||||    
T  3610976 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatggttatcaaataagttg 3610881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 30036797 - 30036714
Alignment:
Q  155 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  30036797 attttttactttatctctctaatgctatggtttccgtgccaataccatttttttctttgtaaagtatgattgtcaaataagttg 30036714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 34504076 - 34504171
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| |||| |||||||||||||||| |||||||||||||| |||||||| ||||||||||||| | ||| ||||||||||||||||    
T  34504076 catactcacattacttttcactttatctctctattgctatggtttccgtgtcaataccaattttttctttgtaaaatatgattgtcaaataagttg 34504171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 2777331 - 2777238
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| |||| |||||||||||||||| | |||||||||||||||||||    
T  2777331 catactcacattactttttactt-atctctctattgctatggtttccgtgctaatatcacttttttctttgtaaaatataattgtcaaataagtt 2777238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 335119 - 335212
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||  |||||||| |||||||||||  ||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||    
T  335119 catactcatattatttttaactttatctct--attgctatggtttccgtgccaatactacttttttctttgtaaattatgattgtcaaataagttg 335212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 5327593 - 5327511
Alignment:
Q  156 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||| | |||  |||||||||||||||    
T  5327593 ttttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttg 5327511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 30152545 - 30152451
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||| | ||||||||||||||||||||| | ||||||||||||| ||||||||| |||||| |||||| | |||  ||||||||||||||    
T  30152545 catactcacataattttttactttatctctctaatgctatggtttccgtaccaataccatttttttatttgtaaagtatggttgtcaaataagtt 30152451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 4820307 - 4820381
Alignment:
Q  143 catactcactttattttttactttatctctctattactat--ggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||||| |||||||||||||||||||||||||  |||  ||||| |||||||||||||||||||||||||||    
T  4820307 catactcacattattttttactttatctctctattgttatatggttttcgtgccaataccacttttttctttgta 4820381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 14693266 - 14693175
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataag 235  Q
    |||||||| |||||||||||||||||||||| || || |||||||||||| ||||||   |||||||||||| |||||| |||||| |||||    
T  14693266 atactcacattattttttactttatctctctgttgctttggtttccgtgcaaatacctactttttctttgtaaattatatttgtcacataag 14693175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 22341189 - 22341095
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||||||  | |||| || |||||||||||| |||||  |||||||||||||||    
T  22341189 catactcacatcattttttactttatctctctattgctatggtttccgtctctatactac-tttttctttgtaaattattgttgtcaaataagttg 22341095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 13658888 - 13658977
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaata 233  Q
    ||||||||| ||||||||||||| |||||||||||  ||||||||||||| |||||| || |||||||||||| |||||  ||||||||||    
T  13658888 catactcacattattttttacttgatctctctattgatatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaata 13658977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 35213576 - 35213491
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||| ||||| ||||||    
T  35213576 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatgattgtc 35213491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 3199016 - 3199106
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||| |||||||| | ||||||||| |||| |||||||||||||| |||||| || ||||||||| || ||||| ||||||||||||    
T  3199016 catactcacattatttttcattttatctctatattgctatggtttccgtgtcaatactac-tttttctttataaattatgattgtcaaataa 3199106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 754453 - 754375
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||| |||||    
T  754453 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattat 754375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 14699679 - 14699601
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| |||||||||||||||||||||| || || |||||| ||||| ||||||   |||||||||||| |||||    
T  14699679 catactcacattattttttactttatctctctgttgctttggttttcgtgcaaatacctactttttctttgtaaattat 14699601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 32459518 - 32459453
Alignment:
Q  156 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||| |||||    
T  32459518 ttttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattat 32459453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 13143397 - 13143319
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| ||||| |  |||||||||||| |||||    
T  13143397 catactcacattactttttactttatctctctattgctttgattttcgtgcaaatacaaactttttctttgtaaattat 13143319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 20822883 - 20822825
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaatacca 201  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||    
T  20822883 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatacca 20822825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 1369430 - 1369494
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||| |||||    
T  1369430 tttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattat 1369494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 6531198 - 6531163
Alignment:
Q  143 catactcactttattttttactttatctctctatta 178  Q
    ||||||||| ||||||||||||||||||||||||||    
T  6531198 catactcacattattttttactttatctctctatta 6531163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 18141316 - 18141221
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| |||||  ||||||  || ||||||||| |||||  |||||| | ||||||    
T  18141316 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaacttattctttgtaaattatggttgtcacaaaagttg 18141221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 26832702 - 26832797
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| | |||||||||||||||||||||||  | |||||| ||||| |||||    |||||||| ||| |||||  |||||| ||||||||    
T  26832702 catactcacatcattttttactttatctctctattgttttggttttcgtgcaaatacatagtttttcttcgtaaattatggttgtcacataagttg 26832797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 10335606 - 10335656
Alignment:
Q  143 catactcactttatttt-ttactttatctctctattactatggtttccgtg 192  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||||||||    
T  10335606 catactcacattatttttttactttctctctctattactttggtttccgtg 10335656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 32046754 - 32046788
Alignment:
Q  143 catactcactttattttttactttatctctctatt 177  Q
    ||||||||| |||||||||||||||||||||||||    
T  32046754 catactcacattattttttactttatctctctatt 32046788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 33421816 - 33421885
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 213  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  33421816 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 33421885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 23628429 - 23628470
Alignment:
Q  157 tttttactttatctctctattactatggtttccgtgccaata 198  Q
    |||||||||||||||||||||| | |||||||||||| ||||    
T  23628429 tttttactttatctctctattattttggtttccgtgcaaata 23628470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 24842424 - 24842480
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 200  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||| ||||||    
T  24842424 catactcacattatttt-tactttatctctctatttttttggtttccgtgcaaatacc 24842480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 756912 - 757007
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| | |||  |||||||||||||||    
T  756912 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccatttttttctttgtaaagtatggttgtcaaataagttg 757007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 1852966 - 1852871
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  1852966 catactcacattatttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 1852871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 3024765 - 3024670
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||| | ||| ||||||||||||||||    
T  3024765 catactcatattattttttactttatctctctattgctatggtttccgtgccaatatcaattttttctttgtaaaatatgattgtcaaataagttg 3024670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 3603167 - 3603262
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  3603167 catactcacattactttttagtttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 3603262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 7128174 - 7128269
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||| |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  7128174 catattcacattattttctactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 7128269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 20565133 - 20565038
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||  |||||||||||||||    
T  20565133 catactcacattactctttactttatctctctattactatggtttccgtggcaataccacttttttctttgtaaaatatggttgtcaaataagttg 20565038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 33024586 - 33024491
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||| | |||  |||||||||||||||    
T  33024586 catactcacattatttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaaataagttg 33024491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 46082136 - 46082045
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||| |||||||||||    
T  46082136 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatagttgtcaaataa 46082045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 38303703 - 38303609
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||| | ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | |||  ||||||||||||||    
T  38303703 catactcgcattattttttactttatctctctattgccatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagtt 38303609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 902694 - 902786
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataag 235  Q
    ||||||||| ||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||| | ||| |||||||||||||    
T  902694 catactcacattactttttactttatctctctattgctatgatttccgtgctaataccacttttttctttgtaaaatatgattgtcaaataag 902786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 4514469 - 4514374
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||| |||| |||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||| | |||  |||||||||||||||    
T  4514469 catattcacattattttttactttatctttctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatgtttgtcaaataagttg 4514374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 8411733 - 8411638
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||| | |||  |||| ||||||||||    
T  8411733 catactcacattattttttactttatctctctattgttttggtttccgtgccaataccacttttttctttgtaaaatatggttgttaaataagttg 8411638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 9008281 - 9008376
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||| | |||  |||||||||||||||    
T  9008281 catactcacattattttttactttatctctctattgccatggtttctatgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 9008376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 26585893 - 26585799
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||| ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||| | |||  |||||||||||||||    
T  26585893 atactcacattattttttactttatcgctctattgttatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttg 26585799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 16986994 - 16987088
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||||||||||||| |||||| ||||| |||||||| |||||| || |||||||||||| ||| ||||||||||||||||||    
T  16986994 catactcacattattttttactttatctttctattgctatgatttccgtgtcaatactac-tttttctttgtaaattttaattgtcaaataagttg 16987088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 26837508 - 26837603
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| ||||||||||||||||||||| |||| ||||| ||| |||||||||||||||||||||| | |||  |||||||||||||||    
T  26837508 catactcacgttactttttactttatctctctattgctatagtttctgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagttg 26837603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 34008236 - 34008330
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||| ||||||||| || |||||||||||| ||| || |||||||||||||||    
T  34008236 catactcacattattttttactttatcttactattactatggtttccatgccaatactac-tttttctttgtaaattttagttgtcaaataagttg 34008330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 47214264 - 47214358
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||||||||||||||||||||  |||||||||||||||||||| || |||||||||||| ||| |  |||||||||||||||    
T  47214264 catactcacattattttttactttatctctctattgttatggtttccgtgccaatactac-tttttctttgtaaattttggttgtcaaataagttg 47214358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 51286382 - 51286288
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||| ||| |  |||||||||||||||    
T  51286382 catactcacattattttttattttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattttggttgtcaaataagttg 51286288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 36673746 - 36673653
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||| |||||  ||||||||||||||    
T  36673746 catactcatgttattttttactttatctctctattgctatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagtt 36673653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 21486332 - 21486268
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttt 207  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  21486332 catactcacattattttttactttatctctctattgctatggtttccgtgccaatactacttttt 21486268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 46172422 - 46172350
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||||| |||||||||| |||||||||||||| |||| |||| |||||||||||||||||||||||||||    
T  46172422 catactcacattattttttattttatctctctattgctatagttttcgtgccaataccacttttttctttgta 46172350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 36779284 - 36779193
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    |||||| || ||| ||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||| | ||| ||||||||||||    
T  36779284 catacttacattactttttactttatctctctattgctatgatttccgtgtcaatatcacttttttctttgtaaaatatgattgtcaaataa 36779193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 51191844 - 51191939
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||  ||||||||||||||||||||  |||| ||||||||||||||||| ||||||||||||| | |||  |||||||||||||||    
T  51191844 catactcacattacattttactttatctctctattgttatgctttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttg 51191939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 21340578 - 21340672
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||| || ||||||| ||||| | |||  |||||||||||||||    
T  21340578 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataacatttttttc-ttgtaaaatatggttgtcaaataagttg 21340672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 32319324 - 32319247
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||||||| |||||| || |||||||||||| |||||    
T  32319324 catactcacattatttttcacttcatctctctattactatggtttccgtgtcaatactac-tttttctttgtaaattat 32319247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 50781585 - 50781500
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||||||| || ||||| ||||||    
T  50781585 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaattatgattgtc 50781500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 1790564 - 1790659
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||  ||| ||||||||||||| |||||||  || |||||||||||||||| || ||||||||||||| | |||  |||||||||||||||    
T  1790564 catactcaaattactttttactttatccctctattgataaggtttccgtgccaatatcatttttttctttgtaaaatatggttgtcaaataagttg 1790659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 13489718 - 13489796
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||| |||||    
T  13489718 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattat 13489796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 50328156 - 50328078
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||| |||||    
T  50328156 catactcacgttactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattat 50328078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 52362538 - 52362616
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||||| |||||||  ||||||||| || |||||    
T  52362538 catactcacattattttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttataaattat 52362616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 44632584 - 44632676
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagt 236  Q
    ||||||||| ||||||||||||||||||||||||| |||| | ||||||| |||| | || |||||||||||| |||||  || ||||||||||    
T  44632584 catactcacattattttttactttatctctctattgctatagattccgtgtcaatgctac-tttttctttgtaaattatggttatcaaataagt 44632676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 32915087 - 32915003
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgt 227  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| |||||||  |||||||||||| ||||| |||||    
T  32915087 catactcacattactttttactttatctctctattgttttggttttcgtgcaaataccaactttttctttgtaaattatgattgt 32915003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 29586049 - 29586095
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttcc 189  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  29586049 catactcacattattttttactttatctctctattattatggtttcc 29586095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 40316959 - 40316881
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  ||||||||| || |||||    
T  40316959 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttataaattat 40316881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 24673132 - 24673216
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||||| |||||||||||||| || | ||||||||| |||||| | ||||||||||||| ||| |  |||||||||||||||    
T  24673132 ttattttttagtttatctctctattgctctagtttccgtgtcaatacta-ttttttctttgtaaatttttgttgtcaaataagttg 24673216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 34254366 - 34254281
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| ||| |||||||||||||||| |||| || |||||| ||||| ||||| |  |||||||||||| |||||| |||||    
T  34254366 catactcacattactttttactttatctctttattgctttggttttcgtgcaaatacaaactttttctttgtaaattatagttgtc 34254281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 38713636 - 38713721
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||||||||||||||| |||| || || ||| ||||| ||||||  |||||||||| || ||||| ||||||| ||||||||    
T  38713636 ttattttttactttatctctttattgctttgattttcgtgcaaatacccattttttctttataaattatgattgtcatataagttg 38713721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 50882115 - 50882034
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataa 234  Q
    |||||||||||||||||||||||||||| || ||| ||||| |||||   |||||||||| || ||||| ||||||| ||||    
T  50882115 ttattttttactttatctctctattactttgattttcgtgcaaatactcattttttctttataaattatgattgtcacataa 50882034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 41507210 - 41507114
Alignment:
Q  143 catactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||| || ||||||||||| ||||||| | |||||| | || |||||||   |||||||||||| |||||| |||||||||||||||    
T  41507210 catactcacattatgttcttactttatctatctattattttggttttcatgtcaatacctactttttctttgtaaattatagttgtcaaataagttg 41507114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 10890061 - 10889966
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| |||||  ||||||  |||||||||||| |||||  |||||| | ||||||    
T  10890061 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaactttttctttgtaaattatggttgtcacaaaagttg 10889966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 230
Target Start/End: Complemental strand, 19969577 - 19969490
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaa 230  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| |||||  ||||||   ||||||||||| |||||  |||||||    
T  19969577 catactcacattactttttactttatctctctattgctttggttttcgtgcacataccaacgttttctttgtaaattatggttgtcaa 19969490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 34040515 - 34040460
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaata 198  Q
    ||||||||| |||||||||||||||||||||||||||| || ||| ||||| ||||    
T  34040515 catactcacattattttttactttatctctctattactttgattttcgtgcaaata 34040460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 15015454 - 15015532
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||||| || |||||||||||||||| ||||||||  | |||||| ||||| |||||||  |||||||||||| |||||    
T  15015454 catacttacattattttttactttatatctctattgttttggttttcgtgcaaataccaactttttctttgtaaattat 15015532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 48220159 - 48220089
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 213  Q
    ||||||||| ||||||||||||||||||||||||| || || |||  |||| |||||||  ||||||||||    
T  48220159 catactcacattattttttactttatctctctatttctttgatttttgtgcaaataccaactttttctttg 48220089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 50824797 - 50824875
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||  ||||||||||||||||||||||||| || |||||| | || |||||||   |||||||||||| |||||    
T  50824797 catactcatattattttttactttatctctctattgctttggttttcatgtcaatacctactttttctttgtaaattat 50824875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 52714916 - 52714838
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| | |||||  |||||||||||| |||||    
T  52714916 catactcacgttactttttactttatctctctattgttttggttttcgtgcaattaccaactttttctttgtaaattat 52714838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 8447793 - 8447886
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagtt 237  Q
    |||||||| | |||||||||||||||||||||||  | | ||||  |||| |||| ||  |||||||||||| ||||| ||||||| |||||||    
T  8447793 atactcacatcattttttactttatctctctattgttttagtttttgtgcaaatatcaactttttctttgtaaattatgattgtcacataagtt 8447886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 46543457 - 46543373
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    |||||||||  |||||||||||||||||||||||| || |||||| ||||| |||| ||  ||||| ||| || ||||||||||||    
T  46543457 catactcacactattttttactttatctctctattgctttggttttcgtgcaaatatcaacttttt-tttttaaattataattgtc 46543373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 3226073 - 3225997
Alignment:
Q  145 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||| ||||||||||||||||||||||||| || |||||| ||| | ||||    ||||||||||||| |||||    
T  3226073 tactcacattattttttactttatctctctattgctttggttttcgtacaaatatatattttttctttgtaaattat 3225997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 35539278 - 35539202
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtca 229  Q
    |||||||||||||||||||||| ||  | |||||||||||| |||||    |||||||||||| |||||| ||||||    
T  35539278 ttattttttactttatctctctgttgttttggtttccgtgcaaatacatactttttctttgtaaattatatttgtca 35539202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 4469433 - 4469358
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||||||||||||||| ||| || ||||||| |||  |||||   ||||||||||||| ||||| ||||||    
T  4469433 ttattttttactttatctctcaattgctttggtttctgtgtaaatacatattttttctttgtaaattatgattgtc 4469358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 8200131 - 8200226
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||||||||||| ||||||| || |||||| ||||| | |||    |||||||||||| |||||  |||||  ||||||||    
T  8200131 catactcacattattttttactttatccctctattgctttggttttcgtgcaactacgtactttttctttgtaaattatggttgtcccataagttg 8200226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 37178769 - 37178824
Alignment:
Q  153 ttattttttactttatctctctattactatggtttccgtgccaataccactttttt 208  Q
    |||||||||  |||| |||| |||| |||||||||||||| |||||||||||||||    
T  37178769 ttatttttttatttagctctttattgctatggtttccgtgtcaataccactttttt 37178824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 47721465 - 47721560
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| |||| ||||||    |||||||||||| |||||  |||||  ||||||||    
T  47721465 catattcacattattttttactttatctctctattgctttgattttcgtgtcaatacttactttttctttgtaaattatggttgtcccataagttg 47721560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 47728457 - 47728552
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| |||| ||||||    |||||||||||| |||||  |||||  ||||||||    
T  47728457 catattcacattattttttactttatctctctattgctttgattttcgtgtcaatacttactttttctttgtaaattatggttgtcccataagttg 47728552  T

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Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 35136900 - 35136978
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| ||||||||||||||||||||| || || |||  |||| ||||| |  |||||||||||| |||||    
T  35136900 catactcacattactttttactttatctctctattgctttgatttttgtgcaaatacaaactttttctttgtaaattat 35136978  T

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Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 36577427 - 36577349
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||| |||||||||||||||| |||| || || ||| ||||| |||||||  ||||||||| || |||||    
T  36577427 catactcacattactttttactttatctctttattgctttgattttcgtgcaaataccaactttttctttataaattat 36577349  T

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Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 44789158 - 44789089
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 213  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  44789158 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 44789089  T

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Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 46911349 - 46911418
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 213  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  46911349 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 46911418  T

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Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 49241520 - 49241435
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-acttttttctttgtatattataattgtc 228  Q
    ||||||||| |||||||||||||||||| |||||| |  |||||| ||||| |||||| |||||| | |||||| ||||| ||||||    
T  49241520 catactcacattattttttactttatctgtctattgcattggttttcgtgcaaatacctacttttct-tttgtaaattatgattgtc 49241435  T

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Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 49660235 - 49660285
Alignment:
Q  143 catactcactttatttt-ttactttatctctctattactatggtttccgtg 192  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||||||||    
T  49660235 catactcacattatttttttactttctctctctattactttggtttccgtg 49660285  T

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Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 176
Target Start/End: Complemental strand, 33054103 - 33054070
Alignment:
Q  143 catactcactttattttttactttatctctctat 176  Q
    ||||||||| ||||||||||||||||||||||||    
T  33054103 catactcacattattttttactttatctctctat 33054070  T

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Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 48326037 - 48326102
Alignment:
Q  156 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||||||||||||||||||||| || || ||| ||| | |||||||  |||||||||||| |||||    
T  48326037 ttttttactttatctctctattgctttgattttcgtacaaataccaactttttctttgtaaattat 48326102  T

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Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 48624933 - 48624966
Alignment:
Q  144 atactcactttattttttactttatctctctatt 177  Q
    |||||||| |||||||||||||||||||||||||    
T  48624933 atactcacattattttttactttatctctctatt 48624966  T

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Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 199
Target Start/End: Original strand, 50242382 - 50242423
Alignment:
Q  158 ttttactttatctctctattactatggtttccgtgccaatac 199  Q
    ||||||||| ||||||||||||| |||||| |||||||||||    
T  50242382 ttttactttctctctctattactttggttttcgtgccaatac 50242423  T

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Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 33358174 - 33358078
Alignment:
Q  143 catactcactttatttttt-actttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||||||||| |||||||||||| |||  | || ||| ||||| ||||||   |||||||||||| |||||  |||||| ||||||||    
T  33358174 catactcacattatttttttactttatctctcaattgatttgattttcgtgcaaatacccactttttctttgtaaattatggttgtcacataagttg 33358078  T

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Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 37588690 - 37588619
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| ||||| || | |||||||||||    
T  37588690 catactcacataattttttactttatctctctattgctttgattttcgtg-caatatcaatattttctttgta 37588619  T

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Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 48261195 - 48261259
Alignment:
Q  143 catactcactttat-tttttactttatctctctattactatggtttccgtgccaataccactttt 206  Q
    ||||||||| |||| |||||||||| |||||||||| || ||||||  ||||||||||| |||||    
T  48261195 catactcacattatgtttttactttctctctctattgctttggtttttgtgccaatacctctttt 48261259  T

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Target: scaffold0471 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 63 - 158
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  63 catactcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 158  T

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Target: scaffold0449 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 9260 - 9354
Alignment:
Q  144 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    |||||||  ||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| || | |||  |||||||||||||||    
T  9260 atactcatattactttttactttatctctctattgctataatttccgtgccaataccacttttttctttataaaatatggttgtcaaataagttg 9354  T

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Target: scaffold0687 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 2253 - 2349
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactt-ttttctttgtatattataattgtcaaataagttg 238  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||| |||||||| || |||| ||| || | ||| ||||||||||||||||    
T  2253 catagtcacattattttttactttatctctctattgctatggtttccgtgtcaataccatttattttttttataaagtatgattgtcaaataagttg 2349  T

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Target: scaffold0136 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 38481 - 38566
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtc 228  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||| |||||| |||||    
T  38481 catactcacgttactttttactttatctctctattgctttggttttcgtgcgaataccaactttttctttgtaaattatagttgtc 38566  T

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Target: scaffold0014 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 122887 - 122952
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactttttt 208  Q
    |||||| || |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  122887 catacttacattattttttactttatttctctattgctatggtttccgtgccaataccaatttttt 122952  T

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Target: scaffold0532 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 11020 - 11115
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattataattgtcaaataagttg 238  Q
    ||||||||| |||||||||||||||||||||||||  | || ||| ||||| ||||||   |||||||||||| ||||| ||||||| ||||||||    
T  11020 catactcacattattttttactttatctctctattgttttgattttcgtgcaaatacccactttttctttgtaaattatgattgtcacataagttg 11115  T

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Target: scaffold0321 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 19692 - 19764
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||| ||  ||||||||||||||||||||||    
T  19692 catactcacattactctttactttatctccctatttctatggtttctgtatcaataccacttttttctttgta 19764  T

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Target: scaffold0010 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 134318 - 134246
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 215  Q
    ||||||||| |||||||||||||||||||| ||||  | |||||| |||| |||||||  |||||||||||||    
T  134318 catactcacattattttttactttatctctttattgttttggttttcgtgtcaatacctattttttctttgta 134246  T

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Target: scaffold1956 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 825 - 904
Alignment:
Q  143 catactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    ||||||||| ||||||| ||||||||||||||||||| | |||||| ||||| |||| |  ||||||||||||| |||||    
T  825 catactcacgttatttttttactttatctctctattattttggttttcgtgcaaatatccattttttctttgtaaattat 904  T

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Target: scaffold0416 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 6914 - 6963
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtg 192  Q
    ||||||||| |||||||||||||| ||||||||||| | |||||||||||    
T  6914 catactcacattattttttactttctctctctattaatttggtttccgtg 6963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 23132 - 23201
Alignment:
Q  143 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 212  Q
    |||| |||| |||||||||||||||||| | |||| |||| |||| ||||||||||  ||||||||||||    
T  23132 catattcacattattttttactttatctttatattgctatagttttcgtgccaatattacttttttcttt 23201  T

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Target: scaffold0141 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 11993 - 12066
Alignment:
Q  148 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtatattat 221  Q
    |||| ||| |||||||||||||||||||||  | |||||| |||||  ||||||  |||||||||||| |||||    
T  11993 tcacattactttttactttatctctctattgttttggttttcgtgcacataccaactttttctttgtaaattat 12066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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