View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11280A_low_359 (Length: 212)
Name: NF11280A_low_359
Description: NF11280A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11280A_low_359 |
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Alignment Details
Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 45269275 - 45269480
Alignment:
| Q |
1 |
gcttgtaagccaatttgagttatagattgttcctgtagtttctgtttttatatatcttataacataatgatgatgtaacttcgtgtcttgcttgaagaga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
45269275 |
gcttgtaagccaatttgagttatagattgttcctgtagtttctgtttttatatatcttataacataatgatgatgtaaattcgtgtcttgcttgaagaga |
45269374 |
T |
|
| Q |
101 |
tttcttttttgacagaagcttgaagagaacttaatgcaacctttttatgttttttaatatactttcaatttagtgtgtctaaactatcacaatttctcta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45269375 |
tttcttttttgacagaagcttgaagagaacttaatgcaacctttttatgttttttaatatactttcaatttagtgtgtctaaactatcacaatttctcta |
45269474 |
T |
|
| Q |
201 |
atttag |
206 |
Q |
| |
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|||||| |
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| T |
45269475 |
atttag |
45269480 |
T |
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