View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11282_high_5 (Length: 423)
Name: NF11282_high_5
Description: NF11282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11282_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 407; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 1 - 407
Target Start/End: Complemental strand, 36568472 - 36568066
Alignment:
| Q |
1 |
ttgtcctttgttaagcctattattaaccatgaatcctgaacaagaatcctcaccaccatgttctttatcagtgacaatgatctctgaggagttattagag |
100 |
Q |
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| T |
36568472 |
ttgtcctttgttaagcctattattaaccatgaatcctgaacaagaatcctcaccaccatgttctttatcagtgacaatgatctctgaggagttattagag |
36568373 |
T |
|
| Q |
101 |
gaagaaagtacagaagccatttcagcagcactagggtttggcaaacctatgtgaagtgcaacagtaacagtagtagttctactactaccatcttcttccc |
200 |
Q |
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| T |
36568372 |
gaagaaagtacagaagccatttcagcagcactagggtttggcaaacctatgtgaagtgcaacagtaacagtagtagttctactactaccatcttcttccc |
36568273 |
T |
|
| Q |
201 |
tttcttctaaatccatggcagtgcaaggaaggtcttgaatatccacctcatgttcttgttgatcttcatcatatttttcttgttttgttggaattaggtt |
300 |
Q |
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| T |
36568272 |
tttcttctaaatccatggcagtgcaaggaaggtcttgaatatccacctcatgttcttgttgatcttcatcatatttttcttgttttgttggaattaggtt |
36568173 |
T |
|
| Q |
301 |
taaaagaggtagttcttctcttagaggaggagaaggtggtgaagaagaggaaatatgatgatgatagtggaaaaaggtatggttattgttgttgtggtgg |
400 |
Q |
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| T |
36568172 |
taaaagaggtagttcttctcttagaggaggagaaggtggtgaagaagaggaaatatgatgatgatagtggaaaaaggtatggttattgttgttgtggtgg |
36568073 |
T |
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| Q |
401 |
tgaagaa |
407 |
Q |
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| T |
36568072 |
tgaagaa |
36568066 |
T |
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