View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11284_high_27 (Length: 213)

Name: NF11284_high_27
Description: NF11284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11284_high_27
NF11284_high_27
[»] chr4 (27 HSPs)
chr4 (1-74)||(11511485-11511558)
chr4 (1-74)||(41236351-41236424)
chr4 (1-74)||(48183072-48183145)
chr4 (1-74)||(480470-480543)
chr4 (1-74)||(6034048-6034121)
chr4 (1-74)||(29239890-29239963)
chr4 (1-74)||(50052451-50052524)
chr4 (1-74)||(3481658-3481731)
chr4 (1-74)||(24995130-24995203)
chr4 (1-74)||(42044390-42044463)
chr4 (1-74)||(50526194-50526267)
chr4 (1-74)||(54473556-54473629)
chr4 (1-74)||(23608239-23608312)
chr4 (1-74)||(29234268-29234341)
chr4 (11-73)||(40574784-40574846)
chr4 (13-73)||(32766963-32767023)
chr4 (13-73)||(47986213-47986273)
chr4 (13-73)||(55079749-55079809)
chr4 (13-73)||(55475196-55475256)
chr4 (12-73)||(31910197-31910258)
chr4 (13-73)||(8343198-8343258)
chr4 (13-73)||(19670751-19670811)
chr4 (5-74)||(29977889-29977958)
chr4 (13-73)||(18924530-18924590)
chr4 (13-73)||(29547994-29548054)
chr4 (13-73)||(44536781-44536840)
chr4 (13-73)||(50813927-50813987)
[»] chr2 (28 HSPs)
chr2 (1-74)||(27864708-27864781)
chr2 (1-74)||(5574511-5574584)
chr2 (5-74)||(19930847-19930916)
chr2 (1-74)||(28863459-28863532)
chr2 (1-74)||(30915467-30915540)
chr2 (1-74)||(7465758-7465831)
chr2 (5-74)||(9058484-9058553)
chr2 (1-74)||(17473024-17473097)
chr2 (1-74)||(33436123-33436196)
chr2 (1-74)||(38882837-38882909)
chr2 (1-74)||(4060689-4060762)
chr2 (1-74)||(10249405-10249478)
chr2 (1-74)||(13438347-13438420)
chr2 (1-74)||(20700819-20700892)
chr2 (1-74)||(32505671-32505744)
chr2 (1-74)||(40701482-40701555)
chr2 (4-74)||(28381681-28381751)
chr2 (10-73)||(40613934-40613997)
chr2 (10-74)||(33436215-33436279)
chr2 (8-73)||(2533129-2533193)
chr2 (1-73)||(26891527-26891599)
chr2 (10-73)||(42257198-42257261)
chr2 (8-73)||(38273172-38273237)
chr2 (13-73)||(38732359-38732419)
chr2 (13-73)||(43490126-43490186)
chr2 (13-73)||(45097770-45097830)
chr2 (13-74)||(41575141-41575202)
chr2 (13-73)||(17820039-17820099)
[»] chr1 (28 HSPs)
chr1 (87-150)||(38208092-38208155)
chr1 (1-74)||(2581919-2581992)
chr1 (1-74)||(9474899-9474972)
chr1 (1-74)||(48716305-48716378)
chr1 (1-74)||(3000323-3000396)
chr1 (1-74)||(26274436-26274509)
chr1 (1-74)||(38632344-38632417)
chr1 (1-74)||(38595158-38595231)
chr1 (1-74)||(47452343-47452416)
chr1 (1-74)||(51898706-51898779)
chr1 (4-74)||(41758809-41758879)
chr1 (1-74)||(8346411-8346484)
chr1 (1-74)||(27564758-27564831)
chr1 (5-74)||(11152405-11152473)
chr1 (4-73)||(32813252-32813321)
chr1 (1-74)||(37649202-37649275)
chr1 (1-74)||(44548399-44548472)
chr1 (1-74)||(50630462-50630535)
chr1 (1-74)||(43136-43209)
chr1 (8-73)||(49811557-49811622)
chr1 (10-74)||(23597123-23597187)
chr1 (13-73)||(47748448-47748507)
chr1 (13-73)||(50591035-50591095)
chr1 (1-54)||(13414785-13414838)
chr1 (13-73)||(5959035-5959095)
chr1 (10-54)||(37814903-37814946)
chr1 (8-58)||(45044590-45044640)
chr1 (13-73)||(41608528-41608588)
[»] chr7 (33 HSPs)
chr7 (1-74)||(8080406-8080479)
chr7 (1-74)||(38267044-38267117)
chr7 (1-74)||(7389393-7389466)
chr7 (1-74)||(36361936-36362009)
chr7 (1-74)||(3434566-3434639)
chr7 (1-74)||(3783999-3784072)
chr7 (1-74)||(35137537-35137610)
chr7 (1-74)||(36362030-36362103)
chr7 (1-74)||(4999537-4999610)
chr7 (1-74)||(19329846-19329919)
chr7 (1-74)||(19436210-19436283)
chr7 (1-74)||(38837221-38837294)
chr7 (1-74)||(40957711-40957784)
chr7 (8-73)||(38044202-38044267)
chr7 (5-73)||(8238217-8238286)
chr7 (1-74)||(32951516-32951589)
chr7 (4-73)||(46033827-46033896)
chr7 (13-73)||(22343366-22343426)
chr7 (10-73)||(18207185-18207248)
chr7 (10-73)||(26296649-26296712)
chr7 (10-73)||(35522881-35522944)
chr7 (10-73)||(39255955-39256018)
chr7 (10-73)||(46374834-46374897)
chr7 (32-74)||(11044192-11044234)
chr7 (7-73)||(40846142-40846208)
chr7 (5-74)||(3694371-3694440)
chr7 (8-73)||(21234406-21234471)
chr7 (13-73)||(7727911-7727971)
chr7 (13-73)||(41915746-41915806)
chr7 (12-74)||(10343597-10343659)
chr7 (17-74)||(35468894-35468951)
chr7 (13-73)||(32564461-32564521)
chr7 (1-73)||(36208178-36208250)
[»] chr5 (23 HSPs)
chr5 (1-74)||(14831818-14831891)
chr5 (1-74)||(18520907-18520980)
chr5 (1-74)||(40145411-40145484)
chr5 (1-74)||(2740278-2740351)
chr5 (1-74)||(33149661-33149734)
chr5 (1-74)||(35785203-35785276)
chr5 (1-74)||(36732965-36733038)
chr5 (1-71)||(13811659-13811729)
chr5 (4-73)||(28177780-28177849)
chr5 (1-70)||(41470439-41470508)
chr5 (5-74)||(42414329-42414398)
chr5 (1-73)||(35943915-35943987)
chr5 (19-74)||(36875644-36875699)
chr5 (4-73)||(6679703-6679772)
chr5 (13-73)||(3921300-3921360)
chr5 (10-73)||(26720521-26720584)
chr5 (10-73)||(26990270-26990333)
chr5 (8-73)||(15409640-15409705)
chr5 (13-73)||(2252203-2252263)
chr5 (10-74)||(33825356-33825420)
chr5 (15-73)||(39688934-39688992)
chr5 (10-58)||(16327921-16327969)
chr5 (1-73)||(31008993-31009065)
[»] chr3 (29 HSPs)
chr3 (1-74)||(49607418-49607491)
chr3 (1-74)||(53982015-53982088)
chr3 (2-74)||(11095377-11095449)
chr3 (1-77)||(48587114-48587190)
chr3 (1-73)||(52629305-52629377)
chr3 (1-74)||(33644204-33644277)
chr3 (1-74)||(9563003-9563076)
chr3 (1-74)||(36707447-36707520)
chr3 (1-74)||(54868918-54868991)
chr3 (1-73)||(33118874-33118946)
chr3 (1-74)||(8076397-8076470)
chr3 (1-74)||(17470409-17470482)
chr3 (5-74)||(27714918-27714987)
chr3 (5-74)||(31456693-31456762)
chr3 (5-74)||(35536630-35536699)
chr3 (10-74)||(8956766-8956830)
chr3 (13-74)||(14623874-14623935)
chr3 (4-73)||(26141558-26141627)
chr3 (4-73)||(26754700-26754769)
chr3 (10-73)||(11347954-11348017)
chr3 (1-74)||(24699977-24700050)
chr3 (5-78)||(30801760-30801833)
chr3 (10-74)||(13898087-13898151)
chr3 (10-70)||(39670019-39670079)
chr3 (13-73)||(45058588-45058647)
chr3 (10-74)||(35965806-35965870)
chr3 (10-73)||(41189796-41189859)
chr3 (10-73)||(47531870-47531933)
chr3 (1-58)||(43745766-43745823)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-73)||(10132-10204)
[»] chr6 (17 HSPs)
chr6 (1-71)||(32869685-32869755)
chr6 (1-74)||(22880681-22880754)
chr6 (2-66)||(31109424-31109488)
chr6 (1-74)||(17598558-17598631)
chr6 (1-74)||(11427620-11427695)
chr6 (1-74)||(6209488-6209561)
chr6 (1-74)||(23128150-23128223)
chr6 (1-74)||(29857831-29857904)
chr6 (13-74)||(31953065-31953126)
chr6 (4-73)||(31976253-31976322)
chr6 (13-73)||(15508059-15508119)
chr6 (13-73)||(15990077-15990137)
chr6 (13-73)||(30341395-30341455)
chr6 (1-74)||(15832581-15832654)
chr6 (32-73)||(31110813-31110854)
chr6 (11-74)||(28536519-28536582)
chr6 (2-71)||(946383-946452)
[»] chr8 (29 HSPs)
chr8 (1-74)||(504144-504217)
chr8 (1-74)||(12831051-12831124)
chr8 (1-74)||(15197337-15197410)
chr8 (1-74)||(23122620-23122693)
chr8 (5-74)||(40423970-40424039)
chr8 (1-71)||(14547929-14547999)
chr8 (5-74)||(1179967-1180036)
chr8 (1-74)||(5957834-5957907)
chr8 (1-74)||(34012319-34012392)
chr8 (1-74)||(37038483-37038556)
chr8 (13-73)||(30479509-30479569)
chr8 (1-74)||(44507110-44507183)
chr8 (1-73)||(10284654-10284726)
chr8 (8-73)||(10621117-10621182)
chr8 (8-73)||(15048212-15048276)
chr8 (10-74)||(20074966-20075030)
chr8 (1-73)||(14055615-14055687)
chr8 (13-73)||(16383382-16383442)
chr8 (13-73)||(34307221-34307281)
chr8 (15-74)||(4854900-4854959)
chr8 (1-59)||(8841455-8841513)
chr8 (4-73)||(43414607-43414676)
chr8 (1-73)||(15258952-15259024)
chr8 (13-73)||(32032730-32032789)
chr8 (39-74)||(9122199-9122234)
chr8 (15-73)||(24307634-24307692)
chr8 (15-73)||(24307830-24307888)
chr8 (10-55)||(30660673-30660717)
chr8 (13-73)||(16056436-16056496)
[»] scaffold1268 (1 HSPs)
scaffold1268 (1-74)||(952-1025)
[»] scaffold1267 (1 HSPs)
scaffold1267 (1-74)||(952-1025)
[»] scaffold0237 (1 HSPs)
scaffold0237 (1-74)||(4033-4106)


Alignment Details
Target: chr4 (Bit Score: 62; Significance: 6e-27; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11511485 - 11511558
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  11511485 cacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 11511558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41236424 - 41236351
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  41236424 cacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcatt 41236351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48183072 - 48183145
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  48183072 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcatt 48183145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 480470 - 480543
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  480470 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcatt 480543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6034121 - 6034048
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||| |||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  6034121 cacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 6034048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29239963 - 29239890
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||| |||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  29239963 cacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcatt 29239890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 50052451 - 50052524
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||||| |||||||||||||||    
T  50052451 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatt 50052524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3481731 - 3481658
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||| ||||||||||||| | ||| |||||||| |||||||||||| ||| |||||||||||||||||    
T  3481731 cacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcatt 3481658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24995130 - 24995203
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||||||  |||||||||| || |||||||    
T  24995130 cacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcatt 24995203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42044390 - 42044463
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| |||  |||| ||||||||||| |||||||||||||||||||||    
T  42044390 cacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcatt 42044463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 50526194 - 50526267
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||| ||||||||||||||| | ||| ||||||||||||||||||||| ||| | |||||||||||||||    
T  50526194 cacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcatt 50526267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 54473556 - 54473629
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||| |||||||| | ||| ||||||| ||||||||| ||| |||||||||||||||||||||    
T  54473556 cacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcatt 54473629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 23608312 - 23608239
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||| ||||||||| ||  ||||||||||||| |||||||    
T  23608312 cacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcatt 23608239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29234268 - 29234341
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| |   | | ||||||||||||||||||  |||||||||||||||||||||    
T  29234268 cacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcatt 29234341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 40574846 - 40574784
Alignment:
Q  11 cgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||||| | ||| |||||||||||||||| |||| ||||| ||||||||||||||    
T  40574846 cgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 40574784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 32767023 - 32766963
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| ||||| |||||| |||||||||||||| |||| |||| ||||||||||    
T  32767023 tgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcat 32766963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 47986273 - 47986213
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | |||||||||| || ||||||||||| ||||||||| ||||||||||    
T  47986273 tgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcat 47986213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 55079749 - 55079809
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| ||||| ||||||  ||||||||||||| ||||||||| ||||||||||    
T  55079749 tgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcat 55079809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 55475256 - 55475196
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| ||||||||||||||||||||| ||||| ||| ||||||||||    
T  55475256 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcat 55475196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 31910258 - 31910197
Alignment:
Q  12 gtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||| | ||| |||||||| |||||||| ||| ||||| ||||||||||||||    
T  31910258 gtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcat 31910197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 8343198 - 8343258
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||||| | | ||||||||| ||||||||||| ||||| ||| ||||||||||    
T  8343198 tgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcat 8343258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 19670751 - 19670811
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||  |||||| |||||||||||||| ||||||||| ||||||||||    
T  19670751 tgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 19670811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 29977958 - 29977889
Alignment:
Q  5 tgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||| | ||| ||| || |||||||||||||| || || | | |||||||||||    
T  29977958 tgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcatt 29977889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 18924530 - 18924590
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||||| |||| |||||||||||||| ||||||| | |||| |||||    
T  18924530 tgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcat 18924590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 29547994 - 29548054
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| || ||||||||||| ||||| ||| ||||||||||    
T  29547994 tgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcat 29548054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 44536781 - 44536840
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | |||||||||| |||||||||||||| |||  |||| ||||||||||    
T  44536781 tgtcagatttttgtgtggatgtcaa-gggtgtattgccacctaaaagtgtttatgtatcat 44536840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 50813927 - 50813987
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| ||||||||| |||| |||| |||| ||||||||||    
T  50813927 tgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcat 50813987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 6e-27; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27864781 - 27864708
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  27864781 cacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 27864708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5574511 - 5574584
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||    
T  5574511 cacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcatt 5574584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 19930847 - 19930916
Alignment:
Q  5 tgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||    
T  19930847 tgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 19930916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28863532 - 28863459
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  28863532 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 28863459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30915540 - 30915467
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||||||| |||||||||||||||||||||    
T  30915540 cacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcatt 30915467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7465758 - 7465831
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||  |||||||||||||||||||||    
T  7465758 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 7465831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 9058553 - 9058484
Alignment:
Q  5 tgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  9058553 tgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 9058484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17473097 - 17473024
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||  |||||||||||||||||||||    
T  17473097 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 17473024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33436123 - 33436196
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||| |||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  33436123 cacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 33436196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38882837 - 38882909
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  38882837 cacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcatt 38882909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4060762 - 4060689
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||| |||||||||||||||||| | ||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  4060762 cacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcatt 4060689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10249405 - 10249478
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||| ||||||||| ||| |||||||||||||||||||||    
T  10249405 cacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcatt 10249478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13438420 - 13438347
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||| ||||||| ||| |||||||||||||||||||||    
T  13438420 cacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcatt 13438347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20700892 - 20700819
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | | |  |||||||||||||||||||||||||| |||||||||||||||    
T  20700892 cacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcatt 20700819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 32505671 - 32505744
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||| ||||||||| ||| |||||||||||||||||||||    
T  32505671 cacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcatt 32505744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 40701555 - 40701482
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||| |||||||||||||||||| | ||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  40701555 cacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatt 40701482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 28381681 - 28381751
Alignment:
Q  4 gtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||||||||| | ||| |||| || ||||||||||||| |||||||||||||||||||||    
T  28381681 gtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcatt 28381751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 40613934 - 40613997
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||| | ||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  40613934 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 40613997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 33436279 - 33436215
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||  ||||| |||||||||||||||    
T  33436279 acgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcatt 33436215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 2533193 - 2533129
Alignment:
Q  8 ctacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||||| | ||| ||||||||| ||||||||||| ||||| ||||||||||||||    
T  2533193 ctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccacttaaggatgtctatgtatcat 2533129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26891527 - 26891599
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||| || |||||||||||| | ||| |||| | |||||||||||||| |||||||| |||||||||||    
T  26891527 cacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcat 26891599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 42257261 - 42257198
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||||| ||| ||||||| | ||||||||||| ||| | ||||||||||||||    
T  42257261 acgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcat 42257198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 38273172 - 38273237
Alignment:
Q  8 ctacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||||| | ||| ||| ||||||||||||||||  ||||  ||||||||||||||    
T  38273172 ctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcat 38273237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 38732419 - 38732359
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| || ||||||| ||||||||||||| ||||||||||    
T  38732419 tgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcat 38732359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 43490186 - 43490126
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| |||||||||| ||| ||||||||| ||||||||||    
T  43490186 tgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcat 43490126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 45097770 - 45097830
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| ||||| |||||| || ||||||||||| ||||| ||| ||||||||||    
T  45097770 tgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcat 45097830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 41575202 - 41575141
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||| |||||| | || ||||||||||||||||| |||  ||||| |||||||||||||||    
T  41575202 tgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatcatt 41575141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 17820039 - 17820099
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| |||||||||||||| ||  | ||||||||||||||    
T  17820039 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcat 17820099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 9e-26; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 38208155 - 38208092
Alignment:
Q  87 tatgaaagaacaagaaaaaagtatccgaaaaaaccaccttatacaaagattggaggtagtgaca 150  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38208155 tatgaatgaacaagaaaaaagtatccgaaaaaaccaccttatacaaagattggaggtagtgaca 38208092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2581992 - 2581919
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  2581992 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 2581919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9474899 - 9474972
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  9474899 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 9474972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48716305 - 48716378
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  48716305 cacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcatt 48716378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3000396 - 3000323
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  3000396 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatt 3000323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26274509 - 26274436
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||| ||||||||||||| | ||||||||||| | |||||||||||||||||||||||||||||||||    
T  26274509 cacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcatt 26274436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38632344 - 38632417
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  38632344 cacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcatt 38632417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38595231 - 38595158
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||| ||||| |||||||||||    
T  38595231 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcatt 38595158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 47452343 - 47452416
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||| |||||||| | ||| |||||||||||||||| |||| |||||||||||||||||||||    
T  47452343 cacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatt 47452416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 51898706 - 51898779
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||| | |||||||||||||||    
T  51898706 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcatt 51898779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 41758879 - 41758809
Alignment:
Q  4 gtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||||  ||| |||||||||||||||||    
T  41758879 gtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcatt 41758809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8346411 - 8346484
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||| ||||||||||||| ||| |||| ||||||||||||    
T  8346411 cacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcatt 8346484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27564758 - 27564831
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||| |||||||||||||||| | ||| ||||||| ||||||||||||| ||||| |||||||||||||||    
T  27564758 cacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcatt 27564831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 11152405 - 11152473
Alignment:
Q  5 tgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||| | |||||||| |||||||||||||||| ||| ||||||||||| |||||    
T  11152405 tgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaa-ggtgtctatgtttcatt 11152473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 32813321 - 32813252
Alignment:
Q  4 gtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||| ||||||||||||||| | ||| ||| ||||||||||||||||| ||||| ||||||||||||||    
T  32813321 gtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 32813252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37649275 - 37649202
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||| ||||||||||||||| | ||| |||||||| |||||||||||| ||| | |||||||||||||||    
T  37649275 cacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcatt 37649202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44548399 - 44548472
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| | ||||| ||||||||||||| ||| | |||||||||||||||    
T  44548399 cacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcatt 44548472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 50630535 - 50630462
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| |  |||||| ||||||||||| ||||||| |||||||||||||    
T  50630535 cacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcatt 50630462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43209 - 43136
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||| ||||||| | | ||||  |||||||||||||||    
T  43209 cacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcatt 43136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 49811557 - 49811622
Alignment:
Q  8 ctacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||||| | ||||||||||| ||||||||| ||| ||||| ||||||| ||||||    
T  49811557 ctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcat 49811622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 23597123 - 23597187
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||||| ||| | |||||| |||||||||||| ||| | |||||||||||||||    
T  23597123 acgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcatt 23597187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 47748507 - 47748448
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||||| | ||||||||||    
T  47748507 tgtcagatttttatatgggtgtcaa-gggtgtattgccacctaagggtatttatgtatcat 47748448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 50591035 - 50591095
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| |||||||||||||| ||||||||| ||||||||||    
T  50591035 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 50591095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13414838 - 13414785
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacat 54  Q
    ||||||||||||||| |||||||| | ||| ||||||||||||||||| |||||    
T  13414838 cacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgtcacat 13414785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 5959035 - 5959095
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| ||||||  ||||||||||||| ||||||||| ||||||||||    
T  5959035 tgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcat 5959095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 37814903 - 37814946
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacat 54  Q
    |||||||||| |||||||||||||| |||||||||||||||||||    
T  37814903 acgtgtcagaattttatatggatgt-aaagggtgtattgccacat 37814946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 45044590 - 45044640
Alignment:
Q  8 ctacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagg 58  Q
    |||| |||||||||||| ||||| ||||||| ||||||||||||| |||||    
T  45044590 ctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaagg 45044640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 41608528 - 41608588
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||  |||||| |||||||||||||| ||||| ||| ||||||||||    
T  41608528 tgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcat 41608588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 1e-24; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8080406 - 8080479
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||||| | | ||||||||||||||||||||| |||||||||||||||||||||    
T  8080406 cacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 8080479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38267117 - 38267044
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||| |||||||||||||||||||||||||    
T  38267117 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcatt 38267044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7389466 - 7389393
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| |||||||| |||||||||||| |||||||||||||||||||||    
T  7389466 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatt 7389393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36361936 - 36362009
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||||||||||||||    
T  36361936 cacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcatt 36362009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3434639 - 3434566
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||| ||||| | ||| ||||||||||||||||||||| ||||| |||||||||||||||    
T  3434639 cacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatt 3434566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3784072 - 3783999
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||| | ||||||||||| |||||||||||||||||||||    
T  3784072 cacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatt 3783999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35137610 - 35137537
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||| |||||||| | ||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  35137610 cacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcatt 35137537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36362103 - 36362030
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||| |||||| |||| |||||||||||||||||||||    
T  36362103 cacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcatt 36362030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4999537 - 4999610
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||| |||||||||| | ||| ||||||| ||||||||||||  |||||||||||||||||||||    
T  4999537 cacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcatt 4999610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19329919 - 19329846
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||| |||||||||||||||| | ||| ||||||| ||||||||||||| ||||| |||||||||||||||    
T  19329919 cacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcatt 19329846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19436210 - 19436283
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||| ||||||||| ||| ||||| |||||||||||||||    
T  19436210 cacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcatt 19436283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38837294 - 38837221
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | | | |||  |||||||||||||||| |||||||||||||||||||||    
T  38837294 cacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcatt 38837221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 40957784 - 40957711
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| | |||||| |||||||||||| |||| ||||||||||||||||    
T  40957784 cacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcatt 40957711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 38044267 - 38044202
Alignment:
Q  8 ctacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||| |||||||||||| | |||||||||| |||||||||||||| ||||||||| ||||||||||    
T  38044267 ctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcat 38044202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 8238286 - 8238217
Alignment:
Q  5 tgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacata-agggtgtctatgtatcat 73  Q
    ||||||| |||||||||||| | ||| ||||||||||||||||||||| || ||||||| ||||||||||    
T  8238286 tgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcat 8238217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 32951516 - 32951589
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||| |||||||| | ||||||| ||||| ||||||| ||  |||| ||||||||||||||||    
T  32951516 cacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcatt 32951589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 46033827 - 46033896
Alignment:
Q  4 gtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||| ||||||||||||||||| ||| ||| ||||||||||||||||| ||||  | ||||||||||||    
T  46033827 gtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcat 46033896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 22343426 - 22343366
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| |||||||||||||| ||||||||| ||||||||||    
T  22343426 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 22343366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 18207248 - 18207185
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||| |||||||| ||||| ||||||  ||||||||||||| ||||| ||||||||||||||    
T  18207248 acgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcat 18207185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 26296712 - 26296649
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||| |||||||||||| ||||||| ||||||| ||||| ||| ||||| ||||||||||||||    
T  26296712 acgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcat 26296649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 35522944 - 35522881
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||| | ||| ||| ||| ||||||||||||| ||||| ||||||||||||||    
T  35522944 acgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 39255955 - 39256018
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||| ||||| | ||||  ||||||||||||| ||||| ||||||||||||||    
T  39255955 acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcat 39256018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 46374834 - 46374897
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||| | ||| ||| ||||||||| ||||||| ||||| ||||||||||||||    
T  46374834 acgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcat 46374897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 11044234 - 11044192
Alignment:
Q  32 tgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  11044234 tgtcaaaggatgtattgccacctaagggtgtctatgtatcatt 11044192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 40846142 - 40846208
Alignment:
Q  7 actacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||| ||| |||||||| | |||||||||| |||||||||||||| ||||| ||| ||||||||||    
T  40846142 actacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcat 40846208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 3694440 - 3694371
Alignment:
Q  5 tgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||| | ||| ||| ||| ||||||||| ||| ||||||||| ||| |||||||    
T  3694440 tgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcatt 3694371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 21234471 - 21234406
Alignment:
Q  8 ctacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||| |||||| | ||  ||||||||||||||||| ||| ||||| ||||||||||||||    
T  21234471 ctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcat 21234406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 7727971 - 7727911
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||||| || |||||||  |||||||| |||| ||||||||| ||||||||||    
T  7727971 tgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcat 7727911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 41915806 - 41915746
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | | | |||||| |||||||||||||| ||||||||| ||||||||||    
T  41915806 tgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 41915746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 10343597 - 10343659
Alignment:
Q  12 gtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||| | ||| ||||||   ||||||| |||| |||||||||||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcatt 10343659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 35468894 - 35468951
Alignment:
Q  17 agatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||| ||| ||||||| | ||||||||||  ||||| |||||||||||||||    
T  35468894 agatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcatt 35468951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 32564461 - 32564521
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| |||||||||||||| ||||  ||| ||||||||||    
T  32564461 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcat 32564521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36208250 - 36208178
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||| || |||||| ||||| | ||| |||||| |  |||||| |||| ||||||||||||||||||||    
T  36208250 cacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcat 36208178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 1e-24; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14831891 - 14831818
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||    
T  14831891 cacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcatt 14831818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18520907 - 18520980
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  18520907 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 18520980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 40145484 - 40145411
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  40145484 cacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcatt 40145411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2740351 - 2740278
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||||| |||||||||||||||    
T  2740351 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatt 2740278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33149661 - 33149734
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||||| |||||| | ||| |||||||||||||||| |||| |||||||||||||||||||||    
T  33149661 cacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatt 33149734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35785276 - 35785203
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||| |||||||||||||||||| | ||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  35785276 cacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatt 35785203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36732965 - 36733038
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||| ||||||||||||| | ||| |||||||||||||||||| || |||||||||||||||||||||    
T  36732965 cacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcatt 36733038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 13811729 - 13811659
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatc 71  Q
    |||||||||||||||||||||||| | ||| ||||||| | ||||||||||| ||||||||||||||||||    
T  13811729 cacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatc 13811659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 28177849 - 28177780
Alignment:
Q  4 gtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||| ||||||||||||||| | ||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  28177849 gtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 28177780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41470439 - 41470508
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtat 70  Q
    ||||||||||||||||||||||||||||| || | ||||| ||||||||||| ||| |||||||||||||    
T  41470439 cacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtat 41470508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 42414329 - 42414398
Alignment:
Q  5 tgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||| ||  |||||||||||||||||    
T  42414329 tgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcatt 42414398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35943915 - 35943987
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||| |||||||||||||||||| | ||| ||||||| | ||||||||||| ||||||||||||||||||||    
T  35943915 cacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcat 35943987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 36875644 - 36875699
Alignment:
Q  19 atttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 36875699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 6679772 - 6679703
Alignment:
Q  4 gtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||| ||||||||||||||| | ||| ||||||| ||||||||||||| ||| | ||||||||||||||    
T  6679772 gtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcat 6679703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 3921300 - 3921360
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| |||||||||||||| ||||||||| ||||||||||    
T  3921300 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 3921360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 26720584 - 26720521
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||| | | | ||| ||||||||||||||||| ||||| ||||||||||||||    
T  26720584 acgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 26720521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 26990333 - 26990270
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||| | | | ||| ||||||||||||||||| ||||| ||||||||||||||    
T  26990333 acgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 26990270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 15409640 - 15409705
Alignment:
Q  8 ctacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||||| | ||| ||||||||  ||||||| ||| ||||| ||||||||||||||    
T  15409640 ctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcat 15409705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 2252203 - 2252263
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| |||||||||||||| ||||| ||| ||||||||||    
T  2252203 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcat 2252263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 33825356 - 33825420
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||||| ||| |||||| | |||||||||||| ||||  |||||||| ||||||    
T  33825356 acgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcatt 33825420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 39688934 - 39688992
Alignment:
Q  15 tcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||| | ||| |||||| || ||||||||||| ||||||||| ||||||||||    
T  39688934 tcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcat 39688992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 16327969 - 16327921
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagg 58  Q
    ||||||||||||||||| ||| |||||| || ||||||||||| |||||    
T  16327969 acgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaagg 16327921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31009065 - 31008993
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||||||||||||||| | ||| |||  |||  ||||||| ||| ||||| ||| ||||||||||    
T  31009065 cacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcat 31008993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 1e-24; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 49607491 - 49607418
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  49607491 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 49607418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 53982088 - 53982015
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  53982088 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 53982015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 11095377 - 11095449
Alignment:
Q  2 acgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  11095377 acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 11095449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 48587114 - 48587190
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcattgct 77  Q
    |||||||||||||||||||||||||| | | ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  48587114 cacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcattgct 48587190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 52629377 - 52629305
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  52629377 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33644277 - 33644204
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| |||||||||||||||||||||  ||||||||||||||||||||    
T  33644277 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcatt 33644204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9563076 - 9563003
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||| ||||| |||||||||||    
T  9563076 cacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcatt 9563003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36707447 - 36707520
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  36707447 cacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcatt 36707520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 54868918 - 54868991
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||| |||||||||||||||||| | ||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  54868918 cacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatt 54868991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33118874 - 33118946
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||||| |||||| | ||| ||||||||||||||||| ||| ||||||||||||||||||||    
T  33118874 cacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcat 33118946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8076470 - 8076397
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||| |||||||| | ||| |||||||||||||| |||||| ||||||||| |||||||||||    
T  8076470 cacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcatt 8076397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17470482 - 17470409
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||| ||| ||||||||||||| ||| |||||||||||||||||    
T  17470482 cacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcatt 17470409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 27714918 - 27714987
Alignment:
Q  5 tgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||| | ||| |||||||||||||||| |||| ||| |||||||||||||||||    
T  27714918 tgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcatt 27714987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 31456762 - 31456693
Alignment:
Q  5 tgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||| | || ||||||||||||||||||    
T  31456762 tgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcatt 31456693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 35536699 - 35536630
Alignment:
Q  5 tgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||| |||||||| |||||||| ||| ||||||| ||||||||||||||||||| |||||||||||||||    
T  35536699 tgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcatt 35536630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 8956830 - 8956766
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||| |||||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||    
T  8956830 acgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcatt 8956766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 14623874 - 14623935
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||| ||| |||||| |||||||||||||| ||||| |||||||||||||||    
T  14623874 tgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcatt 14623935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 26141558 - 26141627
Alignment:
Q  4 gtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||| ||||||||||||||| | ||| ||| ||||||||||||||||| ||||| ||||||||||||||    
T  26141558 gtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 26141627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 26754769 - 26754700
Alignment:
Q  4 gtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||| || |||||||||||| | |||||||| |||||||||||||||| |||||||||||||| |||||    
T  26754769 gtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 11347954 - 11348017
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||| | ||||||||||||| ||||||| ||| ||||| ||||||||||||||    
T  11347954 acgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcat 11348017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24699977 - 24700050
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||| | ||||| ||||||||||| ||| ||||||| ||||||||||||  ||||| |||||||||||||||    
T  24699977 cacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcatt 24700050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 30801760 - 30801833
Alignment:
Q  5 tgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcattgctc 78  Q
    ||||||| ||||| |||||| | ||| | ||||||||||||||  ||| |||||||||||||||||||||||||    
T  30801760 tgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcattgctc 30801833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 13898087 - 13898151
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||||| ||| |||||| |||||||||||||| ||||| ||| ||| |||||||    
T  13898087 acgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcatt 13898151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 39670079 - 39670019
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtat 70  Q
    |||||||| |||||||||| |||||||| || | ||||||||||||||| |||||||||||    
T  39670079 acgtgtcaaatttttatatagatgtcaagggatatattgccacataaggatgtctatgtat 39670019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 45058588 - 45058647
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||||| ||| |||||| |||||||||||||| ||||||||| ||||||||||    
T  45058588 tgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagggtgtttatgtatcat 45058647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 35965806 - 35965870
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||||| ||| ||||||||| ||||||  ||| ||||| ||| |||||||||||    
T  35965806 acgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcatt 35965870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 41189796 - 41189859
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||| |||||||| ||| ||||||| | ||||||||||| ||||| ||| ||||||||||    
T  41189796 acgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcat 41189859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 47531933 - 47531870
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| || | ||||||| ||| ||||||||||||  ||||| ||||||||||||||    
T  47531933 acgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcat 47531870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43745823 - 43745766
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagg 58  Q
    |||||||  |||||||| |||||||  |||||||||||| |||||||||||| |||||    
T  43745823 cacgtgatgacgtgtcaaatttttacgtggatgtcaaagagtgtattgccacttaagg 43745766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10132 - 10204
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  10132 cacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcat 10204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 9e-23; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32869755 - 32869685
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatc 71  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||    
T  32869755 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 32869685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22880681 - 22880754
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||||||| |||| | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  22880681 cacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 22880754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 31109424 - 31109488
Alignment:
Q  2 acgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctat 66  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  31109424 acgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctat 31109488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17598631 - 17598558
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||| ||||||||||||||| | ||| ||||||| | ||||||||||| |||||||||||||||||||||    
T  17598631 cacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatt 17598558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11427695 - 11427620
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacata--agggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||| ||||||||||| ||  |||||||||||||||||||    
T  11427695 cacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcatt 11427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6209488 - 6209561
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||| ||||||||| | ||  |||||||  |||||||||||| |||||||||||||||||||||    
T  6209488 cacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcatt 6209561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23128150 - 23128223
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||| ||||||  ||||||| ||||||||| |||||||    
T  23128150 cacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcatt 23128223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29857904 - 29857831
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||| |||||||||||||||||| | ||| ||| ||| ||||||||||||  ||| |||||||||||||||||    
T  29857904 cacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcatt 29857831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 31953065 - 31953126
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||| ||| |||||| |||||||||||||| ||||| ||||||| |||||||    
T  31953065 tgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcatt 31953126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 31976322 - 31976253
Alignment:
Q  4 gtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||| ||||||||||||||| | ||| ||| ||||||| ||||||||| ||||| ||||||||||||||    
T  31976322 gtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcat 31976253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 15508059 - 15508119
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| |||||||||||||| ||||||||| ||||||||||    
T  15508059 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 15508119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 15990077 - 15990137
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| |||||||||||||| ||||||||| ||||||||||    
T  15990077 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 15990137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 30341395 - 30341455
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| |||||||||||||| ||||||||| ||||||||||    
T  30341395 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 30341455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15832654 - 15832581
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||||| |||||| | ||| ||||||| | | ||||| ||| ||| |||||||||||||||||    
T  15832654 cacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcatt 15832581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 31110813 - 31110854
Alignment:
Q  32 tgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||||||||| ||||| ||||||||||||||    
T  31110813 tgtcaaagggtgtattgccacctaaggatgtctatgtatcat 31110854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 28536519 - 28536582
Alignment:
Q  11 cgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||| | ||| |||||| || ||||||||||| ||||| ||| |||||||||||    
T  28536519 cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 946452 - 946383
Alignment:
Q  2 acgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatc 71  Q
    ||||||||| |||||||||||||   | | ||||||||||||||||  ||| ||||| ||||||||||||    
T  946452 acgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatc 946383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 3e-22; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 504144 - 504217
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  504144 cacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatt 504217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12831124 - 12831051
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  12831124 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcatt 12831051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15197410 - 15197337
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||| ||||||||||||||||    
T  15197410 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcatt 15197337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23122620 - 23122693
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  23122620 cacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcatt 23122693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 40423970 - 40424039
Alignment:
Q  5 tgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  40423970 tgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcatt 40424039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14547999 - 14547929
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatc 71  Q
    |||||||||||||||||||||||| | ||| ||||||| ||||||||||||| ||||||||||||||||||    
T  14547999 cacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatc 14547929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 1179967 - 1180036
Alignment:
Q  5 tgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||| | ||| |||||||||||||||| |||| |||||||||||||||||||||    
T  1179967 tgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatt 1180036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5957907 - 5957834
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||||  |||||||||||||||    
T  5957907 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcatt 5957834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34012319 - 34012392
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||||||||||||||| |||||| | ||| |||||||||||||||| |||| |||||||||||||||||||||    
T  34012319 cacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatt 34012392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37038556 - 37038483
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||| | |||||||||||||||    
T  37038556 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcatt 37038483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 30479509 - 30479569
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  30479509 tgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcat 30479569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44507110 - 44507183
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||||||||| | ||| ||| |||| ||||||| |||| |||||||||||||||||||||    
T  44507110 cacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcatt 44507183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10284654 - 10284726
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||||| |||||| | ||| |||||||| |||||||| ||| ||||||||||||||||||||    
T  10284654 cacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcat 10284726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 10621117 - 10621182
Alignment:
Q  8 ctacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||||| | ||| |||||||||||||||| |||| ||||| ||||||||||||||    
T  10621117 ctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 15048212 - 15048276
Alignment:
Q  8 ctacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  15048212 ctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatcat 15048276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 20074966 - 20075030
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||| |||||||| ||| |||||||| |||||||||||| ||||| |||||||||||||||    
T  20074966 acgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcatt 20075030  T

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Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 14055615 - 14055687
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||||||||| ||| |||||||| | |||||||||| | |||||||| ||| |||||||||| |||||||||    
T  14055615 cacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcat 14055687  T

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Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 16383442 - 16383382
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| |||||||||||||| ||||||||| ||||||||||    
T  16383442 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 16383382  T

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Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 34307281 - 34307221
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| |||||||||||||| ||||||||| ||||||||||    
T  34307281 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 34307221  T

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Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 4854900 - 4854959
Alignment:
Q  15 tcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||| | | ||| ||||||||||||||||| ||||| |||||||||||||||    
T  4854900 tcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcatt 4854959  T

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Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8841455 - 8841513
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataaggg 59  Q
    ||||||||||||||| |||||||| | ||| |||||||||||||| |||||| ||||||    
T  8841455 cacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaaggg 8841513  T

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Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 43414607 - 43414676
Alignment:
Q  4 gtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    ||||| |||||| |||||||| | ||| ||||||||||||| ||||||  ||||| ||||||||||||||    
T  43414607 gtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcat 43414676  T

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Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15258952 - 15259024
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||| || |||||||||||||| |||||||| | || ||||||||||  |||| || ||||||||||||    
T  15258952 cacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcat 15259024  T

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Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 32032789 - 32032730
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | |||||||||| || ||||||||||| ||||||||| ||||||||||    
T  32032789 tgtcagatttttgtgtggatgtcaa-ggatgtattgccacctaagggtgtttatgtatcat 32032730  T

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Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 9122234 - 9122199
Alignment:
Q  39 gggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||| |||||||||||||||||||||    
T  9122234 gggtgtattgccacctaagggtgtctatgtatcatt 9122199  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 24307692 - 24307634
Alignment:
Q  15 tcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||| | ||| |||||| || ||||||||||| ||||||||| ||||||||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcat 24307634  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 24307830 - 24307888
Alignment:
Q  15 tcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||| | ||| |||||| || ||||||||||| ||||||||| ||||||||||    
T  24307830 tcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcat 24307888  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 30660717 - 30660673
Alignment:
Q  10 acgtgtcagatttttatatggatgtcaaagggtgtattgccacata 55  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||    
T  30660717 acgtgtcagaattttatgtggatgt-aaagggtgtattgccacata 30660673  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 16056436 - 16056496
Alignment:
Q  13 tgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 73  Q
    |||||||||||| | ||| |||||| || ||||||| ||||||||| ||| ||||||||||    
T  16056436 tgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcat 16056496  T

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Target: scaffold1268 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 952 - 1025
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||| ||||| | ||||||| ||||||||||||||||| ||| | |||||||||||||||    
T  952 cacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcatt 1025  T

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Target: scaffold1267 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 952 - 1025
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    |||||||||||||||||| ||||| | ||||||| ||||||||||||||||| ||| | |||||||||||||||    
T  952 cacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcatt 1025  T

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Target: scaffold0237 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4106 - 4033
Alignment:
Q  1 cacgtgactacgtgtcagatttttatatggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 74  Q
    ||||| |||||||||||||||||| | ||| ||| ||| ||||||||||||  ||| |||||||||||||||||    
T  4106 cacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcatt 4033  T

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