View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11284_low_13 (Length: 399)
Name: NF11284_low_13
Description: NF11284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11284_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 49 - 389
Target Start/End: Complemental strand, 43928214 - 43927901
Alignment:
| Q |
49 |
aaggaaaataatgtaagagtttgttaatctctcttcgtactcacaacacattttatatttattaatgcattatacgtttaaaaaaggggccaccaaccca |
148 |
Q |
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| T |
43928214 |
aaggaaaataatgtaagagtttgttaatctctcttcgtactcacaacacattttatatttattaatgcattatacgtttaaaaaaggggccatcaatcca |
43928115 |
T |
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| Q |
149 |
acattgggatgatatctgtacaattataaccaattatgtaaaacttaaagcgttgattaaactattcttaaggatttataacataatttacaaaacttaa |
248 |
Q |
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| T |
43928114 |
acattgggatgatatctgtacaattataaccaattatgtaa------------------aactattcttaaggatttataacataatttacaaaacttaa |
43928033 |
T |
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| Q |
249 |
tctttatccatgtttcaattatgattataatcataatcatatatatgtaattttgatacaaggattggggtaccaagtaccaactattt-aatgggcggt |
347 |
Q |
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| T |
43928032 |
tctttatccatgtttcaattatgattataatcataatcatatatatgtaattttgatacaaggattggggtaccaagtaccaactatttaaatgggtgg- |
43927934 |
T |
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| Q |
348 |
acatatatatacaaggggtcaaacatcttccgatcattcttc |
389 |
Q |
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| T |
43927933 |
---------tacaaggggtcaaacatcttccgatcattcttc |
43927901 |
T |
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