View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11284_low_16 (Length: 323)
Name: NF11284_low_16
Description: NF11284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11284_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 10759920 - 10759669
Alignment:
| Q |
19 |
gctttggttcttatatgtgcatcccaaaattattacgtagatttcaaaccatgcatatcaactcacttaaatatgtaaataaaa-tctaaatacgcattt |
117 |
Q |
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| T |
10759920 |
gctttggttcttatatgtgcatcccaaaattattacgtagatttcaaaccatgcatatcaactcacttaaatatgtaaataaaaatctaaatacgcattt |
10759821 |
T |
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| Q |
118 |
tggtaattggtatatattaatctaaatatatatgtgcaatgtataacttttcgtaaatgatatcaagtgaaaataatagtctttggatttaaaatcgggg |
217 |
Q |
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| T |
10759820 |
tggtaatc--tatatat--------atatatatgcgcaatgtataacttttcgtaaatgatatcaagtgaaaataatagtctttggatttaaaatcgggg |
10759731 |
T |
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| Q |
218 |
gtcaagattagaaggctcattatctctactgtatatgggtttttcaaattctagaatttttg |
279 |
Q |
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| T |
10759730 |
gtcaagattagaaggctcattatctctactgtatatgggtttttcaaattccaaaatttttg |
10759669 |
T |
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