View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11284_low_18 (Length: 308)
Name: NF11284_low_18
Description: NF11284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11284_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 18 - 291
Target Start/End: Original strand, 2013623 - 2013894
Alignment:
| Q |
18 |
ggggtaaagacgttttggctgtgagatgaaatccagagttgtttgcatctcgtttccttcccgcgcttcccattatcatttctgttgaacgcaacgcaag |
117 |
Q |
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| T |
2013623 |
ggggtaaagacgttttagctgtgagatgaaatccagagttgtttgcatctcgtttccttcccgcgcttcccactatcatttctgttgaacgcaacgcagg |
2013722 |
T |
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| Q |
118 |
ttggtgttcttgttgtttctgatgattcattttttactctgttcttctaattttcatttccatgtctaattcctccaaacatacacctatgaaaaaccta |
217 |
Q |
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| T |
2013723 |
ttggtgttcttgttgtttctgatgattcattttttactttgttcttctaattttcatttccatgtctaattcctccaaacatacacctatgaaaaaccta |
2013822 |
T |
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| Q |
218 |
cacagacacctgacacgacactgatacttatacactgataataatttgaagaaaaataaatgatcagaggtgtt |
291 |
Q |
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| T |
2013823 |
cacagacacgagacacgacactgatacttatacacagataataatttga--aaaaaaaaatgatcagaggtgtt |
2013894 |
T |
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