View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11284_low_22 (Length: 284)
Name: NF11284_low_22
Description: NF11284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11284_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 21 - 272
Target Start/End: Original strand, 38207126 - 38207381
Alignment:
| Q |
21 |
ttctatcactcgcaacatctcttttgtaa-ttttctaatcacatatgccatctttgtcccaagtattatttgcacttctggtggttgtctgaaacttctc |
119 |
Q |
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| T |
38207126 |
ttctatcactcgcaacatttcttttgttccttttctaatcacatatgctatctt-gtcccaagtattatttgcacttctcgtggttgtccgaaacttctc |
38207224 |
T |
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| Q |
120 |
tctagaatattgtgttgaatacttctctattttaatccttcaaacgtcgccacttgattcgtagagcctgctgtaacttattgtcatatatatacgacta |
219 |
Q |
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|||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38207225 |
tctagaatattgtgttgaatacttatctattttcatccttcaaacgtcgccacttgattcgtagagcctgctgtaacttattgtcatatatatacgacta |
38207324 |
T |
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| Q |
220 |
tatcattgcacaacttata----tgacatggataactatttcaacgttactgcttct |
272 |
Q |
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||||||||||||||||||| | |||| ||||||||||||||||||||||||||| |
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| T |
38207325 |
tatcattgcacaacttatataactaacatagataactatttcaacgttactgcttct |
38207381 |
T |
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