View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11286_high_8 (Length: 293)
Name: NF11286_high_8
Description: NF11286
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11286_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 47119168 - 47118892
Alignment:
| Q |
1 |
gaaggggacaaaatagggtattggctttctgttaccaatcatgtcgtagctttgtgttacaactcagatatgcatataatttgtttattatctggcaatt |
100 |
Q |
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| T |
47119168 |
gaaggggacaaaatagggtattggctttctgttaccaatcatgtcatagctttgtgttacaactcagatatgcatataatttgtttattatctggcaatt |
47119069 |
T |
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| Q |
101 |
attcaatgaaaacaaaactaagctggcaattagtaaatgatatttataattgttgacagttacttagtaactatatagtttgttagcaagctatttttga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47119068 |
attcaatgaaaacaaaactaagctggcaattagtaaatgatatttataattgttgacagttacttagtaactatatagtttgttagcaagctatttttga |
47118969 |
T |
|
| Q |
201 |
gttatgcaaaccaatggtgttatttatagtcaacaaattttctatagattgaaaaacttgaatcaaggaggatgttg |
277 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47118968 |
gttatccaaaccaatggtgttatttatagtcaacaaattttctatagattgaaaaacttgaatcaaggaggatgttg |
47118892 |
T |
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