View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11287_high_18 (Length: 266)
Name: NF11287_high_18
Description: NF11287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11287_high_18 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 38094851 - 38095108
Alignment:
| Q |
1 |
atagaagctctccgtactaagcaatctctggcaatggtcattgttagctcaaatcaggtacagagtgagagtaaagtcaaatttgattcatttatgggac |
100 |
Q |
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| T |
38094851 |
atagaagctctccgtactaagcaatctctggcaatggtcattgttagctcaaatcaggtacagagtgagagtaaagtcaaatttgattcatttatgggac |
38094950 |
T |
|
| Q |
101 |
ttcgattgagaccatcccctccctccaaacctttttccctatacacaatgttttttcttttgctctcacgtacatcactcttccctctttgttcttctaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38094951 |
ttcgattgagaccatcccctccctccaaacctttttccctatacacaatgttttttcttttgctctcacgtacatcactcttccctctttgttcttctaa |
38095050 |
T |
|
| Q |
201 |
ttaacggtcc-nnnnnnnnaaaggaatctttccctgcattcacatcctgattttacgc |
257 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
38095051 |
ttaacggtcctttttttttaaaggaatctttccctgcattcacatcctgattttacgc |
38095108 |
T |
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