View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11287_low_17 (Length: 280)

Name: NF11287_low_17
Description: NF11287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11287_low_17
NF11287_low_17
[»] chr1 (40 HSPs)
chr1 (94-280)||(47683585-47683771)
chr1 (154-280)||(34702288-34702416)
chr1 (161-279)||(48497189-48497309)
chr1 (156-279)||(24134600-24134725)
chr1 (161-279)||(43109214-43109334)
chr1 (155-279)||(15417793-15417919)
chr1 (154-279)||(49619964-49620091)
chr1 (5-70)||(47683498-47683563)
chr1 (155-279)||(4126892-4127018)
chr1 (155-280)||(50011500-50011627)
chr1 (161-280)||(14262696-14262817)
chr1 (161-280)||(30735827-30735948)
chr1 (161-280)||(47651871-47651991)
chr1 (161-279)||(2017661-2017780)
chr1 (154-280)||(40061435-40061563)
chr1 (155-280)||(27054683-27054816)
chr1 (167-276)||(50065015-50065126)
chr1 (167-276)||(50302830-50302941)
chr1 (176-279)||(25031473-25031578)
chr1 (161-279)||(7438620-7438740)
chr1 (155-280)||(12973253-12973380)
chr1 (167-279)||(19424051-19424165)
chr1 (161-280)||(10123028-10123148)
chr1 (161-278)||(8893859-8893978)
chr1 (185-278)||(29936658-29936753)
chr1 (176-280)||(3347678-3347784)
chr1 (161-280)||(23368707-23368828)
chr1 (234-279)||(16985911-16985956)
chr1 (185-279)||(12148549-12148645)
chr1 (234-278)||(30325020-30325064)
chr1 (221-279)||(29332344-29332403)
chr1 (221-279)||(49239823-49239882)
chr1 (8-46)||(574048-574086)
chr1 (234-280)||(15550943-15550989)
chr1 (155-205)||(39304255-39304305)
chr1 (243-280)||(22386223-22386260)
chr1 (156-205)||(25585358-25585407)
chr1 (167-223)||(22386270-22386326)
chr1 (167-223)||(35527370-35527425)
chr1 (171-261)||(52164365-52164457)
[»] chr3 (36 HSPs)
chr3 (153-280)||(27817043-27817171)
chr3 (155-279)||(33528181-33528307)
chr3 (167-279)||(47864641-47864755)
chr3 (185-280)||(44062017-44062113)
chr3 (155-279)||(55426107-55426229)
chr3 (155-279)||(11483606-11483732)
chr3 (161-280)||(39739273-39739394)
chr3 (155-279)||(50381707-50381833)
chr3 (154-265)||(2259149-2259261)
chr3 (156-279)||(25165434-25165563)
chr3 (153-279)||(46798573-46798701)
chr3 (155-280)||(30162650-30162781)
chr3 (146-279)||(46247244-46247381)
chr3 (178-280)||(31435476-31435580)
chr3 (195-280)||(29645802-29645889)
chr3 (155-280)||(36590383-36590515)
chr3 (167-279)||(22602179-22602293)
chr3 (161-280)||(9320934-9321055)
chr3 (154-280)||(32421340-32421468)
chr3 (156-261)||(29226320-29226427)
chr3 (167-279)||(1102672-1102786)
chr3 (171-279)||(27471513-27471623)
chr3 (176-280)||(1325306-1325413)
chr3 (169-279)||(38668135-38668247)
chr3 (162-279)||(166788-166907)
chr3 (155-223)||(8258145-8258213)
chr3 (176-280)||(985894-986000)
chr3 (169-280)||(27394515-27394627)
chr3 (161-205)||(34225194-34225238)
chr3 (154-276)||(45431619-45431743)
chr3 (221-280)||(54457213-54457273)
chr3 (154-205)||(1084080-1084131)
chr3 (167-280)||(7517945-7518060)
chr3 (155-279)||(16141329-16141455)
chr3 (190-279)||(36763460-36763551)
chr3 (234-278)||(50332935-50332979)
[»] chr2 (28 HSPs)
chr2 (150-280)||(34107483-34107614)
chr2 (176-280)||(17543065-17543171)
chr2 (155-280)||(41749940-41750066)
chr2 (179-280)||(3330176-3330279)
chr2 (161-276)||(18424131-18424245)
chr2 (161-279)||(33065233-33065353)
chr2 (171-280)||(6866517-6866628)
chr2 (153-268)||(25553133-25553249)
chr2 (161-268)||(11069336-11069441)
chr2 (176-280)||(42678299-42678405)
chr2 (207-280)||(29090460-29090535)
chr2 (178-278)||(5901808-5901910)
chr2 (161-278)||(27463504-27463622)
chr2 (161-280)||(18949660-18949780)
chr2 (161-276)||(19843342-19843459)
chr2 (156-279)||(43027149-43027274)
chr2 (167-280)||(33482617-33482732)
chr2 (168-280)||(31149077-31149190)
chr2 (161-210)||(16403524-16403573)
chr2 (210-280)||(33613580-33613652)
chr2 (171-280)||(1962835-1962945)
chr2 (229-280)||(5207161-5207212)
chr2 (234-280)||(31605572-31605618)
chr2 (234-280)||(38413030-38413075)
chr2 (243-280)||(4632044-4632081)
chr2 (162-280)||(20435781-20435900)
chr2 (243-279)||(42541238-42541274)
chr2 (243-279)||(42998718-42998754)
[»] chr6 (25 HSPs)
chr6 (155-279)||(6228236-6228362)
chr6 (152-279)||(18903343-18903472)
chr6 (161-280)||(17216957-17217078)
chr6 (156-279)||(20415538-20415663)
chr6 (158-269)||(24794881-24794994)
chr6 (155-280)||(15716983-15717115)
chr6 (167-280)||(29321951-29322066)
chr6 (176-276)||(7954901-7955003)
chr6 (167-280)||(19748104-19748218)
chr6 (148-280)||(30422083-30422216)
chr6 (171-280)||(5641665-5641775)
chr6 (167-279)||(11552876-11552990)
chr6 (234-280)||(3200058-3200104)
chr6 (171-267)||(31637353-31637451)
chr6 (161-280)||(19221699-19221820)
chr6 (101-149)||(2471599-2471647)
chr6 (167-268)||(25091086-25091189)
chr6 (8-46)||(2471746-2471784)
chr6 (187-279)||(3974466-3974560)
chr6 (207-278)||(7164739-7164812)
chr6 (155-201)||(18618595-18618641)
chr6 (171-220)||(21874258-21874307)
chr6 (243-279)||(9763517-9763553)
chr6 (214-280)||(11611421-11611489)
chr6 (161-205)||(25045739-25045783)
[»] scaffold0001 (1 HSPs)
scaffold0001 (155-280)||(419705-419832)
[»] chr8 (35 HSPs)
chr8 (162-280)||(39104607-39104726)
chr8 (161-280)||(4259858-4259979)
chr8 (167-280)||(5904349-5904464)
chr8 (161-280)||(22652682-22652803)
chr8 (155-266)||(41454816-41454929)
chr8 (155-280)||(13906596-13906728)
chr8 (167-280)||(38289210-38289325)
chr8 (156-267)||(1032564-1032677)
chr8 (161-280)||(1360110-1360230)
chr8 (167-280)||(8349458-8349573)
chr8 (179-279)||(43413862-43413964)
chr8 (161-268)||(41845416-41845525)
chr8 (171-280)||(8350445-8350557)
chr8 (154-280)||(19733044-19733172)
chr8 (184-280)||(31153506-31153605)
chr8 (161-223)||(36103956-36104018)
chr8 (161-280)||(45536717-45536838)
chr8 (154-280)||(36587625-36587753)
chr8 (155-280)||(10161957-10162089)
chr8 (155-279)||(44828408-44828535)
chr8 (169-276)||(279976-280084)
chr8 (169-276)||(635768-635876)
chr8 (169-276)||(821571-821679)
chr8 (184-279)||(34037924-34038021)
chr8 (229-280)||(11052559-11052610)
chr8 (167-276)||(19957300-19957411)
chr8 (155-222)||(30466672-30466739)
chr8 (146-220)||(12831555-12831628)
chr8 (162-266)||(33820384-33820490)
chr8 (171-280)||(38544900-38545010)
chr8 (176-268)||(6938625-6938718)
chr8 (155-279)||(23139067-23139195)
chr8 (167-278)||(43456630-43456742)
chr8 (162-280)||(39172188-39172307)
chr8 (237-277)||(27102310-27102350)
[»] chr7 (35 HSPs)
chr7 (154-279)||(48433686-48433813)
chr7 (155-278)||(23824569-23824693)
chr7 (171-279)||(3961384-3961494)
chr7 (176-279)||(4956068-4956173)
chr7 (155-264)||(40273814-40273925)
chr7 (161-279)||(31793467-31793587)
chr7 (155-280)||(38378212-38378339)
chr7 (155-279)||(24029978-24030103)
chr7 (155-279)||(33248778-33248904)
chr7 (161-279)||(27454010-27454131)
chr7 (176-269)||(43440703-43440798)
chr7 (167-279)||(12166087-12166201)
chr7 (163-279)||(28914853-28914972)
chr7 (155-276)||(36528198-36528321)
chr7 (161-269)||(42554633-42554743)
chr7 (161-277)||(48619796-48619913)
chr7 (155-278)||(26455982-26456107)
chr7 (162-279)||(23602274-23602393)
chr7 (155-279)||(5228064-5228189)
chr7 (156-231)||(42338272-42338348)
chr7 (155-221)||(8249698-8249764)
chr7 (215-280)||(37563226-37563292)
chr7 (167-223)||(3902308-3902363)
chr7 (171-280)||(20013591-20013701)
chr7 (229-280)||(22156166-22156217)
chr7 (229-280)||(22212081-22212132)
chr7 (155-280)||(26606084-26606211)
chr7 (153-280)||(37918671-37918800)
chr7 (155-221)||(8133831-8133897)
chr7 (154-278)||(15025148-15025274)
chr7 (161-223)||(44986593-44986655)
chr7 (161-279)||(3889776-3889897)
chr7 (201-280)||(10091432-10091513)
chr7 (162-223)||(24315387-24315448)
chr7 (162-276)||(37665744-37665860)
[»] chr5 (27 HSPs)
chr5 (156-279)||(31250141-31250266)
chr5 (156-280)||(43227860-43227987)
chr5 (155-279)||(38503233-38503359)
chr5 (167-279)||(33545363-33545476)
chr5 (167-280)||(5263174-5263289)
chr5 (155-280)||(12375382-12375514)
chr5 (161-280)||(17077360-17077481)
chr5 (161-280)||(42208916-42209036)
chr5 (155-280)||(4395826-4395953)
chr5 (155-280)||(5039674-5039800)
chr5 (176-278)||(15106864-15106968)
chr5 (155-280)||(15470596-15470723)
chr5 (161-280)||(15696206-15696331)
chr5 (166-278)||(1572114-1572228)
chr5 (171-261)||(34729481-34729572)
chr5 (155-279)||(930914-931040)
chr5 (169-222)||(42643838-42643891)
chr5 (101-149)||(8981259-8981307)
chr5 (167-280)||(15680876-15680991)
chr5 (8-46)||(8981122-8981160)
chr5 (181-223)||(29530793-29530835)
chr5 (153-202)||(461997-462046)
chr5 (179-278)||(26671600-26671701)
chr5 (179-278)||(26943197-26943298)
chr5 (243-280)||(36037568-36037605)
chr5 (212-280)||(42902040-42902109)
chr5 (171-257)||(87800-87888)
[»] chr4 (36 HSPs)
chr4 (161-280)||(16556450-16556571)
chr4 (154-279)||(46283114-46283241)
chr4 (154-279)||(50815699-50815826)
chr4 (156-279)||(40406936-40407062)
chr4 (179-280)||(45355693-45355795)
chr4 (179-280)||(45369434-45369536)
chr4 (167-279)||(11491195-11491309)
chr4 (155-279)||(51974740-51974866)
chr4 (161-280)||(36993040-36993161)
chr4 (155-268)||(13210146-13210266)
chr4 (176-280)||(42154580-42154686)
chr4 (161-280)||(26885375-26885496)
chr4 (176-260)||(22096386-22096472)
chr4 (156-276)||(38690660-38690782)
chr4 (155-278)||(2832048-2832173)
chr4 (161-280)||(48404112-48404233)
chr4 (161-278)||(37889583-37889702)
chr4 (155-279)||(37574266-37574391)
chr4 (171-279)||(45847902-45848012)
chr4 (152-258)||(43362165-43362273)
chr4 (169-278)||(25234835-25234946)
chr4 (229-280)||(49811383-49811434)
chr4 (155-231)||(27862856-27862933)
chr4 (140-278)||(35909005-35909146)
chr4 (228-276)||(2931132-2931180)
chr4 (155-276)||(8716547-8716667)
chr4 (101-149)||(27134797-27134845)
chr4 (154-241)||(41971314-41971402)
chr4 (8-46)||(27134945-27134983)
chr4 (182-261)||(22525409-22525489)
chr4 (154-223)||(23448965-23449034)
chr4 (243-280)||(39719780-39719817)
chr4 (155-204)||(49635425-49635474)
chr4 (161-222)||(52366206-52366267)
chr4 (101-149)||(11322216-11322264)
chr4 (162-229)||(53758975-53759042)
[»] scaffold0018 (1 HSPs)
scaffold0018 (155-280)||(121769-121901)
[»] scaffold0007 (1 HSPs)
scaffold0007 (188-279)||(146799-146891)


Alignment Details
Target: chr1 (Bit Score: 159; Significance: 1e-84; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 94 - 280
Target Start/End: Original strand, 47683585 - 47683771
Alignment:
Q  94 atttgctagtaatgcaggaaagaaagaaagaaatataacctatctaaaaaagaaaataatagtccctatgagattagctcaattggtaaaggataatgca 193  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  47683585 atttgctcgtaatgcaggaaagaaagaaagaaatataacctatataaaaaagaaaataatagtccctatgagattagcttaattggtaagggataatgca 47683684  T
Q  194 caatatgtgcagaggccggagttcgaacccggacacccagttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47683685 caatatgtgcagaggccggagttcgaacccggatatccagttattcatgtttaagatgaatttctctaaccactaggctacttgaca 47683771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 154 - 280
Target Start/End: Complemental strand, 34702416 - 34702288
Alignment:
Q  154 agtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacacc-cagttattcatgtttaagatg 251  Q
    |||||| ||||| |||||||| ||||||| |||||||||||||||||||||| |||||| ||||||| |||||||||| || |||||||| |||||||||    
T  34702416 agtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacacctcacttattcatctttaagatg 34702317  T
Q  252 aatttctctagccactaggctacttgaca 280  Q
    ||||||| |||||||||| ||||||||||    
T  34702316 aatttctttagccactagactacttgaca 34702288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 161 - 279
Target Start/End: Complemental strand, 48497309 - 48497189
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacac-ccagttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||| |||||||||||||| ||||||||| ||| |||||||| |||||| | |||||||    
T  48497309 atgagtttagctcatttggtaagggataatgcacaatatgtgcaggggccggagttcgaatcccggacactccatttattcatctttaaggtaaatttct 48497210  T
Q  259 ctagccactaggctacttgac 279  Q
    |||||||||||||||||||||    
T  48497209 ctagccactaggctacttgac 48497189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 156 - 279
Target Start/End: Complemental strand, 24134725 - 24134600
Alignment:
Q  156 tccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaa 253  Q
    |||| ||||| |||||||| ||||||| |||||||||||||||||||||| |||||| ||||||| |||||||| |||| |||||||| |||||| ||||    
T  24134725 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaa 24134626  T
Q  254 tttctctagccactaggctacttgac 279  Q
    ||||||||||||||||||| ||||||    
T  24134625 tttctctagccactaggctgcttgac 24134600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 161 - 279
Target Start/End: Complemental strand, 43109334 - 43109214
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacacc-cagttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||||||| |||||||||| ||||||||||| |||||| ||||||| |||||||||| || |||||||| |||||| |||||||||    
T  43109334 atgagcttagctcatttggtaagggataatgcaaaatatgtgcaggggccggggttcgaaccccggacacctcatttattcatctttaaggtgaatttct 43109235  T
Q  259 ctagccactaggctacttgac 279  Q
    |||||||||||||||||||||    
T  43109234 ctagccactaggctacttgac 43109214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 155 - 279
Target Start/End: Complemental strand, 15417919 - 15417793
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggacaccc-agttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||||||||||||||||||||||||||| || ||| || ||||||| | ||||||||| | |||||||| ||||||||||    
T  15417919 gtccccatgagcttagctcatttggtaaaggataatgcacaatatgtgtaggggctggggttcgaagctcggacaccccacttattcatctttaagatga 15417820  T
Q  253 atttctctagccactaggctacttgac 279  Q
    |||||||||| ||||||||||||||||    
T  15417819 atttctctagtcactaggctacttgac 15417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 154 - 279
Target Start/End: Original strand, 49619964 - 49620091
Alignment:
Q  154 agtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttc-gaacccggaca-cccagttattcatgtttaagatg 251  Q
    |||||| ||||| |||||||| ||||||| |||||||||||||||||||||| || ||| |||| || |||||||| |||| |||||||| |||||  ||    
T  49619964 agtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcagaccccggacaccccacttattcatctttaaagtg 49620063  T
Q  252 aatttctctagccactaggctacttgac 279  Q
    ||||||||||||||||||||||||||||    
T  49620064 aatttctctagccactaggctacttgac 49620091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 47683498 - 47683563
Alignment:
Q  5 tgctcacatgcttgcgatgtagtgagctaatgatggtggtttttacggtgattggcacacatggtc 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  47683498 tgctcacatgcttgcgatgtagtgagctaatgatggtggtttttacagtgattggcacacatggtc 47683563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 279
Target Start/End: Original strand, 4126892 - 4127018
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggaca-cccagttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||||| |||||||||||  ||| |||| ||||||| |||| |||||||| |||||| |||    
T  4126892 gtccccatgagtttagctcatttggtaagggataatgcacaatatatgcagaggccgatgtttgaacaccggacaccccatttattcatctttaaggtga 4126991  T
Q  253 atttctctagccactaggctacttgac 279  Q
    |||| |||||||||||| |||||||||    
T  4126992 atttatctagccactagactacttgac 4127018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 280
Target Start/End: Original strand, 50011500 - 50011627
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||||||||||| ||| || ||||||| ||| |||| |||| |||||||| |||||| |||    
T  50011500 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacatcccacttattcatctttaaggtga 50011599  T
Q  253 atttctctagccactaggctacttgaca 280  Q
    ||||||||||| ||| | ||||||||||    
T  50011600 atttctctagctactggactacttgaca 50011627  T

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Target: chr1; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 14262817 - 14262696
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttct 258  Q
    ||||||||| |||| ||| ||| |||||||||||||||| ||||| || ||| |||||||||| |||||||| | |||||||| |||||| |||||||||    
T  14262817 atgagattaactcatttgataagggataatgcacaatatatgcaggggtcggggttcgaaccccggacaccctacttattcatctttaaggtgaatttct 14262718  T
Q  259 ctagccactaggctacttgaca 280  Q
    |||||||||| |||| ||||||    
T  14262717 ctagccactaagctatttgaca 14262696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 30735827 - 30735948
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacacc-cagttattcatgtttaagatgaatttct 258  Q
    ||||| ||| |||| ||||||| |||||||||||||| ||||||| |||||||||| |||||| ||||||| || |||||||| |  ||| |||||||||    
T  30735827 atgagcttaactcatttggtaagggataatgcacaatttgtgcaggggccggagtttgaaccctggacaccacacttattcatctcaaaggtgaatttct 30735926  T
Q  259 ctagccactaggctacttgaca 280  Q
    ||| ||||||||||||||||||    
T  30735927 ctaaccactaggctacttgaca 30735948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 47651871 - 47651991
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||| ||| || ||||||| ||  |||| |||| |||||||| |||||| |||||||||    
T  47651871 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaatcctagacatcccacttattcat-tttaaggtgaatttct 47651969  T
Q  259 ctagccactaggctacttgaca 280  Q
    ||||||||| ||||||||||||    
T  47651970 ctagccactgggctacttgaca 47651991  T

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Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 279
Target Start/End: Complemental strand, 2017780 - 2017661
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||| |||| || ||||||| |||||||| |||| || ||||| |||||| |||||||||    
T  2017780 atgagcttagctcatttggtaagggataatgcacaatatgtgcataggctggggttcgaatcccggacaccccacttgttcat-tttaaggtgaatttct 2017682  T
Q  259 ctagccactaggctacttgac 279  Q
    ||||||||||  |||||||||    
T  2017681 ctagccactaaactacttgac 2017661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 280
Target Start/End: Original strand, 40061435 - 40061563
Alignment:
Q  154 agtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggacaccc-agttattcatgtttaagatg 251  Q
    |||||| ||||| ||| |||| ||||||| ||||| ||||||||||||  || ||| || |||||||| |||||||||| | |||||||| |||||| ||    
T  40061435 agtccccatgagcttaactcatttggtaagggatagtgcacaatatgtataggggctggggttcgaactccggacaccccacttattcatctttaaggtg 40061534  T
Q  252 aatttctctagccactaggctacttgaca 280  Q
     ||||||||||||||||||||||||||||    
T  40061535 gatttctctagccactaggctacttgaca 40061563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 280
Target Start/End: Original strand, 27054683 - 27054816
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-------ggacacc-cagttattcatgttta 246  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||||| ||||| |||||| ||||||||||        | |||| || |||||||| ||||    
T  27054683 gtccccatgagcttagctcatttggtaagggataatgcacaatatctgcaggggccggggttcgaacccccggcataggcacctcacttattcatcttta 27054782  T
Q  247 agatgaatttctctagccactaggctacttgaca 280  Q
    || |||||||||||||||||||||||||||||||    
T  27054783 aggtgaatttctctagccactaggctacttgaca 27054816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 167 - 276
Target Start/End: Original strand, 50065015 - 50065126
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggacaccc-agttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| ||| ||| |||||||||||||||||||||| | |||| ||||||| | ||||||||| | |||||||| |||||| |||||||||||||||    
T  50065015 ttagctcatttgataagggataatgcacaatatgtgcagggaccggggttcgaatctcggacaccccacttattcatctttaaggtgaatttctctagcc 50065114  T
Q  265 actaggctactt 276  Q
    |||| |||||||    
T  50065115 actaagctactt 50065126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 167 - 276
Target Start/End: Complemental strand, 50302941 - 50302830
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggcc-ggagttcgaacccggacaccc-agttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| ||||||| |||||||||| |||||||||||||| | || |||||||||| ||||| | | |||||||| |||||| |||||||||||||||    
T  50302941 ttagctcatttggtaagggataatgcataatatgtgcagagggctggggttcgaaccctgacactctacttattcatctttaaggtgaatttctctagcc 50302842  T
Q  265 actaggctactt 276  Q
    ||||| ||||||    
T  50302841 actagactactt 50302830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 25031578 - 25031473
Alignment:
Q  176 ttggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggacaccc-agttattcatgtttaagatgaatttctctagccactaggcta 273  Q
    |||||||  ||||||||| ||||||||||| |||||| |||||||  |||||||||| | |||||||| |||||| |||||||||||||||||||||||     
T  25031578 ttggtaagagataatgcataatatgtgcaggggccggggttcgaattccggacaccccacttattcatctttaaggtgaatttctctagccactaggctg 25031479  T
Q  274 cttgac 279  Q
    ||||||    
T  25031478 cttgac 25031473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 279
Target Start/End: Original strand, 7438620 - 7438740
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggaca-cccagttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||||||| |||||||||||||| |||| || || ||| |||||||| ||||||| |||| |||||||| || ||| |||||||||    
T  7438620 atgagcttagctcatttggtaagggataatgcacaatttgtgtaggggtcggggttcgaactccggacaccccacttattcatcttaaaggtgaatttct 7438719  T
Q  259 ctagccactaggctacttgac 279  Q
     |||||||||| |||||||||    
T  7438720 ttagccactagactacttgac 7438740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 280
Target Start/End: Complemental strand, 12973380 - 12973253
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggaca-cccagttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||||| ||||| |||||   ||| ||| || |||| |||| |||||||| |||||| | |    
T  12973380 gtccccatgagtttagctcatttggtaagggataatgcacaatatatgcaggggccgagattcaaactcctgacaccccacttattcatctttaaggtaa 12973281  T
Q  253 atttctctagccactaggctacttgaca 280  Q
    |||||| |||||||||| ||||||||||    
T  12973280 atttctttagccactagactacttgaca 12973253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 19424051 - 19424165
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| ||| ||| |||||||||| | ||| ||||| || ||| |||||||||| |||||||| | |||||||  |||||| |||||||||||||||    
T  19424051 ttagctcatttgataagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattcacctttaaggtgaatttctctagcc 19424150  T
Q  265 actaggctacttgac 279  Q
     ||||||||||||||    
T  19424151 gctaggctacttgac 19424165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 10123148 - 10123028
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccgga-caccc-agttattcatgtttaagatgaatttct 258  Q
    ||||| ||| |||| ||||||| |||||||  |||||||||| || || ||| ||||||||||  | ||||| | |||||||| |||||| |||||||||    
T  10123148 atgagcttaactcatttggtaagggataatt-acaatatgtgtaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggtgaatttct 10123050  T
Q  259 ctagccactaggctacttgaca 280  Q
    ||||||||||||||||||||||    
T  10123049 ctagccactaggctacttgaca 10123028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 8893859 - 8893978
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttct 258  Q
    ||||| |||| ||| ||||||| |||||||||||||||||| ||| || ||| ||||||| |||  ||| |||| |||||||| |||||| |||||||||    
T  8893859 atgagcttagttcatttggtaagggataatgcacaatatgtacaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggtgaatttct 8893958  T
Q  259 ctagccactaggctacttga 278  Q
    | | |||||||| |||||||    
T  8893959 ccaaccactaggttacttga 8893978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 278
Target Start/End: Complemental strand, 29936753 - 29936658
Alignment:
Q  185 gataatgcacaatatgtgcagaggccggagttcgaac-ccggacaccc-agttattcatgtttaagatgaatttctctagccactaggctacttga 278  Q
    |||||||||| || ||||||| || |||||||||||| |||||||||| | |||||||| || ||  |||||||||||||||| ||||||||||||    
T  29936753 gataatgcacgatttgtgcaggggtcggagttcgaactccggacaccccacttattcatcttaaaagtgaatttctctagccattaggctacttga 29936658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 3347784 - 3347678
Alignment:
Q  176 ttggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccgg-acaccc-agttattcatgtttaagatgaatttctctagccactaggcta 273  Q
    ||||||| |||||||| ||||||||| |||  | ||| |||||||||| | |||||| | |||||||| |||||| ||||||||||||| |||||||||     
T  3347784 ttggtaatggataatgtacaatatgttcaggagtcggggttcgaaccccgtacaccccacttattcatctttaaggtgaatttctctagtcactaggctg 3347685  T
Q  274 cttgaca 280  Q
    |||||||    
T  3347684 cttgaca 3347678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 23368828 - 23368707
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||| ||| |||||||||||| | ||||||| | |||  |||||||||| |||||||| | |||||||  || ||| ||||||| |    
T  23368828 atgagcttagctcatttgataagggataatgcacattttgtgcagggaccgatgttcgaaccccggacaccccacttattcacattaaaggtgaatttat 23368729  T
Q  259 ctagccactaggctacttgaca 280  Q
    ||||||||||| ||||||||||    
T  23368728 ctagccactagtctacttgaca 23368707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 16985956 - 16985911
Alignment:
Q  234 ttattcatgtttaagatgaatttctctagccactaggctacttgac 279  Q
    |||||||| |||||| ||||||||||||||||||||| ||||||||    
T  16985956 ttattcatctttaaggtgaatttctctagccactaggttacttgac 16985911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 12148645 - 12148549
Alignment:
Q  185 gataatgcacaatatgtgcagaggccggagttcgaacccg-gacaccc-agttattcatgtttaagatgaatttctctagccactaggctacttgac 279  Q
    ||||||| ||||||||||||| || |||||||| |||||  ||||||| | |||||||| |||||| ||||||||||| | |||||| || ||||||    
T  12148645 gataatgtacaatatgtgcaggggtcggagttcaaaccccagacaccccacttattcatctttaaggtgaatttctctggacactagactgcttgac 12148549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 30325064 - 30325020
Alignment:
Q  234 ttattcatgtttaagatgaatttctctagccactaggctacttga 278  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||    
T  30325064 ttattcatctttaagatgaatttctctagccactaaactacttga 30325020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 29332344 - 29332403
Alignment:
Q  221 cccggacaccc-agttattcatgtttaagatgaatttctctagccactaggctacttgac 279  Q
    ||||||||||| | |||||||  |||||| ||||||||||||||| ||||||||||||||    
T  29332344 cccggacaccccacttattcacctttaaggtgaatttctctagccgctaggctacttgac 29332403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 49239882 - 49239823
Alignment:
Q  221 cccggacaccc-agttattcatgtttaagatgaatttctctagccactaggctacttgac 279  Q
    ||||||||||| | |||||||| |||||| | ||||||||||||||||| ||||||||||    
T  49239882 cccggacaccccacttattcatctttaaggtaaatttctctagccactaagctacttgac 49239823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 574086 - 574048
Alignment:
Q  8 tcacatgcttgcgatgtagtgagctaatgatggtggttt 46  Q
    |||||||||||| || |||||||||||||||||||||||    
T  574086 tcacatgcttgcaatatagtgagctaatgatggtggttt 574048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 280
Target Start/End: Original strand, 15550943 - 15550989
Alignment:
Q  234 ttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||||||| |||||| ||||||||| ||||||||||| |||||||||    
T  15550943 ttattcatctttaaggtgaatttctgtagccactaggttacttgaca 15550989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 39304305 - 39304255
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcag 205  Q
    ||||| ||||| |||||||| ||||||| |||||||||| |||||||||||    
T  39304305 gtccccatgagcttagctcatttggtaagggataatgcataatatgtgcag 39304255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 280
Target Start/End: Complemental strand, 22386260 - 22386223
Alignment:
Q  243 tttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  22386260 tttaaggtgaatttctctagccactagactacttgaca 22386223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 25585407 - 25585358
Alignment:
Q  156 tccctatgagattagctcaattggtaaaggataatgcacaatatgtgcag 205  Q
    |||| ||||| |||| ||| |||||||||||| |||||||||||||||||    
T  25585407 tccccatgagcttagttcatttggtaaaggatgatgcacaatatgtgcag 25585358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 22386326 - 22386270
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc 223  Q
    |||||||| ||||||| |||| ||||||||||||||||| ||  || ||||||||||    
T  22386326 ttagctcatttggtaagggattatgcacaatatgtgcaggggttggggttcgaaccc 22386270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 35527425 - 35527370
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc 223  Q
    |||||||| ||||||| ||||||||||||||||||| || || ||||||| ||||||    
T  35527425 ttagctcatttggtaagggataatgcacaatatgtg-aggggtcggagtttgaaccc 35527370  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 261
Target Start/End: Complemental strand, 52164457 - 52164365
Alignment:
Q  171 ctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctcta 261  Q
    |||| |||||||  ||||||||||||||||||||| |  ||| |||||||  ||||||| |||| ||||| || |||||| ||||||||||||    
T  52164457 ctcatttggtaagagataatgcacaatatgtgcagggatcggggttcgaattccggacaccccacttattaatttttaaggtgaatttctcta 52164365  T

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Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 153 - 280
Target Start/End: Complemental strand, 27817171 - 27817043
Alignment:
Q  153 tagtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccggaca-cccagttattcatgtttaagatg 251  Q
    ||||||||||||| ||| |||| ||||||| |||||||||||||| ||||||| |||||||||||||||||||||| |||| |||||||| |||||| ||    
T  27817171 tagtccctatgagcttacctcatttggtaagggataatgcacaatttgtgcaggggccggagttcgaacccggacaccccatttattcatctttaagttg 27817072  T
Q  252 aatttctctagccactaggctacttgaca 280  Q
    |||||||||||||||||||||||||||||    
T  27817071 aatttctctagccactaggctacttgaca 27817043  T

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Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 279
Target Start/End: Complemental strand, 33528307 - 33528181
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccg-gacaccc-agttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||| ||||||| ||| || ||||||||||  ||||||| | |||||||| |||||| |||    
T  33528307 gtccccatgagcttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtga 33528208  T
Q  253 atttctctagccactaggctacttgac 279  Q
    |||||||||||||||||||||||||||    
T  33528207 atttctctagccactaggctacttgac 33528181  T

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Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 47864641 - 47864755
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| ||||||| |||||||||||||||||||||| ||  || |||||||||| |||||||| | |||||||| |||||| |||||||||||||||    
T  47864641 ttagctcatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctctagcc 47864740  T
Q  265 actaggctacttgac 279  Q
    |||||||||||||||    
T  47864741 actaggctacttgac 47864755  T

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Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 44062113 - 44062017
Alignment:
Q  185 gataatgcacaatatgtgcagaggccggagttcgaacccggaca-cccagttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| |||| |||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  44062113 gataatgcacaatatgtgcaggggccggagttcgaaccccgacaccccacttattcatctttaaggtgaatgtctctagccactagactacttgaca 44062017  T

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Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 279
Target Start/End: Original strand, 55426107 - 55426229
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacacccagttattcatgtttaagatgaa 253  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||||||||  |||||  ||||||| |||||||||||    | |||| |||||| ||||    
T  55426107 gtccccatgagcttagctcatttggtaaaggataatgcacaatatgtgcatgggccgaggttcgaaccccggacaccc---cactcatctttaaggtgaa 55426203  T
Q  254 tttctctagccactaggctacttgac 279  Q
    ||||||||||||||||||||||||||    
T  55426204 tttctctagccactaggctacttgac 55426229  T

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Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 279
Target Start/End: Original strand, 11483606 - 11483732
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggaca-cccagttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||||||| |||||||||| ||||||||||| |||| | |||||||| ||||||| |||| |||||||| |||||| |||    
T  11483606 gtccccatgagcttagctcatttggtaagggataatgcaaaatatgtgcaggggccagggttcgaactccggacaccccacttattcatctttaaggtga 11483705  T
Q  253 atttctctagccactaggctacttgac 279  Q
    ||||||||||| ||||| |||||||||    
T  11483706 atttctctagcaactagactacttgac 11483732  T

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Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 39739273 - 39739394
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacacc-cagttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||| |   || |||||||||| ||||||| || |||||||| |||||| |||||||||    
T  39739273 atgagcttagctcatttggtaagggataatgcacaatatgtgcagggattggggttcgaaccccggacacctcacttattcatctttaaggtgaatttct 39739372  T
Q  259 ctagccactaggctacttgaca 280  Q
    ||||||||||| ||||||||||    
T  39739373 ctagccactagactacttgaca 39739394  T

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Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 279
Target Start/End: Original strand, 50381707 - 50381833
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc-agttattcatgtttaagatga 252  Q
    ||||| ||||| ||| |||| ||||||| |||||||||||||||| ||||| || ||| ||||||| ||||||||||| | |||||||| |||||| |||    
T  50381707 gtccccatgagcttaactcatttggtaagggataatgcacaatatatgcaggggtcggggttcgaatcccggacaccccacttattcatctttaaggtga 50381806  T
Q  253 atttctctagccactaggctacttgac 279  Q
    ||||||||||||| |||||| ||||||    
T  50381807 atttctctagccattaggctgcttgac 50381833  T

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Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 2259149 - 2259261
Alignment:
Q  154 agtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacacccagttattcatgtttaagatga 252  Q
    |||||| ||||| |||||||| ||||||| |||||||||||||||||||||| ||||||||||| || ||| |||||| | |||||||| |||||| | |    
T  2259149 agtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggagttcaaaccccagacacctacttattcatctttaaggtaa 2259248  T
Q  253 atttctctagcca 265  Q
    |||| ||||||||    
T  2259249 atttatctagcca 2259261  T

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Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 279
Target Start/End: Original strand, 25165434 - 25165563
Alignment:
Q  156 tccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca--cccagttattca---tgtttaaga 249  Q
    |||| ||||| |||||||| ||||||| |||||||||||||||||||||| | |||| ||||||| ||||||||  |||| |||||||   | ||||||     
T  25165434 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggaccggggttcgaaccccggacacccccacttattcatcttttttaagg 25165533  T
Q  250 tgaatttctctagccactaggctacttgac 279  Q
    ||||||||||||||||||||||| ||||||    
T  25165534 tgaatttctctagccactaggctgcttgac 25165563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 279
Target Start/End: Original strand, 46798573 - 46798701
Alignment:
Q  153 tagtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggaca-cccagttattcatgtttaagat 250  Q
    ||||||| ||||| ||| |||| ||||| | |||||||||||||||||||||| ||||||  ||||||||| ||||| |||| |||||||| |||||| |    
T  46798573 tagtccccatgagcttaactcatttggtgagggataatgcacaatatgtgcaggggccgggattcgaaccctggacaccccacttattcatctttaaggt 46798672  T
Q  251 gaatttctctagccactaggctacttgac 279  Q
      ||||||||| |||||||||||||||||    
T  46798673 agatttctctaaccactaggctacttgac 46798701  T

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Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 280
Target Start/End: Original strand, 30162650 - 30162781
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc------cggacacc-cagttattcatgtttaa 247  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||||||||||  |||||| |||||||||      |||||||| || |||||||| |||||    
T  30162650 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaagggccggggttcgaacccgggcacggacacctcacttattcat-tttaa 30162748  T
Q  248 gatgaatttctctagccactaggctacttgaca 280  Q
    | |||||||||||||| ||||||||| ||||||    
T  30162749 ggtgaatttctctagcaactaggctatttgaca 30162781  T

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Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 46247244 - 46247381
Alignment:
Q  146 aaaataatagtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc----agttattca 240  Q
    ||||| |||||||| ||||| |||||||| ||||||| |||||||||||||| ||||||| ||| || ||||||| ||| |||||||      |||||||    
T  46247244 aaaatgatagtccccatgagcttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccccacttcttattca 46247343  T
Q  241 tgtttaagatgaatttctctagccactaggctacttgac 279  Q
    | |||||| ||||||||||| ||||||||||||||||||    
T  46247344 tctttaaggtgaatttctct-gccactaggctacttgac 46247381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 280
Target Start/End: Complemental strand, 31435580 - 31435476
Alignment:
Q  178 ggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggaca-cccagttattcatgtttaagatgaatttctctagccactaggctact 275  Q
    ||||| ||||||||||||||||||| || ||  || ||||||||| |||||| |||| |||||||| |||||| |||||||||||||||||||| |||||    
T  31435580 ggtaagggataatgcacaatatgtgtaggggttggggttcgaacctcggacatcccacttattcatctttaaggtgaatttctctagccactagactact 31435481  T
Q  276 tgaca 280  Q
    |||||    
T  31435480 tgaca 31435476  T

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Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 280
Target Start/End: Complemental strand, 29645889 - 29645802
Alignment:
Q  195 aatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    ||||||||||| |||||| |||||||||| |||||||| | |||||||| |||||| |||||||||||||||||||| ||||||||||    
T  29645889 aatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctctagccactagactacttgaca 29645802  T

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Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 280
Target Start/End: Original strand, 36590383 - 36590515
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-------cggacacc-cagttattcatgttta 246  Q
    ||||| |||||||||||||| ||||||| |||||||| ||||||||||||| |||||  |||||||||       |||||||| || |||||||| ||||    
T  36590383 gtccccatgagattagctcatttggtaagggataatgtacaatatgtgcaggggccgtggttcgaaccccgggcacggacacctcacttattcat-ttta 36590481  T
Q  247 agatgaatttctctagccactaggctacttgaca 280  Q
    || |||||||||||||||||||| ||| ||||||    
T  36590482 aggtgaatttctctagccactagactatttgaca 36590515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 22602293 - 22602179
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacacc-cagttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| ||||||| | ||||||||||||||||| || || ||  ||||||| ||| |||| | || |||||||| |||||| |||||||||||||||    
T  22602293 ttagctcatttggtaaggaataatgcacaatatgtgtaggggacgaggttcgaatcccagacatcgcacttattcatctttaaggtgaatttctctagcc 22602194  T
Q  265 actaggctacttgac 279  Q
    |||||||||||||||    
T  22602193 actaggctacttgac 22602179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 9321055 - 9320934
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc-agttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||| ||| |||||||| ||||| ||||||| ||  || ||||||| |||| |||||| | |||||||| || |||||||||||||    
T  9321055 atgagtttagctcatttgataagggataatgtacaatttgtgcaggggttggggttcgaaacccgaacaccccacttattcatcttaaagatgaatttct 9320956  T
Q  259 ctagccactaggctacttgaca 280  Q
    ||| ||||||||||||||||||    
T  9320955 ctaaccactaggctacttgaca 9320934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 280
Target Start/End: Original strand, 32421340 - 32421468
Alignment:
Q  154 agtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggacaccc-agttattcatgtttaagatg 251  Q
    |||||| ||||| ||||||||  |||||| |||||||||| ||||| ||||| || ||| ||||||||| || || ||| | |||||||| |||||||||    
T  32421340 agtccccatgagcttagctcatctggtaagggataatgcataatatatgcaggggtcggggttcgaacctcgaactccccacttattcatctttaagatg 32421439  T
Q  252 aatttctctagccactaggctacttgaca 280  Q
    ||||| |||||||||||  ||||||||||    
T  32421440 aatttttctagccactaaactacttgaca 32421468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 29226320 - 29226427
Alignment:
Q  156 tccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaa 253  Q
    |||| ||||| |||||||| ||||||| ||||||  |||||||||||||| |||||| ||||||| |||| ||| |||| |||||||| |||||| ||||    
T  29226320 tccccatgagcttagctcatttggtaagggataacacacaatatgtgcaggggccggggttcgaaccccgtacaccccacttattcatctttaaggtgaa 29226419  T
Q  254 tttctcta 261  Q
    ||||||||    
T  29226420 tttctcta 29226427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 1102786 - 1102672
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttctctagcc 264  Q
    ||||||||  |||||| |||||||||| ||| | ||||| || |||||||||||||  |||||||| | |||||||  |||||| |||||||||||||||    
T  1102786 ttagctcacctggtaagggataatgcataatttatgcaggggacggagttcgaaccatggacaccccacttattcacctttaaggtgaatttctctagcc 1102687  T
Q  265 actaggctacttgac 279  Q
     ||||||||||||||    
T  1102686 gctaggctacttgac 1102672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 27471513 - 27471623
Alignment:
Q  171 ctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttctctagccacta 268  Q
    |||| ||||||| |||||||||| ||||||| ||| ||  || |||||||||| |||||||| | |||||||| |||||| | |||||||||||||||||    
T  27471513 ctcatttggtaagggataatgcataatatgtacaggggttggggttcgaaccccggacaccccacttattcatctttaaggtaaatttctctagccacta 27471612  T
Q  269 ggctacttgac 279  Q
    | |||||||||    
T  27471613 gactacttgac 27471623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 1325413 - 1325306
Alignment:
Q  176 ttggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc--agttattcatgtttaagatgaatttctctagccactaggct 272  Q
    ||||||| |||||||||||||||| | ||| |  |||  ||||||||| ||||||||  | |||||||| |||||||||||||||| |||||||||| ||    
T  1325413 ttggtaagggataatgcacaatatatacagggatcgggattcgaaccccggacacccccatttattcatctttaagatgaatttctttagccactagact 1325314  T
Q  273 acttgaca 280  Q
    ||||||||    
T  1325313 acttgaca 1325306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 38668135 - 38668247
Alignment:
Q  169 agctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctctagccac 266  Q
    |||||| ||||||| ||||||||||||||| ||| || ||  ||||||  || ||| |||| |||| |||||||| |||||| |||||||||||||||||    
T  38668135 agctcatttggtaagggataatgcacaatacgtgtaggggttggagttgaaatccctgacaccccacttattcatctttaaggtgaatttctctagccac 38668234  T
Q  267 taggctacttgac 279  Q
    ||| |||||||||    
T  38668235 tagactacttgac 38668247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 279
Target Start/End: Original strand, 166788 - 166907
Alignment:
Q  162 tgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccg-gacacc-cagttattcatgtttaagatgaatttctc 259  Q
    |||| |||||||| ||||||| |||||||||| ||| | ||||| |||||| ||||||||||  |||||| || |||||||  |||||  |||||||||     
T  166788 tgagcttagctcacttggtaagggataatgcataatttatgcaggggccggggttcgaaccccagacacctcacttattcacctttaaagtgaatttctt 166887  T
Q  260 tagccactaggctacttgac 279  Q
    ||||| ||||||||||||||    
T  166888 tagccgctaggctacttgac 166907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 8258145 - 8258213
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc 223  Q
    ||||| ||||| ||| |||| ||||||| || ||||||||||||||||||| || ||||||||||||||    
T  8258145 gtccccatgagcttaactcatttggtaatggttaatgcacaatatgtgcaggggtcggagttcgaaccc 8258213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 986000 - 985894
Alignment:
Q  176 ttggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc-agttattcatgtttaagatgaatttctctagccactaggcta 273  Q
    ||||||| | |||||||||||| ||||||| ||| || ||  ||| ||||||||||| | |||||||| || ||| ||||||||||||||||||||  ||    
T  986000 ttggtaaggcataatgcacaatttgtgcaggggctggggtctgaatcccggacaccccacttattcatcttaaaggtgaatttctctagccactagatta 985901  T
Q  274 cttgaca 280  Q
    |||||||    
T  985900 cttgaca 985894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 280
Target Start/End: Original strand, 27394515 - 27394627
Alignment:
Q  169 agctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttctctagccac 266  Q
    |||||| ||||||| ||||||||||   ||| ||||| ||| || ||| |||||| |||||||| | |||||||  |||||| ||||||||||||||| |    
T  27394515 agctcacttggtaagggataatgcatt-tatatgcaggggctggggtttgaaccccggacaccccacttattcacctttaaggtgaatttctctagccgc 27394613  T
Q  267 taggctacttgaca 280  Q
    ||||||||||||||    
T  27394614 taggctacttgaca 27394627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 34225194 - 34225238
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcag 205  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||    
T  34225194 atgagcttagctcatttggtaagggataatgcacaatatgtgcag 34225238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 276
Target Start/End: Original strand, 45431619 - 45431743
Alignment:
Q  154 agtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatg 251  Q
    |||||| ||||| |||||||| ||||||| |||||||||  | | | ||||| || | | |||||||||| |||||||| | |||||||  |||||| ||    
T  45431619 agtccccatgagcttagctcacttggtaagggataatgcgtattttatgcaggggtcagggttcgaaccccggacaccccacttattcacctttaaggtg 45431718  T
Q  252 aatttctctagccactaggctactt 276  Q
    |||||| |||||| |||||||||||    
T  45431719 aatttccctagccgctaggctactt 45431743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 54457213 - 54457273
Alignment:
Q  221 cccggacaccc-agttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    ||||||||||| | |||||||  |||||| ||||||||||||||| |||||||||||||||    
T  54457213 cccggacaccccatttattcacctttaaggtgaatttctctagccgctaggctacttgaca 54457273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 1084131 - 1084080
Alignment:
Q  154 agtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcag 205  Q
    |||||| ||||| |||||||| ||| |||||||||||| |||||||||||||    
T  1084131 agtccccatgagcttagctcatttgttaaaggataatgtacaatatgtgcag 1084080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 280
Target Start/End: Original strand, 7517945 - 7518060
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccgga-caccc-agttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| ||||||| ||||| |||||||| |||||||  ||||  |||||||||| || ||||| | |||| ||| || ||  |||||| ||||||||    
T  7517945 ttagctcatttggtaagggatattgcacaatttgtgcaggagccgcggttcgaaccccgaacaccccacttatccatcttaaaagtgaattcctctagcc 7518044  T
Q  265 actaggctacttgaca 280  Q
    | ||||||||||||||    
T  7518045 attaggctacttgaca 7518060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 279
Target Start/End: Complemental strand, 16141455 - 16141329
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggacaccc-agttattcatgtttaagatga 252  Q
    ||||| |||||  ||| ||| ||| ||| |||||||||||||||||| ||  ||| || |||||||| || ||||||| | |||||||| || ||| | |    
T  16141455 gtccccatgagcatagttcatttgataagggataatgcacaatatgtacaagggctggggttcgaactccagacaccccacttattcatcttaaaggtaa 16141356  T
Q  253 atttctctagccactaggctacttgac 279  Q
    |||| |||| |||||||||||||||||    
T  16141355 atttatctaaccactaggctacttgac 16141329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 36763460 - 36763551
Alignment:
Q  190 tgcacaatatgtgcagaggccggagttcgaacccggaca-cccagttattcatgttt---aagatgaatttctctagccactaggctacttgac 279  Q
    |||| ||||| ||||| |||||||||| ||||||||||| |||| |||||||| |||   ||| ||||||  |||||||||||| |||||||||    
T  36763460 tgcataatatatgcaggggccggagtttgaacccggacaccccacttattcatctttaaaaaggtgaatt--tctagccactagactacttgac 36763551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 50332979 - 50332935
Alignment:
Q  234 ttattcatgtttaagatgaatttctctagccactaggctacttga 278  Q
    |||||||  |||||||||||||||||||||| |||| ||||||||    
T  50332979 ttattcacctttaagatgaatttctctagccgctagactacttga 50332935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 34107483 - 34107614
Alignment:
Q  150 taatagtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccggaca-cccagttattcatgtttaag 248  Q
    |||| ||||||||||| |||||||| ||||||| |||||||||||||||||||||| || | | |||| |||||||||| |||| |||||||| ||||||    
T  34107483 taatcgtccctatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcagggttcaaacccggacaccccacttattcatctttaag 34107582  T
Q  249 atgaatttctctagccactaggctacttgaca 280  Q
     |||||||||||||||||||||||||||||||    
T  34107583 gtgaatttctctagccactaggctacttgaca 34107614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 17543171 - 17543065
Alignment:
Q  176 ttggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggaca-cccagttattcatgtttaagatgaatttctctagccactaggcta 273  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| |||| |||||||| |||||  ||| |||||||| |||||||||||    
T  17543171 ttggtaagggataatgcacaatatgtgcaggggccggagttcgaacgccggacaccccacttattcatctttaatgtgactttctctaaccactaggcta 17543072  T
Q  274 cttgaca 280  Q
    |||||||    
T  17543071 cttgaca 17543065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 280
Target Start/End: Original strand, 41749940 - 41750066
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacacccagttattcatgtttaagatgaa 253  Q
    ||||| ||||| | |||||| |||| || |||||||||||||| |||| || || ||| ||| |||||| ||||||||| |||||||| |||||| ||||    
T  41749940 gtccccatgagctaagctcatttggcaagggataatgcacaatgtgtgtaggggtcggggtttgaaccccggacacccacttattcatctttaaggtgaa 41750039  T
Q  254 tttctctagccactaggctacttgaca 280  Q
    |||||||||||||||||||||||||||    
T  41750040 tttctctagccactaggctacttgaca 41750066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 3330279 - 3330176
Alignment:
Q  179 gtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctctagccactaggctactt 276  Q
    |||| ||||||||||||||||||||||||| ||||||||||| |||||||| |||| |||||||| |||||| |||||||||||| |||||| |||| ||    
T  3330279 gtaagggataatgcacaatatgtgcagaggtcggagttcgaaccccggacaccccacttattcatctttaaggtgaatttctctaaccactaagctattt 3330180  T
Q  277 gaca 280  Q
    ||||    
T  3330179 gaca 3330176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 276
Target Start/End: Complemental strand, 18424245 - 18424131
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggaca-cccagttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||||||| |   |||||||||||||||||| |||||| |||||||| ||||||| |||| |||||||| |||||| |||||||||    
T  18424245 atgagcttagctcatttggtaagg---aatgcacaatatgtgcaggggccggggttcgaactccggacatcccacttattcatctttaaggtgaatttct 18424149  T
Q  259 ctagccactaggctactt 276  Q
    ||||||||||||||||||    
T  18424148 ctagccactaggctactt 18424131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 279
Target Start/End: Complemental strand, 33065353 - 33065233
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggacaccc-agttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| |||| || |||||||||||||| |||| || || ||| |||||||| ||| |||||| | |||||||| |||||| |||||||||    
T  33065353 atgagcttagctcatttggcaagggataatgcacaatgtgtgtaggggtcggggttcgaactccgaacaccctacttattcatctttaaggtgaatttct 33065254  T
Q  259 ctagccactaggctacttgac 279  Q
    |||||||||||||||||||||    
T  33065253 ctagccactaggctacttgac 33065233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 280
Target Start/End: Original strand, 6866517 - 6866628
Alignment:
Q  171 ctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacacc-cagttattcatgtttaagatgaatttctctagccacta 268  Q
    |||| ||||||| ||||||||||||||||||||||   |||||||||||| |||||||||| || ||||| || |||||| ||||||||| |||||| ||    
T  6866517 ctcatttggtaagggataatgcacaatatgtgcaggaaccggagttcgaatcccggacacctcacttatttatctttaaggtgaatttctttagccagta 6866616  T
Q  269 ggctacttgaca 280  Q
    | ||||||||||    
T  6866617 gactacttgaca 6866628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 268
Target Start/End: Complemental strand, 25553249 - 25553133
Alignment:
Q  153 tagtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccggacac-ccagttattcatgtttaagatg 251  Q
    ||||||| ||||| |||  ||| ||||||| ||||||||||||||||||||||||   || |||||||| | || || ||| |||||||| |||||||||    
T  25553249 tagtccccatgagcttaattcatttggtaagggataatgcacaatatgtgcagagattggggttcgaactcagatactccacttattcatctttaagatg 25553150  T
Q  252 aatttctctagccacta 268  Q
    |||||||||| ||||||    
T  25553149 aatttctctaaccacta 25553133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 268
Target Start/End: Complemental strand, 11069441 - 11069336
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacacccagttattcatgtttaagatgaatttctc 259  Q
    ||||| |||||||| ||||||| | |||||||||||||||||||| |   || |||||||||| ||||||||   || |||| |||||||||||||||||    
T  11069441 atgagcttagctcatttggtaaggaataatgcacaatatgtgcagggtttggggttcgaaccctggacaccc---tactcatctttaagatgaatttctc 11069345  T
Q  260 tagccacta 268  Q
    |||||||||    
T  11069344 tagccacta 11069336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 42678405 - 42678299
Alignment:
Q  176 ttggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttctctagccactaggcta 273  Q
    ||||||| ||||||||||||||||| | || |  |||||||||||||| |||||||| | |||||||| |||||| |||||||||||| |||||||  ||    
T  42678405 ttggtaagggataatgcacaatatgcgtagggatcggagttcgaaccccggacaccccacttattcatctttaaggtgaatttctctaaccactagatta 42678306  T
Q  274 cttgaca 280  Q
    |||||||    
T  42678305 cttgaca 42678299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 280
Target Start/End: Original strand, 29090460 - 29090535
Alignment:
Q  207 ggccggagttcgaaccc-ggacacc-cagttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    ||||||||||||||||| ||||||| || |||||||| |||||| |||||||||| |||| |||||||||||||||    
T  29090460 ggccggagttcgaaccccggacacctcacttattcatctttaaggtgaatttctccagccgctaggctacttgaca 29090535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 278
Target Start/End: Complemental strand, 5901910 - 5901808
Alignment:
Q  178 ggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttctctagccactaggctact 275  Q
    ||||| |||||||||||||| | ||||| |||||| || | ||||| |||||||| | |||||||| || ||| ||||||||| ||||||||||||||||    
T  5901910 ggtaagggataatgcacaatttctgcaggggccggggtacaaaccccggacaccccacttattcatcttaaaggtgaatttctttagccactaggctact 5901811  T
Q  276 tga 278  Q
    |||    
T  5901810 tga 5901808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 27463622 - 27463504
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccgga-cacccagttattcatgtttaagatgaatttctc 259  Q
    ||||| |||||||| ||||||| | |||||||||||||| |||||  |||||  ||||||||| ||  ||||| |||||||| |||||  ||||||||||    
T  27463622 atgagcttagctcatttggtaaggaataatgcacaatatatgcaggagccgggattcgaacccagataacccacttattcatctttaaagtgaatttctc 27463523  T
Q  260 tagccactaggctacttga 278  Q
    || |||||||  |||||||    
T  27463522 taaccactagattacttga 27463504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 18949780 - 18949660
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccgga-cacccag-ttattcatgtttaagatgaatttct 258  Q
    ||||| ||| |||| ||| ||| ||||||||||  |||||||||| || ||| |||||||||| || ||||||  |||||||| |||||  |||||||||    
T  18949780 atgagcttaactcatttgataacggataatgcattatatgtgcaggggtcggggttcgaaccctgaacacccaacttattcat-tttaatgtgaatttct 18949682  T
Q  259 ctagccactaggctacttgaca 280  Q
    ||||||||||| ||||||||||    
T  18949681 ctagccactagactacttgaca 18949660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 276
Target Start/End: Complemental strand, 19843459 - 19843342
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccg-gacacc-cagttattcatgtttaagatgaatttct 258  Q
    ||||| ||| |||| || |||| |||| ||| ||||||||||||| || | | ||||||||||  |||||| || |||||||| |||||| |||||||||    
T  19843459 atgagcttaactcatttcgtaagggatgatgtacaatatgtgcaggggtcagggttcgaaccctagacacctcacttattcatctttaaggtgaatttct 19843360  T
Q  259 ctagccactaggctactt 276  Q
    ||||| ||||||||||||    
T  19843359 ctagctactaggctactt 19843342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 279
Target Start/End: Original strand, 43027149 - 43027274
Alignment:
Q  156 tccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccg-gacaccc-agttattcatgtttaagatgaa 253  Q
    |||| ||||| |||||||| ||| ||| |||||||||||||| ||||| |  || |  ||||||||||  ||||||| | |||||||  |||||| ||||    
T  43027149 tccccatgagcttagctcatttgataagggataatgcacaatttgtgcgggtgctgaggttcgaaccccagacaccccatttattcacctttaaggtgaa 43027248  T
Q  254 tttctctagccactaggctacttgac 279  Q
    |||||||||||||||| |||||||||    
T  43027249 tttctctagccactagactacttgac 43027274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 280
Target Start/End: Complemental strand, 33482732 - 33482617
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggacaccc-agttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| ||||||| | || ||||||||||| ||||| | |||  ||||||||| | ||||||| | |||||||| ||||||||||||||||||| ||    
T  33482732 ttagctcatttggtaaggaatgatgcacaatatatgcagggaccgtggttcgaacctcagacaccccacttattcatctttaagatgaatttctctaacc 33482633  T
Q  265 actaggctacttgaca 280  Q
    |  || ||||||||||    
T  33482632 atcagactacttgaca 33482617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 280
Target Start/End: Complemental strand, 31149190 - 31149077
Alignment:
Q  168 tagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctctagcca 265  Q
    ||||||| ||||||| |||||||||||||||||||||| ||  |  ||||||| ||| |||| |||| || || || |||||| |||||||||||| |||    
T  31149190 tagctcatttggtaagggataatgcacaatatgtgcag-ggttgaggttcgaaccccagacaccccactttttaatctttaaggtgaatttctctaacca 31149092  T
Q  266 ctaggctacttgaca 280  Q
    || ||||||||||||    
T  31149091 cttggctacttgaca 31149077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 16403524 - 16403573
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggcc 210  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||| ||||    
T  16403524 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggcc 16403573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 33613652 - 33613580
Alignment:
Q  210 cggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||||||||||||| |||||||| | |||||||  |||||| |||||||||||||| |||| |||||||||||    
T  33613652 cggagttcgaaccccggacaccccacttattcacctttaagttgaatttctctagctactatgctacttgaca 33613580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 280
Target Start/End: Original strand, 1962835 - 1962945
Alignment:
Q  171 ctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggaca-cccagttattcatgtttaagatgaatttctctagccacta 268  Q
    |||| |||||||||||||||||| | | | ||||| || ||  |||||||| ||||||| |||| |||||||| |||||| |||| |||||||| | |||    
T  1962835 ctcacttggtaaaggataatgcatattgtatgcaggggtcgaggttcgaactccggacaccccacttattcatctttaaggtgaa-ttctctagtcgcta 1962933  T
Q  269 ggctacttgaca 280  Q
    ||||||||||||    
T  1962934 ggctacttgaca 1962945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 5207161 - 5207212
Alignment:
Q  229 cccagttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||| |||||||  |||||||||||||||| |||||||||| ||||||||||    
T  5207161 cccacttattcacctttaagatgaatttctttagccactagactacttgaca 5207212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 280
Target Start/End: Original strand, 31605572 - 31605618
Alignment:
Q  234 ttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||||||  ||||||||||||||||||| ||||||| ||||||||||    
T  31605572 ttattcacatttaagatgaatttctctacccactagactacttgaca 31605618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 280
Target Start/End: Original strand, 38413030 - 38413075
Alignment:
Q  234 ttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||    
T  38413030 ttattcatctttaaggtgaatttctcta-ccactaggctacttgaca 38413075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 280
Target Start/End: Complemental strand, 4632081 - 4632044
Alignment:
Q  243 tttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  4632081 tttaaggtgaatttctctagccactaggctatttgaca 4632044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 20435781 - 20435900
Alignment:
Q  162 tgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggaca-cccagttattcatgtttaagatgaatttctc 259  Q
    |||| |||||||| ||||||| ||||| |||| | | | ||||  | |||| ||||||||| |||||| |||| |||||||| |||||| ||||||||||    
T  20435781 tgagcttagctcacttggtaagggatattgcatattttatgcaaggcccggggttcgaacctcggacatcccacttattcatctttaaggtgaatttctc 20435880  T
Q  260 tagccactaggctacttgaca 280  Q
    ||  | |||||||||||||||    
T  20435881 ta-tcgctaggctacttgaca 20435900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 42541238 - 42541274
Alignment:
Q  243 tttaagatgaatttctctagccactaggctacttgac 279  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  42541238 tttaaggtgaatttctctagccgctaggctacttgac 42541274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 42998718 - 42998754
Alignment:
Q  243 tttaagatgaatttctctagccactaggctacttgac 279  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  42998718 tttaaggtgaatttctctagccgctaggctacttgac 42998754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 155 - 279
Target Start/End: Complemental strand, 6228362 - 6228236
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||||||||||| |||||| ||||||| |||||||| |||| |||||||| |||||| |||    
T  6228362 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtga 6228263  T
Q  253 atttctctagccactaggctacttgac 279  Q
    |||||||||||||||||||||||||||    
T  6228262 atttctctagccactaggctacttgac 6228236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 152 - 279
Target Start/End: Complemental strand, 18903472 - 18903343
Alignment:
Q  152 atagtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaaga 249  Q
    |||||||| ||||| |||||||| |||| || ||||||| |||||||||||||| |||||| ||||||| |||||||| |||| |||||||| ||||||     
T  18903472 atagtccccatgagcttagctcatttggcaagggataatacacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaagg 18903373  T
Q  250 tgaatttctctagccactaggctacttgac 279  Q
    ||||||||||||||||||||||||||||||    
T  18903372 tgaatttctctagccactaggctacttgac 18903343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 17216957 - 17217078
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggacaccc-agttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||||||| |||||||||| |||||||| || || |||||||||||| |||||||||| | |||||||| |||||| |||||||||    
T  17216957 atgagcttagctcatttggtaagggataatgcataatatgtgtaggggtcggagttcgaactccggacaccccacttattcatctttaaggtgaatttct 17217056  T
Q  259 ctagccactaggctacttgaca 280  Q
    ||||||||||||||||||||||    
T  17217057 ctagccactaggctacttgaca 17217078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 156 - 279
Target Start/End: Complemental strand, 20415663 - 20415538
Alignment:
Q  156 tccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaa 253  Q
    |||| ||||| |||||||| || |||| |||||||||||||||||||||| |||| | ||||||| |||||||| |||| |||||||| |||||| ||||    
T  20415663 tccccatgagtttagctcattttgtaagggataatgcacaatatgtgcaggggccagggttcgaaccccggacaccccacttattcatctttaaggtgaa 20415564  T
Q  254 tttctctagccactaggctacttgac 279  Q
    ||||||||||||||||||| ||||||    
T  20415563 tttctctagccactaggctgcttgac 20415538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 24794994 - 24794881
Alignment:
Q  158 cctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatt 255  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||| ||  ||  |||||| |||||||| |||| |||||||| |||||||||||||    
T  24794994 cctatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggttgggattcgaaccccggacatcccacttattcatatttaagatgaatt 24794895  T
Q  256 tctctagccactag 269  Q
    ||||||||||||||    
T  24794894 tctctagccactag 24794881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 280
Target Start/End: Complemental strand, 15717115 - 15716983
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-------cggacacc-cagttattcatgttta 246  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||||||||||| |||||| |||||||||       |||||||| || |||||||| ||||    
T  15717115 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccgggcacggacacctcacttattcat-ttta 15717017  T
Q  247 agatgaatttctctagccactaggctacttgaca 280  Q
    || |||||||||||||||||||||||| ||||||    
T  15717016 aggtgaatttctctagccactaggctatttgaca 15716983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 167 - 280
Target Start/End: Complemental strand, 29322066 - 29321951
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctctagcc 264  Q
    |||| ||| ||||||| |||||||||||||||||||||| ||| || ||||||| ||| |||| |||| ||||| || |||||| |||||||||||||||    
T  29322066 ttagatcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacatcccacttatttatctttaaggtgaatttctctagcc 29321967  T
Q  265 actaggctacttgaca 280  Q
    ||||| ||||||||||    
T  29321966 actagactacttgaca 29321951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 276
Target Start/End: Complemental strand, 7955003 - 7954901
Alignment:
Q  176 ttggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccgga-ca-cccagttattcatgtttaagatgaatttctctagccactaggcta 273  Q
    ||||||| |||||||||||||||||||||| || ||  || ||||||| || || |||| |||||||| |||||||||||||||||||||||||||||||    
T  7955003 ttggtaagggataatgcacaatatgtgcagggggcgaggtgcgaaccccgaacatcccacttattcatctttaagatgaatttctctagccactaggcta 7954904  T
Q  274 ctt 276  Q
    |||    
T  7954903 ctt 7954901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 280
Target Start/End: Original strand, 19748104 - 19748218
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggaca-cccagttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| ||||||| |||||||||||||||||||||| |   || ||||||||| |||||| |||| |||||||| |||||| |||||||||||  ||    
T  19748104 ttagctcatttggtaagggataatgcacaatatgtgcagggattggggttcgaaccacggacaccccacttattcat-tttaaggtgaatttctctgacc 19748202  T
Q  265 actaggctacttgaca 280  Q
    ||||||||||||||||    
T  19748203 actaggctacttgaca 19748218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 280
Target Start/End: Complemental strand, 30422216 - 30422083
Alignment:
Q  148 aataatagtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggacacc-cagttattcatgttt 245  Q
    |||| ||||||| ||||| ||| |||| ||||||| |||||||| |||||||||| || || | | |||||||| ||||||||| || ||||| || |||    
T  30422216 aatagtagtccc-atgagcttaactcatttggtaagggataatgtacaatatgtgtaggggtccgggttcgaactccggacaccacatttatttattttt 30422118  T
Q  246 aagatgaatttctctagccactaggctacttgaca 280  Q
    ||| ||||||||||| |||||||||||||||||||    
T  30422117 aaggtgaatttctctggccactaggctacttgaca 30422083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 280
Target Start/End: Complemental strand, 5641775 - 5641665
Alignment:
Q  171 ctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggacaccc-agttattcatgtttaagatgaatttctctagccacta 268  Q
    |||| ||||||| |||||||||| ||| | ||||| | |||| |||||||| |||||||||| | |||||||  |||||| ||||||||||||||| |||    
T  5641775 ctcacttggtaatggataatgcataatttatgcag-gaccggggttcgaactccggacaccccacttattcacctttaaggtgaatttctctagccgcta 5641677  T
Q  269 ggctacttgaca 280  Q
    | ||||||||||    
T  5641676 gactacttgaca 5641665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 11552876 - 11552990
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc--ggacacccagttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| |||| || |||||| | ||||| ||||||| |||||| ||||||||||  ||   |||| |||||||| |||||| | ||||| |||||||    
T  11552876 ttagctcatttggcaagggataacgtacaatgtgtgcaggggccggggttcgaaccccaggcaccccacttattcatctttaaggtaaatttttctagcc 11552975  T
Q  265 actaggctacttgac 279  Q
    ||||| |||||||||    
T  11552976 actagtctacttgac 11552990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 280
Target Start/End: Complemental strand, 3200104 - 3200058
Alignment:
Q  234 ttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||||||| |||||| |||||||||||||||| ||||||||||||||    
T  3200104 ttattcatctttaaggtgaatttctctagccaataggctacttgaca 3200058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 267
Target Start/End: Original strand, 31637353 - 31637451
Alignment:
Q  171 ctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggacaccc-agttattcatgtttaagatgaatttctctagccact 267  Q
    |||| ||||||  |||||||||||||||| ||||| || ||| |||||| || ||||||||| | ||||| || |||||| ||||||||||||||||||    
T  31637353 ctcatttggtatgggataatgcacaatatttgcaggggtcggggttcgagcctcggacaccctacttatttatttttaaggtgaatttctctagccact 31637451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 19221699 - 19221820
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggacaccc-agttattcatgtttaagatgaatttct 258  Q
    ||||| ||| |||| ||||| ||| |||||||| || |||||||| ||| |  |||||||| || ||||||| | || ||||| |||||| |||||||||    
T  19221699 atgagtttaactcatttggtgaagaataatgcataacatgtgcaggggctgaggttcgaactccagacaccccatttgttcatttttaaggtgaatttct 19221798  T
Q  259 ctagccactaggctacttgaca 280  Q
    |||||||||||  |||||||||    
T  19221799 ctagccactagattacttgaca 19221820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 2471647 - 2471599
Alignment:
Q  101 agtaatgcaggaaagaaagaaagaaatataacctatctaaaaaagaaaa 149  Q
    |||| |||||||||||||| |||| |||||||||||| |||||||||||    
T  2471647 agtagtgcaggaaagaaagcaagatatataacctatccaaaaaagaaaa 2471599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 268
Target Start/End: Complemental strand, 25091189 - 25091086
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggacaccc-agttattcatgtttaagatgaatttctctagcc 264  Q
    |||| ||| |||| ||||||||||||||||| ||| ||| | |||| ||||| ||| ||||||||| | |||||||| || ||| ||| |||||||||||    
T  25091189 ttagttcatttggcaaaggataatgcacaatttgttcagggaccggggttcgtacctcggacaccccacttattcatcttaaaggtgattttctctagcc 25091090  T
Q  265 acta 268  Q
    ||||    
T  25091089 acta 25091086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 2471784 - 2471746
Alignment:
Q  8 tcacatgcttgcgatgtagtgagctaatgatggtggttt 46  Q
    |||||||||||| || |||||||||||||||||||||||    
T  2471784 tcacatgcttgcaatatagtgagctaatgatggtggttt 2471746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 279
Target Start/End: Original strand, 3974466 - 3974560
Alignment:
Q  187 taatgcacaatatgtgcagaggccggagttcgaacc-cggacaccc-agttattcatgtttaagatgaatttctctagccactaggctacttgac 279  Q
    ||||||| ||||||||||| || ||| ||||||||  ||||| ||| | |||||||| |||||| |||||||||||| | ||||||||| |||||    
T  3974466 taatgcagaatatgtgcaggggtcggggttcgaacttcggactccccacttattcatctttaaggtgaatttctctaactactaggctatttgac 3974560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 7164739 - 7164812
Alignment:
Q  207 ggccggagttcgaacccggaca--cccagttattcatgtttaagatgaatttctctagccactaggctacttga 278  Q
    ||||||||||||||||| |||   |||| |||||||  |||||| ||||||||||||||| |||| ||||||||    
T  7164739 ggccggagttcgaaccccgaccaccccacttattcacctttaaggtgaatttctctagccgctagactacttga 7164812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 18618641 - 18618595
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgt 201  Q
    ||||| ||||| |||||||| |||||||| |||||||||||||||||    
T  18618641 gtccccatgagcttagctcatttggtaaaagataatgcacaatatgt 18618595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 21874307 - 21874258
Alignment:
Q  171 ctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa 220  Q
    |||| ||||||| |||||||||||||||||||||  ||| ||||||||||    
T  21874307 ctcatttggtaagggataatgcacaatatgtgcatgggcaggagttcgaa 21874258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 9763517 - 9763553
Alignment:
Q  243 tttaagatgaatttctctagccactaggctacttgac 279  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  9763517 tttaaggtgaatttctctagccactatgctacttgac 9763553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 11611421 - 11611489
Alignment:
Q  214 gttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||||||||| |||||||| | |||||||| |||||  |||||||||||||| | ||||||||||||||    
T  11611421 gttcgaaccctggacaccccacttattcatctttaatgtgaatttctctagcaattaggctacttgaca 11611489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 25045739 - 25045783
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcag 205  Q
    ||||| |||||||| ||||||| ||||||| ||||||||||||||    
T  25045739 atgagcttagctcatttggtaagggataattcacaatatgtgcag 25045783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 155 - 280
Target Start/End: Original strand, 419705 - 419832
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||||||| |||||||| ||||||||||||| |||||| ||||||| |||||||| |||| |||||||| |||||| |||    
T  419705 gtccccatgagcttagctcatttggtaagggataatgaacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtga 419804  T
Q  253 atttctctagccactaggctacttgaca 280  Q
    ||||||||||||||||||||||||||||    
T  419805 atttctctagccactaggctacttgaca 419832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 8e-33; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 39104607 - 39104726
Alignment:
Q  162 tgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacacccagttattcatgtttaagatgaatttctct 260  Q
    |||| |||||||| ||||||| |||||||||||||||||||||| |||||| ||||||| |||||||||||| |||||||| |||||| || ||||||||    
T  39104607 tgagtttagctcatttggtaagggataatgcacaatatgtgcagcggccggggttcgaaccccggacacccacttattcatctttaaggtggatttctct 39104706  T
Q  261 agccactaggctacttgaca 280  Q
    ||||||||| ||||||||||    
T  39104707 agccactagactacttgaca 39104726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 4259858 - 4259979
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttct 258  Q
    ||||| ||| |||| ||||||| |||||||||||||||||||||| |||||| |||| ||||| |||| ||| | |||||||| |||||| |||||||||    
T  4259858 atgagcttaactcatttggtaagggataatgcacaatatgtgcaggggccggggttccaaccccggactccccacttattcatctttaaggtgaatttct 4259957  T
Q  259 ctagccactaggctacttgaca 280  Q
    ||||||||||||||||||||||    
T  4259958 ctagccactaggctacttgaca 4259979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 280
Target Start/End: Complemental strand, 5904464 - 5904349
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| |||||||| ||||||||||||||||||||| || ||| ||||||| |||||||| |||| |||||||| |||||||||||||||||||||     
T  5904464 ttagctcatttggtaaaagataatgcacaatatgtgcaggggacggggttcgaaccccggacatcccacttattcatctttaagatgaatttctctagct 5904365  T
Q  265 actaggctacttgaca 280  Q
    |||| |||| ||||||    
T  5904364 actaagctatttgaca 5904349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 22652682 - 22652803
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||| ||| |||||||||| ||| ||||||| |||||| |||||||||| |||||||| | ||||||||||| ||| |||||||||    
T  22652682 atgagcttagctcatttgataagggataatgcataatttgtgcaggggccggtgttcgaaccccggacaccccaattattcatgttaaaggtgaatttct 22652781  T
Q  259 ctagccactaggctacttgaca 280  Q
    |||||||||| |||||||||||    
T  22652782 ctagccactaagctacttgaca 22652803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 41454929 - 41454816
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||||||||||| |||||| ||||||| |||||||| |||| |||||||| |||||  |||    
T  41454929 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaatgtga 41454830  T
Q  253 atttctctagccac 266  Q
    ||||||||||||||    
T  41454829 atttctctagccac 41454816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 280
Target Start/End: Complemental strand, 13906728 - 13906596
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-------cggacacc-cagttattcatgttta 246  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||||||||||| |||||| |||||||||       |||||||| || |||||||| ||||    
T  13906728 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccgggcacggacacctcacttattcat-ttta 13906630  T
Q  247 agatgaatttctctagccactaggctacttgaca 280  Q
    || |||||||||||||||||||||||| ||||||    
T  13906629 aggtgaatttctctagccactaggctatttgaca 13906596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 280
Target Start/End: Complemental strand, 38289325 - 38289210
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggaca-cccagttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| ||||||| |||||||||||||||||||||| || ||| ||||||||| |  ||| |||| |||||||| |||||| |||||||||||||||    
T  38289325 ttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaacctcaaacaccccacttattcatctttaaggtgaatttctctagcc 38289226  T
Q  265 actaggctacttgaca 280  Q
    |||| |||||||||||    
T  38289225 actaagctacttgaca 38289210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 156 - 267
Target Start/End: Original strand, 1032564 - 1032677
Alignment:
Q  156 tccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaa 253  Q
    |||| ||||| |||||||| ||||||| |||||||||||||||||||||| ||| || ||||||| ||| |||| |||| |||||||| |||||| ||||    
T  1032564 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaa 1032663  T
Q  254 tttctctagccact 267  Q
    ||||||||||||||    
T  1032664 tttctctagccact 1032677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 1360230 - 1360110
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| |||| |||||||||||||||||||||| || ||| || ||||||| |||||||| |||| |||||||| |||||  |||||||||    
T  1360230 atgagcttagctcatttggcaaaggataatgcacaatatgtgtaggggctggggttcgaaccccggacaccccacttattcat-tttaaagtgaatttct 1360132  T
Q  259 ctagccactaggctacttgaca 280  Q
    ||| ||||||||||||||||||    
T  1360131 ctaaccactaggctacttgaca 1360110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 280
Target Start/End: Complemental strand, 8349573 - 8349458
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggacaccc-agttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| |||||||  |||||| || ||||| ||||| ||||||||||||||| ||| |||||| | |||||||| |||||||||||||| |||| ||    
T  8349573 ttagctcatttggtaagtgataatacagaatatatgcaggggccggagttcgaactccgaacaccccacttattcatctttaagatgaatttatctaacc 8349474  T
Q  265 actaggctacttgaca 280  Q
    ||||| ||||||||||    
T  8349473 actagactacttgaca 8349458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 179 - 279
Target Start/End: Complemental strand, 43413964 - 43413862
Alignment:
Q  179 gtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc-agttattcatgtttaagatgaatttctctagccactaggctactt 276  Q
    |||| |||||||||||||| ||||||| ||| || ||||||| |||  |||||| | |||||||| |||||| |||||||||||||||||||||||||||    
T  43413964 gtaagggataatgcacaatttgtgcaggggctggggttcgaatcccaaacaccccacttattcatctttaaggtgaatttctctagccactaggctactt 43413865  T
Q  277 gac 279  Q
    |||    
T  43413864 gac 43413862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 268
Target Start/End: Complemental strand, 41845525 - 41845416
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc-agttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||| |  ||| ||||||| |||| |||||| | |||||||| |||||| |||||||||    
T  41845525 atgagcttagctcatttggtaagggataatgcacaatatgtgcagggatcggggttcgaaccccgaacaccctatttattcatctttaaggtgaatttct 41845426  T
Q  259 ctagccacta 268  Q
     |||||||||    
T  41845425 ttagccacta 41845416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 280
Target Start/End: Original strand, 8350445 - 8350557
Alignment:
Q  171 ctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggaca-cccagttattcat-gtttaagatgaatttctctagccact 267  Q
    |||| |||||||  |||||| |||||||| ||||| |||||||||||||||| |||||| |||| ||||||||  |||||||||||||| |||| |||||    
T  8350445 ctcatttggtaagtgataatacacaatatatgcaggggccggagttcgaacctcggacaccccacttattcatcttttaagatgaatttatctaaccact 8350544  T
Q  268 aggctacttgaca 280  Q
    || ||||||||||    
T  8350545 agactacttgaca 8350557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 280
Target Start/End: Complemental strand, 19733172 - 19733044
Alignment:
Q  154 agtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacacccag-ttattcatgtttaagatg 251  Q
    |||||| || || |||||||| ||||||| |||||||||| ||||| ||||| || ||| ||||||| |||| ||||| |  |||||||| |||||| ||    
T  19733172 agtccccataagcttagctcatttggtaagggataatgcataatatatgcaggggtcggggttcgaatcccgaacacctaaattattcatctttaaggtg 19733073  T
Q  252 aatttctctagccactaggctacttgaca 280  Q
    |||||||||| |||||| |||||||||||    
T  19733072 aatttctctaaccactaagctacttgaca 19733044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 31153506 - 31153605
Alignment:
Q  184 ggataatgcacaatatgtgcagaggccggagttcgaacc-cggacaccc--agttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||||||||||||||||||||| ||||||  |||||||| |||||||||  | |||||||| |||||| || ||||||||||| ||||| ||||||||||    
T  31153506 ggataatgcacaatatgtgcaggggccgggattcgaacctcggacacccccatttattcatctttaaggtggatttctctagctactagactacttgaca 31153605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 36104018 - 36103956
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc 223  Q
    ||||| ||| |||| |||||||||||||||||||||||||||||| |||||| ||||||||||    
T  36104018 atgagcttaactcatttggtaaaggataatgcacaatatgtgcaggggccggggttcgaaccc 36103956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 45536717 - 45536838
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttct 258  Q
    ||||| |||| ||| ||| ||| |||||||||| ||| ||||||| |||||||||||||| |||||||| |||| |||||||| || |   |||||||||    
T  45536717 atgaggttaggtcatttgataagggataatgcaaaatttgtgcaggggccggagttcgaaccccggacaccccacttattcatcttaatagtgaatttct 45536816  T
Q  259 ctagccactaggctacttgaca 280  Q
    ||||||||||| | ||||||||    
T  45536817 ctagccactagacaacttgaca 45536838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 280
Target Start/End: Complemental strand, 36587753 - 36587625
Alignment:
Q  154 agtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccgga-caccc-agttattcatgtttaagatg 251  Q
    |||||| ||||| ||| |||| |||||||  |||||  ||||||||||| || || ||| |||| ||||| || ||||| | ||||| || |||||||||    
T  36587753 agtccccatgagcttaactcatttggtaagagataaaacacaatatgtgtaggggtcggggttccaaccccgaacaccccacttatttatctttaagatg 36587654  T
Q  252 aatttctctagccactaggctacttgaca 280  Q
    |||||||| ||||||||||||||||||||    
T  36587653 aatttctcgagccactaggctacttgaca 36587625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 280
Target Start/End: Original strand, 10161957 - 10162089
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-------cggacacc-cagttattcatgttta 246  Q
    ||||| ||||| ||||||||  |||||| |||||||||||||||||||||| ||  || |||||||||       ||| |||| || |||||||| ||||    
T  10161957 gtccccatgagcttagctcatctggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccgggcacgggcacctcacttattcat-ttta 10162055  T
Q  247 agatgaatttctctagccactaggctacttgaca 280  Q
    || ||||||||||||||||||||| |||||||||    
T  10162056 aggtgaatttctctagccactaggttacttgaca 10162089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 279
Target Start/End: Complemental strand, 44828535 - 44828408
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacacc-cagttattcat-gtttaagatg 251  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||| ||||||| | | || ||||||| ||| |||||| || ||||||||  |||||| ||    
T  44828535 gtccccatgagcttagctcatttggtaagggataatgcacaatttgtgcagggtctggggttcgaaccccagacaccacacttattcatcttttaaggtg 44828436  T
Q  252 aatttctctagccactaggctacttgac 279  Q
    ||||||| |||||| ||| |||||||||    
T  44828435 aatttctttagccattagactacttgac 44828408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 276
Target Start/End: Complemental strand, 280084 - 279976
Alignment:
Q  169 agctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc-agttattcatgtttaagatgaatttctctagccac 266  Q
    |||||| ||||||| |||||||| ||||||||||||| ||  || ||||||| ||||||||||| | |||||||| |||||| ||||||||||||| | |    
T  280084 agctcatttggtaagggataatgtacaatatgtgcaggggtagg-gttcgaaccccggacacccaatttattcatttttaaggtgaatttctctagtcgc 279986  T
Q  267 taggctactt 276  Q
    ||| ||||||    
T  279985 tagactactt 279976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 276
Target Start/End: Original strand, 635768 - 635876
Alignment:
Q  169 agctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc-agttattcatgtttaagatgaatttctctagccac 266  Q
    |||||| ||||||| |||||||| ||||||||||||| ||  || ||||||| ||||||||||| | |||||||| |||||| ||||||||||||| | |    
T  635768 agctcatttggtaagggataatgtacaatatgtgcaggggtagg-gttcgaaccccggacacccaatttattcatttttaaggtgaatttctctagtcgc 635866  T
Q  267 taggctactt 276  Q
    ||| ||||||    
T  635867 tagactactt 635876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 276
Target Start/End: Original strand, 821571 - 821679
Alignment:
Q  169 agctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc-agttattcatgtttaagatgaatttctctagccac 266  Q
    |||||| ||||||| |||||||| ||||||||||||| ||  || ||||||| ||||||||||| | |||||||| |||||| ||||||||||||| | |    
T  821571 agctcatttggtaagggataatgtacaatatgtgcaggggtagg-gttcgaaccccggacacccaatttattcatttttaaggtgaatttctctagtcgc 821669  T
Q  267 taggctactt 276  Q
    ||| ||||||    
T  821670 tagactactt 821679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 279
Target Start/End: Complemental strand, 34038021 - 34037924
Alignment:
Q  184 ggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctctagccactaggctacttgac 279  Q
    ||||||| |||||||||||||| || ||||||||||| ||| |||| |||| |||||||| |||||  ||||||| |||| ||||||| |||||||||    
T  34038021 ggataatacacaatatgtgcagggggcggagttcgaatcccagacatcccacttattcatctttaaagtgaatttttctaaccactagactacttgac 34037924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 11052610 - 11052559
Alignment:
Q  229 cccagttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||| |||||||| |||||| ||||||||||||||||||||| |||||||||    
T  11052610 cccacttattcatctttaaggtgaatttctctagccactaggttacttgaca 11052559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 276
Target Start/End: Complemental strand, 19957411 - 19957300
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| ||||||| |||||||||| | ||| ||||| || ||  |||||||||| |||||||| | |||||||  |||||| ||||||||||||||     
T  19957411 ttagctcacttggtaagggataatgcatattatatgcaggggacgaggttcgaaccccggacaccccacttattcacctttaaggtgaatttctctagca 19957312  T
Q  265 actaggctactt 276  Q
     |||||||||||    
T  19957311 gctaggctactt 19957300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 30466672 - 30466739
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc 222  Q
    ||||| ||||| |||||||| ||||||| || ||||||||||||||||||| ||| || |||||||||    
T  30466672 gtccccatgagcttagctcatttggtaagggctaatgcacaatatgtgcaggggctggggttcgaacc 30466739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 12831555 - 12831628
Alignment:
Q  146 aaaataatagtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa 220  Q
    |||||||| ||||| ||||| ||| |||| ||||||||||| |||||||||||||||||| | | ||||||||||    
T  12831555 aaaataat-gtccccatgagtttaactcatttggtaaaggacaatgcacaatatgtgcagggtctggagttcgaa 12831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 266
Target Start/End: Complemental strand, 33820490 - 33820384
Alignment:
Q  162 tgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc-agttattcatgtttaagatgaatttctc 259  Q
    |||| |||||||| ||||||  ||||||| |||||| |||||||||| ||| ||||||| ||| ||||||| | |||||||| || ||| ||||||||||    
T  33820490 tgagcttagctcatttggtatgggataatacacaatttgtgcagaggtcggggttcgaatcccagacaccccaattattcatcttaaaggtgaatttctc 33820391  T
Q  260 tagccac 266  Q
    || ||||    
T  33820390 taaccac 33820384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 280
Target Start/End: Complemental strand, 38545010 - 38544900
Alignment:
Q  171 ctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacacccagttattcatgtttaagatgaatttctctagccactag 269  Q
    |||| ||||||| |||||||||||||||||||||  |  | | ||||||| |||| ||||||| ||||| || |||||| || ||||||||| ||||||     
T  38545010 ctcatttggtaagggataatgcacaatatgtgcatggatcagggttcgaatcccgaacacccacttatttatctttaaggtggatttctctaaccactaa 38544911  T
Q  270 gctacttgaca 280  Q
     ||||||||||    
T  38544910 actacttgaca 38544900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 268
Target Start/End: Complemental strand, 6938718 - 6938625
Alignment:
Q  176 ttggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccggacaccc-agttattcatgtttaagatgaatttctctagccacta 268  Q
    |||||||| |||||| ||||||||||| || || | ||| ||||||| |||||||| | ||||| || ||||| ||||||||||||| ||||||    
T  6938718 ttggtaaaagataatacacaatatgtggaggggtcagagatcgaacctggacaccctatttatttatttttaaaatgaatttctctaaccacta 6938625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 279
Target Start/End: Original strand, 23139067 - 23139195
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggaca-cccagttattcatgt--ttaagat 250  Q
    ||||| ||||| |||||||| |||  || |||||||||||||| ||||||| |||||  |||||||| || |||| |||| |||||||| |  ||||| |    
T  23139067 gtccccatgagcttagctcatttgacaagggataatgcacaatgtgtgcaggggccgaggttcgaacaccagacaccccacttattcattttattaaggt 23139166  T
Q  251 gaatttctctagccactaggctacttgac 279  Q
    |||||||||||| ||||  ||||||||||    
T  23139167 gaatttctctagtcactgagctacttgac 23139195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 43456742 - 43456630
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| ||||||| |||||||||||||||| || |  || ||| ||||||| |||||||| |||| |||||||| |||||| ||| |||||||  ||    
T  43456742 ttagctcatttggtaagggataatgcacaatatatgtaagggtcggggttcgaaccccggacaccccacttattcat-tttaaggtgattttctctgtcc 43456644  T
Q  265 actaggctacttga 278  Q
    ||||| ||||||||    
T  43456643 actagactacttga 43456630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 39172307 - 39172188
Alignment:
Q  162 tgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc-agttattcatgtttaagatgaatttctc 259  Q
    |||| ||| |||| ||||||||||||||||||   | | || |||||||| |||||||| ||||||||||| | |||||||  |||||  |||||||||     
T  39172307 tgagcttaactcatttggtaaaggataatgcatt-tgtatgtagaggccgaagttcgaatcccggacaccccatttattcacctttaaagtgaatttctt 39172209  T
Q  260 tagccactaggctacttgaca 280  Q
    ||||| |||||||||||||||    
T  39172208 tagcccctaggctacttgaca 39172188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 277
Target Start/End: Complemental strand, 27102350 - 27102310
Alignment:
Q  237 ttcatgtttaagatgaatttctctagccactaggctacttg 277  Q
    |||||||| ||| |||||||||||||||||||| |||||||    
T  27102350 ttcatgttaaaggtgaatttctctagccactagactacttg 27102310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 8e-33; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 154 - 279
Target Start/End: Complemental strand, 48433813 - 48433686
Alignment:
Q  154 agtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatg 251  Q
    |||||| ||||| |||||||| ||||||| |||||||||||||||||||||| |||||| |||| || |||||||| |||| |||||||| |||||| ||    
T  48433813 agtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcaaaccccggacaccccacttattcatctttaaggtg 48433714  T
Q  252 aatttctctagccactaggctacttgac 279  Q
    ||||||||||||||||||||||||||||    
T  48433713 aatttctctagccactaggctacttgac 48433686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 278
Target Start/End: Complemental strand, 23824693 - 23824569
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccggacaccc-agttattcatgtttaagatgaa 253  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||||||||||  |||||  |||||||||||||||||| | |||||||| |||||| ||||    
T  23824693 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcatgggccgaggttcgaacccggacaccctacttattcatctttaaggtgaa 23824594  T
Q  254 tttctctagccactaggctacttga 278  Q
    ||||||||||||||||| |||||||    
T  23824593 tttctctagccactaggttacttga 23824569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 3961494 - 3961384
Alignment:
Q  171 ctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctctagccacta 268  Q
    |||| |||||||||||||||||||||| |||||||||||||| ||||||| |||||||| |||| |||||||| || ||| |||||||||||||| ||||    
T  3961494 ctcatttggtaaaggataatgcacaatttgtgcagaggccggggttcgaaccccggacatcccacttattcattttaaaggtgaatttctctagctacta 3961395  T
Q  269 ggctacttgac 279  Q
    |||||||||||    
T  3961394 ggctacttgac 3961384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 4956173 - 4956068
Alignment:
Q  176 ttggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttctctagccactaggcta 273  Q
    ||||||| |||||||||||||||||||||| || ||| |||||||||| |||||||| | |||||||| |||||| ||||||||||||||||||||||||    
T  4956173 ttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccctggacaccccacttattcatctttaaggtgaatttctctagccactaggcta 4956074  T
Q  274 cttgac 279  Q
    ||||||    
T  4956073 cttgac 4956068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 264
Target Start/End: Original strand, 40273814 - 40273925
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||||||||||| |||||| ||||||| |||||||| |||| |||||||| |||||| |||    
T  40273814 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtga 40273913  T
Q  253 atttctctagcc 264  Q
    ||||||||||||    
T  40273914 atttctctagcc 40273925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 161 - 279
Target Start/End: Original strand, 31793467 - 31793587
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||| ||| |||||||||||||||||||||| || ||| ||||||| |||||||| |||| |||||||| |||||| || ||||||    
T  31793467 atgagcttagctcatttgttaagggataatgcacaatatgtgcaggggtcggggttcgaaccccggacaccccacttattcatctttaaggtggatttct 31793566  T
Q  259 ctagccactaggctacttgac 279  Q
    |||||||||||| ||||||||    
T  31793567 ctagccactaggttacttgac 31793587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 280
Target Start/End: Original strand, 38378212 - 38378339
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatga 252  Q
    ||||| ||||| |||| | | ||||||| |||||||||||||||||||||| |||||| ||| ||| |||||||| |||| |||||||| |||||| |||    
T  38378212 gtccccatgagtttagtttatttggtaagggataatgcacaatatgtgcaggggccggggtttgaaccccggacaccccacttattcatttttaaggtga 38378311  T
Q  253 atttctctagccactaggctacttgaca 280  Q
    ||||||||| |||||| |||||||||||    
T  38378312 atttctctacccactaagctacttgaca 38378339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 279
Target Start/End: Original strand, 24029978 - 24030103
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||| ||| ||||||||||||||||||| || |||||| ||||||| ||| |||| |||| |||||||| |||||| |||    
T  24029978 gtccccatgagtttagctcatttgataagggataatgcacaatatgtgtaggggccggggttcgaaccccagacaccccatttattcatctttaaggtga 24030077  T
Q  253 atttctctagccactaggctacttgac 279  Q
    |||||||||||| |||| |||||||||    
T  24030078 atttctctagcc-ctagactacttgac 24030103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 279
Target Start/End: Complemental strand, 33248904 - 33248778
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc-agttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||||||| |||| ||||||||||| |||||||| ||| ||||||| ||||||||||| | |||||||| |||||| |||    
T  33248904 gtccccatgagcttagctcatttggtaagggatgatgcacaatatatgcagaggtcggggttcgaaccccggacaccctacttattcatctttaaggtga 33248805  T
Q  253 atttctctagccactaggctacttgac 279  Q
    |||||| | | |||||| |||||||||    
T  33248804 atttctttcgtcactagactacttgac 33248778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 279
Target Start/End: Original strand, 27454010 - 27454131
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggaca-cccagttattcatgtt-taagatgaatttc 257  Q
    ||||| |||||||| ||||||| |||||||||||||| ||||||| || ||  ||||||||| |||||| |||| |||||||| ||  ||| ||||||||    
T  27454010 atgagcttagctcatttggtaagggataatgcacaatttgtgcaggggtcgaggttcgaacctcggacaccccacttattcatcttaaaaggtgaatttc 27454109  T
Q  258 tctagccactaggctacttgac 279  Q
    ||||||||||||||||||||||    
T  27454110 tctagccactaggctacttgac 27454131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 43440703 - 43440798
Alignment:
Q  176 ttggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctctagccactag 269  Q
    ||||||| ||||||||||||||||||||||||| ||| |||||||  || |||| |||| |||||||| |||||| ||||||||||||||||||||    
T  43440703 ttggtaagggataatgcacaatatgtgcagaggtcggggttcgaattccagacaccccacttattcatctttaaggtgaatttctctagccactag 43440798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 12166087 - 12166201
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| ||||||| |||||||||||||| ||||||| ||| || ||||||| ||| |||| |||| |||||||| |||||| ||||||||||||||     
T  12166087 ttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaatttctctagct 12166186  T
Q  265 actaggctacttgac 279  Q
    ||||  |||||||||    
T  12166187 actaaactacttgac 12166201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 279
Target Start/End: Complemental strand, 28914972 - 28914853
Alignment:
Q  163 gagattagctcaattggtaaaggataatgcacaatatgtgcagagg-ccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttctc 259  Q
    ||||||||||||  |||||| |||||||||| | ||| ||||| || |||| |||||||||| |||||||| | |||||||  || ||| ||||||||||    
T  28914972 gagattagctcacatggtaagggataatgcatattatatgcagggggccggggttcgaaccccggacaccccacttattcactttaaaggtgaatttctc 28914873  T
Q  260 tagccactaggctacttgac 279  Q
    ||||||||||||||||||||    
T  28914872 tagccactaggctacttgac 28914853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 276
Target Start/End: Complemental strand, 36528321 - 36528198
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatga 252  Q
    ||||| ||||| ||| |||| ||||||| ||||||||||||||||||  || || ||||||||||| |||||||| ||||  ||||||| |||||| |||    
T  36528321 gtccccatgagcttaactcatttggtaagggataatgcacaatatgtataggggtcggagttcgaaccccggacatcccacctattcatttttaaggtga 36528222  T
Q  253 atttctctagccactaggctactt 276  Q
    |||| | |||||||||| ||||||    
T  36528221 atttatttagccactagactactt 36528198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 42554633 - 42554743
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc-agttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||| ||  || ||||||| |||||| |||| | |||||||| |||| | ||||||||     
T  42554633 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccggatacccgacttattcatctttatggtgaatttcc 42554732  T
Q  259 ctagccactag 269  Q
    |||||||||||    
T  42554733 ctagccactag 42554743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 48619796 - 48619913
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggacac-ccagttattcatgtttaagatgaatttct 258  Q
    ||||| ||| |||| |||||||||||||||| ||||||||||||| ||  || ||||||||  | ||||| ||| |||||||| |||||| |||||||||    
T  48619796 atgagtttaactcatttggtaaaggataatgtacaatatgtgcaggggttgg-gttcgaacttcagacactccacttattcatctttaaggtgaatttct 48619894  T
Q  259 ctagccactaggctacttg 277  Q
    |||||||||| ||||||||    
T  48619895 ctagccactaagctacttg 48619913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 278
Target Start/End: Complemental strand, 26456107 - 26455982
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacac-ccagttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||||||| ||| |||||||||||||||||| | | |  ||| ||| ||| ||||| |||||||||||  || ||| |||    
T  26456107 gtccccatgagcttagctcatttggtaagggacaatgcacaatatgtgcagggactgacgtttgaaccccagacactccagttattcaccttaaaggtga 26456008  T
Q  253 atttctctagccactaggctacttga 278  Q
    ||||||||||||||||| ||||||||    
T  26456007 atttctctagccactagactacttga 26455982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 279
Target Start/End: Original strand, 23602274 - 23602393
Alignment:
Q  162 tgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacacc-cagttattcatgtttaagatgaatttctc 259  Q
    |||| |||||||| ||| ||| | |||||||| | ||| ||||| | |||||||||||| |||||||||| || |||||||  |||||| |||||||||     
T  23602274 tgagcttagctcatttgataaggaataatgcatattatatgcagtgaccggagttcgaaccccggacacctcacttattcacctttaaggtgaatttctt 23602373  T
Q  260 tagccactaggctacttgac 279  Q
    |||||||||| |||||||||    
T  23602374 tagccactagactacttgac 23602393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 279
Target Start/End: Original strand, 5228064 - 5228189
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||| ||||||||||||||   | | ||||| |||||| ||||||| || |||||||| | |||||||  |||||| |||    
T  5228064 gtccccatgagcttagctcacttgataaaggataatgcatttt-tatgcaggggccggggttcgaatcctggacaccccacttattcacctttaaggtga 5228162  T
Q  253 atttctctagccactaggctacttgac 279  Q
    |||||||||||| ||||||||||||||    
T  5228163 atttctctagccgctaggctacttgac 5228189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 42338348 - 42338272
Alignment:
Q  156 tccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc 231  Q
    |||| ||||| |||||||| ||||||| | |||||||||||||||||||| || ||| ||||||| |||||||||||    
T  42338348 tccccatgagcttagctcatttggtaaggaataatgcacaatatgtgcaggggacggggttcgaatcccggacaccc 42338272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 8249698 - 8249764
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac 221  Q
    ||||| ||||| |||||||| |||||||||||||||||| ||||| ||||| || ||| ||||||||    
T  8249698 gtccccatgagcttagctcacttggtaaaggataatgcataatatatgcaggggtcggggttcgaac 8249764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 37563292 - 37563226
Alignment:
Q  215 ttcgaacccggacaccc-agttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||||| |||||||||| | |||||||| ||||||||||||||||||| || |||| ||||||||||    
T  37563292 ttcgaaaccggacaccctacttattcatttttaagatgaatttctctaaccgctagactacttgaca 37563226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 3902363 - 3902308
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc 223  Q
    |||||||| ||||||| |||||||||| ||||||||||| |||||| ||||||||||    
T  3902363 ttagctcatttggtaagggataatgcaaaatatgtgcag-ggccggggttcgaaccc 3902308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 280
Target Start/End: Original strand, 20013591 - 20013701
Alignment:
Q  171 ctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctctagccacta 268  Q
    |||| ||||||||||||||||||   | | ||||| ||||| |||||||| |||||||| |||| |||| ||  |||||||||||||||||||||| |||    
T  20013591 ctcatttggtaaaggataatgcatt-tgtatgcaggggccgaagttcgaatcccggacatcccacttatccacctttaagatgaatttctctagccgcta 20013689  T
Q  269 ggctacttgaca 280  Q
    || || ||||||    
T  20013690 ggttatttgaca 20013701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 22156166 - 22156217
Alignment:
Q  229 cccagttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||| |||||||| | ||||||||||||||||| ||||||| ||||||||||    
T  22156166 cccacttattcatctataagatgaatttctctaaccactagactacttgaca 22156217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 22212081 - 22212132
Alignment:
Q  229 cccagttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||| |||||||| | ||||||||||||||||| ||||||| ||||||||||    
T  22212081 cccacttattcatctataagatgaatttctctaaccactagactacttgaca 22212132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 280
Target Start/End: Complemental strand, 26606211 - 26606084
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacac-ccagttattcatgtttaagatga 252  Q
    ||||||||||| |||| ||| ||| ||| | |||||||| |  || || || |||||| ||| |||||| |||||| ||| |||||||  |||||| |||    
T  26606211 gtccctatgagcttagttcacttgataaggaataatgcaaatcatatgtaggggccggggtttgaaccctggacactccacttattcacctttaaggtga 26606112  T
Q  253 atttctctagccactaggctacttgaca 280  Q
    |||||||||||| || ||||||||||||    
T  26606111 atttctctagccgcttggctacttgaca 26606084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 280
Target Start/End: Original strand, 37918671 - 37918800
Alignment:
Q  153 tagtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa--cccggacacc-cagttattcatgtttaaga 249  Q
    ||||||||||||  ||| |||| ||| ||| ||||||||||||| ||||| ||  | ||| |||||||  |||||||||| || |||||||| ||| ||     
T  37918671 tagtccctatgaacttaactcatttgataagggataatgcacaa-atgtgtaggcgtcggggttcgaatccccggacacctcacttattcatcttttagg 37918769  T
Q  250 tgaatttctctagccactaggctacttgaca 280  Q
    |||||||||||| ||||||  ||||||||||    
T  37918770 tgaatttctctaaccactaaactacttgaca 37918800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 8133897 - 8133831
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac 221  Q
    ||||||||||| |||||||| ||| ||| |||||||||| ||| | ||||| ||||| |||||||||    
T  8133897 gtccctatgagcttagctcacttgataatggataatgcataatttatgcaggggccgaagttcgaac 8133831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 15025148 - 15025274
Alignment:
Q  154 agtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccgga-caccc-agttattcatgtttaagatg 251  Q
    |||||| ||||| ||| |||| ||||||| |||||||||| | | | | ||| |||||| |||| ||||| || ||||| | |||||||  |||||| ||    
T  15025148 agtccccatgagcttaactcatttggtaagggataatgcatattttatacaggggccggggttcaaaccccgaacaccccacttattcacctttaaggtg 15025247  T
Q  252 aatttctctagccactaggctacttga 278  Q
    |||||||||| || |||||||||||||    
T  15025248 aatttctctacccgctaggctacttga 15025274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 44986593 - 44986655
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc 223  Q
    ||||| |||||||| ||||||| ||||||||||||||  |||||| ||||||  |||||||||    
T  44986593 atgagcttagctcatttggtaagggataatgcacaattagtgcagtggccgggattcgaaccc 44986655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 279
Target Start/End: Complemental strand, 3889897 - 3889776
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagagg-ccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttc 257  Q
    ||||| |||||||| |||  || |||||||| ||||||| ||||| || || | |||||||||| |||||||| | |||||||| || ||| ||||||||    
T  3889897 atgagcttagctcatttgacaagggataatgtacaatatatgcagggggccagggttcgaaccccggacaccccacttattcatcttaaaggtgaatttc 3889798  T
Q  258 tctagccactaggctacttgac 279  Q
    |||| ||| |||| ||||||||    
T  3889797 tctaaccattaggttacttgac 3889776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 280
Target Start/End: Complemental strand, 10091513 - 10091432
Alignment:
Q  201 tgcagaggccggagttcgaacccg-gacacccag-ttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    ||||| |||||| ||||||||||  ||||||||  |||||||  |||||| ||||||||||||||||||| |||| ||||||    
T  10091513 tgcaggggccggggttcgaaccctagacacccaacttattcacctttaaggtgaatttctctagccactacgctatttgaca 10091432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 24315448 - 24315387
Alignment:
Q  162 tgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc 223  Q
    |||| |||||||| || |||| ||||||||||||||||||| || || ||| ||||||||||    
T  24315448 tgagcttagctcatttagtaatggataatgcacaatatgtgtaggggtcggggttcgaaccc 24315387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 276
Target Start/End: Original strand, 37665744 - 37665860
Alignment:
Q  162 tgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctc 259  Q
    |||| ||| |||| ||||||||||||||  || | ||| ||||| |||||| |||| || |||||||| |||| ||||||   |||||| |||||||||     
T  37665744 tgagcttaactcatttggtaaaggataaaacatattatatgcaggggccggggttcaaaccccggacaccccacttattcgcctttaaggtgaatttctt 37665843  T
Q  260 tagccactaggctactt 276  Q
    |||||||||| ||||||    
T  37665844 tagccactagactactt 37665860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 156 - 279
Target Start/End: Original strand, 31250141 - 31250266
Alignment:
Q  156 tccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaa 253  Q
    |||| ||||| |||||||| ||||||| |||||||||||||||||||||| |||||| ||||||| |||||||| |||| |||||||| |||||| ||||    
T  31250141 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaa 31250240  T
Q  254 tttctctagccactaggctacttgac 279  Q
    ||||||||||||||||||| ||||||    
T  31250241 tttctctagccactaggctgcttgac 31250266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 156 - 280
Target Start/End: Original strand, 43227860 - 43227987
Alignment:
Q  156 tccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaa 253  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||||||| |||||| ||||||| |||||||| |||| |||||||| |||||| ||||    
T  43227860 tccctatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaa 43227959  T
Q  254 tttctctagccact-aggctacttgaca 280  Q
    |||||||||||||| ||||| |||||||    
T  43227960 tttctctagccactaaggctgcttgaca 43227987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 155 - 279
Target Start/End: Complemental strand, 38503359 - 38503233
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||||||||||| |||||| ||||||| |||||||| |||| |||||||| |||||| |||    
T  38503359 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtga 38503260  T
Q  253 atttctctagccactaggctacttgac 279  Q
    ||||||||||||| ||| |||||||||    
T  38503259 atttctctagccaatagactacttgac 38503233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 33545476 - 33545363
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggacacccagttattcatgtttaagatgaatttctctagcca 265  Q
    |||||||| ||| ||  |||||||||||||||||||||| || ||||||| ||||| |||||||||  |||||||| |||||| ||||||||||||||||    
T  33545476 ttagctcatttgctatgggataatgcacaatatgtgcaggggtcggagtttgaacctcggacacccccttattcatctttaaggtgaatttctctagcca 33545377  T
Q  266 ctaggctacttgac 279  Q
    ||||||||||||||    
T  33545376 ctaggctacttgac 33545363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 280
Target Start/End: Original strand, 5263174 - 5263289
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccg-gacacc-cagttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| ||||||| ||||||||||||||||||| || ||  |  ||||||||||| |||||| || |||||||| |||||| |||||||||||||||    
T  5263174 ttagctcatttggtaatggataatgcacaatatgtgtagggggtgatgttcgaacccgagacaccacatttattcatctttaagctgaatttctctagcc 5263273  T
Q  265 actaggctacttgaca 280  Q
    ||||||||||||||||    
T  5263274 actaggctacttgaca 5263289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 280
Target Start/End: Complemental strand, 12375514 - 12375382
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-------cggacacc-cagttattcatgttta 246  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||||||||||| |||||| |||||||||       |||||||| || |||||||| ||||    
T  12375514 gtccccatgagcttagctcatttggtaatggataatgcacaatatgtgcaggggccggggttcgaaccccgggcacggacacctcacttattcat-ttta 12375416  T
Q  247 agatgaatttctctagccactaggctacttgaca 280  Q
    || |||||||||||||||||||||||| ||||||    
T  12375415 aggtgaatttctctagccactaggctatttgaca 12375382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 17077360 - 17077481
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||||||| |||||||||||||| ||||||| || |||  ||||||||| |||||||| | |||||||| || ||| ||||||| |    
T  17077360 atgagcttagctcatttggtaagggataatgcacaatttgtgcaggggtcgggattcgaaccccggacaccccacttattcatcttaaaggtgaatttat 17077459  T
Q  259 ctagccactaggctacttgaca 280  Q
    ||||||||||||||||||||||    
T  17077460 ctagccactaggctacttgaca 17077481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 42208916 - 42209036
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggacacc-cagttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| || |||| ||||||| |||||||||||||| |||||  |||||||| ||||||||| || |||||||| |||||| |||||||||    
T  42208916 atgagcttagctcatttagtaagggataatacacaatatgtgcag-ggccgaggttcgaactccggacacctcacttattcatctttaaggtgaatttct 42209014  T
Q  259 ctagccactaggctacttgaca 280  Q
    |||| |||||||||||||||||    
T  42209015 ctagtcactaggctacttgaca 42209036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 280
Target Start/End: Complemental strand, 4395953 - 4395826
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatga 252  Q
    ||||| ||||| ||| |||| |||| ||| ||||||||| ||| ||||||| |||||||||||||| ||| |||| |||| |||||||| |||||| |||    
T  4395953 gtccccatgagcttaactcatttggcaaatgataatgcataatgtgtgcaggggccggagttcgaacccctgacaccccatttattcatctttaaggtga 4395854  T
Q  253 atttctctagccactaggctacttgaca 280  Q
    ||||||||||||| ||||||| ||||||    
T  4395853 atttctctagccaataggctatttgaca 4395826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 280
Target Start/End: Original strand, 5039674 - 5039800
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggacaccc-agttattcatgtttaagatga 252  Q
    ||||| ||||| ||| |||| ||||||| |||||||| ||||||||||||  |||||| ||||||||  ||||||||| | |||||||| |||||| | |    
T  5039674 gtccccatgagcttaactcatttggtaa-ggataatgtacaatatgtgcaagggccggggttcgaacttcggacaccccacttattcatctttaaggtaa 5039772  T
Q  253 atttctctagccactaggctacttgaca 280  Q
    ||||||||||||||||| ||||||||||    
T  5039773 atttctctagccactagactacttgaca 5039800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 278
Target Start/End: Complemental strand, 15106968 - 15106864
Alignment:
Q  176 ttggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctctagccactaggcta 273  Q
    ||||||| |||||||||||||| |||||||||| ||| ||||||| |||||||| |||| |||||||| ||||| || |||||||||| ||||||  |||    
T  15106968 ttggtaagggataatgcacaatttgtgcagaggtcggggttcgaaccccggacaccccacttattcatctttaaaataaatttctctaaccactaaacta 15106869  T
Q  274 cttga 278  Q
    |||||    
T  15106868 cttga 15106864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 280
Target Start/End: Complemental strand, 15470723 - 15470596
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggag-ttcgaacccg-gacaccc-agttattcatgtttaagatg 251  Q
    ||||||||||| |||  ||| ||||||| ||||||||||||||||||||| ||| | ||| |||||||||  ||||||| | |||||||| |||||| ||    
T  15470723 gtccctatgagcttaattcatttggtaagggataatgcacaatatgtgca-agggctgagattcgaaccccagacaccccatttattcatctttaaggtg 15470625  T
Q  252 aatttctctagccactaggctacttgaca 280  Q
    |||||||||||||||||  ||||||||||    
T  15470624 aatttctctagccactaaactacttgaca 15470596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 15696206 - 15696331
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccgg------acacc-cagttattcatgtttaagatgaa 253  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||| || ||||||  ||||| |||||      ||||| || |||||||| |||||| ||||    
T  15696206 atgagtttagctcatttgataagggataatgcacaatatgtgtaggggccgggattcgaccccgggcacggacacctcacttattcat-tttaaggtgaa 15696304  T
Q  254 tttctctagccactaggctacttgaca 280  Q
    |||||||||||||||||||| ||||||    
T  15696305 tttctctagccactaggctatttgaca 15696331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 278
Target Start/End: Original strand, 1572114 - 1572228
Alignment:
Q  166 attagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttctctagc 263  Q
    ||||||||| ||| ||| |||| ||||||| | ||||||| ||| || |||||||||| |||| ||| | |||||||| || ||| ||||||||||||||    
T  1572114 attagctcatttgttaagggattatgcacattttgtgcaggggctggggttcgaaccccggactccccacttattcatcttaaaggtgaatttctctagc 1572213  T
Q  264 cactaggctacttga 278  Q
    |||||| ||||||||    
T  1572214 cactagactacttga 1572228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 261
Target Start/End: Original strand, 34729481 - 34729572
Alignment:
Q  171 ctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccggaca-cccagttattcatgtttaagatgaatttctcta 261  Q
    |||| ||||||| |||||||||| | ||| ||||| || ||| ||||||||||||||| |||| |||||||  |||||| ||||||||||||    
T  34729481 ctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaacccggacaccccacttattcacctttaaggtgaatttctcta 34729572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 279
Target Start/End: Complemental strand, 931040 - 930914
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggaca-cccagttattcatgtttaagatga 252  Q
    ||||| |||||  ||||||| | ||||| ||| |||||||||||||||||| ||  || ||||||||| | |||| |||| |||||||| || ||| |||    
T  931040 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcaggggttggggttcgaacctcagacatcccacttattcatcttaaaggtga 930941  T
Q  253 atttctctagccactaggctacttgac 279  Q
    |||||||||| |||||  |||||||||    
T  930940 atttctctagtcactaaactacttgac 930914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 42643891 - 42643838
Alignment:
Q  169 agctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc 222  Q
    |||||| ||||||| |||||||||||||||||||||| || || ||||||||||    
T  42643891 agctcatttggtaagggataatgcacaatatgtgcaggggtcgaagttcgaacc 42643838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 8981259 - 8981307
Alignment:
Q  101 agtaatgcaggaaagaaagaaagaaatataacctatctaaaaaagaaaa 149  Q
    |||| |||||||||||||| |||| |||||||||||| |||||||||||    
T  8981259 agtagtgcaggaaagaaagcaagatatataacctatccaaaaaagaaaa 8981307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 280
Target Start/End: Complemental strand, 15680991 - 15680876
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggacaccc-agttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| ||||||| | |||||||| ||||| ||| | || |  | |||||||| ||||||||| | |||||||  |||||| |||||||||||| ||    
T  15680991 ttagctcacttggtaaggaataatgcataatatatgcggtggtcaaaattcgaacctcggacaccccacttattcacctttaaggtgaatttctctaacc 15680892  T
Q  265 actaggctacttgaca 280  Q
     |||||||||||||||    
T  15680891 gctaggctacttgaca 15680876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 8981122 - 8981160
Alignment:
Q  8 tcacatgcttgcgatgtagtgagctaatgatggtggttt 46  Q
    |||||||||||| || |||||||||||||||||||||||    
T  8981122 tcacatgcttgcaatatagtgagctaatgatggtggttt 8981160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 29530793 - 29530835
Alignment:
Q  181 aaaggataatgcacaatatgtgcagaggccggagttcgaaccc 223  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||    
T  29530793 aaaggataatgcacaatttgtgcaggggccggggttcgaaccc 29530835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 461997 - 462046
Alignment:
Q  153 tagtccctatgagattagctcaattggtaaaggataatgcacaatatgtg 202  Q
    ||||||||||||  |||||||| ||||||| || ||||||||||||||||    
T  461997 tagtccctatgaacttagctcatttggtaaggggtaatgcacaatatgtg 462046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 26671600 - 26671701
Alignment:
Q  179 gtaaaggataatgcacaatatgtgcagaggccggagttcgaacccggacaccc-agttattcatgtttaa-gatgaatttctctagccactaggctactt 276  Q
    |||| |||||||||||||| ||||||| ||| |   |||||| || ||||||| | |||||||| || || | |||||||||||||||||||| ||||||    
T  26671600 gtaagggataatgcacaatttgtgcaggggctgagtttcgaatccagacaccccacttattcatcttaaaaggtgaatttctctagccactagactactt 26671699  T
Q  277 ga 278  Q
    ||    
T  26671700 ga 26671701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 26943197 - 26943298
Alignment:
Q  179 gtaaaggataatgcacaatatgtgcagaggccggagttcgaacccggacaccc-agttattcatgtttaa-gatgaatttctctagccactaggctactt 276  Q
    |||| |||||||||||||| ||||||| ||| |   |||||| || ||||||| | |||||||| || || | |||||||||||||||||||| ||||||    
T  26943197 gtaagggataatgcacaatttgtgcaggggctgagtttcgaatccagacaccccacttattcatcttaaaaggtgaatttctctagccactagactactt 26943296  T
Q  277 ga 278  Q
    ||    
T  26943297 ga 26943298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 280
Target Start/End: Complemental strand, 36037605 - 36037568
Alignment:
Q  243 tttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  36037605 tttaaggtgaatttctctagccactaggctatttgaca 36037568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 42902109 - 42902040
Alignment:
Q  212 gagttcgaacccg-gacacccagttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    ||||||||||||  |||| ||| |||||||| |||||| | |||||||||||||||||  ||||||||||    
T  42902109 gagttcgaacccctgacaaccacttattcatctttaaggtaaatttctctagccactaaactacttgaca 42902040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 257
Target Start/End: Original strand, 87800 - 87888
Alignment:
Q  171 ctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggaca-cccagttattcatgtttaagatgaatttc 257  Q
    |||| ||||||| |||||||||||||||| ||||  || |||||||||||| || |||| ||||  ||||||| |||||| ||||||||    
T  87800 ctcatttggtaagggataatgcacaatatatgcaagggtcggagttcgaactccagacaccccaactattcatttttaaggtgaatttc 87888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 16556450 - 16556571
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccgga-caccc-agttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||| || ||| |||||||||| || ||||| | |||||||| |||||| |||||||||    
T  16556450 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccccgaacaccccacttattcatctttaaggtgaatttct 16556549  T
Q  259 ctagccactaggctacttgaca 280  Q
    ||||||||||||||||||||||    
T  16556550 ctagccactaggctacttgaca 16556571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 154 - 279
Target Start/End: Original strand, 46283114 - 46283241
Alignment:
Q  154 agtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatg 251  Q
    |||||| ||||| ||| |||| ||||||| |||||||||||||||||||||| |||||| ||||||| |||||||| |||| |||||||| |||||| ||    
T  46283114 agtccccatgagcttacctcatttggtaagggataatgcacaatatgtgcagcggccggggttcgaaccccggacaccccacttattcatctttaaggtg 46283213  T
Q  252 aatttctctagccactaggctacttgac 279  Q
    ||||||||||| |||||| |||||||||    
T  46283214 aatttctctagtcactagactacttgac 46283241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 154 - 279
Target Start/End: Original strand, 50815699 - 50815826
Alignment:
Q  154 agtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatg 251  Q
    |||||| ||||| |||||||| ||| |||||||||||||||||| ||||||| |||||| ||||||| |||||||| ||||  ||||||| || ||| ||    
T  50815699 agtccccatgagcttagctcatttgataaaggataatgcacaatttgtgcaggggccggggttcgaaccccggacaccccacatattcatcttaaaggtg 50815798  T
Q  252 aatttctctagccactaggctacttgac 279  Q
    ||||||||||||||||||||||||||||    
T  50815799 aatttctctagccactaggctacttgac 50815826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 279
Target Start/End: Complemental strand, 40407062 - 40406936
Alignment:
Q  156 tccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggcc-ggagttcgaa-cccggaca-cccagttattcatgtttaagatga 252  Q
    |||| ||||| |||||||| ||||||| |||||||||||||||||||||| |||| || ||||||| |||||||| |||| |||||||| |||||| |||    
T  40407062 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccgggggttcgaaccccggacaccccacttattcatctttaaggtga 40406963  T
Q  253 atttctctagccactaggctacttgac 279  Q
    |||||||||||||||||||| ||||||    
T  40406962 atttctctagccactaggctgcttgac 40406936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 45355795 - 45355693
Alignment:
Q  179 gtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacacccagttattcatgtttaagatgaatttctctagccactaggctacttg 277  Q
    |||| ||||||||||||||||||| || || ||| |||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  45355795 gtaagggataatgcacaatatgtgtaggggtcggggttcgaaccccggacacccacttattcatctttaaggtgaatttctctagccactaggctacttg 45355696  T
Q  278 aca 280  Q
    |||    
T  45355695 aca 45355693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 45369536 - 45369434
Alignment:
Q  179 gtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacacccagttattcatgtttaagatgaatttctctagccactaggctacttg 277  Q
    |||| ||||||||||||||||||| || || ||| |||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  45369536 gtaagggataatgcacaatatgtgtaggggtcggggttcgaaccccggacacccacttattcatctttaaggtgaatttctctagccactaggctacttg 45369437  T
Q  278 aca 280  Q
    |||    
T  45369436 aca 45369434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 11491309 - 11491195
Alignment:
Q  167 ttagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttctctagcc 264  Q
    |||||||| |||  || |||||||||| ||| ||||||| ||||||||||||||||| |||||||| | |||||||| |||||| |||||||||||||||    
T  11491309 ttagctcatttgacaagggataatgcataatttgtgcaggggccggagttcgaaccccggacaccccacttattcatctttaaggtgaatttctctagcc 11491210  T
Q  265 actaggctacttgac 279  Q
    |||||||||||||||    
T  11491209 actaggctacttgac 11491195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 279
Target Start/End: Original strand, 51974740 - 51974866
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-cggaca-cccagttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||||||||||| || |||  |||||||| |||||| |||| ||||| || |||||| |||    
T  51974740 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcgggattcgaacctcggacatcccacttatttatctttaaggtga 51974839  T
Q  253 atttctctagccactaggctacttgac 279  Q
    |||| ||||||||||||||||||||||    
T  51974840 atttatctagccactaggctacttgac 51974866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 36993040 - 36993161
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||| || ||  || ||| |||||| |||||||| | |||||||| |||||| |||||||||    
T  36993040 atgagcttagctcatttgataagggataatgcacaatatgtgaaggggttggggtttgaaccccggacaccccaattattcatctttaaggtgaatttct 36993139  T
Q  259 ctagccactaggctacttgaca 280  Q
    |||||||||||||||| |||||    
T  36993140 ctagccactaggctacctgaca 36993161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 13210266 - 13210146
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-------cggacacc-cagttattcatgttta 246  Q
    ||||||||||| |||||||| ||||| | |||||||||||||||||||||| |||||| |||||||||       |||||||| || |||||||| ||||    
T  13210266 gtccctatgagcttagctcatttggtcagggataatgcacaatatgtgcaggggccggggttcgaaccccgggtacggacacctcacttattcat-ttta 13210168  T
Q  247 agatgaatttctctagccacta 268  Q
    || |||||||||||||||||||    
T  13210167 aggtgaatttctctagccacta 13210146  T

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Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 42154580 - 42154686
Alignment:
Q  176 ttggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacac-ccagttattcatgtttaagatgaatttctctagccactaggcta 273  Q
    ||||||| ||||||| ||||||||||||||||| ||| ||||||| |||||||||  || ||| |||| |||||| ||||||||||||||| || |||||    
T  42154580 ttggtaagggataattcacaatatgtgcagaggtcggggttcgaaccccggacacttcacttaatcatctttaaggtgaatttctctagccgctgggcta 42154679  T
Q  274 cttgaca 280  Q
    |||||||    
T  42154680 cttgaca 42154686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 26885496 - 26885375
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacac-ccagttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| |||| |  |||||||||||| ||| ||| | |||||| |||||||||| |||||| ||| ||||| || |||||| || ||||||    
T  26885496 atgagcttagctcatttggcaggggataatgcacattatatgctggggccggggttcgaaccccggacactccacttatttatctttaaggtggatttct 26885397  T
Q  259 ctagccactaggctacttgaca 280  Q
    ||||||||||||||||||||||    
T  26885396 ctagccactaggctacttgaca 26885375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 260
Target Start/End: Complemental strand, 22096472 - 22096386
Alignment:
Q  176 ttggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggaca-cccagttattcatgtttaagatgaatttctct 260  Q
    ||||||| |||||||||||||||||||||| |||||  |||||||| ||||||| |||| |||||||| |||||| |||||||||||    
T  22096472 ttggtaagggataatgcacaatatgtgcaggggccgaggttcgaactccggacaccccacttattcatttttaaggtgaatttctct 22096386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 276
Target Start/End: Original strand, 38690660 - 38690782
Alignment:
Q  156 tccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatgaa 253  Q
    |||| ||||| |||||||| ||||||| |||||||||| | ||| ||||| || ||| |||||||||| |||||||| | ||||||   |||||| ||||    
T  38690660 tccccatgagcttagctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattctcctttaaggtgaa 38690759  T
Q  254 tttctctagccactaggctactt 276  Q
    ||||||||||| |||||||||||    
T  38690760 tttctctagccgctaggctactt 38690782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 278
Target Start/End: Complemental strand, 2832173 - 2832048
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacccgga-caccc-agttattcatgtttaagatga 252  Q
    ||||| ||||| ||||||||  |||||| || | ||||||||||||||||| || ||| ||||||||||  | ||||| | |||||||| |||||| |||    
T  2832173 gtccccatgagcttagctcatctggtaaggggtgatgcacaatatgtgcaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggtga 2832074  T
Q  253 atttctctagccactaggctacttga 278  Q
    ||| |||||||||||||| |||||||    
T  2832073 attcctctagccactaggttacttga 2832048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 48404233 - 48404112
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacacc-cagttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| ||| |||  ||||||| | |||||||| ||  | ||| |||||||||| ||||||| || |||||||| |||||| |||||||||    
T  48404233 atgagcttagctcatttgataagagataatgtataatatgtgtaggtgtcggggttcgaaccccggacacctcacttattcatctttaaggtgaatttct 48404134  T
Q  259 ctagccactaggctacttgaca 280  Q
     |||||||||||||||||||||    
T  48404133 ttagccactaggctacttgaca 48404112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 37889702 - 37889583
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacacc-cagttattcatgtttaagatgaatttct 258  Q
    ||||| |||||||| || || ||||| |||| | | ||| ||||| || ||| |||||||||| ||||||| || |||||||  |||||| |||||||||    
T  37889702 atgagcttagctcacttcgttaaggacaatgtatattatatgcaggggtcggggttcgaaccccggacacctcacttattcacttttaaggtgaatttct 37889603  T
Q  259 ctagccactaggctacttga 278  Q
    ||||||||||||||||||||    
T  37889602 ctagccactaggctacttga 37889583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 279
Target Start/End: Original strand, 37574266 - 37574391
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc-ggacaccc-agttattcatgtttaagatga 252  Q
    ||||| ||||| |||||||| ||||||| ||||||||||   | | ||||| |||||| |||| ||||| || ||||| | |||||||  |||||| |||    
T  37574266 gtccccatgagcttagctcatttggtaagggataatgcatt-tgtatgcaggggccggggttcaaaccccgggcaccccacttattcacctttaaggtga 37574364  T
Q  253 atttctctagccactaggctacttgac 279  Q
    |||||||||||||||||||||||||||    
T  37574365 atttctctagccactaggctacttgac 37574391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 45848012 - 45847902
Alignment:
Q  171 ctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctctagccacta 268  Q
    |||| ||| ||| |||||||||| ||||||||||| |  ||| ||||||| |||||||| |||| |||||||| |||||| ||||||||| ||||| |||    
T  45848012 ctcatttgataagggataatgcataatatgtgcagggatcggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctttagccccta 45847913  T
Q  269 ggctacttgac 279  Q
    |||| ||||||    
T  45847912 ggctgcttgac 45847902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 43362273 - 43362165
Alignment:
Q  152 atagtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaaga 249  Q
    ||||| || ||||| |||||||| ||| ||| |||||||||||||||| | ||| || ||| ||||||| |||||||| |||| |||||||| ||||||     
T  43362273 atagttcccatgagcttagctcatttgctaagggataatgcacaatatattcaggggtcggggttcgaaccccggacaccccacttattcatctttaagg 43362174  T
Q  250 tgaatttct 258  Q
    |||||||||    
T  43362173 tgaatttct 43362165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 25234946 - 25234835
Alignment:
Q  169 agctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggaca-cccagttattcatgtttaagatgaatttctctagccac 266  Q
    |||||| ||| ||| ||||||||||||||| ||| || ||  |  ||||||| ||| |||| ||||||||||||| |||||| |||||||||||| ||||    
T  25234946 agctcatttgataagggataatgcacaataagtgtaggggttgaggttcgaaccccagacaccccagttattcatctttaaggtgaatttctctaaccac 25234847  T
Q  267 taggctacttga 278  Q
    ||| ||||||||    
T  25234846 tagactacttga 25234835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 49811434 - 49811383
Alignment:
Q  229 cccagttattcatgtttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||| |||||||  |||||||||||||||||||||| |||||||||||||||    
T  49811434 cccacttattcacctttaagatgaatttctctagccgctaggctacttgaca 49811383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 27862933 - 27862856
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc 231  Q
    ||||| ||||| |||||||| ||| ||| |||||||||||||| ||||||| ||| || ||||||| |||||||||||    
T  27862933 gtccccatgagcttagctcatttgataagggataatgcacaatttgtgcaggggctggggttcgaaccccggacaccc 27862856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 278
Target Start/End: Complemental strand, 35909146 - 35909005
Alignment:
Q  140 aaaaagaaaataatagtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccgga-gttcgaa-cccggaca-cccagtta 236  Q
    |||||||||| | ||||| | ||||| |||||||| || |||| |||||||||||||||| ||||| || |||| ||||||| ||| |||| |||| |||    
T  35909146 aaaaagaaaagattagtctccatgagcttagctcattttgtaagggataatgcacaatatatgcaggggtcggaggttcgaatcccagacaccccactta 35909047  T
Q  237 ttcatgtttaagatgaatttctctagccactaggctacttga 278  Q
    || || |||||| ||||||| || | |||||| | |||||||    
T  35909046 tttatctttaaggtgaatttttccaaccactaagttacttga 35909005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 2931132 - 2931180
Alignment:
Q  228 acccagttattcatgtttaagatgaatttctctagccactaggctactt 276  Q
    ||||| |||||||| |||||| |||||||||||||||||||| ||||||    
T  2931132 acccacttattcatctttaaggtgaatttctctagccactagactactt 2931180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 276
Target Start/End: Original strand, 8716547 - 8716667
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaac-ccggaca-cccagttattcatgtttaagatga 252  Q
    |||||||| || ||| |||| ||||||| |||||||||||||||||||||| |||||  |||||||| |||||||  ||| |||||||  | |||| |||    
T  8716547 gtccctataagcttatctcatttggtaagggataatgcacaatatgtgcag-ggccgaggttcgaactccggacattccacttattca--tctaaggtga 8716643  T
Q  253 atttctctagccactaggctactt 276  Q
    |||||||||  ||||| |||||||    
T  8716644 atttctctaatcactaagctactt 8716667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 27134845 - 27134797
Alignment:
Q  101 agtaatgcaggaaagaaagaaagaaatataacctatctaaaaaagaaaa 149  Q
    |||| |||||||||||||| |||| |||||||||||| |||||||||||    
T  27134845 agtagtgcaggaaagaaagcaagatatataacctatccaaaaaagaaaa 27134797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 41971402 - 41971314
Alignment:
Q  154 agtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacacccagttattcat 241  Q
    |||||| ||||| |||||||| |||||||  ||||||||||||| ||||||| | |||   |||||| |||||||||||| ||||||||    
T  41971402 agtccccatgagcttagctcatttggtaagtgataatgcacaatttgtgcagcgaccgagattcgaatcccggacacccacttattcat 41971314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 27134983 - 27134945
Alignment:
Q  8 tcacatgcttgcgatgtagtgagctaatgatggtggttt 46  Q
    |||||||||||| || |||||||||||||||||||||||    
T  27134983 tcacatgcttgcaatatagtgagctaatgatggtggttt 27134945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 22525409 - 22525489
Alignment:
Q  182 aaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacaccc-agttattcatgtttaagatgaatttctcta 261  Q
    |||||||||||| | ||| |||||| ||||| ||||||| ||||||||||| | |||||||  |||||||||||||||||||    
T  22525409 aaggataatgcatattatatgcagaagccgg-gttcgaatcccggacaccccacttattcacctttaagatgaatttctcta 22525489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 23448965 - 23449034
Alignment:
Q  154 agtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaaccc 223  Q
    |||||| ||||  |||||| | ||||||| |||||||||||||||||||||| ||  || ||||||||||    
T  23448965 agtccccatgaacttagcttatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccc 23449034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 280
Target Start/End: Complemental strand, 39719817 - 39719780
Alignment:
Q  243 tttaagatgaatttctctagccactaggctacttgaca 280  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  39719817 tttaaggtgaatttctctagccactaggctatttgaca 39719780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 49635425 - 49635474
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgca 204  Q
    ||||| ||||| |||||||| ||||||| |||||||||||||||| ||||    
T  49635425 gtccccatgagtttagctcatttggtaagggataatgcacaatatatgca 49635474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 52366206 - 52366267
Alignment:
Q  161 atgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc 222  Q
    ||||| ||| |||| ||||||| |||||||||||||||||||||| ||  | ||||||||||    
T  52366206 atgagtttaactcatttggtaagggataatgcacaatatgtgcaggggttgaagttcgaacc 52366267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 11322264 - 11322216
Alignment:
Q  101 agtaatgcaggaaagaaagaaagaaatataacctatctaaaaaagaaaa 149  Q
    |||| ||||||| ||||||||||| ||||| ||||||||||| ||||||    
T  11322264 agtagtgcaggagagaaagaaagatatatagcctatctaaaagagaaaa 11322216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 53758975 - 53759042
Alignment:
Q  162 tgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaa-cccggacac 229  Q
    |||| |||||||||||||||| ||||||||||  |||| ||||| || ||||||||||| |||||||||    
T  53758975 tgagtttagctcaattggtaagggataatgca-tatatatgcaggggtcggagttcgaatcccggacac 53759042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 280
Target Start/End: Complemental strand, 121901 - 121769
Alignment:
Q  155 gtccctatgagattagctcaattggtaaaggataatgcacaatatgtgcagaggccggagttcgaacc-------cggacacc-cagttattcatgttta 246  Q
    ||||| ||||| |||||||| ||||||  |||||||||||||||||||||| | |||| |||||||||       |||||||| || |||||||| ||||    
T  121901 gtccccatgagcttagctcatttggtaggggataatgcacaatatgtgcagggaccggggttcgaaccccgggcacggacacctcacttattcat-ttta 121803  T
Q  247 agatgaatttctctagccactaggctacttgaca 280  Q
    || ||||||| |||||||||||||||| ||||||    
T  121802 aggtgaatttatctagccactaggctatttgaca 121769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 279
Target Start/End: Original strand, 146799 - 146891
Alignment:
Q  188 aatgcacaatatgtgcagaggccggagttcgaacccg-gacacccagttattcatgtttaagatgaatttctctagccactaggctacttgac 279  Q
    |||||||||||||||||| |   |||||| ||||||  ||||||||  | ||||| || ||| ||||||||||||||| ||| ||||||||||    
T  146799 aatgcacaatatgtgcagggattggagtttgaaccctagacacccacctgttcatcttaaaggtgaatttctctagccgctacgctacttgac 146891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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