View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11287_low_19 (Length: 262)

Name: NF11287_low_19
Description: NF11287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11287_low_19
NF11287_low_19
[»] chr8 (46 HSPs)
chr8 (3-166)||(18049587-18049750)
chr8 (1-160)||(18428146-18428305)
chr8 (1-161)||(28254427-28254587)
chr8 (1-170)||(15256213-15256384)
chr8 (1-163)||(599883-600044)
chr8 (1-163)||(5730817-5730978)
chr8 (1-165)||(9797111-9797275)
chr8 (1-168)||(34799074-34799241)
chr8 (1-162)||(28254811-28254971)
chr8 (31-163)||(41260271-41260402)
chr8 (1-163)||(16578481-16578642)
chr8 (1-162)||(42035773-42035933)
chr8 (1-166)||(9796723-9796887)
chr8 (1-161)||(2208716-2208876)
chr8 (1-169)||(6115495-6115663)
chr8 (1-163)||(35427197-35427358)
chr8 (31-163)||(15255853-15255984)
chr8 (1-163)||(599532-599693)
chr8 (20-171)||(16578100-16578250)
chr8 (1-163)||(34799468-34799629)
chr8 (1-163)||(41260646-41260807)
chr8 (1-165)||(7911001-7911164)
chr8 (3-160)||(18049978-18050134)
chr8 (1-160)||(35694255-35694421)
chr8 (1-137)||(5731197-5731332)
chr8 (1-162)||(35693869-35694031)
chr8 (1-134)||(26252838-26252970)
chr8 (1-163)||(7910616-7910778)
chr8 (1-137)||(42036156-42036292)
chr8 (73-163)||(9930112-9930202)
chr8 (110-160)||(35426845-35426895)
chr8 (70-163)||(18674148-18674241)
chr8 (82-160)||(28877354-28877432)
chr8 (1-58)||(35426917-35426974)
chr8 (88-160)||(18805167-18805238)
chr8 (73-156)||(28876910-28876993)
chr8 (112-163)||(33742922-33742973)
chr8 (110-169)||(34541040-34541099)
chr8 (118-168)||(9178135-9178185)
chr8 (110-172)||(41681125-41681187)
chr8 (110-163)||(44831247-44831300)
chr8 (112-168)||(11656450-11656506)
chr8 (111-163)||(11656950-11657002)
chr8 (111-163)||(31133220-31133272)
chr8 (1-45)||(35163815-35163859)
chr8 (88-164)||(41681604-41681680)
[»] chr7 (55 HSPs)
chr7 (1-168)||(48247976-48248143)
chr7 (1-161)||(9181534-9181693)
chr7 (1-160)||(25637583-25637741)
chr7 (1-162)||(15712366-15712526)
chr7 (1-163)||(16081299-16081460)
chr7 (1-163)||(786782-786944)
chr7 (1-160)||(26026703-26026861)
chr7 (5-169)||(28687587-28687750)
chr7 (1-160)||(5745642-5745800)
chr7 (1-167)||(27245199-27245365)
chr7 (37-163)||(7732908-7733033)
chr7 (1-163)||(11971334-11971499)
chr7 (1-160)||(26026320-26026479)
chr7 (1-161)||(27245589-27245748)
chr7 (1-160)||(14311672-14311830)
chr7 (3-163)||(25637197-25637357)
chr7 (1-169)||(7732482-7732649)
chr7 (70-168)||(16917708-16917806)
chr7 (1-163)||(2758083-2758244)
chr7 (1-163)||(16081684-16081845)
chr7 (1-162)||(39388651-39388813)
chr7 (1-167)||(24929688-24929858)
chr7 (4-157)||(35161189-35161342)
chr7 (1-169)||(26048332-26048498)
chr7 (1-160)||(28687884-28688041)
chr7 (1-163)||(9181794-9181958)
chr7 (1-163)||(48247587-48247752)
chr7 (1-163)||(34595157-34595318)
chr7 (73-160)||(787242-787329)
chr7 (71-161)||(5334273-5334363)
chr7 (1-160)||(26047960-26048109)
chr7 (70-163)||(5333880-5333973)
chr7 (2-162)||(9394117-9394274)
chr7 (1-160)||(11973787-11973945)
chr7 (1-163)||(5746024-5746186)
chr7 (75-163)||(39136991-39137079)
chr7 (72-156)||(35160660-35160746)
chr7 (73-168)||(39136681-39136776)
chr7 (4-165)||(4477700-4477860)
chr7 (73-163)||(49064034-49064124)
chr7 (1-137)||(14311341-14311477)
chr7 (98-168)||(40669689-40669759)
chr7 (80-174)||(35288891-35288986)
chr7 (73-163)||(45815344-45815431)
chr7 (80-163)||(2658839-2658922)
chr7 (109-160)||(5184431-5184482)
chr7 (72-154)||(18535338-18535419)
chr7 (110-168)||(38859133-38859191)
chr7 (73-163)||(49064176-49064266)
chr7 (110-163)||(19590525-19590578)
chr7 (77-173)||(33880609-33880706)
chr7 (1-62)||(33880970-33881030)
chr7 (116-161)||(34594585-34594630)
chr7 (83-160)||(35578902-35578979)
chr7 (81-161)||(9393738-9393818)
[»] chr2 (66 HSPs)
chr2 (1-163)||(11539637-11539799)
chr2 (1-163)||(33920996-33921158)
chr2 (3-163)||(43160397-43160557)
chr2 (1-163)||(20127736-20127898)
chr2 (1-163)||(38008336-38008497)
chr2 (1-163)||(6949451-6949613)
chr2 (1-168)||(42192235-42192401)
chr2 (1-169)||(62951-63118)
chr2 (1-163)||(4356141-4356302)
chr2 (1-163)||(4809264-4809425)
chr2 (1-163)||(16952935-16953098)
chr2 (1-163)||(17060906-17061069)
chr2 (3-169)||(38007944-38008110)
chr2 (1-163)||(42192627-42192789)
chr2 (1-160)||(13315496-13315658)
chr2 (1-159)||(16175734-16175892)
chr2 (1-163)||(44219644-44219805)
chr2 (1-160)||(15551059-15551218)
chr2 (1-169)||(20128122-20128289)
chr2 (1-163)||(11540023-11540184)
chr2 (1-165)||(4355753-4355916)
chr2 (1-160)||(15550676-15550835)
chr2 (1-160)||(33920615-33920773)
chr2 (71-163)||(5560051-5560143)
chr2 (3-163)||(13399807-13399965)
chr2 (1-160)||(9330179-9330338)
chr2 (1-163)||(24140064-24140220)
chr2 (1-162)||(16953319-16953479)
chr2 (1-163)||(43216094-43216255)
chr2 (1-137)||(4808905-4809040)
chr2 (1-160)||(43160012-43160171)
chr2 (1-163)||(649527-649687)
chr2 (81-161)||(649801-649881)
chr2 (1-160)||(63343-63507)
chr2 (1-163)||(32418159-32418318)
chr2 (1-131)||(13399454-13399583)
chr2 (24-167)||(6949850-6949994)
chr2 (20-171)||(32418550-32418700)
chr2 (70-163)||(44220098-44220191)
chr2 (4-163)||(31797166-31797323)
chr2 (71-163)||(25336054-25336146)
chr2 (2-163)||(28143416-28143575)
chr2 (101-160)||(9329915-9329974)
chr2 (1-62)||(5560935-5560996)
chr2 (77-163)||(14942306-14942392)
chr2 (73-160)||(20495196-20495283)
chr2 (73-123)||(5035903-5035953)
chr2 (80-165)||(35779706-35779791)
chr2 (1-62)||(43215809-43215870)
chr2 (77-153)||(2190536-2190612)
chr2 (110-168)||(20440523-20440581)
chr2 (5-58)||(9329985-9330038)
chr2 (110-163)||(20444749-20444802)
chr2 (1-61)||(22445741-22445801)
chr2 (112-168)||(28616608-28616664)
chr2 (102-160)||(9329833-9329892)
chr2 (80-163)||(28617076-28617159)
chr2 (110-168)||(26538571-26538629)
chr2 (110-163)||(1978601-1978654)
chr2 (80-169)||(18451293-18451382)
chr2 (88-160)||(3824179-3824251)
chr2 (88-160)||(8425358-8425430)
chr2 (111-163)||(18450830-18450882)
chr2 (2-58)||(18450935-18450991)
chr2 (77-169)||(22445633-22445724)
chr2 (88-164)||(43058332-43058408)
[»] chr5 (50 HSPs)
chr5 (1-163)||(28290029-28290190)
chr5 (1-168)||(19291351-19291518)
chr5 (3-162)||(8419008-8419165)
chr5 (1-163)||(15029694-15029855)
chr5 (31-163)||(18149733-18149864)
chr5 (1-163)||(18150108-18150270)
chr5 (1-175)||(38901027-38901198)
chr5 (1-163)||(4967154-4967317)
chr5 (1-163)||(15115480-15115638)
chr5 (1-163)||(28289684-28289845)
chr5 (1-168)||(21371081-21371247)
chr5 (1-161)||(39083361-39083521)
chr5 (6-159)||(38900648-38900800)
chr5 (83-160)||(14340401-14340478)
chr5 (1-125)||(5161620-5161744)
chr5 (4-160)||(4966819-4966973)
chr5 (73-160)||(21370689-21370776)
chr5 (9-162)||(32697616-32697771)
chr5 (171-241)||(31618967-31619037)
chr5 (1-160)||(14340792-14340953)
chr5 (2-162)||(10721787-10721945)
chr5 (73-163)||(22651767-22651857)
chr5 (2-163)||(41834445-41834605)
chr5 (73-160)||(20266371-20266458)
chr5 (1-161)||(22651347-22651506)
chr5 (70-163)||(16752582-16752675)
chr5 (2-163)||(27307061-27307220)
chr5 (24-163)||(5161976-5162115)
chr5 (73-163)||(17260676-17260766)
chr5 (70-168)||(27307513-27307611)
chr5 (2-137)||(32305844-32305977)
chr5 (82-163)||(28495296-28495377)
chr5 (110-165)||(164189-164244)
chr5 (110-163)||(24362328-24362381)
chr5 (80-164)||(8647437-8647521)
chr5 (88-164)||(19359135-19359211)
chr5 (73-161)||(28595182-28595270)
chr5 (110-165)||(5819421-5819476)
chr5 (110-169)||(18183461-18183520)
chr5 (2-162)||(28494845-28495003)
chr5 (113-163)||(15708971-15709021)
chr5 (20-62)||(21370794-21370836)
chr5 (110-163)||(2865247-2865300)
chr5 (1-62)||(14340480-14340541)
chr5 (92-161)||(16753045-16753114)
chr5 (110-163)||(19359628-19359681)
chr5 (110-163)||(24331559-24331612)
chr5 (80-164)||(4623147-4623231)
chr5 (73-137)||(13557018-13557081)
chr5 (110-170)||(15372365-15372425)
[»] chr4 (68 HSPs)
chr4 (1-166)||(34789379-34789543)
chr4 (1-165)||(21034233-21034397)
chr4 (1-163)||(26974283-26974445)
chr4 (1-169)||(56077709-56077876)
chr4 (1-160)||(45838932-45839092)
chr4 (1-166)||(28465466-28465630)
chr4 (1-163)||(14440213-14440374)
chr4 (1-161)||(54440954-54441113)
chr4 (1-163)||(12593024-12593185)
chr4 (3-160)||(28166007-28166163)
chr4 (1-163)||(46736655-46736816)
chr4 (1-160)||(41114160-41114320)
chr4 (1-163)||(19528869-19529031)
chr4 (1-161)||(34789767-34789927)
chr4 (1-160)||(34807524-34807682)
chr4 (1-163)||(55677342-55677504)
chr4 (1-163)||(46737040-46737201)
chr4 (1-160)||(6616675-6616834)
chr4 (1-160)||(14439831-14439989)
chr4 (1-163)||(21034621-21034783)
chr4 (1-163)||(34807116-34807278)
chr4 (1-163)||(33689829-33689989)
chr4 (1-169)||(12593408-12593575)
chr4 (1-161)||(24851850-24852010)
chr4 (1-170)||(28465074-28465242)
chr4 (4-169)||(45838541-45838705)
chr4 (1-161)||(54440573-54440730)
chr4 (1-169)||(19529078-19529246)
chr4 (72-163)||(24851316-24851407)
chr4 (1-160)||(36168332-36168493)
chr4 (72-163)||(41608870-41608961)
chr4 (75-161)||(1397597-1397683)
chr4 (70-160)||(33777635-33777725)
chr4 (1-169)||(36168716-36168883)
chr4 (1-169)||(35643549-35643728)
chr4 (1-160)||(41608377-41608536)
chr4 (2-137)||(35193334-35193467)
chr4 (1-160)||(16214880-16215038)
chr4 (70-137)||(17504412-17504479)
chr4 (71-166)||(30597973-30598068)
chr4 (31-167)||(33778027-33778162)
chr4 (24-137)||(6617070-6617182)
chr4 (36-169)||(26974664-26974797)
chr4 (73-160)||(229164-229251)
chr4 (90-161)||(44219377-44219448)
chr4 (1-160)||(229544-229702)
chr4 (73-162)||(23986521-23986610)
chr4 (1-62)||(24851565-24851626)
chr4 (1-162)||(18965141-18965301)
chr4 (2-163)||(17503974-17504133)
chr4 (110-169)||(11153639-11153698)
chr4 (81-163)||(35193766-35193848)
chr4 (81-167)||(40160554-40160640)
chr4 (73-163)||(51309961-51310051)
chr4 (83-160)||(10795777-10795854)
chr4 (88-161)||(24336234-24336307)
chr4 (70-163)||(40160094-40160187)
chr4 (110-162)||(20958351-20958403)
chr4 (97-161)||(35644042-35644106)
chr4 (110-165)||(16691563-16691618)
chr4 (88-163)||(24335761-24335836)
chr4 (110-168)||(22434174-22434232)
chr4 (110-164)||(46193404-46193458)
chr4 (110-163)||(15523235-15523288)
chr4 (110-163)||(23494935-23494988)
chr4 (110-163)||(25938163-25938216)
chr4 (89-158)||(31297161-31297230)
chr4 (89-161)||(51641302-51641374)
[»] chr3 (84 HSPs)
chr3 (1-165)||(51828342-51828506)
chr3 (1-163)||(47431696-47431858)
chr3 (1-160)||(51473240-51473399)
chr3 (1-163)||(41998229-41998391)
chr3 (1-163)||(38535309-38535470)
chr3 (1-159)||(55389609-55389766)
chr3 (1-163)||(2051295-2051460)
chr3 (1-165)||(43678293-43678456)
chr3 (1-160)||(49951549-49951707)
chr3 (1-162)||(46013807-46013968)
chr3 (1-166)||(51828925-51829089)
chr3 (1-161)||(32730774-32730933)
chr3 (1-169)||(40839037-40839204)
chr3 (1-160)||(44676857-44677015)
chr3 (24-163)||(49720769-49720907)
chr3 (1-164)||(50662797-50662959)
chr3 (1-170)||(52375320-52375488)
chr3 (1-161)||(52237202-52237361)
chr3 (1-163)||(16701174-16701338)
chr3 (1-164)||(40275092-40275256)
chr3 (1-161)||(30513724-30513883)
chr3 (3-163)||(330223-330382)
chr3 (1-160)||(22370599-22370758)
chr3 (1-163)||(51828539-51828701)
chr3 (31-169)||(329840-329977)
chr3 (1-163)||(51827957-51828118)
chr3 (1-163)||(52375716-52375877)
chr3 (1-163)||(49720371-49720532)
chr3 (70-169)||(14654193-14654292)
chr3 (1-166)||(40275479-40275642)
chr3 (1-173)||(55389982-55390154)
chr3 (1-163)||(25534890-25535052)
chr3 (1-160)||(40838655-40838813)
chr3 (1-167)||(49951931-49952096)
chr3 (1-163)||(14654576-14654735)
chr3 (1-163)||(34104638-34104798)
chr3 (1-167)||(44676468-44676633)
chr3 (1-161)||(52236818-52236977)
chr3 (1-157)||(34105033-34105190)
chr3 (1-163)||(38535680-38535841)
chr3 (1-163)||(46013422-46013583)
chr3 (1-160)||(32730392-32730550)
chr3 (1-164)||(43678669-43678831)
chr3 (1-163)||(51472855-51473016)
chr3 (36-160)||(16689361-16689484)
chr3 (1-163)||(2044271-2044432)
chr3 (37-163)||(41998650-41998774)
chr3 (78-150)||(39010482-39010554)
chr3 (70-169)||(43222384-43222483)
chr3 (2-161)||(36701482-36701640)
chr3 (1-162)||(43222774-43222935)
chr3 (72-163)||(33412609-33412700)
chr3 (73-163)||(36701106-36701196)
chr3 (2-166)||(55192115-55192277)
chr3 (2-162)||(37075687-37075848)
chr3 (70-163)||(39010075-39010168)
chr3 (70-163)||(49407796-49407889)
chr3 (70-163)||(50900980-50901073)
chr3 (2-163)||(27200078-27200237)
chr3 (70-160)||(27199705-27199795)
chr3 (2-162)||(49408169-49408326)
chr3 (110-171)||(30104474-30104535)
chr3 (81-162)||(37076138-37076219)
chr3 (2-163)||(5137365-5137526)
chr3 (81-161)||(50900534-50900614)
chr3 (88-163)||(20840560-20840635)
chr3 (110-169)||(32535455-32535514)
chr3 (110-169)||(37727422-37727481)
chr3 (80-167)||(39556039-39556126)
chr3 (70-136)||(8874139-8874205)
chr3 (110-163)||(23644462-23644515)
chr3 (88-177)||(25612447-25612536)
chr3 (110-174)||(29801908-29801972)
chr3 (110-169)||(24301048-24301107)
chr3 (80-163)||(39555578-39555661)
chr3 (2-160)||(8873694-8873850)
chr3 (88-165)||(12141162-12141239)
chr3 (88-169)||(23644935-23645016)
chr3 (110-163)||(27393661-27393714)
chr3 (110-163)||(31779144-31779197)
chr3 (112-160)||(5136983-5137031)
chr3 (112-164)||(25853233-25853285)
chr3 (2-62)||(37847206-37847265)
chr3 (115-163)||(43973441-43973489)
[»] chr6 (40 HSPs)
chr6 (1-164)||(25472397-25472560)
chr6 (1-163)||(5114468-5114629)
chr6 (1-168)||(30251076-30251243)
chr6 (1-169)||(31573714-31573886)
chr6 (1-160)||(24640570-24640728)
chr6 (1-169)||(31073527-31073694)
chr6 (3-168)||(5120856-5121020)
chr6 (3-160)||(25468852-25469010)
chr6 (1-163)||(29891465-29891630)
chr6 (1-163)||(31574110-31574271)
chr6 (22-164)||(31073142-31073290)
chr6 (31-165)||(28636290-28636422)
chr6 (1-163)||(29891080-29891241)
chr6 (2-163)||(35163572-35163733)
chr6 (110-166)||(22534217-22534273)
chr6 (2-168)||(32836383-32836547)
chr6 (1-90)||(28636581-28636669)
chr6 (1-62)||(30250791-30250852)
chr6 (91-174)||(31242795-31242878)
chr6 (112-169)||(10900424-10900481)
chr6 (81-160)||(35163187-35163266)
chr6 (109-167)||(30250717-30250775)
chr6 (110-163)||(28472637-28472690)
chr6 (110-163)||(29859826-29859879)
chr6 (80-160)||(3835188-3835268)
chr6 (87-170)||(835695-835778)
chr6 (88-163)||(11445457-11445532)
chr6 (110-165)||(18257629-18257684)
chr6 (90-161)||(18297662-18297733)
chr6 (80-163)||(20741100-20741183)
chr6 (88-163)||(23073999-23074074)
chr6 (81-160)||(32836010-32836089)
chr6 (73-163)||(835394-835484)
chr6 (112-165)||(4811370-4811423)
chr6 (110-167)||(11277074-11277131)
chr6 (110-163)||(12935157-12935210)
chr6 (110-163)||(22219845-22219898)
chr6 (88-169)||(33096082-33096163)
chr6 (88-160)||(18504922-18504994)
chr6 (73-161)||(33095716-33095804)
[»] chr1 (69 HSPs)
chr1 (1-161)||(34555765-34555926)
chr1 (1-163)||(9992154-9992316)
chr1 (1-163)||(37505067-37505229)
chr1 (1-164)||(10278935-10279094)
chr1 (1-160)||(21938566-21938724)
chr1 (3-165)||(9992542-9992703)
chr1 (1-162)||(44954611-44954771)
chr1 (1-168)||(16299067-16299232)
chr1 (1-160)||(17641749-17641912)
chr1 (1-163)||(30786771-30786933)
chr1 (3-169)||(50305169-50305337)
chr1 (1-161)||(10278550-10278710)
chr1 (1-163)||(52335895-52336056)
chr1 (1-163)||(34555379-34555542)
chr1 (1-169)||(37505453-37505619)
chr1 (1-168)||(8229632-8229801)
chr1 (1-167)||(23340179-23340344)
chr1 (1-163)||(1837505-1837666)
chr1 (1-163)||(2868093-2868254)
chr1 (1-161)||(44582442-44582603)
chr1 (70-160)||(37421397-37421488)
chr1 (70-160)||(29439375-29439465)
chr1 (37-163)||(29438930-29439056)
chr1 (70-163)||(30787251-30787344)
chr1 (1-160)||(44954229-44954387)
chr1 (1-160)||(37421163-37421323)
chr1 (1-161)||(2867913-2868072)
chr1 (1-163)||(4080021-4080182)
chr1 (1-160)||(8230026-8230184)
chr1 (2-160)||(39485068-39485224)
chr1 (2-160)||(45048158-45048314)
chr1 (1-162)||(16298683-16298843)
chr1 (1-161)||(1744330-1744488)
chr1 (70-161)||(50304441-50304532)
chr1 (1-165)||(443936-444099)
chr1 (1-161)||(44582059-44582218)
chr1 (1-160)||(6224700-6224860)
chr1 (1-125)||(17641403-17641526)
chr1 (73-163)||(50926697-50926787)
chr1 (73-162)||(23526659-23526748)
chr1 (73-161)||(50926232-50926320)
chr1 (71-163)||(17088593-17088685)
chr1 (73-169)||(44291295-44291391)
chr1 (73-169)||(44802627-44802723)
chr1 (4-163)||(29021252-29021411)
chr1 (1-164)||(9833537-9833699)
chr1 (74-166)||(25274753-25274845)
chr1 (81-160)||(45048599-45048678)
chr1 (77-167)||(29020876-29020966)
chr1 (110-171)||(29870111-29870172)
chr1 (90-163)||(39843497-39843570)
chr1 (83-160)||(44291777-44291854)
chr1 (73-161)||(23526986-23527074)
chr1 (80-160)||(50419393-50419473)
chr1 (110-169)||(33144411-33144470)
chr1 (88-163)||(50419731-50419806)
chr1 (81-163)||(17088146-17088228)
chr1 (110-168)||(26859054-26859112)
chr1 (110-164)||(29307434-29307488)
chr1 (110-163)||(5540310-5540363)
chr1 (110-167)||(8679033-8679090)
chr1 (110-163)||(18984611-18984664)
chr1 (1-58)||(30787157-30787214)
chr1 (110-163)||(39154512-39154565)
chr1 (110-163)||(50970278-50970331)
chr1 (110-163)||(52268290-52268343)
chr1 (110-162)||(5539817-5539869)
chr1 (110-162)||(8678542-8678594)
chr1 (89-165)||(9844742-9844818)
[»] scaffold0712 (2 HSPs)
scaffold0712 (3-164)||(6391-6551)
scaffold0712 (1-160)||(6776-6939)
[»] scaffold0709 (2 HSPs)
scaffold0709 (3-164)||(6409-6569)
scaffold0709 (1-160)||(6794-6957)
[»] scaffold0097 (2 HSPs)
scaffold0097 (4-169)||(46655-46820)
scaffold0097 (1-163)||(46266-46428)
[»] scaffold0007 (4 HSPs)
scaffold0007 (73-163)||(210793-210883)
scaffold0007 (73-161)||(205823-205911)
scaffold0007 (73-160)||(204931-205018)
scaffold0007 (73-160)||(205361-205448)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-62)||(78417-78478)
[»] scaffold1432 (1 HSPs)
scaffold1432 (70-163)||(518-611)
[»] scaffold0951 (1 HSPs)
scaffold0951 (110-163)||(1667-1720)
[»] scaffold0108 (1 HSPs)
scaffold0108 (73-164)||(15554-15645)
[»] scaffold0176 (1 HSPs)
scaffold0176 (118-168)||(19121-19171)
[»] scaffold0057 (1 HSPs)
scaffold0057 (86-160)||(61926-62000)
[»] scaffold0021 (1 HSPs)
scaffold0021 (73-163)||(159337-159427)


Alignment Details
Target: chr8 (Bit Score: 119; Significance: 7e-61; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 18049750 - 18049587
Alignment:
Q  3 taaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaa 102  Q
    |||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  18049750 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaa 18049651  T
Q  103 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaa 166  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  18049650 aaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattgagccaaa 18049587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 18428146 - 18428305
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| ||||||||||||||||| |||||||||       |||||||||||||||||||||||||||||||    
T  18428146 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggagtaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 18428245  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18428246 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 18428305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 28254587 - 28254427
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||| ||||    
T  28254587 actaaaaatgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcaattt 28254488  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  28254487 aaaatagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaag 28254427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 15256213 - 15256384
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn--catatagtttaaggacgattttgttcgat 98  Q
    ||||||| |||||||||| |||||||||| |||| |||||||||||||| ||||| ||||||         |||||||||||||||||||||||||||||    
T  15256213 actaaaattgtcatttctgtgcgtttctggagttggaaatagggagatatgactagaactgcaaaaaaaaacatatagtttaaggacgattttgttcgat 15256312  T
Q  99 ttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaat 170  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  15256313 ttaaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaagcctaaaaat 15256384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 599883 - 600044
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||||||||||||||||||||| | || ||||||| |||||| ||||||||||||       |||||||||||||||||||||||||| ||||    
T  599883 actaaaactgtcatttctatgcgtttctggaattggaaatagagagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttccattt 599981  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  599982 aaaaaagatatgaccattttcgttagttggtcaaaatggtaggaccaaaagtgtaattaagcc 600044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5730978 - 5730817
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| | |||||||| ||||| |||||||||| |||||||||||| ||       ||||||||||||||||||||||||| |||||    
T  5730978 actaaaactgtcatttctgtacgtttctggagttaaaaatagggaggtaggactaaaacagcaaaaaa-catatagtttaaggacgattttgtttgattt 5730880  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  5730879 aaaaaagataggactattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 5730817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 9797111 - 9797275
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| ||||||| || |||| |||||||| |||||| |||||||||||       |||||||||||||||||||||| || |||||    
T  9797111 actaaaactgtcatttctgtgcgtttatggagttggaaataggtagatagaactaaaactgcaaaaaaacatatagtttaaggacgattttatttgattt 9797210  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  9797211 aaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaatccaa 9797275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 34799241 - 34799074
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||| |||||||| | ||||||| || |||| |||||||||||||||||||||||||||       |||||||||||||||||| ||||||||||||    
T  34799241 actaaaattgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgactttgttcgattt 34799142  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    |||||| |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  34799141 aaaaaaaataggaccattttcatgagttggtcaaaatggtatgaccaaaagtgtaattaagcctaaaa 34799074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 28254811 - 28254971
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||    
T  28254811 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaatt-atatagtttagggacgattttgttcgattt 28254909  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    |||| || |||||||| ||||||||||||||||||||   ||||||||||||||||||||||    
T  28254910 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 28254971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 31 - 163
Target Start/End: Complemental strand, 41260402 - 41260271
Alignment:
Q  31 agttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 130  Q
    |||| |||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41260402 agttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttgg 41260304  T
Q  131 tcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||||||||||||||||||    
T  41260303 tcaaaatggtaggaccaaaagtgtaattaagcc 41260271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 16578481 - 16578642
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||   ||| |||||||||||||||||||||||||||       |||||||||||| || |||||||||||||||    
T  16578481 actaaaactgtcatttctgtgcgtttctagtgttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaatgatgattttgttcgattt 16578579  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
     |||||||||  |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  16578580 gaaaaagatataaccattttcgtgagttcgtcaaaatggtaggaccaaaagtgtaattaagcc 16578642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 42035933 - 42035773
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||||||| || |||||||||||||||||||||||||||| |||        |||||||||| |||||||||||||||||||    
T  42035933 actaaaactgtcatttttgtgcgtttatggagttagaaatagggagataggactaaaattgcaaaatat-atatagtttatggacgattttgttcgattt 42035835  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    |||| || ||| |||||||||||||||||||||||||   ||||||||||||||||||||||    
T  42035834 aaaagaggtagaaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 42035773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 9796887 - 9796723
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| ||||||| || |||| |||||||||||||| ||||||||||||       ||||||||||| ||| |||||||||||||||    
T  9796887 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaa-catatagtttatggatgattttgttcgattt 9796789  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaa 166  Q
    |||| || |||||||| ||| ||||||||||||||||   ||||||||||||||||||||||||||    
T  9796788 aaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccaaa 9796723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 2208876 - 2208716
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||| | |||||| | |||||||| | ||  ||||||||||||| |||||||| ||         ||||||||||||||||||||||||||||||    
T  2208876 actaaaactattatttctgtacgtttctggaattgaaaatagggagatatgactaaaattgtaaaaaaatatatagtttaaggacgattttgttcgattt 2208777  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||    
T  2208776 aaaaaagataggacaattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaag 2208716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 6115495 - 6115663
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||  ||||  ||||| |||||||| ||||||||| |       ||||||||||| |||||||||||||||||||    
T  6115495 actaaaactgtcatttctgtgcgtttcttgagttgaaaataaggagatagaactaaaactacaaaaaaacatatagtttagggacgattttgttcgattt 6115594  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||| || |||||||| ||||| |||||||||||||||  |||||||||||| |||||||||| |||||    
T  6115595 aaaagaggtaggaccaatttcgcgagttggtcaaaatacaaggaccaaaagtataattaagcctaaaaa 6115663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 35427197 - 35427358
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| ||||||| || |||| ||||||||||||| |||||||||||||        ||||| |||| ||||||||||||||| |||    
T  35427197 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagatgggactaaaactgcaaaaaat-atataatttagggacgattttgttcggttt 35427295  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || ||| |||||||||||||||||||||||||   |||||||||||||||||||||||    
T  35427296 aaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcc 35427358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 163
Target Start/End: Complemental strand, 15255984 - 15255853
Alignment:
Q  31 agttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 130  Q
    |||| |||||||||||||||||||||||||||       ||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||||||    
T  15255984 agttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttgg 15255886  T
Q  131 tcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||   |||||||||||||||||||||||    
T  15255885 tcaaaatgcaaggaccaaaagtgtaattaagcc 15255853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 599693 - 599532
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| |||||||||||||| ||||||||||||       |||||| |||| ||| |||||||||||||||    
T  599693 actaaaactgtcatttgtgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaa-catataatttagggatgattttgttcgattt 599595  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || || ||||| ||||||||||||||||||||   |||||||||| ||||||||||||    
T  599594 aaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcc 599532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 171
Target Start/End: Complemental strand, 16578250 - 16578100
Alignment:
Q  20 tgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattt 119  Q
    |||||||||| |||| |||||||||||||||||| ||||||||       |||||| |||| ||||||||||||||||||||||| || |||||||| ||    
T  16578250 tgcgtttctggagttggaaatagggagataggaccaaaactgcaaaaaa-catataatttagggacgattttgttcgatttaaaagaggtaggaccaatt 16578152  T
Q  120 tcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaata 171  Q
    ||||||||||||||||||   || ||||||| |||||||||||| |||||||    
T  16578151 tcgtgagttggtcaaaatgcaagaaccaaaaatgtaattaagcctaaaaata 16578100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 34799468 - 34799629
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||| |||||| | ||||||| || |||| |||||||| ||||||||||||||||||       ||||||||||| |||| ||||||||||||||    
T  34799468 actaaaactatcatttatgtgcgtttatggagttggaaataggaagataggactaaaactgcaaaaaa-catatagtttagggacaattttgttcgattt 34799566  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||| |||||| | |||||||||||   |||||||||||||||||||||||    
T  34799567 aaaagaggtaggaccaatttcgttaattggtcaaaatgaaaggaccaaaagtgtaattaagcc 34799629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 41260646 - 41260807
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| ||||  ||||||||||||||||||||||||||       ||||||||||| |||||||||||||||||||    
T  41260646 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 41260744  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || || || || |||||||||||| |||||||   | |||||||||| ||||||||||    
T  41260745 aaaagaggtatgatcaatttcgtgagttgatcaaaatgcaatgaccaaaagtataattaagcc 41260807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 7911001 - 7911164
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| ||||||| || ||||  |||||| | |||| ||||||||||||        |||||||||| |||||||||||||||||||    
T  7911001 actaaaactgtcatttctgtgcgtttatggagttgaaaatagagggatatgactaaaactgcaaaaaat-atatagtttagggacgattttgttcgattt 7911099  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    |||| || ||| |||||||||||||||||||||||||   ||||  |||||||||||||||||||    
T  7911100 aaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggattaaaagtgtaattaagccaa 7911164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 18049978 - 18050134
Alignment:
Q  3 taaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaa 102  Q
    ||||||||| |||||| |||||||||| ||||  |||||||||||||||| |||||| ||       ||||||||||| |||||||||||||||||||||    
T  18049978 taaaactgttatttctgtgcgtttctggagttgaaaatagggagataggattaaaacagcaaaaaa-catatagtttagggacgattttgttcgatttaa 18050076  T
Q  103 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    || || || ||||| ||||||||||||||||||||   |||||||||| |||||||||    
T  18050077 aagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 18050134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 35694255 - 35694421
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnnca-------tatagtttaaggacgattttgt 93  Q
    |||||||||||||||| | |||||||||| |||| |||||||||||||| ||||||||| ||        |       ||||||||||||||||||||||    
T  35694255 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataagactaaaacagcaaaaaaaaaaaaaaaatatagtttaaggacgattttgt 35694354  T
Q  94 tcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||||||  |||||||||||| ||||||| |||||||| | ||||||||||||||||||||    
T  35694355 tcgatttaaaaaatgtaggaccatttttgtgagttagtcaaaatggaaggaccaaaagtgtaattaa 35694421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 5731197 - 5731332
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| ||||  |||||||||||||| |||||||||||       ||||||||||| |||||||||||||||||||    
T  5731197 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatagaactaaaactgcaaaaaa-catatagtttatggacgattttgttcgattt 5731295  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaat 137  Q
    | ||||| ||| |||| |||| |||||||||||||||    
T  5731296 ataaaaggtagaaccaatttcctgagttggtcaaaat 5731332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 35694031 - 35693869
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactg-cnnnnnnncatatagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||| | |||||||||| |||| ||||||||||||||||||||||||||          |||||||||| |||||||||| |||||||    
T  35694031 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgaaaaaaatatatatagtttatggacgattttattcgatt 35693932  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    ||||| || ||| | ||||||||| | |||||||||||   |||| |||||||||||||||||    
T  35693931 taaaagaggtagaatcattttcgtaaattggtcaaaatgcaaggatcaaaagtgtaattaagc 35693869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 26252970 - 26252838
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||| |||||||||||  ||||||||| |||| |||||||||||||||||||||||||||       ||||||||||| |||||||||||||||||||    
T  26252970 actaaatctgtcatttctgagcgtttctggagttggaaatagggagataggactaaaactgc-acaaaacatatagtttagggacgattttgttcgattt 26252872  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaa 134  Q
    |||| ||||   |||| |||||||| || |||||    
T  26252871 aaaagagatgttaccaatttcgtgaattagtcaa 26252838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 7910778 - 7910616
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagata--ggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgat 98  Q
    |||||||||||||||||| ||| |||||  |||||||||||  ||||||  |||||||| ||||       |||||| |||| |||||||||||||||||    
T  7910778 actaaaactgtcatttctgtgcatttcttgagttagaaataaagagatataggactaaa-ctgcaaaaaa-catataatttagggacgattttgttcgat 7910681  T
Q  99 ttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| || ||  ||||||||||||||||| |||||||   |||||||||| ||||||||||||    
T  7910680 ttaaaagaggtataaccattttcgtgagttgatcaaaatgtgaggaccaaaaatgtaattaagcc 7910616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 42036156 - 42036292
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||| |||||| |||| |||||| |   ||| ||||||||||||       ||||||||||| |||||||||||||||||||    
T  42036156 actaaaactgtcatttttgtgcatttctggagttggaaatatgagaatacgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 42036255  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaat 137  Q
    |||| || || || ||||||||| |||||||||||||    
T  42036256 aaaagaggtaagatcattttcgtaagttggtcaaaat 42036292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 9930112 - 9930202
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| |||||| ||||||||| |||| |||| |  ||||||| |||||||||| || |||||||  |||||||||||||||||||||||    
T  9930112 atagttgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 9930202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 35426895 - 35426845
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  35426895 aggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaa 35426845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 18674241 - 18674148
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||| |||||||||||||||||||||||  |  || |||| |||||||| ||||||||| |   |||||||| ||||||||||||||    
T  18674241 catatagtttagggacgattttgttcgatttaaaagtggaagaaccaatttcgtgaattggtcaaagtgcaaggaccaagagtgtaattaagcc 18674148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 28877354 - 28877432
Alignment:
Q  82 ggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||| ||||||||| |||| ||| || ||  |||||||||||||||||||||||||   ||||||||||||||||||||    
T  28877354 ggacaattttgttcaatttgaaagaggtataaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 28877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35426974 - 35426917
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaa 58  Q
    |||||||||||||||||| ||||||| || |||| ||||||||||||||||| |||||    
T  35426974 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggagtaaaa 35426917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 18805238 - 18805167
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||||||| ||| || |||||||||||||| | ||||||||    |||||||||||||||||||    
T  18805238 ttttgttcgatttaaaagaga-agaaccattttcgtgagcttgtcaaaatgcagggaccaaaagtgtaattaa 18805167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 28876993 - 28876910
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaa 156  Q
    |||||||| ||||||||||||||||||| ||| ||  || |  ||||||||||| || |||||||   ||||||||||||||||    
T  28876993 atagtttagggacgattttgttcgatttgaaagaggcagaattattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaa 28876910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 33742973 - 33742922
Alignment:
Q  112 gaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||| |||||||||| |||||||| |  |||||||||||||||||||||||    
T  33742973 gaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 33742922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 34541040 - 34541099
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||||||| |||||||||| || ||||| |  ||||||||||||||||||||||| |||||    
T  34541040 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaaa 34541099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 9178135 - 9178185
Alignment:
Q  118 tttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    |||||||||| || ||||| |  ||||||||||||||||||||||||||||    
T  9178135 tttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaaaa 9178185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 41681187 - 41681125
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaatat 172  Q
    ||||||| |||||||||| || ||||| |  ||||||||||||||||||||||| | ||||||    
T  41681187 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctataaatat 41681125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 44831300 - 44831247
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  44831300 aggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 44831247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 11656506 - 11656450
Alignment:
Q  112 gaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    ||||| |||||||||| || ||||| |  ||||||||||||||||||||||| ||||    
T  11656506 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaa 11656450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 11656950 - 11657002
Alignment:
Q  111 ggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  11656950 ggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11657002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 31133272 - 31133220
Alignment:
Q  111 ggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  31133272 ggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcc 31133220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35163859 - 35163815
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaataggga 45  Q
    |||||||||||||||||| |||||||||  |||| ||||||||||    
T  35163859 actaaaactgtcatttctgtgcgtttctcgagttggaaataggga 35163815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 41681604 - 41681680
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    ||||||||  ||| |||| | |||||||| |||||||| | || ||||| |  ||||||||||||||||||||||||    
T  41681604 ttttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggaccaaaagtgtaattaagcca 41681680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 7e-61; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 48247976 - 48248143
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||||| |||||||||||||       |||||||||||||||||||||||||||||||    
T  48247976 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagatgggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 48248075  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  48248076 aaaaaagataggaccatttttgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctaaaa 48248143  T

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Target: chr7; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 9181693 - 9181534
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  9181693 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaa-atatagtttaaggacgattttgttcgattt 9181595  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9181594 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 9181534  T

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Target: chr7; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 25637583 - 25637741
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| || ||||||| |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  25637583 actaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 25637681  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25637682 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 25637741  T

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Target: chr7; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 15712526 - 15712366
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||  |||| ||||||||||||||||||||||||| |        ||||||||||||||||||||||||||||||    
T  15712526 actaaaactgtcatttatgtgcgtttctagagttggaaatagggagataggactaaaactacaaaaaat-atatagtttaaggacgattttgttcgattt 15712428  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15712427 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 15712366  T

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Target: chr7; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 16081460 - 16081299
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| || |||| || |||| |||||||| ||||||||||||||||||       || ||||||||||||||||||||||||||||    
T  16081460 actaaaactgtcatttctgtgtgtttttggagttggaaataggtagataggactaaaactgcaaaaaa-caaatagtttaaggacgattttgttcgattt 16081362  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  16081361 aaaaaagataggaccatttccatgagttggtcaaaatagaaggaccaaaagtgtaattaagcc 16081299  T

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Target: chr7; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 786944 - 786782
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||||| |||| ||||||| || |||| |||||||||||||||||||||||||||       |||||||||||||||  ||||||||||||||    
T  786944 actaaaactgtcacttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggaaaattttgttcgattt 786845  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| || |||||||||||||||||||||||||| | |||| ||||||||||||||||||    
T  786844 aaaaaaggtatgaccattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaagcc 786782  T

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Target: chr7; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 26026703 - 26026861
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||  |||||||||||       ||||||||||||||| | |||||||||||||    
T  26026703 actaaaactgtcatttctatgcgtttttggagttggaaatagggagataaaactaaaactgcaaaaaa-catatagtttaaggatggttttgttcgattt 26026801  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    | ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  26026802 ataaaagataggaccattttcgtgaatttgtcaaaatagtaggaccaaaagtgtaattaa 26026861  T

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Target: chr7; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 28687750 - 28687587
Alignment:
Q  5 aaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaa 104  Q
    |||||||||||| | |||||||||| |||| |||||||| ||||||||||| ||||||        ||||||||||||||||||||||||||||||| ||    
T  28687750 aaactgtcatttatgtgcgtttctggagttggaaataggaagataggactagaactgcaaaaaaa-atatagtttaaggacgattttgttcgatttataa 28687652  T
Q  105 aagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||||||| |||||||||||||||||||||||||  || |||||||||||||||||||||||||||    
T  28687651 aagatagaaccattttcgtgagttggtcaaaatgatatgaccaaaagtgtaattaagccaaaaaa 28687587  T

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Target: chr7; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 5745800 - 5745642
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||  |||||||||||||| ||||||||||||       ||||||||||||| | |||||||||||||||    
T  5745800 actaaaactgtcatttatgtgcgtttctggagtaggaaatagggagataagactaaaactgcaaaaaa-catatagtttaagaaagattttgttcgattt 5745702  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  5745701 aaaaaagatatgaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 5745642  T

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Target: chr7; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 27245365 - 27245199
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||| |||||||| |||||||||| |||| |||||| ||||||||||||||||||||       ||||| ||||  |||||||||||||||||||    
T  27245365 actaaaactatcatttctgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaaacatatggtttggggacgattttgttcgattt 27245266  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaa 167  Q
    |||| || |||||||| ||||||||||||||||||||   |||||||||||||||||||||||||||    
T  27245265 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccaaaa 27245199  T

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Target: chr7; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 37 - 163
Target Start/End: Original strand, 7732908 - 7733033
Alignment:
Q  37 aaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaa 136  Q
    |||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7732908 aaatagggagataggactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagttggtcaaaa 7733006  T
Q  137 tagtaggaccaaaagtgtaattaagcc 163  Q
    | |||||||||||||||||||||||||    
T  7733007 tggtaggaccaaaagtgtaattaagcc 7733033  T

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Target: chr7; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 11971499 - 11971334
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn---catatagtttaaggacgattttgttcga 97  Q
    |||||||||||||||| | || ||||||  | || ||||||||||||||||||||||||||           ||||||||||||||||||||||||||||    
T  11971499 actaaaactgtcatttatgtgtgtttctagaattggaaatagggagataggactaaaactgtaaaaaaaaaacatatagtttaaggacgattttgttcga 11971400  T
Q  98 tttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||    
T  11971399 tttaaaaaagataggaccattttcgtgagtaggtcaaaatggtaggaccaaaagtataattaagcc 11971334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 26026479 - 26026320
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| ||||  ||||||||||||| ||||||||||||       ||||||||||| |||||||||||||||||||    
T  26026479 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataagactaaaactgcaaaaaaacatatagtttatggacgattttgttcgattt 26026380  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||| || || ||||| ||||||||| |||||||||||  ||||||||||||||||||||    
T  26026379 aaaagaggtatgaccaatttcgtgagctggtcaaaatacaaggaccaaaagtgtaattaa 26026320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 27245589 - 27245748
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||| | |||||| |||||||||| |||| |||||||||||||| |||||||| |||       |||||| ||||||||||||||||||||||||    
T  27245589 actaaaactatgatttctgtgcgtttctggagttggaaatagggagatatgactaaaattgcaaaata-catataatttaaggacgattttgttcgattt 27245687  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||    
T  27245688 aaaaaagataggaccattttcgtgagttgatcaaaatggtaagaccaaaagtataattaag 27245748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 14311672 - 14311830
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||| |||||||||| |||||||||  |||| |||||||||||||| ||||||||||||       |||||||||||| ||||||||||||||||||    
T  14311672 actaaaattgtcatttctgtgcgtttctagagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaagacgattttgttcgattt 14311770  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||||||||||||| |||||||||||||| | ||| ||| ||||||||||||||    
T  14311771 aaaaaagataggaccatttttgtgagttggtcaaattggtacgacaaaaagtgtaattaa 14311830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 25637357 - 25637197
Alignment:
Q  3 taaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaa 102  Q
    |||||||||||||| | |||||||||| |||| ||||||||||||||||||||||||| |       ||||||||||| |||||||||||||||||||||    
T  25637357 taaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactacaaaaaaacatatagtttagggacgattttgttcgatttaa 25637258  T
Q  103 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    || || |||||||| |||| |||||||||||| ||   |||||||||||||||||||||||    
T  25637257 aagaggtaggaccaatttcatgagttggtcaatatgcaaggaccaaaagtgtaattaagcc 25637197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 7732649 - 7732482
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||||||| || ||||  ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  7732649 actaaaactgtcatttatgtgcgtttatggagttgaaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 7732551  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||| || |||||||| |||||||||||| |||||||   |||||||||| |||||||||||| |||||    
T  7732550 aaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaagcctaaaaa 7732482  T

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Target: chr7; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 16917806 - 16917708
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  16917806 catatagtttaaggaggattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctaaaa 16917708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 2758083 - 2758244
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| |||||||||||| |||||||||||||| |||| ||||||| ||||       ||||||||||| |||||||||||||||||||    
T  2758083 actaaaactgtcatttatatgcgtttctggagttagaaatagggggatatgactaaacctgcaaaaaa-catatagtttatggacgattttgttcgattt 2758181  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || ||| |||||||||||||||||  ||||||   |||||||||||||||||||||||    
T  2758182 aaaagaggtagaaccattttcgtgagttgaacaaaatgcgaggaccaaaagtgtaattaagcc 2758244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 16081684 - 16081845
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||||||| || |||| |||||||||||||||||||||||||||       ||||||||||| ||| |||||||||||||||    
T  16081684 actaaaactgtcatttttgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggatgattttgttcgattt 16081782  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || ||||| || ||||||||||||||||||||   ||||||||| |||||||||||||    
T  16081783 aaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaggtgtaattaagcc 16081845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 39388651 - 39388813
Alignment:
Q  1 actaaaactgtcatttcta-tgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||| |  ||||||| || ||||  ||||||||||||||||||||||||||       |||||||||||  |||||||||||||||||    
T  39388651 actaaaactgtcattttttgtgcgtttttggagttgaaaatagggagataggactaaaactgcaaaaaaacatatagtttagagacgattttgttcgatt 39388750  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    ||||| || |||||| | ||||||||||||||||||||   ||||||||||||||||||||||    
T  39388751 taaaagaggtaggacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 39388813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 24929688 - 24929858
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatata----gtttaaggacgattttgttcg 96  Q
    |||||||||||||||||| ||||||| || |||| |||||||||||||||||||||||||||        |||||    ||||| ||||||||||||| |    
T  24929688 actaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaaaatatatatagtttagggacgattttgtttg 24929787  T
Q  97 atttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaa 167  Q
    |||||||| || || ||||| ||||||||||||||||||||   |||||||||| ||||||||||||||||    
T  24929788 atttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagccaaaa 24929858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 35161189 - 35161342
Alignment:
Q  4 aaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaa 103  Q
    |||||| |||||| | ||||||| || |||| |||||||||||||| ||||||||||||       ||||||||||| ||||||||||||||||||||||    
T  35161189 aaaactatcatttatgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaaa 35161288  T
Q  104 aaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaat 157  Q
    | || |||||||| || |||||||||||||||||   |||||||||||||||||    
T  35161289 agaggtaggaccaattccgtgagttggtcaaaatgcaaggaccaaaagtgtaat 35161342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 26048332 - 26048498
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||| ||| || |||| |||||||||||||| ||||||||||||       |||||||||||||||| |||||||| |||||    
T  26048332 actaaaactgtcatttatgtgcatttttggagttggaaatagggagatatgactaaaactgcaaaaa--catatagtttaaggacaattttgtttgattt 26048429  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||| || |||||||| |||||||||||||||||||    |||| ||||||||||||||||||| ||||    
T  26048430 aaaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggaacaaaagtgtaattaagccataaaa 26048498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 28687884 - 28688041
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||| |||||||||||||| |||       ||||||||||| |||||||||||||||||||    
T  28687884 actaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaagtgcaaaaaa-catatagtttagggacgattttgttcgattt 28687982  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||| || || || || ||||||||||||||||||||   |||||||||| |||||||||    
T  28687983 aaaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaa-tgtaattaa 28688041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 9181794 - 9181958
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn--catatagtttaaggacgattttgttcgat 98  Q
    |||||||||||||||| | |||||||||| |||| ||||||||||||||||||||||||||          ||||||||||| |||||||||||||||||    
T  9181794 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaaaaacatatagtttagggacgattttgttcgat 9181893  T
Q  99 ttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| || || || || |||||||| |||||||||||   |||| ||||||||||||||||||    
T  9181894 ttaaaagaggtatgatcaatttcgtgaattggtcaaaatgcaaggatcaaaagtgtaattaagcc 9181958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 48247752 - 48247587
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnnca---tatagtttaaggacgattttgttcga 97  Q
    |||||||||||||||||| ||||||| || |||| |||||||||||||| ||||||||||||        |   |||| |||| ||||||||||||| ||    
T  48247752 actaaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaaaaatatatactttagggacgattttgtttga 48247653  T
Q  98 tttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| || |||||||| |||||||||||| |||||||   |||||||||||||||||||||||    
T  48247652 tttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagcc 48247587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 34595157 - 34595318
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncat-atagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||||| |||||||||| ||||  ||||| || | ||| |||||||||||       ||| |||||||| ||||||||||||||||||    
T  34595157 actaaaactgtcatttctgtgcgtttctggagttgaaaataagggggtagcactaaaactgcaaaaa--catgatagtttagggacgattttgttcgatt 34595254  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||| |   ||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  34595255 taaaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 34595318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 787242 - 787329
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||  || |||||||||||||||||    
T  787242 atagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaa 787329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 5334273 - 5334363
Alignment:
Q  71 atatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||||||| ||||||||||||||||||||||| || |||||| ||||||||||||||||||||||   |||||||||||||||||||||    
T  5334273 atatagtttagggacgattttgttcgatttaaaagaggtaggactattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 5334363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 26048109 - 26047960
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagatagg-actaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||||| |||||||||| |||| |||||||||| ||||| |  ||||           |||||||||||||||| ||||| |||||||    
T  26048109 actaaaactgtcatttctgtgcgtttctggagttggaaatagggacataggcaacaaaa-----------catatagtttaaggacaattttattcgatt 26048021  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||||| ||||||||||||||||||||| |||| |||| | |||||||||||||||    
T  26048020 taaaaaagatatgaccattttcgtgagttggtcgaaatggtagaatcaaaagtgtaattaa 26047960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 5333973 - 5333880
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||| ||||||||||||||||||||||| || || ||||||||||||||||||||||||||   |||| ||||||||||||||||||    
T  5333973 catatagtttagggacgattttgttcgatttaaaagaggtacgaccattttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcc 5333880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 9394117 - 9394274
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattta 101  Q
    ||||||||||||||||| || |||| || |||| |||||||| ||||||||||||||||||        |||||||||| ||||| |||||||||||||     
T  9394117 ctaaaactgtcatttctttgtgtttttgaagttggaaatagg-agataggactaaaactgcaaaaaat-atatagtttagggacggttttgttcgatttg 9394214  T
Q  102 aaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    |||||| |||||||||||| ||||| |||||||||| |   ||||||||||||||||||||    
T  9394215 aaaaaggtaggaccatttttgtgagctggtcaaaat-gcgagaccaaaagtgtaattaagc 9394274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 11973787 - 11973945
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||| |||||| |||||||||||       ||| || |||| |||||||||||||| ||||    
T  11973787 actaaaactgtcatttctgtgcgtttctgaagttggaaataggaagatagaactaaaactgc-aaaaaccatttaatttagggacgattttgttcaattt 11973885  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||| || ||| |||| ||||||  ||||||||||||   |||||||||| |||||||||    
T  11973886 aaaagaggtagaaccaatttcgtacgttggtcaaaatgcaaggaccaaaaatgtaattaa 11973945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 5746024 - 5746186
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn-catatagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||| | ||||||| || |||| |||||||||||||| |||||||| |||        ||||||||||| ||||| ||||||||||||    
T  5746024 actaaaactgtcatttatgtgcgtttatggagttggaaatagggagataagactaaaattgcaaaaaaaacatatagtttatggacggttttgttcgatt 5746123  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||| ||  || | || ||||||||||| ||||||||   |||||||||||||||||||||||    
T  5746124 taaaagaggcag-atcaatttcgtgagttagtcaaaatgcaaggaccaaaagtgtaattaagcc 5746186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 163
Target Start/End: Original strand, 39136991 - 39137079
Alignment:
Q  75 agtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| ||||||||||||||||||||||| ||  |||||||||||||||||  ||||||||||  |||| ||||||||||||||||||    
T  39136991 agtttatggacgattttgttcgatttaaaagaggcaggaccattttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaagcc 39137079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 35160746 - 35160660
Alignment:
Q  72 tatagtttaaggacgattttgttcgatttaaaaaaga--taggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaa 156  Q
    |||| |||||| ||||||| ||||||||||||||| |  || |||||||||||||||||||||||||| ||||||||||||||||||    
T  35160746 tataatttaagaacgatttagttcgatttaaaaaaaaaatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaa 35160660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 39136776 - 39136681
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    |||||||| ||||||||||||||||||| ||| ||  || |||||||||||||| ||||||||||   |||| |||||||||||||||||| ||||    
T  39136776 atagtttagggacgattttgttcgatttgaaagagtcagaaccattttcgtgagctggtcaaaatgcaaggatcaaaagtgtaattaagcctaaaa 39136681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 4477860 - 4477700
Alignment:
Q  4 aaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncat-atagtttaaggacgattttgttcgatttaa 102  Q
    ||||||||||||||  |||||||||| |||| ||||   |||| |||||||||||||||       ||| |||||||| |||||||||| ||| ||||||    
T  4477860 aaaactgtcatttccctgcgtttctggagtttgaaaataggaggtaggactaaaactgcaaaaa--catgatagtttagggacgattttattcaatttaa 4477763  T
Q  103 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    || ||   ||||||||||||||| |||||||||||   |||| ||| ||||||||||||||||    
T  4477762 aagaggcgggaccattttcgtgaattggtcaaaatgtaaggatcaatagtgtaattaagccaa 4477700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 49064124 - 49064034
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||| ||| |||||||||| |||| ||| ||  |  |||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  49064124 atagtttatggaagattttgttctatttgaaagaggcaataccattttcgtgagctggtcaaaatacgaggaccaaaagtgtaattaagcc 49064034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 14311477 - 14311341
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | || |||| || |||| ||||||||||||||||| ||||||||        ||||||||||| |||||||||| ||| ||||    
T  14311477 actaaaactgtcatttatgtgtgtttatggagttggaaatagggagataggattaaaactgtaaaaaaacatatagtttagggacgattttattcaattt 14311378  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaat 137  Q
    |||| || ||  |||| |||  ||||||||| |||||    
T  14311377 aaaagaggtataaccaattttatgagttggttaaaat 14311341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 40669689 - 40669759
Alignment:
Q  98 tttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    |||||||||  || || ||||||||||||||||||||||| | |||| ||||||||||||||| |||||||    
T  40669689 tttaaaaaaagtatgatcattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaaaccaaaaa 40669759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 35288986 - 35288891
Alignment:
Q  80 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaa-aaatatta 174  Q
    |||||| |||||||||  ||| |||| |  ||||||| |||||||||| || |||||||  | |||||||||||||||||||||||| ||||||||    
T  35288986 aaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaattaagccaaataaatatta 35288891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 45815431 - 45815344
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||| ||||| ||||||||||||| ||| ||  | ||||||||||   || ||||||||||   |||||||||||||||||||||||    
T  45815431 atagtttagggacggttttgttcgatttgaaagaggcatgaccattttc---agctggtcaaaatgcaaggaccaaaagtgtaattaagcc 45815344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 2658922 - 2658839
Alignment:
Q  80 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| ||||||||| |||| |||| |  ||||||| |||||||||| || ||||| |  ||||| |||||||||||||||||    
T  2658922 aaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagcc 2658839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 5184482 - 5184431
Alignment:
Q  109 taggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||| ||||||||||||||||||||   |||||||||| |||||||||    
T  5184482 taggaccaatttcgtgagttggtcaaaatccaaggaccaaaaatgtaattaa 5184431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 18535338 - 18535419
Alignment:
Q  72 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgt 154  Q
    ||||||||| ||||| ||||||||||||| ||| || || |||||||||| ||||   |||||||||  ||||||||||||||    
T  18535338 tatagtttagggacggttttgttcgatttgaaagaggta-gaccattttcttgagcatgtcaaaatacgaggaccaaaagtgt 18535419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 38859133 - 38859191
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    ||||||| |||||||||| || ||||| |  ||||||||||||||||||||||| ||||    
T  38859133 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaa 38859191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 49064176 - 49064266
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||  |||||||||||||||||| ||| ||  | ||||||||||||||  ||| ||||||   |||| ||||||| ||||||||||    
T  49064176 atagtttattgacgattttgttcgatttgaaagagtcatgaccattttcgtgaactggccaaaatgtgaggatcaaaagtataattaagcc 49064266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 19590578 - 19590525
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  19590578 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 173
Target Start/End: Complemental strand, 33880706 - 33880609
Alignment:
Q  77 tttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa-gccaaaaaatatt 173  Q
    |||| ||||| ||||||||||||| ||| ||  || || ||||| ||||| |||||||||||  |||||||||| || |||||| || ||||||||||    
T  33880706 tttagggacggttttgttcgatttgaaagaggcagaacaatttttgtgagctggtcaaaatacgaggaccaaaaatgcaattaaggctaaaaaatatt 33880609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33880970 - 33881030
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgc 62  Q
    |||||||||||||||| | |||||||||| ||||  |||||||| |||| ||||||||||||    
T  33880970 actaaaactgtcatttatgtgcgtttctggagttgaaaataggg-gataagactaaaactgc 33881030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 34594630 - 34594585
Alignment:
Q  116 attttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||| ||||||||   |||||||||||||||||||||    
T  34594630 attttcgtgagttagtcaaaatgcgaggaccaaaagtgtaattaag 34594585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 35578979 - 35578902
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||| ||||||||||||| |||  |  ||||||||||| ||||| ||||||||||   | ||||||||||||||||||    
T  35578979 gacggttttgttcgatttgaaagtggcaggaccatttttgtgagctggtcaaaatgcaatgaccaaaagtgtaattaa 35578902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 9393818 - 9393738
Alignment:
Q  81 aggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||| ||||||||||||| ||| ||  | ||| ||||||||||| || |||||||   |||| ||||||||||||||||    
T  9393818 aggacggttttgttcgatttgaaagaggcaagacaattttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaag 9393738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 11539799 - 11539637
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  11539799 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 11539700  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11539699 aaaaaaaataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 11539637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 33920996 - 33921158
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||  |||| |||||||||||||||||||||||||||       ||| |||||||| ||||||||||||||||||    
T  33920996 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaaacatttagtttaaagacgattttgttcgattt 33921095  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33921096 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 33921158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 43160397 - 43160557
Alignment:
Q  3 taaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaa 102  Q
    |||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||    
T  43160397 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgatttagttcgatttaa 43160496  T
Q  103 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||    
T  43160497 aaaagataggaccattttcgtgagtttgtcaaaatggtaggacctaaagtgtaattaagcc 43160557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 20127898 - 20127736
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||| |||||||| | ||||||||||  ||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  20127898 actaaaattgtcatttttgtgcgtttctggggttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 20127799  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  20127798 aaaaaagataggaccattttcgtgaattggtcaaaatggtaggaccaaaagtgtaattaagcc 20127736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 38008336 - 38008497
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||| |||||| | ||||||| || |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  38008336 actaaaactatcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 38008434  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38008435 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 38008497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 6949613 - 6949451
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| ||||||| || |||| |||||||||||||||||||||||||||       ||||||||| |||||||||||||||||||||    
T  6949613 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagttaaaggacgattttgttcgattt 6949514  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||    
T  6949513 aaaaaagataggaccattttcgtgagttagtcaaaatgataggaccaaaaatgtaattaagcc 6949451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 42192401 - 42192235
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||       ||||||||||| |||||||||||||||||||    
T  42192401 actaaaactgtcatttatgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 42192303  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    |||| || |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  42192302 aaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagccaaaaa 42192235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 63118 - 62951
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||  |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  63118 actaaaactgtcatttatgtgcgtttcttgagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 63020  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
     |||||| ||||||||||||||||||||||||||||| | ||||||| ||||||||||||||| |||||    
T  63019 taaaaaggtaggaccattttcgtgagttggtcaaaatggaaggaccataagtgtaattaagcctaaaaa 62951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 4356141 - 4356302
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||||| |||| | |||||||||       |||||||||||||||||||||||||||||||    
T  4356141 actaaaactgtcatttctgtgcgtttctggagttggaaatagggaaatagaattaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 4356239  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  4356240 aaaaaagatatgaccattatcgtgagttggtcaaaatgataggaccaaaagtgtaattaagcc 4356302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 4809264 - 4809425
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||| ||| ||||||| |||||||||||||||||||||||||||       |||||||||||||||||| ||||||| ||||    
T  4809264 actaaaactgtcatttttgtgcttttttgtagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgactttgttcaattt 4809362  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  4809363 aaaaaacataggaccattttcgtgagttagtcaaaatggtaggaccaaaagtgtaattaagcc 4809425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 16953098 - 16952935
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn-catatagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||||| |||||||||  |||| |||||||||||||| ||||||||| ||        ||||||||||||||||||||||||||||||    
T  16953098 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgcaaaaaaaacatatagtttaaggacgattttgttcgatt 16952999  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||||||| ||||||||||    
T  16952998 taaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagcc 16952935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 17061069 - 17060906
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn-catatagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||||| |||||||||  |||| |||||||||||||| ||||||||| ||        ||||||||||||||||||||||||||||||    
T  17061069 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgcaaaaaaaacatatagtttaaggacgattttgttcgatt 17060970  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||||||| ||||||||||    
T  17060969 taaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagcc 17060906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 38008110 - 38007944
Alignment:
Q  3 taaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaa 102  Q
    |||||||||||||||| ||||||| || |||| |||||||||||||| ||||||||||||       ||||||||||| |||||||||||||||||||||    
T  38008110 taaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaa 38008011  T
Q  103 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    || || |||||||| ||||||||||||||||||||   ||||||||||||||||||||||| |||||    
T  38008010 aagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctaaaaa 38007944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 42192627 - 42192789
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| ||||||||| |||| ||||||||||||       ||| ||||||| |||||||||||||||||||    
T  42192627 actaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaaacatctagtttagggacgattttgttcgattt 42192726  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  42192727 aaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcc 42192789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 13315658 - 13315496
Alignment:
Q  1 actaaaactgtcatttctatgcgttt-ctgtagttagaaatagggagataggactaaaactgcnnnnnnn--catatagtttaaggacgattttgttcga 97  Q
    |||||||||||||||||| ||| ||| ||| |||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||    
T  13315658 actaaaactgtcatttctgtgcattttctggagttggaaatagggagataggactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcga 13315559  T
Q  98 tttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  13315558 tttaaaaaagatatgaccattttcatgagttggtcaaaatggtaggacaaaaagtgtaattaa 13315496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 16175734 - 16175892
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  16175734 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 16175833  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaatta 159  Q
    |||| || || ||||| |||||||||||||| |||||   |||||||||||||||||||    
T  16175834 aaaagaggtatgaccaatttcgtgagttggtaaaaatgtaaggaccaaaagtgtaatta 16175892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 44219805 - 44219644
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||       |||||| ||||||||| ||||||||||||||    
T  44219805 actaaaactgtcatttctgtgcgtttctggagttggaaacagggagataggactaaaactgcaaaaaa-catataatttaaggacaattttgttcgattt 44219707  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| ||||| |||||| |||||||| ||||||| | |||||||||||||||||||||||    
T  44219706 aaaaaaggtaggatcatttttgtgagttgatcaaaatggaaggaccaaaagtgtaattaagcc 44219644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 15551059 - 15551218
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||| | |||| | |||||||||| |||| |||||||||||||||||||||||||||       ||||||  |||||||||||||||||||||||    
T  15551059 actaaaactattatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatataacttaaggacgattttgttcgattt 15551158  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||| ||| ||||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  15551159 aaaaaatatatgaccatttttgtgagttggtcaaaatggtagggccaaaagtgtaattaa 15551218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 20128122 - 20128289
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| ||||||||||||||||||||||| |||       ||||||||||||||||||||||||| |||||    
T  20128122 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaa-catatagtttaaggacgattttgtttgattt 20128220  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||| || |||||||| |||||||||||||| |||||   ||||||||||||||||||||||| |||||    
T  20128221 aaaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaagcctaaaaa 20128289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 11540023 - 11540184
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||||| ||| ||||||||||||       ||||||||||| |||||||||||||||||||    
T  11540023 actaaaactgtcatttctgtgcgtttctggagttggaaatagggatatatgactaaaactgcaaaaaa-catatagtttatggacgattttgttcgattt 11540121  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||||||||||||||||||||||||   | |||||||||| ||||||||||    
T  11540122 aaaagaggtaggaccattttcgtgagttggtcaaaatgcgatgaccaaaagtataattaagcc 11540184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 4355916 - 4355753
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| ||||  ||||||||||||||||||||||||||       ||||||||||| |||||||||||||||||||    
T  4355916 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 4355818  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    |||| || || ||||| |||||||||| |||||||||   |||||||||||||||||||||||||    
T  4355817 aaaagaggtatgaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaagccaa 4355753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 15550835 - 15550676
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| ||||  ||||||||| ||||||||||||||||       ||||||||||| |||||||||||||||||||    
T  15550835 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggaaataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 15550736  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||| || |||||||| |||||||||||||||| |||   |||| |||||||||||||||    
T  15550735 aaaagaggtaggaccaatttcgtgagttggtcagaatgcaaggatcaaaagtgtaattaa 15550676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 33920773 - 33920615
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||       ||||||||||| |||||||||||||||||||    
T  33920773 actaaaactgtcatttctatgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaat-catatagtttagggacgattttgttcgattt 33920675  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||| || || || || ||||||||||||||||||||   |||||||||| |||||||||    
T  33920674 aaaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 33920615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 5560143 - 5560051
Alignment:
Q  71 atatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5560143 atatagtttaaggacgattttgttcaatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 5560051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 13399807 - 13399965
Alignment:
Q  3 taaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaa 102  Q
    |||||||||||||||||||||||| || |||| |||||||||||||| ||||||||||||        ||||||||||||||| ||||||||||||||||    
T  13399807 taaaactgtcatttctatgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaat-atatagtttaaggacaattttgttcgatttaa 13399905  T
Q  103 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    || | |||| ||||||||||||||||||||||||| ||||||| |||| || |||||||||    
T  13399906 aagaaatag-accattttcgtgagttggtcaaaatggtaggactaaaattgcaattaagcc 13399965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 9330179 - 9330338
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||||||||||||| |||||| |||||  ||||||| ||||||||||||||||||       ||||||||||  |||||||||||||||||||    
T  9330179 actaaaactgtcatttctatgtgtttctatagttgaaaataggtagataggactaaaactgcaaaaaaacatatagtttggggacgattttgttcgattt 9330278  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||| || || ||| | ||||||||||||||||||||   ||||||||||||||||||||    
T  9330279 aaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 9330338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 24140064 - 24140220
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||| |||||||||| |||||||||| |||| |||||||||| |||| |||||||||||        |||||||||| ||||||||||||| |||||    
T  24140064 actaaaaatgtcatttctgtgcgtttctggagttggaaatagggatatagaactaaaactgcaa------atatagtttatggacgattttgtttgattt 24140157  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||||||||||||||||||| ||   |||| ||||||||||||||||||    
T  24140158 aaaaaaggtaggaccattttcgtgagttggtcaagatgcgaggaacaaaagtgtaattaagcc 24140220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16953319 - 16953479
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| ||||||| || |||| |||||||||||||||||||||||||||       |||||| |||| ||||  |||||||||||||    
T  16953319 actaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaa-catatactttagggacatttttgttcgattt 16953417  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    |||| || |||||||| |||| |||||||||||||||   ||||||||||||||||||||||    
T  16953418 aaaagaggtaggaccaatttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 16953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 43216094 - 43216255
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||| |||||||||| ||| |||||| |||| ||||||| |||||||||||||||||||        |||||||||| |||||||||||||||||||    
T  43216094 actaaaattgtcatttctgtgcatttctggagttggaaatagagagataggactaaaactgcaaaaaat-atatagtttagggacgattttgttcgattt 43216192  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||| |||||||||||||||||||    ||||| |||||||||||||||||    
T  43216193 aaaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggactaaaagtgtaattaagcc 43216255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 4809040 - 4808905
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||| |||||||||||||||| |       ||||||||||| |||||||||||||||||||    
T  4809040 actaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactacaaaaaa-catatagtttatggacgattttgttcgattt 4808942  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaat 137  Q
    |||| || ||||| || ||||||||||||||||||||    
T  4808941 aaaagaggtaggatcaatttcgtgagttggtcaaaat 4808905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 43160171 - 43160012
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| ||||  ||||||||||||||||||||||||||         ||||||||| |||||||||||||||||||    
T  43160171 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaaatgtatagtttagggacgattttgttcgattt 43160072  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||| || || ||||| |||||||||||| |||||||   |||||||||| |||||||||    
T  43160071 aaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaa 43160012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 649687 - 649527
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||| ||||||| | |||||||||| |||| |||||||||||| || |||||||||||       ||||||||||| |||||||||||||||||||    
T  649687 actaaaac-gtcatttatgtgcgtttctggagttggaaatagggagacagaactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 649590  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||| |||||| |||||||||| ||   |||||||||||||||||||||||    
T  649589 aaaagaggtaggaccaatttcgtaagttggtcaagatgcaaggaccaaaagtgtaattaagcc 649527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 649801 - 649881
Alignment:
Q  81 aggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  649801 aggacgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaag 649881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 63343 - 63507
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn-----catatagtttaaggacgattttgttc 95  Q
    |||||||||||||||| | |||||||||  |||| |||||||| ||||||||||||||||||            ||||||||||| |||||||||||||     
T  63343 actaaaactgtcatttatgtgcgtttctagagttggaaataggaagataggactaaaactgcaaaaaaaaaaaacatatagtttagggacgattttgttt 63442  T
Q  96 gatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||| ||||| |||||||||||||||||||||||||||  |||||||||| | |||||||    
T  63443 gatttaaaagagataagaccattttcgtgagttggtcaaaatacaaggaccaaaaatataattaa 63507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 32418318 - 32418159
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||| |||||||||| |||||||||| |||| |||||| ||||||| ||||||||||||        |||||||||| ||||||||||||||||||     
T  32418318 actaaaaatgtcatttctgtgcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaat-atatagtttagggacgattttgttcgatt- 32418221  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
     ||| || |||||||| ||||||||||||||||||||   ||||||| |||||||||||||||    
T  32418220 -aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccataagtgtaattaagcc 32418159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13399583 - 13399454
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||       ||||||||||| |||||||||||||| ||||    
T  13399583 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggacgattttgttccattt 13399485  T
Q  101 aaaaaagataggaccattttcgtgagttggt 131  Q
    |||| || || ||||| |||||||| |||||    
T  13399484 aaaagaggtatgaccaatttcgtgaattggt 13399454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 6949850 - 6949994
Alignment:
Q  24 tttctgtagttagaaatagggagataggactaaaactgcnnnnnnnca-tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcg 122  Q
    |||||| |||| |||||| ||||||||||||||||||||        | ||||||||| |||||||||||||| |||||||| |  |||||||| |||||    
T  6949850 tttctggagtttgaaatatggagataggactaaaactgcaaaaaaaaaatatagtttagggacgattttgttctatttaaaagatgtaggaccaatttcg 6949949  T
Q  123 tgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaa 167  Q
    |||||||||||||||   |||||||||||||||||||||||||||    
T  6949950 tgagttggtcaaaatgcaaggaccaaaagtgtaattaagccaaaa 6949994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 171
Target Start/End: Original strand, 32418550 - 32418700
Alignment:
Q  20 tgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattt 119  Q
    |||||||||  |||| |||||||||||||| || |||||||||        |||||||||||||||||||||||||||||||||| || ||| | || ||    
T  32418550 tgcgtttctagagttggaaatagggagataagattaaaactgcaaaaaat-atatagtttaaggacgattttgttcgatttaaaagaggtagaatcaatt 32418648  T
Q  120 tcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaata 171  Q
    |||||| |||||||||||  ||||||||||||| |||||||||| |||||||    
T  32418649 tcgtgaattggtcaaaatgataggaccaaaagtataattaagcctaaaaata 32418700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 44220098 - 44220191
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||   ||||| |||||||||||||||||    
T  44220098 catatagtttagggacgattttgtttgatttaaaaaaggtatgaccattttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaagcc 44220191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 31797166 - 31797323
Alignment:
Q  4 aaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaa 103  Q
    ||||||||||||||| |||||||||  ||||  ||||||| || |||||||||||||||       ||||||||||| ||||| ||||||||||||| ||    
T  31797166 aaaactgtcatttctctgcgtttctagagttgaaaatagg-aggtaggactaaaactgcaaaaaa-catatagtttagggacggttttgttcgatttgaa 31797263  T
Q  104 aaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    | ||  | ||||||||||||||| ||||||||||   |||||||||||||||||||||||    
T  31797264 agaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaagcc 31797323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 25336054 - 25336146
Alignment:
Q  71 atatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||| |||| ||||||||||||||||||||||| |  |||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  25336054 atataatttagggacgattttgttcgatttaaaagaagtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 25336146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 28143416 - 28143575
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncat-atagtttaaggacgattttgttcgattt 100  Q
    ||||||||||||||||| |||||||||| ||||  |||||||  | |||||||||||||||       ||| |||||||| |||||||||||||||||||    
T  28143416 ctaaaactgtcatttctctgcgtttctggagttgaaaataggacg-taggactaaaactgcaaaaa--catgatagtttagggacgattttgttcgattt 28143512  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
     ||| ||  ||||||||||||||||| ||||||||||   ||||||||||||| |||||||||    
T  28143513 gaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagcc 28143575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 9329974 - 9329915
Alignment:
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  9329974 aaaaaagataggaccatttttgtgagttggtcaaaattgtaggaccaaaagtgtaattaa 9329915  T

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Target: chr2; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5560935 - 5560996
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgc 62  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  5560935 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgc 5560996  T

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Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 14942306 - 14942392
Alignment:
Q  77 tttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| |||| |||||||||||||| ||| ||| | ||||||||||||||| ||||||||||   | |||||||||||||||||||||    
T  14942306 tttatggacaattttgttcgatttgaaagagacaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaagcc 14942392  T

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Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 20495283 - 20495196
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||| ||||||||||||| ||||||||| ||  | || |||||||||||||||||||||||   || |||||||||| ||||||    
T  20495283 atagtttagggacgattttgttagatttaaaagaggcatgatcattttcgtgagttggtcaaaatgcgagaaccaaaagtgaaattaa 20495196  T

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Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 5035953 - 5035903
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgt 123  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||||||||||    
T  5035953 atagtttagggacggttttgttcgatttaaaaaagacaggaccattttcgt 5035903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 35779791 - 35779706
Alignment:
Q  80 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    |||||| |||||||||  ||| |||| |  ||||||||||||||||||  ||||||| |  |||||||||||||||||||||||||    
T  35779791 aaggacaattttgttctgttttaaaatggcaggaccattttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagccaa 35779706  T

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Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43215870 - 43215809
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgc 62  Q
    |||||||||||||||||||| ||||| || ||||  ||||||||||||| ||||||||||||    
T  43215870 actaaaactgtcatttctattcgtttttggagttgaaaatagggagatatgactaaaactgc 43215809  T

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Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 2190536 - 2190612
Alignment:
Q  77 tttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtg 153  Q
    |||| ||||||||||||||||||| ||||||  ||||||| ||||||||| ||||||||||   | |||||||||||    
T  2190536 tttagggacgattttgttcgatttgaaaaaggcaggaccaatttcgtgagctggtcaaaatgcgatgaccaaaagtg 2190612  T

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Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 20440523 - 20440581
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    ||||||| ||||||||||||| ||||| |  ||||||||||||||||||||||| ||||    
T  20440523 aggaccagtttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcctaaaa 20440581  T

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Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 9330038 - 9329985
Alignment:
Q  5 aaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaa 58  Q
    |||||||||||||| |||||||||  |||| |||||| ||||||||||||||||    
T  9330038 aaactgtcatttctgtgcgtttctagagttggaaataaggagataggactaaaa 9329985  T

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Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 20444802 - 20444749
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| ||||||||||||| ||||| |  |||||||||||||||||||||||    
T  20444802 aggaccagtttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcc 20444749  T

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Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22445801 - 22445741
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactg 61  Q
    |||||||||||||||| | || ||||||| ||||  |||||||||||||| ||||||||||    
T  22445801 actaaaactgtcatttatgtgtgtttctgaagttgaaaatagggagatagtactaaaactg 22445741  T

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Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 28616664 - 28616608
Alignment:
Q  112 gaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    ||||| |||||||||| || ||||| |  ||||||||||||||||||||||||||||    
T  28616664 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaaaa 28616608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 9329892 - 9329833
Alignment:
Q  102 aaaaagataggaccattttcgtgagttgg-tcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||  |||||||||||||||| | |||||||  |||||||||||||||||||||    
T  9329892 aaaaagatataaccattttcgtgagttagatcaaaatgataggaccaaaagtgtaattaa 9329833  T

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Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 28617076 - 28617159
Alignment:
Q  80 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| |||||||||  ||| |||| || || |||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  28617076 aaggaccattttgttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 28617159  T

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Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 26538571 - 26538629
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    ||||||| |||||||||| || ||||| |  ||||||||||||||||||||||| ||||    
T  26538571 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaa 26538629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 1978601 - 1978654
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  1978601 aggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcc 1978654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 18451293 - 18451382
Alignment:
Q  80 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||||| |||||||||  ||| |||| |  ||||||| |||||| ||| || ||||| |  ||||||||||||||||||||||| |||||    
T  18451293 aaggactattttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaaa 18451382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 3824179 - 3824251
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||||||||||| |  | ||||| |||||||||||||| |||||   | |||||||||| |||||||    
T  3824179 ttttgttcgatttaaaaagggcatgaccaatttcgtgagttggttaaaatgcgatgaccaaaagtataattaa 3824251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 8425430 - 8425358
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||  ||| |||||| || ||||| |||||||||| || ||||| |  ||||||||||||||||||||    
T  8425430 ttttgttctgttttaaaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 18450882 - 18450830
Alignment:
Q  111 ggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  18450882 ggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 18450830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 18450991 - 18450935
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaa 58  Q
    ||||||||||||||||| |||||||||| |||| ||||   |||| |||||||||||    
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaa 18450935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 169
Target Start/End: Complemental strand, 22445724 - 22445633
Alignment:
Q  77 tttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||||||||| ||||||||||||||| || | || ||||| |||  | ||||| ||||||| | | |||||||||||||||||| || |||||    
T  22445724 tttaaggacggttttgttcgatttaataatggtatgaccaattttataagttgatcaaaat-gcaagaccaaaagtgtaattaaacctaaaaa 22445633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 43058408 - 43058332
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    ||||||||  ||| ||||||  ||||||| ||| ||||||||| ||||| |  |||| |||||||||||||||||||    
T  43058408 ttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagcca 43058332  T

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Target: chr5 (Bit Score: 117; Significance: 1e-59; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 28290029 - 28290190
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  28290029 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 28290127  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28290128 aaaaatgataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 28290190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 19291518 - 19291351
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| ||||||| || |||| |||||| ||||||| ||||||||||||       |||||||||||||||||||||||||||||||    
T  19291518 actaaaactgtcatttctgtgcgtttatggagttggaaataaggagataagactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 19291419  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  19291418 aaaaaagataggaccatttttgtgagttgttcaaaatagtaggaccaaaagtgtaattaagccaaaaa 19291351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 8419008 - 8419165
Alignment:
Q  3 taaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaa 102  Q
    ||||| |||||||||| |||||||||| |||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||| ||||||    
T  8419008 taaaattgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa--atatagtttaaggacgattttgttcaatttaa 8419105  T
Q  103 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  8419106 aaaagataggaccatattcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 8419165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 15029694 - 15029855
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| ||||||||||||| | |||||||||||       |||||||||||||||||||||||||||||||    
T  15029694 actaaaactgtcatttatgtgcgtttctggagtttgaaatagggagatcgaactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 15029792  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| || |||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  15029793 aaaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaagcc 15029855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 31 - 163
Target Start/End: Complemental strand, 18149864 - 18149733
Alignment:
Q  31 agttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 130  Q
    |||| |||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18149864 agttggaaatagggaaataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 18149766  T
Q  131 tcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    || |||| |||||| ||||||||||||||||||    
T  18149765 tccaaatggtaggatcaaaagtgtaattaagcc 18149733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 18150108 - 18150270
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||| ||||||| | |||||||||| |||| |||||||||||||||||||||||||||       ||||||||||| ||| |||||||||||||||    
T  18150108 actaaaacggtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggatgattttgttcgattt 18150207  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||| ||||||||||| |||||||||  |||| || |||||||||||||||    
T  18150208 aaaagaggtaggaccaatttcgtgagtttgtcaaaatacaaggatcacaagtgtaattaagcc 18150270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 38901027 - 38901198
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||||||||||  ||| |||||| |||||||  |||||||||||       |||||||||||||||||||||||||||||||    
T  38901027 actaaaactgtcatttatgtgcgtttctg--gttggaaataaggagatataactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 38901123  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaatattag 175  Q
    ||||| | ||||||||||||||||  || |||||||| | ||||||||||||||||||||||||||||| |||||    
T  38901124 aaaaagggtaggaccattttcgtgctttagtcaaaatggaaggaccaaaagtgtaattaagccaaaaaaaattag 38901198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 4967154 - 4967317
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn-catatagtttaaggacgattttgttcgatt 99  Q
    ||||||||| |||||| | |||||||||  ||||||||||||||| ||||||||||||||||        ||||||||||| ||||||||||||||||||    
T  4967154 actaaaactatcatttatgtgcgtttctagagttagaaatagggatataggactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatt 4967253  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||| || || ||||||||| ||||||||||||||||   |||||||||||||||||||||||    
T  4967254 taaaagaggtaagaccatttttgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 4967317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 15115480 - 15115638
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||||||| |  |||| ||||||||| |||| ||||||||||||        ||||||||||||||||||||||||||||||    
T  15115480 actaaaactgtcatttatgtgcgttttttgagttggaaatagggcgatatgactaaaactgcaaaa----atatagtttaaggacgattttgttcgattt 15115575  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||||||||||||||||||||||||   |||| ||||||||||||||||||    
T  15115576 aaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggatcaaaagtgtaattaagcc 15115638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 28289845 - 28289684
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||        |||||| |||| |||||||||||||||||||    
T  28289845 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactg-gaaaaaacatataatttagggacgattttgttcgattt 28289747  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || || ||| | ||||||||||||||||||||   |||| ||||||||||||||||||    
T  28289746 aaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcc 28289684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 21371081 - 21371247
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| ||||||||||||||||||||||| |||       ||||||||||| ||||||||||||| |||||    
T  21371081 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaa-catatagtttagggacgattttgtttgattt 21371179  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    |||| || |||||||| |||  |||||||||||||||   |||| |||||||||||||||||| ||||    
T  21371180 aaaagaggtaggaccaattttatgagttggtcaaaatgcaaggatcaaaagtgtaattaagcctaaaa 21371247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 39083521 - 39083361
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnnc-atatagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||||| || ||||||| |||| |||||| ||||||| ||||||||||||         |||||||||||| || |||||||||||||    
T  39083521 actaaaactgtcatttctgtgtgtttctggagttggaaatatggagatatgactaaaactgcaaaaaatatatatagtttaagaacaattttgttcgatt 39083422  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||| | ||||||||||||||    
T  39083421 taaaaaaaataggaccattttcgtgagttggtcaaaatgataggatc-aaagtgtaattaag 39083361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 6 - 159
Target Start/End: Complemental strand, 38900800 - 38900648
Alignment:
Q  6 aactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaa 105  Q
    ||||||||||| | | ||||| || |||| |||||||||||||||||||||||||||       |||||| |||| |||||||||||||||||||||||     
T  38900800 aactgtcatttatgtacgtttatggagttggaaatagggagataggactaaaactgcaaaaaa-catataatttagggacgattttgttcgatttaaaag 38900702  T
Q  106 agataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaatta 159  Q
    || ||||| |||||||||||||||||||||||   |||||||||||||||||||    
T  38900701 aggtaggatcattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 38900648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 14340478 - 14340401
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  14340478 gacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaaatgtaattaa 14340401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 5161744 - 5161620
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||||||||||| || |||| |||||||| ||||| ||||||||||||       |||||| ||||| ||| ||||||||||||||    
T  5161744 actaaaactgtcatttctatgcgtttttgaagttggaaataggaagataagactaaaactgcaaaaaaacatataatttaaagacaattttgttcgattt 5161645  T
Q  101 aaaaaagataggaccattttcgtga 125  Q
    |||||||||| ||| ||||||||||    
T  5161644 aaaaaagatatgacaattttcgtga 5161620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 160
Target Start/End: Complemental strand, 4966973 - 4966819
Alignment:
Q  4 aaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaa 103  Q
    ||||||||||||||| ||| |||||  |||| ||||||||| |||| ||||||||||||       ||||||||||| ||||||||||||||||||||||    
T  4966973 aaaactgtcatttctgtgcatttctagagttggaaataggg-gatatgactaaaactgctaaaaa-catatagtttagggacgattttgttcgatttaaa 4966876  T
Q  104 aaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    | ||  || || ||||||||||||||||||||||   ||||||||||||||||||||    
T  4966875 agaggcagtactattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 4966819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 21370776 - 21370689
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |||| | |||||||    
T  21370776 atagtttaaagacgattttgttcgatttaaaaaagatataaccattttcgtcagttggtcaaaatagtaggacaaaaaatataattaa 21370689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 32697616 - 32697771
Alignment:
Q  9 tgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn--catatagtttaaggacgattttgttcgatttaaaaaa 106  Q
    |||||||||| || ||||||| |||| ||||||||||| ||  |||||||||||         ||||||||||| |||||||| |||||||||||||| |    
T  32697616 tgtcatttctgtgtgtttctggagttggaaatagggaggtatcactaaaactgcaaaataaaacatatagtttagggacgattctgttcgatttaaaaga 32697715  T
Q  107 gataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    | |||||||| ||||||||||||||||||||   | ||||||||||||||||||||    
T  32697716 ggtaggaccaatttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaagc 32697771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 31618967 - 31619037
Alignment:
Q  171 attagttaaccttatgtgtgaaagatgcaatgtatatcctatggactatggtaatctacaatttgtaacta 241  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  31618967 attagttaaccttgtgtgtgaaaaatgcaatgtatatgctatggactatggtaatctacaatttgtaacta 31619037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 14340792 - 14340953
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatata--gtttaaggacgattttgttcgat 98  Q
    |||||||||||||||||| | ||||| || |||| |||||| |||||||||||||||||| |        |||||  ||||| |||||||||||||||||    
T  14340792 actaaaactgtcatttctctacgtttttggagttggaaataaggagataggactaaaactacaaaaaaaaatatatagtttatggacgattttgttcgat 14340891  T
Q  99 ttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||| |  || ||||| ||||||||||||||||||||   || ||||||| |||||||||    
T  14340892 ttaaaagatgtatgaccaatttcgtgagttggtcaaaatgcaagtaccaaaaatgtaattaa 14340953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 10721945 - 10721787
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattta 101  Q
    ||||||||||||||||| | |||||||| ||||  ||||||| || |||||||||||||||          |||||||| |||||||||||||||||||     
T  10721945 ctaaaactgtcatttctctacgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttta-ggacgattttgttcgatttg 10721848  T
Q  102 aaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    ||| ||| | ||||||||||||||| ||||||||||   |||||||||| |||||||||||    
T  10721847 aaagagacaagaccattttcgtgagctggtcaaaatgtgaggaccaaaaatgtaattaagc 10721787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 22651767 - 22651857
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||| ||||||||||||||||||| ||||||  || |||||||||||||| ||||||||||   ||||| |||||||||||||||||    
T  22651767 atagtttatggacgattttgttcgatttgaaaaaggcagaaccattttcgtgagctggtcaaaatgcgaggacaaaaagtgtaattaagcc 22651857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 41834445 - 41834605
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncat-atagtttaaggacgattttgttcgattt 100  Q
    ||||||||||||||||| ||||||||   ||||  ||||||| || |||||||||||||||       ||| |||||||| ||||| ||||||||||| |    
T  41834445 ctaaaactgtcatttctctgcgtttcaagagttgaaaatagg-aggtaggactaaaactgcaaaaaaacatgatagttta-ggacggttttgttcgatct 41834542  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
     ||| ||  ||||||||||||||||| ||||||||||   |||||||||||||||||||||||    
T  41834543 gaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcc 41834605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 20266371 - 20266458
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||| ||||||||||||||||||| ||| ||| | |||||||||||| || |||||||||||  ||||||||||||| ||||||    
T  20266371 atagtttagggacgattttgttcgatttgaaagagacatgaccattttcgtaagctggtcaaaatacgaggaccaaaagtgcaattaa 20266458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 22651506 - 22651347
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncat-atagtttaaggacgattttgttcgatt 99  Q
    |||||||||| ||||| | |||||||||| ||||  ||||| |||| |||||||||||||||       ||| |||||||||||| | ||||||| ||||    
T  22651506 actaaaactgccatttttgtgcgtttctggagttgaaaataaggaggtaggactaaaactgcaaaaa--catgatagtttaaggatggttttgtttgatt 22651409  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    ||||| ||  | |||||||| |||||| |||||||||||  || ||||||| ||||||||||    
T  22651408 taaaagaggcatgaccatttccgtgagctggtcaaaatacgagaaccaaaaatgtaattaag 22651347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 16752675 - 16752582
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||| ||||||||||||||||||| ||| |   | || |||||||||||| ||||||||||    ||||||||||||||||||||||    
T  16752675 catatagtttatggacgattttgttcgatttgaaagaagcatgatcattttcgtgagctggtcaaaatgcagggaccaaaagtgtaattaagcc 16752582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 27307220 - 27307061
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattta 101  Q
    |||||||||||||||||||||||||||| ||||  ||||| |||| || ||||||||||||          ||||||| |||| |||||||||| ||||     
T  27307220 ctaaaactgtcatttctatgcgtttctggagttgaaaata-ggaggtaagactaaaactgcaaaaaacatgatagttt-aggatgattttgttcaatttg 27307123  T
Q  102 aaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||| | | | |||||||||| | |||||||||||||   || ||||||||||||||||||||    
T  27307122 aaagaaacatgaccattttcataagttggtcaaaatgcgagaaccaaaagtgtaattaagcc 27307061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 5161976 - 5162115
Alignment:
Q  24 tttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgt 123  Q
    |||||| ||||  |||| ||||||||||||||||| |||       |||||| |||| ||||||||||||||||||||||| || || ||| | | || |    
T  5161976 tttctgaagttgtaaattgggagataggactaaaattgcaaaaaaacatataatttagggacgattttgttcgatttaaaagaggtatgactaatctcat 5162075  T
Q  124 gagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||||||   ||||  |||| ||||||||||||    
T  5162076 gagttggtcaaaatgcaaggataaaaaatgtaattaagcc 5162115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 17260676 - 17260766
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||| ||| | ||||||||||||| ||| || ||| | ||||||||||| |||||||||||   ||||||||||||| |||||||||    
T  17260676 atagtttagggatggttttgttcgatttgaaagaggtagaatcattttcgtgaattggtcaaaatgcgaggaccaaaagtgcaattaagcc 17260766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 27307513 - 27307611
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    ||||||||||| ||||| ||||||||||||| ||| ||  || |||||||||||||  ||||||||||    ||||||||||| ||||||||| |||||    
T  27307513 catatagtttatggacggttttgttcgatttgaaagagggagaaccattttcgtgaactggtcaaaatgcggggaccaaaagtctaattaagctaaaaa 27307611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 32305977 - 32305844
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncat-atagtttaaggacgattttgttcgattt 100  Q
    ||||||||||||||||| || ||||||| ||||  ||||| | || |||||||||||||||       ||| |||||||| |||||||||||||||||||    
T  32305977 ctaaaactgtcatttctctgtgtttctggagttgaaaataag-aggtaggactaaaactgcaaaaa--catgatagtttagggacgattttgttcgattt 32305881  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaat 137  Q
    |||| || ||| || ||||||||||| || |||||||    
T  32305880 aaaagaggtagaacaattttcgtgagctgatcaaaat 32305844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 28495296 - 28495377
Alignment:
Q  82 ggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| |||||||||||||| ||| ||  | ||||||||||||||| |||||||||||    |||||||||||||||||||||    
T  28495296 ggacaattttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatatggagaccaaaagtgtaattaagcc 28495377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 164244 - 164189
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    ||||||| |||||||||| |||||||| |  |||||||||||||||||||||||||    
T  164244 aggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccaa 164189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 24362328 - 24362381
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || |||||||  |||||||||||||||||||||||    
T  24362328 aggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 24362381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 8647521 - 8647437
Alignment:
Q  80 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    |||||| |||||||||  ||| |||| |  ||||||| |||||||||| || ||||| |  ||||||||||||||||||||||||    
T  8647521 aaggaccattttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcca 8647437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 19359211 - 19359135
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    |||||||| |||| |||| |  ||||||| |||||||||| || ||||| |  ||||||||||||||||||||||||    
T  19359211 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagcca 19359135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 28595270 - 28595182
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||||| ||||||||||||||| ||| ||| |   | ||||||||| || || |||||||||||  ||||||||||||| |||||||    
T  28595270 atagtttagggacgattttgttcgttttgaaagaagcatgaccatttttgtaagctggtcaaaatacgaggaccaaaagtgcaattaag 28595182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 5819421 - 5819476
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||||    
T  5819421 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 5819476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 18183461 - 18183520
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||||||| |||||||||| || ||||| |  ||||||||||||||||||||||| |||||    
T  18183461 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaaa 18183520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 28495003 - 28494845
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattta 101  Q
    |||||| ||||| |||| |||||||||| ||||  ||||||| || |||||||||||||||          |||||||| ||||  |||||||||||||     
T  28495003 ctaaaattgtcacttctctgcgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttta-ggacagttttgttcgatttg 28494906  T
Q  102 aaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    ||| ||  || ||||||||| |||  ||||||||||   ||||||||||||||||||||||    
T  28494905 aaagaggcagaaccattttcctgaactggtcaaaatgtaaggaccaaaagtgtaattaagc 28494845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 15709021 - 15708971
Alignment:
Q  113 accattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| |||||||||| || ||||| | ||||||||||||||||||||||||    
T  15709021 accagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagcc 15708971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 21370836 - 21370794
Alignment:
Q  20 tgcgtttctgtagttagaaatagggagataggactaaaactgc 62  Q
    |||||||||| |||| ||||||||||||||||||||||| |||    
T  21370836 tgcgtttctggagttggaaatagggagataggactaaaattgc 21370794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 2865247 - 2865300
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  2865247 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 2865300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14340541 - 14340480
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgc 62  Q
    |||||||||||||||||| |  ||||||  |||| ||||||| ||||||||| |||||||||    
T  14340541 actaaaactgtcatttctgtaggtttctagagttggaaatagagagataggattaaaactgc 14340480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 16753045 - 16753114
Alignment:
Q  92 gttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    ||||||||| ||| ||  || |||||||||||||||||||||||||   | |||||||| ||||||||||    
T  16753045 gttcgatttgaaagaggcagaaccattttcgtgagttggtcaaaatgcgatgaccaaaaatgtaattaag 16753114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 19359628 - 19359681
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  19359628 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19359681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 24331612 - 24331559
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| | |||||| |  |||||||||||||||||||||||    
T  24331612 aggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagcc 24331559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 4623231 - 4623147
Alignment:
Q  80 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    |||||| |||||||||  ||| ||| ||  ||||||| ||||||||||  ||||||| |  | ||||||||||||||||||||||    
T  4623231 aaggacaattttgttctgttttaaagaggcaggaccaatttcgtgagtaagtcaaaacacgatgaccaaaagtgtaattaagcca 4623147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 13557081 - 13557018
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 137  Q
    |||||||||| ||||||||||| ||||| ||| ||  | ||||||||||||||| ||||||||||    
T  13557081 atagtttaag-acgattttgtttgatttgaaagaggcatgaccattttcgtgagctggtcaaaat 13557018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 15372365 - 15372425
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaat 170  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||| || ||||||    
T  15372365 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaaaaat 15372425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 4e-59; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 34789543 - 34789379
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||| |||||||| | |||||||||| |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  34789543 actaaaattgtcatttatgtgcgtttctggagtttgaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 34789445  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaa 166  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34789444 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaaa 34789379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 21034397 - 21034233
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||||||| || |||| |||||||||||||| |||||||||||        |||||||||||||||||||||||||||||||    
T  21034397 actaaaactgtcatttatgtgcgtttatggagttggaaatagggagatatgactaaaactgtaaaaaaacatatagtttaaggacgattttgttcgattt 21034298  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21034297 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 21034233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 26974445 - 26974283
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  26974445 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaaaacatatagtttaaggacgattttgttcgattt 26974346  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||||| ||||||||||||||||| || ||||| |||||||||||||||||||||||||    
T  26974345 aaaaaagatatgaccattttcgtgagtttgttaaaatggtaggaccaaaagtgtaattaagcc 26974283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 56077709 - 56077876
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||  |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  56077709 actaaaactgtcatttttgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 56077807  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  56077808 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaagcccaaaaa 56077876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 45838932 - 45839092
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn--catatagtttaaggacgattttgttcgat 98  Q
    |||||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||    
T  45838932 actaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcgat 45839031  T
Q  99 ttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45839032 ttaaaaaagataggacca-tttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 45839092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 28465466 - 28465630
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||  |||| | ||||||| || |||| ||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||    
T  28465466 actaaaactgctatttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 28465564  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaa 166  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28465565 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaaa 28465630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 14440213 - 14440374
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||  |||| |||||||||||||| ||||||||||||       ||||||||||||||| |||||||||||||||    
T  14440213 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaa-catatagtttaaggatgattttgttcgattt 14440311  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  14440312 aaaaaagataggaccattttcgtaagttggtcaaaatggtaggaccaaaagtataattaagcc 14440374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 54440954 - 54441113
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||    |||||||||| |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  54440954 actaaaactgtcattgacgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 54441052  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||    
T  54441053 aaaaaagataggaccattttcgtgagctgatcaaaatggtaggaccaaaagtgtaattaag 54441113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 12593185 - 12593024
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| ||||  |||||||||||||||| ||||| |||       |||||||||||||||||||||||||||||||    
T  12593185 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 12593087  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| || |||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  12593086 aaaaaaggtatgaccattttcgtgagttggtcaaactggtaggaccaaaagtgtaattaagcc 12593024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 28166163 - 28166007
Alignment:
Q  3 taaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaa 102  Q
    ||||||| |||||||| ||||||| |||||||  ||||||||||||||||||||||||||        ||||||||||||||| ||||||||||||||||    
T  28166163 taaaactatcatttctgtgcgtttttgtagttgaaaatagggagataggactaaaactgcaaaaaaa-atatagtttaaggacaattttgttcgatttaa 28166065  T
Q  103 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  28166064 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaaatttaattaa 28166007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 46736816 - 46736655
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| ||||  |||||||||||||||| |||| ||||       |||||||||||||||| ||||||||||||||    
T  46736816 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaatctgcaaaaaa-catatagtttaaggacaattttgttcgattt 46736718  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| ||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  46736717 aaaaaaaataagaccattttcgtgagttggtcaaaatagtagaaccaaaagtataattaagcc 46736655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 41114320 - 41114160
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn-catatagtttaaggacgattttgttcgatt 99  Q
    ||||||| |||||||||| |||||||||  |||| |||||||||||||| ||||||||||||        ||||||||||||||||| ||||||||||||    
T  41114320 actaaaattgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaaaacatatagtttaaggacgtttttgttcgatt 41114221  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  41114220 taaaaaagataggacccttttcgtgagttggtcaaaatggtaggaccaaaagtgtcattaa 41114160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 19529031 - 19528869
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||| | |||| |||||||||||||||||||||||||||       ||||||||||| |||||||||| ||||||||    
T  19529031 actaaaactgtcatttctgtgcgtttccggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggacgattttattcgattt 19528932  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||| |||||||| |||||||||||   |||||||||||||||||||||||    
T  19528931 aaaagaggtaggaccaatttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaagcc 19528869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 34789767 - 34789927
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||||||| || |||| |||||||||||||||||||||||||||       ||||||||||| |||| ||||||||||||||    
T  34789767 actaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggacaattttgttcgattt 34789866  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||| || |||||||| ||||||||||||||||||||   |||||||||||||||||||||    
T  34789867 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 34789927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 34807524 - 34807682
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||| ||    
T  34807524 actaaaactgtcatttctatgcgtttatggagttggaaatagggagataggactaaaactgccaaaaa-catatagtttaaggacgattttgttcgaatt 34807622  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||||| |  |||||||||||||| |||||||| || |||||||| | |||||||    
T  34807623 aaaaaagatagaataattttcgtgagttgatcaaaataataagaccaaaaatataattaa 34807682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 55677342 - 55677504
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||||||| || |||| ||||||||||||||||||||||| ||        |||||||||||  ||||||||||||||||||    
T  55677342 actaaaactgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaattgtaaaaaaacatatagtttagagacgattttgttcgattt 55677441  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  55677442 aaaagaggtaggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaagcc 55677504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 46737040 - 46737201
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| || ||||| ||||| ||||||||||||       ||||||||||| |||||||||||||||||||    
T  46737040 actaaaactgtcatttctgtgcgtttctggagttggagataggaagatatgactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 46737138  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  46737139 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 46737201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 6616834 - 6616675
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| ||||||| ||| ||||||||| || ||       |||||||||||||||||||||||||||||||    
T  6616834 actaaaactgtcatttatgtgcgtttctggagttggaaatagagaggtaggactaacacagcaaaaaaacatatagtttaaggacgattttgttcgattt 6616735  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||| ||| |||||||||||||||||| |||||||  ||| |||||||||||||||||    
T  6616734 aaaaaaaataagaccattttcgtgagttgatcaaaatgatagaaccaaaagtgtaattaa 6616675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 14439989 - 14439831
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||       ||||||||||| |||||||||||||  ||||    
T  14439989 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgtttaattt 14439891  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||| || ||||| ||||||||||||||||||||   |||||||||| |||||||||    
T  14439890 aaaaaaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 14439831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 21034621 - 21034783
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | || ||||||| |||| ||||||||||||||| |||||||||||        |||||||| | |||||||||||||||||||    
T  21034621 actaaaactgtcatttttgtgtgtttctggagttggaaatagggagatagaactaaaactgcaaaaaaaaatatagttcagggacgattttgttcgattt 21034720  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| ||||||||||| ||||||||||||||||||||   |||||||||| ||||||||||||    
T  21034721 aaaagagataggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagcc 21034783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 34807278 - 34807116
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| |||||| ||||||||||||||||||||       |||||| |||| |||||||||||||||||||    
T  34807278 actaaaactgtcatttatgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaaacatatactttagggacgattttgttcgattt 34807179  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || || ||||| |||||||||||| |||||||   |||||||||||||||||||||||    
T  34807178 aaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagcc 34807116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33689989 - 33689829
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||| |||||||||| | |||||||||| ||||  ||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||    
T  33689989 actaacactgtcatttatgtgcgtttctggagttgtaaatagggagatatgactaaaactgcaaaaa--catatagtttaaggacgattttgttcgattt 33689892  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||| ||| ||||||||||||||||   |||||||||||||||||||||||    
T  33689891 aaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 33689829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 12593408 - 12593575
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||||||| || |||||||||| ||||  ||||||||||||||||||||||||||        ||||||||||  ||||||||||||||||||    
T  12593408 actaaaactgtcattcctgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaat-atatagtttacagacgattttgttcgattt 12593506  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||| || || ||||| ||||||||||||||||||||   ||||||||||||||||||||||| |||||    
T  12593507 aaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctaaaaa 12593575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 24851850 - 24852010
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||| |||||||| |||||||||| |||| |||||||  ||||||||||||||||||       ||||||||||| |||||||||||||||||||    
T  24851850 actaaaactttcatttctgtgcgtttctggagttggaaatagaaagataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 24851949  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||| || ||||| || ||||||||||||||||||||   |||||||||||| ||||||||    
T  24851950 aaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtataattaag 24852010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 28465242 - 28465074
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| ||||  ||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||    
T  28465242 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 28465144  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaat 170  Q
    |||| || ||||| || |||||| ||||||||||||| | ||||| ||||||||||||||| | ||||||    
T  28465143 aaaagaggtaggatcaatttcgtaagttggtcaaaatggaaggactaaaagtgtaattaagtctaaaaat 28465074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 45838705 - 45838541
Alignment:
Q  4 aaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaa 103  Q
    |||||| |||||||| ||||||| || |||  |||||||||||||||||||||||||||       ||||||||||| ||||||||||||||||||||||    
T  45838705 aaaactatcatttctgtgcgtttttgaagtaggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaa 45838607  T
Q  104 aaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    | || |||||||| || ||||||||||||||||||  |||||||||||||||| |||||| |||||    
T  45838606 agaggtaggaccaattacgtgagttggtcaaaatacaaggaccaaaagtgtaaataagcctaaaaa 45838541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 54440730 - 54440573
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| ||| |||||| ||||  ||||||||||||||||||||||||||        | |||||||| |||||||||||||||||||    
T  54440730 actaaaactgtcatttctgtgcatttctgaagttgaaaatagggagataggactaaaactgcaaaaa---acatagtttagggacgattttgttcgattt 54440634  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||| || |||||||| ||||||||||||||||||||   |||||||||||||||||||||    
T  54440633 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 54440573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 19529078 - 19529246
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| ||||||| |  |||| |||||| |||||||| |||||||||||       |||||||||||| ||||||||||||| ||||    
T  19529078 actaaaactgtcatttctgtgcgttttttaagttggaaatatggagatagaactaaaactgcaaaaaaacatatagtttaaagacgattttgttcaattt 19529177  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||| |||||| | ||||||  | ||||||||||||| |||||| |||||||||||||||||| |||||    
T  19529178 aaaagagatagaatcatttttataagttggtcaaaatggtaggagcaaaagtgtaattaagcctaaaaa 19529246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 72 - 163
Target Start/End: Complemental strand, 24851407 - 24851316
Alignment:
Q  72 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  24851407 tatagtttaaggacgattttgttcaatttaaaaaagatagcaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaagcc 24851316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 36168493 - 36168332
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn--catatagtttaaggacgattttgttcgat 98  Q
    |||| ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||         |||||| ||||||||||||||||||||||    
T  36168493 actataactgtcatttatatgcgtttctggagttagaaatagggagataagactaaaactgcaaaaaaaaacatataatttaaggacgattttgttcgat 36168394  T
Q  99 ttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||| || || ||||| ||||||| ||||||||||||   |||| |||||||||||||||    
T  36168393 ttaaaagaggtaagaccaatttcgtgggttggtcaaaatgcaaggagcaaaagtgtaattaa 36168332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 163
Target Start/End: Original strand, 41608870 - 41608961
Alignment:
Q  72 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||| ||||||||||| ||||||||| || |||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  41608870 tatagtttaagaacgattttgttggatttaaaagaggtaggaccaatttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 41608961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 1397683 - 1397597
Alignment:
Q  75 agtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| || ||| ||||||||||||||||    
T  1397683 agtttaaggacgattttgttcgatttaaaaaagataggaccatttttatgagttggtcaaaatggttggatcaaaagtgtaattaag 1397597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 33777725 - 33777635
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||||||||||||||||||||| ||||| ||| || ||||||||||||||||||||||| |||||| |||||||||||||||    
T  33777725 catatagtttaaggacgattttgttcgattttaaaaaaatatgatcattttcgtgagttggtcaaaatggtaggaacaaaagtgtaattaa 33777635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 36168716 - 36168883
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||| |||| | ||| ||| || ||||  ||||||||||||||||||||||| ||       |||||| |||||| |  ||||||||| ||||    
T  36168716 actaaaactgtgatttatgtgcatttatggagttgaaaatagggagataggactaaaaccgcaaaaaa-catataatttaagaataattttgttctattt 36168814  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||||| |||||| ||||||||||||||||||||||| |||||||||| |||||||||||||| |||||    
T  36168815 aaaaaaaataggatcattttcgtgagttggtcaaaatggtaggaccaagagtgtaattaagcctaaaaa 36168883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 35643728 - 35643549
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn-----------catatagtttaaggacgatt 89  Q
    |||||||||||||||||| ||||||| || ||||  ||||||||||||||||||||||||||                  ||||||||||||||||||||    
T  35643728 actaaaactgtcatttctgtgcgtttatggagttgtaaatagggagataggactaaaactgcaaaaaaaaaaaaaaaaaacatatagtttaaggacgatt 35643629  T
Q  90 ttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    || ||| |||| |||||||||||||||||||||||||||||||||||| ||| |||||| ||||| ||||| || |||||    
T  35643628 ttattcaattttaaaaagataggaccattttcgtgagttggtcaaaatggtaagaccaatagtgtgattaaacctaaaaa 35643549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 41608536 - 41608377
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn--catatagtttaaggacgattttgttcgat 98  Q
    |||||||||||||||||| ||||||| || |||| |||||| ||||||||||||||||||||         ||||||||||  |||||||||||||||||    
T  41608536 actaaaactgtcatttctgtgcgtttttgaagttggaaatatggagataggactaaaactgcaaaaaaaaacatatagttt--ggacgattttgttcgat 41608439  T
Q  99 ttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||| || || ||||| |||| ||||||| |||||||   ||||||||||||||||||||    
T  41608438 ttaaaagaggtatgaccaatttcatgagttgatcaaaatgcaaggaccaaaagtgtaattaa 41608377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 35193467 - 35193334
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattta 101  Q
    ||||||||||||||||| |||||||||| ||||  ||||||| ||||||||||||||||||       ||||||||||| |||||||||||||||||||     
T  35193467 ctaaaactgtcatttctctgcgtttctgaagttgaaaatagg-agataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttg 35193370  T
Q  102 aaaaagataggaccattttcgtgagttggtcaaaat 137  Q
    ||| || |||||||||||||||||| || |||||||    
T  35193369 aaagaggtaggaccattttcgtgagctgatcaaaat 35193334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 16214880 - 16215038
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||| |||||| | || ||||||| ||||  ||||||| |||||| | |||||||||        ||||||||||||||||||||| ||| ||||    
T  16214880 actaaaactatcatttatgtgtgtttctggagttgaaaataggaagatagaattaaaactgcaaaaaat-atatagtttaaggacgattttattcaattt 16214978  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||| || ||||||||| ||||| |||||||  ||||||||||||| |||||||    
T  16214979 aaaaaagatatgatcattttcgtaagttgatcaaaatgataggaccaaaagtataattaa 16215038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 17504412 - 17504479
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 137  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  17504412 catatagtttaaggacggttttgttcgatttaaaagagataggaccattttcgtgagctgttcaaaat 17504479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 71 - 166
Target Start/End: Original strand, 30597973 - 30598068
Alignment:
Q  71 atatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaa 166  Q
    ||||| |||| ||||||||||||||||||||||| ||| || |||| || |||||||||||||||| |  ||||||||||||||||| ||||||||    
T  30597973 atataatttagggacgattttgttcgatttaaaagagacagaaccaattccgtgagttggtcaaaacacgaggaccaaaagtgtaatcaagccaaa 30598068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 167
Target Start/End: Original strand, 33778027 - 33778162
Alignment:
Q  31 agttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 130  Q
    |||| ||||||||||||||| |||||||||||       |||||| |||| | ||||||||||| ||||||||| || ||| | |||||||||||||| |    
T  33778027 agttggaaatagggagatagaactaaaactgcaaaaaa-catataatttaggaacgattttgtttgatttaaaagaggtagaatcattttcgtgagttag 33778125  T
Q  131 tcaaaatagtaggaccaaaagtgtaattaagccaaaa 167  Q
    ||||||| |||| || ||||||||||||||| |||||    
T  33778126 tcaaaatggtagaacgaaaagtgtaattaagtcaaaa 33778162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 6617070 - 6617182
Alignment:
Q  24 tttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgt 123  Q
    |||||| |||| || ||||||||||||||||||||||||        |||||||||| |||||||||| |||||||||||| || |||||||| ||||||    
T  6617070 tttctggagttggagatagggagataggactaaaactgcaaaaaaa-atatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgt 6617168  T
Q  124 gagttggtcaaaat 137  Q
    ||||| ||||||||    
T  6617169 gagttagtcaaaat 6617182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 169
Target Start/End: Original strand, 26974664 - 26974797
Alignment:
Q  36 gaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaa 135  Q
    |||||||| ||||| ||||||||||||       ||||||||||| |||| |||||||||||||||||| || |||||||| |||||||| ||  |||||    
T  26974664 gaaataggaagatatgactaaaactgcaaaaaaacatatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgaattattcaaa 26974763  T
Q  136 atagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||   |||||||||| ||||||||| ||| ||||    
T  26974764 atgcaaggaccaaaaatgtaattaacccataaaa 26974797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 229251 - 229164
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||||||||||||| |||| ||| ||  | ||||||||||| ||| |||||||||||  ||||||||||||||||||||    
T  229251 atagtttaaggacgattttgttcaatttgaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaagtgtaattaa 229164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 44219448 - 44219377
Alignment:
Q  90 ttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||| |||||||||||| ||||||| |||||||||||||| ||||||  |||||||||||||||||||||    
T  44219448 ttgttcaatttaaaaaagagaggaccaatttcgtgagttggttaaaatacgaggaccaaaagtgtaattaag 44219377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 229544 - 229702
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncat-atagtttaaggacgattttgttcgatt 99  Q
    ||||||| ||||| |||| |||||||||| ||||  ||||| |||| ||||| |||||||||       ||| |||||||||||||||||||||| ||||    
T  229544 actaaaattgtcacttctgtgcgtttctggagttgaaaataaggaggtaggattaaaactgcaaaaa--catgatagtttaaggacgattttgtttgatt 229641  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    | ||| ||  | ||||||||||||||| ||||||||||   | ||||||||||||||||||    
T  229642 tgaaagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 229702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 23986610 - 23986521
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    |||||||| ||||  ||||||||||||| ||| ||| | ||||||||||||||| ||||||||||   ||||||||||||| ||||||||    
T  23986610 atagtttagggacagttttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgaaattaagc 23986521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24851626 - 24851565
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgc 62  Q
    |||||||||||||||| | |||||||||| |||| |||||||||||||| ||||||||||||    
T  24851626 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataagactaaaactgc 24851565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 18965301 - 18965141
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncat-atagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||| |||||||||||  ||||  ||||| |||| ||| |||||||||||       ||| |||||||||||||||||||||||||||    
T  18965301 actaaaactgtcatttatatgcgtttctagagttgaaaataaggaggtagaactaaaactgcaaaaa--catgatagtttaaggacgattttgttcgatt 18965204  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    | ||| ||  | |||| |||||||||||  || |||||   |||| ||||| |||||||||||    
T  18965203 tgaaagaggcaagaccgttttcgtgagtaagttaaaatgtgaggatcaaaaatgtaattaagc 18965141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 17504133 - 17503974
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattta 101  Q
    ||||||||||||||||| | |||||||| ||||  ||||||| || |||||||||||||||          |||||||| ||||| || ||||| ||||     
T  17504133 ctaaaactgtcatttctctacgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttta-ggacggttatgttccatttg 17504036  T
Q  102 aaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||| ||  ||||||||||||||||| ||||||||||   |||||||| ||| ||||||||||    
T  17504035 aaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaagcc 17503974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 11153639 - 11153698
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||||||||    
T  11153639 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaaaaa 11153698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 35193766 - 35193848
Alignment:
Q  81 aggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| ||||||| ||||| ||| ||  ||||||||||||||||| |  |||||||   |||||||||||||||||||||||    
T  35193766 aggacggttttgttagatttgaaagaggcaggaccattttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaagcc 35193848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 167
Target Start/End: Original strand, 40160554 - 40160640
Alignment:
Q  81 aggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaa 167  Q
    |||||| |||||||| |||| ||| ||  | ||| ||||||||||||||||||||||   |||||||||| ||||||||| ||||||    
T  40160554 aggacggttttgttcaatttgaaagaggcatgactattttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaaaccaaaa 40160640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 51309961 - 51310051
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||| ||||  ||||||||||||| ||| ||  | ||||||||||||||| |||| |||||   ||||||||||||| |||||||||    
T  51309961 atagtttagggactgttttgttcgatttgaaagaggcatgaccattttcgtgagctggtaaaaatgcgaggaccaaaagtgcaattaagcc 51310051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 10795777 - 10795854
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||||||||||| ||| ||| ||||||| ||||||||| || |||||||    ||| |||||||||||||||    
T  10795777 gacgattttgttcgatttgaaagagagaggaccaatttcgtgagctgttcaaaatgcggggatcaaaagtgtaattaa 10795854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 24336234 - 24336307
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||| ||| ||  ||||||||||||||||| | ||||||||   |||| ||||||||||||||||    
T  24336234 ttttgttcgatttgaaagaggcaggaccattttcgtgagcttgtcaaaatgcgaggatcaaaagtgtaattaag 24336307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 40160187 - 40160094
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||| ||||| ||||||||||||||||| ||  | ||| ||||||||||| |||| |||||    ||| ||||| ||||||||||||    
T  40160187 catatagtttagggacggttttgttcgatttaaaagaggcatgactattttcgtgagctggttaaaatgcggggatcaaaaatgtaattaagcc 40160094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 20958351 - 20958403
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    |||||||||||||||||| || |||||||  ||||| ||||||||||||||||    
T  20958351 aggaccattttcgtgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 35644042 - 35644106
Alignment:
Q  97 atttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||||| || || ||||  ||||||||||||||||||||   |||||||||||||||||||||    
T  35644042 atttaaaagaggtatgacctatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 35644106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 16691563 - 16691618
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    |||||||||||||||||| |||||||| |   ||| ||||||||||||||||||||    
T  16691563 aggaccattttcgtgagtaggtcaaaacacagggatcaaaagtgtaattaagccaa 16691618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 24335836 - 24335761
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||||| ||| ||  | ||||||||||||||| ||||||||||   |||| | ||||||||||||||||    
T  24335836 ttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggatcgaaagtgtaattaagcc 24335761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 22434232 - 22434174
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    ||||||| ||||||||||  | ||||| |  ||||||||||||||||||||||||||||    
T  22434232 aggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagccaaaaa 22434174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 46193458 - 46193404
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    ||||||| |||||||||| || ||||| |  ||||||||||||||||||||||||    
T  46193458 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcca 46193404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 15523288 - 15523235
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  15523288 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 15523235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 23494935 - 23494988
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  23494935 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 23494988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 25938163 - 25938216
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  25938163 aggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcc 25938216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 31297161 - 31297230
Alignment:
Q  89 tttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaatt 158  Q
    |||||||||||||||||||  | ||||| ||||||||||||||  |||||  || |||||||||| ||||    
T  31297161 tttgttcgatttaaaaaaggcatgaccaatttcgtgagttggtttaaatacgagaaccaaaagtgcaatt 31297230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 51641302 - 51641374
Alignment:
Q  89 tttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||| ||||||||||||  |||| || ||||||||||| ||| ||||   ||||| |||||||||||||||    
T  51641302 tttgtttgatttaaaaaaggcaggatcaatttcgtgagtttgtctaaatgcaaggactaaaagtgtaattaag 51641374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 4e-59; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 51828342 - 51828506
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||    
T  51828342 actaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacaattttgttcgattt 51828441  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  51828442 aaaaaatatatgaccattttcgtgagttggtcaaagtggtaggaccaaaagtgtaattaagccaa 51828506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 47431858 - 47431696
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||    
T  47431858 actaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaacatatagtttaaagacgattttgttcgattt 47431759  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || || |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  47431758 aaaagaggtatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 47431696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 51473240 - 51473399
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||||||| || |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  51473240 actaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 51473339  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  51473340 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 51473399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 41998391 - 41998229
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| | ||||| || |||| |||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||    
T  41998391 actaaaactgtcatttctgttcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 41998292  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  41998291 aaaaaagataggaccattttcgcgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 41998229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 38535470 - 38535309
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||||||| || |||| ||||||||||||||||||| |||||||       |||||||||||||||||||||||||||||||    
T  38535470 actaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactgaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 38535372  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  38535371 aaaaaagataggaccattttcctgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 38535309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 55389766 - 55389609
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  55389766 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 55389668  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaatta 159  Q
    ||||||| |||||||||||||||||||||||| |||| | |||||||||||||||||||    
T  55389667 aaaaaaggtaggaccattttcgtgagttggtcgaaatgggaggaccaaaagtgtaatta 55389609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 2051460 - 2051295
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn---catatagtttaaggacgattttgttcga 97  Q
    |||||||||||||||| | |||||||||| ||||||||||||||| |||||| |||||||||          ||||||||||||| ||||||||||||||    
T  2051460 actaaaactgtcatttttgtgcgtttctggagttagaaatagggaaataggaataaaactgcaaaaaaaaaacatatagtttaagaacgattttgttcga 2051361  T
Q  98 tttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2051360 tttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 2051295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 43678456 - 43678293
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||| ||||| |||| |||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||    
T  43678456 actaaaactgtcatttatgtgcgcttctggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 43678358  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  43678357 aaaaaagatatgaccatgttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 43678293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 49951707 - 49951549
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||| |||| | ||||||| || |||| ||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||    
T  49951707 actaaaactgttatttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 49951609  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  49951608 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 49951549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 46013807 - 46013968
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  46013807 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 46013906  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    ||||||||||| |||||||| | ||||||||||||||  ||| |||||||||||||||||||    
T  46013907 aaaaaagatagaaccatttttgggagttggtcaaaatgatagtaccaaaagtgtaattaagc 46013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 51828925 - 51829089
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||||||| || |||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||| || ||    
T  51828925 actaaaactgtcatttatgtgcgtttatgaagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgtttgaatt 51829023  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaa 166  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  51829024 aaaaaagatacgaccattttcgtgagttgatcaaaatagtatgaccaaaagtgtaattaagccaaa 51829089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 32730774 - 32730933
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||||||||| |||||||||       |||||||||||||||||||||||||| ||||    
T  32730774 actaaaactgtcatttctgtgcgtttctggagtttgaaatagggagataggattaaaactgcaaaaaa-catatagtttaaggacgattttgttcaattt 32730872  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| |||||||||||||||||||    
T  32730873 aaaaaagataggaccattttcttgagttggttaaaatggtatgaccaaaagtgtaattaag 32730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 40839037 - 40839204
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||       ||||||||||| |||||||||||||||||||    
T  40839037 actaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 40839135  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||| || || ||||||||||||||||| ||||||||   |||||||||||||||||||| ||||||||    
T  40839136 aaaagaggtaagaccattttcgtgagtttgtcaaaatgtgaggaccaaaagtgtaattaaaccaaaaaa 40839204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 44676857 - 44677015
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| ||||  |||||| ||||||||||||||| |||       |||||||||||||||||||||||||||||||    
T  44676857 actaaaactgtcatttatgtgcgtttctggagttgaaaatagagagataggactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 44676955  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44676956 aaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 44677015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 49720769 - 49720907
Alignment:
Q  24 tttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgt 123  Q
    |||||| |||| |||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  49720769 tttctggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgt 49720867  T
Q  124 gagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  49720868 gagttggtcaaaatagtaggaccaaaagtgtaattaagcc 49720907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 50662797 - 50662959
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| ||||  |||||||||| |||||||||||||||       |||||||||||||||||||||||||||||||    
T  50662797 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagctaggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 50662895  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    |||||||||| ||| ||||||||||||| |||||||| |||||||||||||| |||||||||||    
T  50662896 aaaaaagatatgactattttcgtgagtttgtcaaaatggtaggaccaaaagtataattaagcca 50662959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 52375488 - 52375320
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||       ||||||||||| |||||||||||||| ||||    
T  52375488 actaaaactgtcatttctatgcgtttctggagttagaaatagggagatagaactaaaactgcaaaaaa-catatagtttagggacgattttgttcaattt 52375390  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaat 170  Q
    |||| || || |||||||||||||| ||||| |||||   ||||||||||||||||||||||||||||||    
T  52375389 aaaagaggtatgaccattttcgtgaattggttaaaatgtgaggaccaaaagtgtaattaagccaaaaaat 52375320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 52237202 - 52237361
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||       |||||| |||| |||||||||||||||||||    
T  52237202 actaaaactgtcatttctgtgcgtttccggagttagaaatagggagataggactaaaactgcaaaaaa-catataatttagggacgattttgttcgattt 52237300  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||| || |||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  52237301 aaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 52237361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 16701174 - 16701338
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn--catatagtttaaggacgattttgttcgat 98  Q
    ||||||||||| ||||| |||||||| || |||| |||||||||||||| ||||||||||||         ||||||||||||||||||||||||||||     
T  16701174 actaaaactgtaatttcgatgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcgaa 16701273  T
Q  99 ttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  16701274 ttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaagcc 16701338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 40275256 - 40275092
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn-catatagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||        |||| |||||| |||| |||||||||||||    
T  40275256 actaaaactgtcatttctgtgcgtttctggagttagaaatatggagataggactaaaactgcaaaaaaaacatagagtttagggacaattttgttcgatt 40275157  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    ||||| || |||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  40275156 taaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcca 40275092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 30513883 - 30513724
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||| ||||||| ||||||||||||       ||||||||||||| |||||||| ||||||||    
T  30513883 actaaaactgtcatttctgtgcgtttctgaagttcgaaatatggagatatgactaaaactgcagaaaaacatatagtttaag-acgattttattcgattt 30513785  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||||||||||||||| ||||||||   |||||||||| ||||||||||    
T  30513784 aaaaaagataggaccattttcgtgagtttgtcaaaatgcaaggaccaaaaatgtaattaag 30513724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 330223 - 330382
Alignment:
Q  3 taaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaa 102  Q
    |||||||||||||||| |||||||||  |||| |||||||||||||| ||||||||||||       ||||||||||| ||||||||||||| |||||||    
T  330223 taaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaa-catatagtttagggacgattttgtttgatttaa 330321  T
Q  103 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||| |||||||||||||||||||||||||||||   ||||||||| |||||||||||||    
T  330322 aaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaagcc 330382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 22370758 - 22370599
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||| |||||| |||||||||| |||| || ||| ||||||||||||||||||||       ||||||||||| ||||||||||||| | |||    
T  22370758 actaaaactgttatttctgtgcgtttctggagttggagataaggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgtttggttt 22370659  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||| |||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  22370658 aaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 51828701 - 51828539
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| |||||||||||||||||||||||||||       ||||||||||| |||||||||||||||||||    
T  51828701 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttacggacgattttgttcgattt 51828602  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || || ||||| |||||| | |||||||||||   |||||||||||||||||||||||    
T  51828601 aaaagaggtaagaccaatttcgtaatttggtcaaaatgcaaggaccaaaagtgtaattaagcc 51828539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 329977 - 329840
Alignment:
Q  31 agttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 130  Q
    |||| |||| ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  329977 agttggaaacagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagttaggaccattttcgtgagttgg 329879  T
Q  131 tcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||||||| | || |||||||||||||||| |||||||||    
T  329878 tcaaaatggaagaaccaaaagtgtaattatgccaaaaaa 329840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 51828118 - 51827957
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| ||||  |||||||||||||||||||||| |||       ||||||||||| |||||||||||||||||||    
T  51828118 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaaatgcaaaaaa-catatagtttagggacgattttgttcgattt 51828020  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  51828019 aaaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 51827957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 52375716 - 52375877
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||||  ||| ||||||||||||       ||||||||||| |||||||||||||| ||||    
T  52375716 actaaaactgtcatttctgtgcgtttctggagttggaaataggggaatatgactaaaactgcaaaaaa-catatagtttatggacgattttgttcaattt 52375814  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  52375815 aaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcc 52375877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 49720532 - 49720371
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| ||||||||||| ||||||||||||||||||||       | |||| |||| |||||||||||||||||||    
T  49720532 actaaaactgtcatttatgtgcgtttctggagttagaaataaggagataggactaaaactgcaaaaaa-cgtatactttagggacgattttgttcgattt 49720434  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||| ||||||||||||||||||||   |||| ||||||||||||||||||    
T  49720433 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcc 49720371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 70 - 169
Target Start/End: Complemental strand, 14654292 - 14654193
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||| |||||    
T  14654292 catatagtttaaagacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtagtatcaaaagtgtaattaagcctaaaaa 14654193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 40275479 - 40275642
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| ||||||||| |||| ||||||||||||       |||||||||||  ||||||||||||||||||    
T  40275479 actaaaactgtcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaa-catatagtttagagacgattttgttcgattt 40275577  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaa 166  Q
    |||| || ||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||    
T  40275578 aaaagaggtaggaccattt-cgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagccaaa 40275642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 55389982 - 55390154
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| ||||||| || |||| ||||||||||| ||||||||||||| |       |||||||||||  |||||||||||| |||||    
T  55389982 actaaaactgtcatttctgtgcgtttatggagttggaaatagggaggtaggactaaaactacaaaaaa-catatagtttagtgacgattttgtttgattt 55390080  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc-aaaaaatatt 173  Q
    ||||||| ||||||||||||||||| ||||| |||||   ||||||||||||||||||||||| ||||||||||    
T  55390081 aaaaaaggtaggaccattttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaagcctaaaaaatatt 55390154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 25535052 - 25534890
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaagg-acgattttgttcgatt 99  Q
    |||||||||||||||| | |||||||||| |||| |||||||||||||||||||||||||||       |||||| |||| || ||||||||||||||||    
T  25535052 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catataatttaggggacgattttgttcgatt 25534954  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||| || ||||||||||||| ||| |||||||||||   |||||||||||||||||||||||    
T  25534953 taaaagaggtaggaccattttcatgaattggtcaaaatgcgaggaccaaaagtgtaattaagcc 25534890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 40838813 - 40838655
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| ||||||||| |||| ||||||||||||       ||||||||||| ||||||||||||| |||||    
T  40838813 actaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaa-catatagtttatggacgattttgtttgattt 40838715  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||| || || ||||||||||||||||||||||||||   |||| |||||||||||||||    
T  40838714 aaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggatcaaaagtgtaattaa 40838655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 49951931 - 49952096
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| ||||  ||||||||||||| ||||||||||||       ||| |||||||| ||||||||||||||||||    
T  49951931 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaa-catgtagtttaatgacgattttgttcgattt 49952029  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaa 167  Q
    |||| || || ||||| ||||||||||||||||||||   |||||||||| ||||||||||||||||    
T  49952030 aaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagccaaaa 49952096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 14654576 - 14654735
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| |||||| ||||||||||||||||||||        | |||||||| |||||||||||||||||||    
T  14654576 actaaaactgtcatttatgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaa---acatagtttacggacgattttgttcgattt 14654672  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||  ||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  14654673 aaaagaggtagagccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 14654735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 34104798 - 34104638
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||| |||||||| | |||||||||| || | |||||||| ||||| ||||||||||||       |||||||||||| ||||||||||||| ||||    
T  34104798 actaaaaatgtcatttttgtgcgtttctggagctggaaatagg-agatatgactaaaactgcaaaaaa-catatagtttaatgacgattttgttcaattt 34104701  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||| ||||||||||||||||||||||||| |||| || ||||||||||| |||||    
T  34104700 aaaaaagatagaaccattttcgtgagttggtcaaaatggtagaacaaaaagtgtaatgaagcc 34104638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 44676633 - 44676468
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||  |||| |||||||||||||||||||||| ||||       ||||||||||| ||||| |||||||||||||    
T  44676633 actaaaactgtcatttctgtgcgtttcttgagttggaaatagggagataggactaaagctgcaaaaaa-catatagtttagggacggttttgttcgattt 44676535  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaa 167  Q
    |||| || || || || |||| |||||| ||||||||   |||||||||||||||||||||||||||    
T  44676534 aaaagaggtatgatcaatttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaagccaaaa 44676468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 52236977 - 52236818
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| ||||  |||||||| |||| ||||||||||||       ||||||||||| |||||||||||||||||||    
T  52236977 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggggatatgactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 52236879  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||| || || |||||||||||||| ||| |||||||   ||||| |||||||||||||||    
T  52236878 aaaagaggtatgaccattttcgtgaattgttcaaaatgcgaggactaaaagtgtaattaag 52236818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 34105033 - 34105190
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn-catatagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||||| |||||||||| |||| |||||| |||||| |||||||||||||        ||||||||||| ||||||||||||||||||    
T  34105033 actaaaactgtcatttctgtgcgtttctgaagttggaaataaggagatgggactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatt 34105132  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaat 157  Q
    ||||| ||  |||||||  ||||| |||||||||||||   |||||||||||||||||    
T  34105133 taaaagagggaggaccaacttcgtaagttggtcaaaatgcaaggaccaaaagtgtaat 34105190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 38535680 - 38535841
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||| |||| | |||||||||| |||| |||||||||||||||||||||||||||       ||||||||||| |||||||||| ||||||||    
T  38535680 actaaaactgtaatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttattcgattt 38535778  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| |||| |||| | |||||| |||||||||||||    ||||||||||| ||||||||||    
T  38535779 aaaagagatcggactaatttcgtaagttggtcaaaatgcacggaccaaaagtataattaagcc 38535841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 46013583 - 46013422
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||| ||||||| | |||||||||| ||||  ||||||||||||| ||||||||||||       |||||| |||| |||||||||||||||||||    
T  46013583 actaaaaccgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaa-catatactttagggacgattttgttcgattt 46013485  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || || ||||| ||||||||||||||||||||   |||| ||||||||||||||||||    
T  46013484 aaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcc 46013422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 32730550 - 32730392
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||  |||| |||||||||||||| || |||||||||       ||||||||||| |||||||||||||| ||||    
T  32730550 actaaaactgtcatttatgtgcgtttctagagttggaaatagggagatacgattaaaactgcaaaaaa-catatagtttagggacgattttgttcaattt 32730452  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||| || |||||||| ||||  ||||||||||||||   ||||||||||||||||||||    
T  32730451 aaaagaggtaggaccaatttcaagagttggtcaaaatgcaaggaccaaaagtgtaattaa 32730392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 43678669 - 43678831
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||  |||| |||||||| ||||| |||| |||||||       ||||||||||| |||||||||||||||||||    
T  43678669 actaaaactgtcatttatgtgcgtttctagagttggaaataggaagatatgactgaaactgcaaaaaa-catatagtttatggacgattttgttcgattt 43678767  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    |||| || | ||||||  ||||||||||| |||||||   ||||||||||||||||||||||||    
T  43678768 aaaagaggttggaccaagttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagcca 43678831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 51473016 - 51472855
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| ||||||| || |||| |||||||||||||||||||||||||||       |||||| |||| |||| |||||||| |||||    
T  51473016 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgc-aaaaaacatatactttagggacaattttgtttgattt 51472918  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||  | |||| |||||||||||||||   |||||||||||| ||||||||||    
T  51472917 aaaagaggtaggaaaaatttcatgagttggtcaaaatgcaaggaccaaaagtataattaagcc 51472855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 16689484 - 16689361
Alignment:
Q  36 gaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaa 135  Q
    ||||||||| |||||||||||||||||       |||||| |||| ||||||||||||||||||||||| || |||||||| ||||||||||||||||||    
T  16689484 gaaatagggtgataggactaaaactgcaaaaaa-catatattttatggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaa 16689386  T
Q  136 atagtaggaccaaaagtgtaattaa 160  Q
    ||  ||||||||||| |||||||||    
T  16689385 atgctaggaccaaaactgtaattaa 16689361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 2044432 - 2044271
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||| |||| | |||||||||  |||| |||||||||||||| |||||||||| |       |||||| |||| |||||||||||||||||||    
T  2044432 actaaaactgttatttatgtgcgtttcttgagttggaaatagggagatatgactaaaact-ccaaaaaacatataatttatggacgattttgttcgattt 2044334  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || || |||||||||| |||||||||||||||   || |||||||||| |||||||||    
T  2044333 aaaagaggtatgaccattttcatgagttggtcaaaatgcgagaaccaaaagtgaaattaagcc 2044271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 163
Target Start/End: Original strand, 41998650 - 41998774
Alignment:
Q  37 aaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaa 136  Q
    |||||||||| |||||||||||||||       ||||||||| | ||||||||||||||||||||||| || |||||||| |||||| ||||||||||||    
T  41998650 aaatagggag-taggactaaaactgcaaaaaaacatatagtt-agggacgattttgttcgatttaaaagaggtaggaccaatttcgtaagttggtcaaaa 41998747  T
Q  137 tagtaggaccaaaagtgtaattaagcc 163  Q
    |   |||||||||||||||||||||||    
T  41998748 tgcaaggaccaaaagtgtaattaagcc 41998774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 39010482 - 39010554
Alignment:
Q  78 ttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaa 150  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | |||| |||||    
T  39010482 ttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagctggtcaaaatggcaggatcaaaa 39010554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 70 - 169
Target Start/End: Complemental strand, 43222483 - 43222384
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||||||||||| ||||||||||||||||||||||| ||| |  || ||||||||||||||||||||||   | ||||||||  |||||||||||||||||    
T  43222483 catatagtttagggacgattttgttcgatttaaaagagacataactattttcgtgagttggtcaaaatgtgatgaccaaaaacgtaattaagccaaaaaa 43222384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 36701482 - 36701640
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattta 101  Q
    ||||||||| |||||||||| ||||||| ||||  ||||||| || || ||||||||||||          |||||||| ||| |||||||||||||||     
T  36701482 ctaaaactgccatttctatgtgtttctggagttgaaaatagg-aggtatgactaaaactgcaaaaaacatgatagtttagggatgattttgttcgatttg 36701580  T
Q  102 aaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    ||| ||| | ||||||||||||||| ||||||||||   |||||||||||||||||||||    
T  36701581 aaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaag 36701640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 43222774 - 43222935
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagtt-agaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||| | |||||||||| |||| | |||||||| | | |||||||||||||       |||| |||||| ||||||||||||||||||    
T  43222774 actaaaactgtcatttttgtgcgtttctggagttgaaaaataggggg-tgggactaaaactgcaaaaaaacataaagtttagggacgattttgttcgatt 43222872  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    ||||| ||  | ||||||||||||| | | ||||||||   |||||||||||||| |||||||    
T  43222873 taaaagaggcatgaccattttcgtgcgcttgtcaaaatgcgaggaccaaaagtgtgattaagc 43222935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 163
Target Start/End: Original strand, 33412609 - 33412700
Alignment:
Q  72 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||| ||||||||||||||||||  ||| ||| || |||||||||||||| || |||||||   |||||||||||||||||||||||    
T  33412609 tatagtttagggacgattttgttcgattcgaaagagacagaaccattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaattaagcc 33412700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 36701196 - 36701106
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||| ||||||||||||||||||| ||| ||  | || ||||||||||||||| |||||||   |||||||||||||||||||||||    
T  36701196 atagtttatggacgattttgttcgatttgaaagaggcatgatcattttcgtgagttgatcaaaatgcgaggaccaaaagtgtaattaagcc 36701106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 55192277 - 55192115
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattta 101  Q
    ||||||||||||||||| |||||||||| ||||  ||||||| || ||||||||||||| |       ||||||||||| ||||| ||||||| |||||     
T  55192277 ctaaaactgtcatttctctgcgtttctggagttgaaaatagg-aggtaggactaaaactacaaaaaa-catatagtttatggacggttttgtttgatttg 55192180  T
Q  102 aaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaa 166  Q
    ||| ||    ||||||||||||||| ||||||||||    |||| ||||||||||||||||||||    
T  55192179 aaagaggcgagaccattttcgtgagctggtcaaaatgcggggactaaaagtgtaattaagccaaa 55192115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 37075848 - 37075687
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn--catatagtttaaggacgattttgttcgatt 99  Q
    ||||||| ||||||||| |||||||||| ||||  ||||| | || |||||||||||||||         ||||||||||| |||||  |||||| ||||    
T  37075848 ctaaaacggtcatttctctgcgtttctggagttgaaaataag-aggtaggactaaaactgcaaaaaaaaacatatagtttagggacgggtttgtttgatt 37075750  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    | ||| ||  ||||||||||||||||||||||||||||     ||||||||||||||||||||    
T  37075749 tgaaagaggcaggaccattttcgtgagttggtcaaaatgcggagaccaaaagtgtaattaagc 37075687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 39010168 - 39010075
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| |||||||| || |||||||||||||||||| || || || || ||| ||||||||||||||||   |||||||||| ||||||||||||    
T  39010168 catacagtttaagaacaattttgttcgatttaaaagaggtatgagcaattttgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcc 39010075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 49407889 - 49407796
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| |||||| ||||| |||||||| |||| ||| ||  | ||||||||||||||| ||||||||||   |||||||||||||||||||||||    
T  49407889 cataaagtttagggacggttttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcc 49407796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 50900980 - 50901073
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||| ||||| |||||||||||||  || ||  ||| ||||||| ||||| ||||||||||   |||||||||||||||||||||||    
T  50900980 catatagtttagggacggttttgttcgatttgtaagaggcagggccatttttgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcc 50901073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 27200078 - 27200237
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattta 101  Q
    ||||| ||||||||||| |||||||||| ||||  ||||||| || || ||||||||||||          |||||||| ||||| | |||||||||||     
T  27200078 ctaaacctgtcatttctctgcgtttctggagttgaaaatagg-aggtatgactaaaactgcaaaaaacatgatagttta-ggacggtattgttcgatttg 27200175  T
Q  102 aaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||| ||  || |||||||||||||| ||||||||||   |||||||||||||||||||||||    
T  27200176 aaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcc 27200237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 27199795 - 27199705
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||||  |||| ||||||||||||| ||| ||  | ||||||||||||||| ||||||||||   |||||||||| |||||||||    
T  27199795 catatagtttagtgacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaaatgtaattaa 27199705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 49408169 - 49408326
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncat-atagtttaaggacgattttgttcgattt 100  Q
    ||||||||| ||||||| |||||||||| ||||  ||||   ||| |||||||||||||||       ||| |||||||| ||||  |||||||||||||    
T  49408169 ctaaaactgccatttctttgcgtttctggagttgaaaat---gaggtaggactaaaactgcaaaaaaacatgatagttta-ggacagttttgttcgattt 49408264  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
     ||| ||| |  |||||||||||||| ||||||||||   || |||||||||||||||||||    
T  49408265 gaaagagacacaaccattttcgtgagatggtcaaaatgcgagtaccaaaagtgtaattaagc 49408326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 30104535 - 30104474
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaata 171  Q
    ||||||| |||||||||| |||||||| |  ||||||||||||||||||||||| |||||||    
T  30104535 aggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaaaaata 30104474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 37076138 - 37076219
Alignment:
Q  81 aggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    |||||||||||||||||||| ||| ||   |||||||||||||||| || |||||||   |||||||||| |||||||||||    
T  37076138 aggacgattttgttcgatttgaaagaggcgggaccattttcgtgagctgatcaaaatgcgaggaccaaaaatgtaattaagc 37076219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 5137365 - 5137526
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattta 101  Q
    ||||||||||||||||| |||||||||| |||| ||||   |||||||||||||||| |||          ||| || |||||| ||||||||| ||||     
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 5137464  T
Q  102 aaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| |  || |||| |||| ||||| || ||||| |  |||||||||||||||||||||||    
T  5137465 aaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5137526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 50900614 - 50900534
Alignment:
Q  81 aggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||| ||||||||||||| ||| || |||||||||||||||||| || |||||||   | |||||||||| ||||||||    
T  50900614 aggacggttttgttcgatttgaaagagttaggaccattttcgtgagctgatcaaaatttgaagaccaaaagtttaattaag 50900534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 20840635 - 20840560
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||| |||| ||||||  ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  20840635 ttttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 20840560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 32535455 - 32535514
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||||||||    
T  32535455 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaaaaa 32535514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 37727422 - 37727481
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||||||||    
T  37727422 aggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagccaaaaaa 37727481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 167
Target Start/End: Original strand, 39556039 - 39556126
Alignment:
Q  80 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaa 167  Q
    |||||| |||||||||  ||| |||| |  ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||||||    
T  39556039 aaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaaa 39556126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 8874139 - 8874205
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaa 136  Q
    ||||||||||| ||| | ||||||||||||||||| |   ||||||||||||||||| |||||||||    
T  8874139 catatagtttagggaaggttttgttcgatttaaaagaagcaggaccattttcgtgagctggtcaaaa 8874205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 23644515 - 23644462
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || |||||||  |||||||||||||||||||||||    
T  23644515 aggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 23644462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 177
Target Start/End: Original strand, 25612447 - 25612536
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaatattagtt 177  Q
    |||||||| |||| |||| |  ||||||| |||||||||| |||||||| |  |||||||||||||||||||| || || |||| |||||    
T  25612447 ttttgttctattttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaaacccaataataatagtt 25612536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 29801908 - 29801972
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaatatta 174  Q
    ||||||| |||||||||| || |||||||  |||| |||||||||||||||||| ||| ||||||    
T  29801908 aggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagcctaaatatatta 29801972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 24301048 - 24301107
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||||||| |||||||||| || ||||| |  ||||||||||||||||||||||| |||||    
T  24301048 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaaa 24301107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 39555661 - 39555578
Alignment:
Q  80 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| |||||||||  ||| |||| |  ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  39555661 aaggaccattttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39555578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 8873850 - 8873694
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncat-atagtttaaggacgattttgttcgattt 100  Q
    ||||||||||||||||| |||||||||| ||||  ||||| |||| || ||||||||||||       ||| |||| || | |||| |||||||||||||    
T  8873850 ctaaaactgtcatttctctgcgtttctgaagttgaaaata-ggaggtaagactaaaactgcaaaaaaacatgataggtt-atgacggttttgttcgattt 8873753  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||| ||| | |||||||||||| |  || |||||||   |||||||||| |||||||||    
T  8873752 aaaagagacatgaccattttcgtaaactgatcaaaatgcgaggaccaaaa-tgtaattaa 8873694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 12141162 - 12141239
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    ||||||||||||| ||| || ||||||||||| |||||  || | |||||   |||| ||||||||||||||||||||    
T  12141162 ttttgttcgatttgaaagaggtaggaccatttacgtgatctgataaaaatgcgaggaacaaaagtgtaattaagccaa 12141239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 23644935 - 23645016
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||||||||  ||| |||| | |||||||| |||||||||| || ||||| |  |||||||||||| |||||||||| |||||    
T  23644935 ttttgttctgttttaaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagccgaaaaa 23645016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 27393714 - 27393661
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| ||| |||||| |||||||| |  |||||||||||||||||||||||    
T  27393714 aggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 27393661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 31779144 - 31779197
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  31779144 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 31779197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 5137031 - 5136983
Alignment:
Q  112 gaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||| ||||||||||||| ||||| |  ||||||||||||||||||||    
T  5137031 gaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaa 5136983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 25853285 - 25853233
Alignment:
Q  112 gaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    ||||| |||||||||| || ||||| |  ||||||||||||||||||||||||    
T  25853285 gaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcca 25853233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 37847206 - 37847265
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgc 62  Q
    |||||| |||||||||| ||| |||||| ||||  ||||||| ||||||||||||||||||    
T  37847206 ctaaaattgtcatttctctgcatttctgaagttgaaaatagg-agataggactaaaactgc 37847265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 43973489 - 43973441
Alignment:
Q  115 cattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||||| || ||||| |  |||||||||||||||||||||||    
T  43973489 cattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 2e-58; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 25472397 - 25472560
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| || | |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  25472397 actaaaactgtcatttctgtgcgtttctggagctggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 25472496  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    |||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  25472497 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaagcca 25472560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5114629 - 5114468
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| || ||||||| |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  5114629 actaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 5114531  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||||||    
T  5114530 aaaaaagataggaccattttcgtgagttgatcaaaatggtaggatcaaaaatgtaattaagcc 5114468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 30251076 - 30251243
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||| ||||||||||| |||||||||| |||| |||||||||||||| |||||||||| |       || ||||||||||||||||||||||||||||    
T  30251076 actaaatctgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactacaaaaatacaaatagtttaaggacgattttgttcgattt 30251175  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  30251176 aaaaaagatatgacaatttttgtgagttggtcaaaatagtaggatcaaaagtgtaattaagcctaaaa 30251243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 31573886 - 31573714
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn---catatagtttaaggacgattttgttcga 97  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||          ||||||||||||| ||||||||||||||    
T  31573886 actaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaaaacatatagtttaagaacgattttgttcga 31573787  T
Q  98 tttaaaaaaga-taggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||||||||| | |||||| |||||||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  31573786 tttaaaaaaaaataggactattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagcctaaaaa 31573714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 24640570 - 24640728
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||| ||||||||||||| |||||||  | |||| |||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||    
T  24640570 actagaactgtcatttctgtgcgttttcggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 24640668  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||    
T  24640669 aaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtataattaa 24640728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 31073527 - 31073694
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||       ||||||||||| |||| ||||||||||||||    
T  31073527 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcacaaaa-catatagtttagggacaattttgttcgattt 31073625  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||| || || ||||| ||||||||| ||||||||||   |||||||||||||||||||||||| ||||    
T  31073626 aaaagaggtatgaccaatttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagccataaaa 31073694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 5120856 - 5121020
Alignment:
Q  3 taaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaa 102  Q
    |||||||||||||||| ||||||| || |||| |||||||||||||||||||||||||||       ||||||||||| |||||||||||||||||||||    
T  5120856 taaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaa 5120954  T
Q  103 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    || || |||||  | ||||||||||||||||||||   ||||||||||||||||||||||| ||||    
T  5120955 aagaggtaggaataatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctaaaa 5121020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 25469010 - 25468852
Alignment:
Q  3 taaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn-catatagtttaaggacgattttgttcgattta 101  Q
    |||||||||||||||| |||||||||| | ||  ||||||||||||||||||||||||||        ||||||||||| ||||||||||||||||||||    
T  25469010 taaaactgtcatttctgtgcgtttctggaatttaaaatagggagataggactaaaactgcaagaaaaacatatagtttagggacgattttgttcgattta 25468911  T
Q  102 aaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||| ||||| ||||| ||||||||||||||||||||   ||||||||||||||||||||    
T  25468910 aaagagatatgaccaatttcgtgagttggtcaaaatgtaaggaccaaaagtgtaattaa 25468852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 29891465 - 29891630
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||| |||||||| |||||||||| |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||| ||||    
T  29891465 actaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcaattt 29891563  T
Q  101 aaaaaag----ataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||| ||     | ||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  29891564 aaataaataaaaaaggaccattttcacgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 29891630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 31574110 - 31574271
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||| |||||||| | |||||||||| ||||  ||||||||||||| ||||||||||||       ||||||||||| |||||||||||||||||||    
T  31574110 actaaaattgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 31574208  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || || ||| | ||||||||||||||||||||   |||||||||||||||||||||||    
T  31574209 aaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 31574271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 164
Target Start/End: Complemental strand, 31073290 - 31073142
Alignment:
Q  22 cgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggac------gattttgttcgatttaaaaaagataggacc 115  Q
    |||||||| |||| |||||||| ||||| ||||||||||||        |||||||||||||||      ||||||||||||||||||||||||||||||    
T  31073290 cgtttctggagttggaaataggaagatatgactaaaactgcaaaaaataatatagtttaaggacttaaacgattttgttcgatttaaaaaagataggacc 31073191  T
Q  116 attttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    |||||| || ||||||||||||   ||||||||||||||||||||||||    
T  31073190 attttcatgtgttggtcaaaattaaaggaccaaaagtgtaattaagcca 31073142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 28636422 - 28636290
Alignment:
Q  31 agttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 130  Q
    |||| |||||||||||||| ||||||||||||       ||||||||||| | ||||||||||||||||||||| |  || ||||| |||||||||||||    
T  28636422 agttggaaatagggagatatgactaaaactgcaaaaa--catatagtttaggaacgattttgttcgatttaaaagaagtaagaccaatttcgtgagttgg 28636325  T
Q  131 tcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    ||||||||  | |||||||| ||||||||||||||    
T  28636324 tcaaaatacaatgaccaaaaatgtaattaagccaa 28636290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 29891241 - 29891080
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| ||||||||||||||| | ||||| ||        ||||||||||| ||||| ||||||||| |||    
T  29891241 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatagaattaaaattg-taaaaaacatatagtttagggacgcttttgttcggttt 29891143  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || || || || |||||| |||| ||||||||   |||| ||||||||||||||||||    
T  29891142 aaaagaggtatgatcaatttcgtaagttagtcaaaatgtaaggaacaaaagtgtaattaagcc 29891080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 35163572 - 35163733
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn-catatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||||||||| || |||| || ||||  ||||||| || |||||||||||||||        ||||||||||| ||||||||||||| |||||    
T  35163572 ctaaaactgtcatttctctgtgtttttggagttgaaaatagg-aggtaggactaaaactgcaaaaaaaacatatagtttagggacgattttgtttgattt 35163670  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
     ||| ||  || |||||||||||||| ||||||||||    ||||||||||||||||||||||    
T  35163671 gaaagaggcagaaccattttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaagcc 35163733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 22534217 - 22534273
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaa 166  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  22534217 aggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagccaaa 22534273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 32836383 - 32836547
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattta 101  Q
    |||||||||| |||||| | |||||||| ||||  ||||||  || |||||||||||||||       |||| |||||||| ||| |||||||||||||     
T  32836383 ctaaaactgttatttctcttcgtttctgaagttgaaaataga-aggtaggactaaaactgcaaaaaa-catacagtttaagaacggttttgttcgatttg 32836480  T
Q  102 aaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    ||| ||  | ||||||||||||||| ||||||||||   ||||| ||||||||||||||||||||||    
T  32836481 aaagaggcatgaccattttcgtgagctggtcaaaatgcaaggactaaaagtgtaattaagccaaaaa 32836547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 28636581 - 28636669
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattt 90  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||||       |||||||||||||||||||||    
T  28636581 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactgc-aaaaaacatatagtttaaggacgattt 28636669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30250852 - 30250791
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgc 62  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||  |||||||| ||||    
T  30250852 actaaaactgtcatttctgtgcgtttctgtagttggaaatagggagaatggactaaagctgc 30250791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 31242878 - 31242795
Alignment:
Q  91 tgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaatatta 174  Q
    |||||||||||||||||  |||| |||||||||||||||||||||||   |||  ||||||||||||||| || ||| ||||||    
T  31242878 tgttcgatttaaaaaaggcaggatcattttcgtgagttggtcaaaatgcgagggtcaaaagtgtaattaaacctaaatatatta 31242795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 10900424 - 10900481
Alignment:
Q  112 gaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||||| |||||||||| || |||||||  |||||||||||||||||||||||||||||    
T  10900424 gaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccaaaaaa 10900481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 35163266 - 35163187
Alignment:
Q  81 aggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||| ||||||||||||| ||| ||| | ||||||||| ||||| ||||||||||   ||||| ||||||||||||||    
T  35163266 aggacggttttgttcgatttgaaagagacaagaccatttttgtgagctggtcaaaatgcgaggactaaaagtgtaattaa 35163187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 30250775 - 30250717
Alignment:
Q  109 taggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaa 167  Q
    |||||||| ||||||||||||||||||||   |||||||||| ||||||||||| ||||    
T  30250775 taggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagcaaaaa 30250717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 28472690 - 28472637
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| ||||||||||||| ||||| |  |||||||||||||||||||||||    
T  28472690 aggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcc 28472637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 29859879 - 29859826
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| ||||||||||||| ||||| |  |||||||||||||||||||||||    
T  29859879 aggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcc 29859826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 3835188 - 3835268
Alignment:
Q  80 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||| |||||||||  ||| ||| ||  |||||||||||||||||| |||||||| |   |||||||||||||||||||    
T  3835188 aaggacaattttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaaaacacatggaccaaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 170
Target Start/End: Original strand, 835695 - 835778
Alignment:
Q  87 attttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaat 170  Q
    |||||||||||||| ||| ||  |||||||||||||| || || | |||||   ||||||||||||| ||||||||| ||||||    
T  835695 attttgttcgatttgaaagaggcaggaccattttcgtaagctgctaaaaatgcgaggaccaaaagtgcaattaagcctaaaaat 835778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 11445457 - 11445532
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||  ||| ||||||  ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  11445457 ttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11445532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 18257629 - 18257684
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    ||||||| |||||||||| |||||||| |  |||||||||||| ||||||||||||    
T  18257629 aggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtataattaagccaa 18257684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 18297662 - 18297733
Alignment:
Q  90 ttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||| |||||||||||| | ||||| |||||||||||||| |||||   | ||| |||||||||||||||    
T  18297662 ttgttcaatttaaaaaagagatgaccaatttcgtgagttggttaaaattcgaagactaaaagtgtaattaag 18297733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 20741183 - 20741100
Alignment:
Q  80 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| |||||||||  ||| |||| |  ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  20741183 aaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 20741100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 23074074 - 23073999
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||| |||| |||| |  ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  23074074 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 23073999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 32836089 - 32836010
Alignment:
Q  81 aggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||| ||||||||||||| ||| ||  |||||| |||| ||||| ||||||||||   |||| |||||||||||||||    
T  32836089 aggacggttttgttcgatttgaaagaggcaggaccgtttttgtgagctggtcaaaatgcaaggatcaaaagtgtaattaa 32836010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 835484 - 835394
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||| ||||  ||||||||||||| ||| ||  | ||||||||||||||| || | |||||   ||||||||||||| |||||||||    
T  835484 atagtttagggacagttttgttcgatttgaaagaggcaagaccattttcgtgagctgctaaaaatgtgaggaccaaaagtgcaattaagcc 835394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 4811423 - 4811370
Alignment:
Q  112 gaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    ||||| |||||||||| |  ||||||| | ||||||||||||||||||||||||    
T  4811423 gaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagccaa 4811370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 11277074 - 11277131
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaa 167  Q
    ||||||| ||||||||||  | ||||| |  |||||||||||||||||||||||||||    
T  11277074 aggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagccaaaa 11277131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 12935210 - 12935157
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  12935210 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 12935157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 22219845 - 22219898
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  22219845 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 22219898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 33096082 - 33096163
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||||||||||||| ||| ||| | |||||||||| |||| |||| |||||   | || |||||||| |||||||||||||||    
T  33096082 ttttgttcgatttgaaagagacatgaccattttcatgagctggtaaaaatgcgaagaacaaaagtgcaattaagccaaaaaa 33096163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 18504994 - 18504922
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||  ||| ||||||  ||||||| |||||||||| || ||||| |  ||||||||||||||||||||    
T  18504994 ttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 33095804 - 33095716
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||||| ||||| ||||||||||||| ||| || |  ||||||||||| ||| || | |||||   ||||||||||||| |||||||    
T  33095804 atagtttagggacggttttgttcgatttgaaagaggtgagaccattttcgcgagctgataaaaatgcgaggaccaaaagtgcaattaag 33095716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 6e-55; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 34555765 - 34555926
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn-catatagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||||        ||||||||||||||||||||||||||||||    
T  34555765 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaaacatatagtttaaggacgattttgttcgatt 34555864  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  34555865 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaag 34555926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 9992316 - 9992154
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| || ||||||| |||| |||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||    
T  9992316 actaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggaccattttgttcgattt 9992218  T
Q  101 aaaaaagataggaccattttcgtgagttggtc-aaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  9992217 aaaaaagataggaccatttccgtgagttggtcaaaaatggtaggaccaaaagtgtaattaagcc 9992154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 37505229 - 37505067
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| | | ||| || ||||  ||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||||    
T  37505229 actaaaactgtcatttctgttcatttttggagttgaaaatagggaaataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 37505130  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37505129 aaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 37505067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 10278935 - 10279094
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| || ||||||| |||| || ||| |||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  10278935 actaaaactgtcatttctgtgtgtttctggagttggatatatggagataggactaaaactg----aaaacatatagtttaaggacgattttgttcgattt 10279030  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    ||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  10279031 aaaaaagataggaccattttcgtgagttggtcaaaacggtaggatcaaaagtgtaattaagcca 10279094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 21938724 - 21938566
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| ||||||| || |||| |||||||||||||||||||||||||||       ||||||||||| |||||||||||||||||||    
T  21938724 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttatggacgattttgttcgattt 21938626  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||| || ||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  21938625 aaaaaagataagatcattttcgtgagttgatcaaaatggtaagaccaaaagtgtaattaa 21938566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 9992542 - 9992703
Alignment:
Q  3 taaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaa 102  Q
    ||||||||||||||||| ||||||||| ||||  |||||||||||||||||||| |||||       ||||||||||||| |||||||||||||||||||    
T  9992542 taaaactgtcatttctacgcgtttctggagttgaaaatagggagataggactaatactgcaaaaaa-catatagtttaagcacgattttgttcgatttaa 9992640  T
Q  103 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    ||||||||||||||||||| |||||| ||||||||   |||||||||||||||||||||||||    
T  9992641 aaaagataggaccattttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaagccaa 9992703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 44954611 - 44954771
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||       ||||||||||| ||| ||||||||| |||||    
T  44954611 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttatggatgattttgtttgattt 44954709  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    ||||||| || || ||||||| |||||||||||||||   ||||||||||||||||||||||    
T  44954710 aaaaaaggtatgatcattttcatgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 44954771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 16299067 - 16299232
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||| |||||||||| |||||||||| |||| |||||| ||||||||||||||||||||       |||||||||||||||||||||||||| |||     
T  16299067 actaaaattgtcatttctgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcaatta 16299165  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    |||||| ||||||||||||||| |||||| ||||||| ||||||| |||||| |||||||||| ||||    
T  16299166 aaaaaa-ataggaccattttcgcgagttgatcaaaatggtaggacaaaaagtataattaagcctaaaa 16299232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 17641749 - 17641912
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncata----tagtttaaggacgattttgttcg 96  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||        |||    ||||||| |||||||||||||||    
T  17641749 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaaataaaaatagtttagggacgattttgttcg 17641848  T
Q  97 atttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||| || || ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  17641849 atttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 17641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 30786933 - 30786771
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||| ||||||||| ||||||| || |||| |||||||||||||||||||||||||||       ||||||||||| |||||||||||||||||||    
T  30786933 actaaaaccgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 30786835  T
Q  101 aaaaaagataggacc-attttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || ||||||| ||||||||||||||||||||||   || ||||||||||||||||||||    
T  30786834 aaaagaggtaggaccaattttcgtgagttggtcaaaatgcaagaaccaaaagtgtaattaagcc 30786771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 50305169 - 50305337
Alignment:
Q  3 taaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatat--agtttaaggacgattttgttcgattt 100  Q
    |||||||||||||| | || |||| || ||||  ||||||||||||| ||||||||||||        ||||  ||||||||||||||||||||||||||    
T  50305169 taaaactgtcatttatgtgtgtttatggagttgaaaatagggagatatgactaaaactgcaaaaaaaaatatatagtttaaggacgattttgttcgattt 50305268  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||||||||||||||||||||| ||||||||| ||||| |||| ||||||||||||||||| ||||||||    
T  50305269 aaaaaagataggaccattttcatgagttggttaaaatggtagaaccaaaagtgtaattaaaccaaaaaa 50305337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 10278710 - 10278550
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||| |||||||| | |||||||||| ||||  |||| |||||||||||||||||||||       ||||||||||| |||||||||||||||||||    
T  10278710 actaaaattgtcatttatgtgcgtttctggagttgcaaatggggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 10278611  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||| || ||||| || ||||||||||||||||||||   |||||||||||||||||||||    
T  10278610 aaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 10278550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 52335895 - 52336056
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| |||||||||||||| ||||||||||||        |||||||||| |||||||||||||||||||    
T  52335895 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaa-atatagtttagggacgattttgttcgattt 52335993  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||| |||| |||||||||||||||  ||| |||||||| |||||||||||    
T  52335994 aaaagaggtaggaccaatttcatgagttggtcaaaatgatagaaccaaaagagtaattaagcc 52336056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 34555542 - 34555379
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn-catatagtttaaggacgattttgttcgatt 99  Q
    ||||||||| |||||||| |||||||||| |||| ||||||||||||||||||||||||||         ||||||||||| ||||||||||||||||||    
T  34555542 actaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaaaaacatatagtttagggacgattttgttcgatt 34555443  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||| || ||| |||| ||||| ||||| ||||||||   |||||||||||||||||||||||    
T  34555442 taaaagaggtagcaccaatttcgcgagttagtcaaaatgcaaggaccaaaagtgtaattaagcc 34555379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 37505453 - 37505619
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||||||| || ||||  ||||||||||||||||||||||||||       ||||||||||| ||||||||||||| | |||    
T  37505453 actaaaactgtcatttttgtgcgtttttggagttgaaaatagggagataggactaaaactgcaaaaa--catatagtttatggacgattttgtttgtttt 37505550  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||| ||||| || || |||||||||||||||||||||  |||||||||| | ||||||||||||||||    
T  37505551 aaaagagatatgatcaatttcgtgagttggtcaaaataaaaggaccaaaaatataattaagccaaaaaa 37505619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 8229801 - 8229632
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgc--nnnnnnncatatagtttaaggacgattttgttcgat 98  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||         |||||||||||  ||||||||| ||||||    
T  8229801 actaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaaaacatatagtttagagacgattttattcgat 8229702  T
Q  99 ttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    |||||| |  ||| | ||||||||||||||| |||||||   |||| |||||||||||||||||| ||||    
T  8229701 ttaaaagatgtagaatcattttcgtgagttgatcaaaatgtgaggatcaaaagtgtaattaagcctaaaa 8229632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 23340344 - 23340179
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||||||||||  ||||||||| |||| |||||| ||||||| ||||||||||||        |||||||||| |  ||||||||||||||||    
T  23340344 actaaaactgtcatttctgagcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaat-atatagtttatgagcgattttgttcgattt 23340246  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaa 167  Q
    |||| ||||||||||| ||||||||||||||||||||   | || ||||||||||||||||||||||    
T  23340245 aaaagagataggaccaatttcgtgagttggtcaaaatgcaatgatcaaaagtgtaattaagccaaaa 23340179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 1837666 - 1837505
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| ||||  ||||||||||||| ||||||||||||       ||||||||||| |||| ||||||||||||||    
T  1837666 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaa-catatagtttagggacaattttgttcgattt 1837568  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| ||||| || || |||||||||||| |||||||   |||||||||||||||||||||||    
T  1837567 aaaagagatatgatcaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagcc 1837505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 2868093 - 2868254
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||||||| || | |||||||||| |||| ||||||||| |||| ||||||||||||       |||||||| || |||||||||||||||||||    
T  2868093 actaaaactgtcacttatgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaa-catatagtgtagggacgattttgttcgattt 2868191  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || |||||||||||||||| ||||||||||||   |||| ||||||||||||||||||    
T  2868192 aaaagaggtaggaccattttcgtgtgttggtcaaaatgtgaggatcaaaagtgtaattaagcc 2868254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 44582442 - 44582603
Alignment:
Q  1 actaaaactgtcatttctatgcgtttct-gtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||||| ||||||| | | || |  ||||||||||| | ||||||||||||       |||||||||||| |||||||||||||||||    
T  44582442 actaaaactgtcatttctgtgcgttttttggagctgaaaatagggagacaagactaaaactgcaaaaaaacatatagtttaaagacgattttgttcgatt 44582541  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    | |||| |||| |||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  44582542 tgaaaatgatatgaccattttcgtgagttgatcaaaatggtagaaccaaaagtgtaattaag 44582603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 37421397 - 37421488
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaa-aagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  37421397 catatagtttaaggacgattttgttcgatttaaaaaaagataggaccattttcgtgagttggtcaaaatggtatgactaaaagtgtaattaa 37421488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 29439375 - 29439465
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| || |||||||||||| ||||||    
T  29439375 catatagtttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagttgatcaaaatggtgggaccaaaagtgcaattaa 29439465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 163
Target Start/End: Complemental strand, 29439056 - 29438930
Alignment:
Q  37 aaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaa 136  Q
    |||||| |||||||||||||||||||       ||| ||||||| ||||||||||||||||||||||| || |||||||| |||||||||||||||||||    
T  29439056 aaatagagagataggactaaaactgcaaaaaaacatttagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaa 29438957  T
Q  137 tagtaggaccaaaagtgtaattaagcc 163  Q
    |   |||||||||||||||||||||||    
T  29438956 tgcaaggaccaaaagtgtaattaagcc 29438930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 30787251 - 30787344
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| || |||| |||||| ||||||||||||||||||    
T  30787251 catatagtttaaggacgattttgttcgattttaaaaagatatgaccattttcgtgagttgatctaaatggtaggatcaaaagtgtaattaagcc 30787344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 44954387 - 44954229
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| |||| || |||||| ||||||||||||       |||||| ||||| |||||||||||| |||||    
T  44954387 actaaaactgtcatttctgtgcgtttctggagttggaaacagagagatacgactaaaactgcaaaaaa-catataatttaaagacgattttgttggattt 44954289  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||| || |||||||||||||||||||||||||| |  |||| |||| |||||||||    
T  44954288 aaaaaaggtatgaccattttcgtgagttggtcaaaatgggtggacaaaaaatgtaattaa 44954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 37421323 - 37421163
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnn-catatagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||||| ||||||| || |||| |||||||||| ||| ||||||||||||        ||||||||||| ||||||||||||||||||    
T  37421323 actaaaactgtcatttctgtgcgtttttggagttggaaatagggaaatatgactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatt 37421224  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||| || || ||||| |||||||| |||||||||||   | ||||||||||||||||||    
T  37421223 taaaagaggtaagaccaatttcgtgaattggtcaaaatgcaaagaccaaaagtgtaattaa 37421163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 2868072 - 2867913
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||||||| || ||||||| ||||||| ||| ||||||||||||       |||||||||||| ||| ||||||||||||||    
T  2868072 actaaaactgtcatttatgtgcgtttttggagttagagatagggaaatatgactaaaactgcaaaaaa-catatagtttaacgacaattttgttcgattt 2867974  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||| ||||| || |||||||||||||||||||||||   | |||||||| ||||||||||    
T  2867973 aaaagagatatgatcattttcgtgagttggtcaaaatgcgatgaccaaaattgtaattaag 2867913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4080182 - 4080021
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||  |||| |||||||||||||| |||||||||||        ||||||||||| |||||||||||||||||||    
T  4080182 actaaaactgtcatttttgtgcgtttctagagttggaaatagggagatatgactaaaactg-taaaaaacatatagtttagggacgattttgttcgattt 4080084  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || || || || ||||||||||||||||| ||   |||||||||||||||||| ||||    
T  4080083 aaaataggtacgatcaatttcgtgagttggtcaagatgcaaggaccaaaagtgtaattgagcc 4080021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 8230026 - 8230184
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||||| |||||||||| |||| ||||||||| |||| ||||||||||||       ||||||||||| |||||||||||||||||||    
T  8230026 actaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 8230124  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||| || ||  ||||||||||||| | |||||||||   || ||||||| |||||||||    
T  8230125 aaaagaggtataaccattttcgtgaataggtcaaaatgcgagaaccaaaaatgtaattaa 8230184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 39485224 - 39485068
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattta 101  Q
    ||||||||||||| ||| || ||||||| ||||  ||||||| ||||||||||||||||||       ||||||||||| |||||||||||||||||||     
T  39485224 ctaaaactgtcatctctctgtgtttctgaagttgaaaatagg-agataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttg 39485127  T
Q  102 aaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||| || |||||||||||||||||| | ||||||||   ||||||||||||||||||||    
T  39485126 aaagaggtaggaccattttcgtgagctagtcaaaatgcgaggaccaaaagtgtaattaa 39485068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 45048314 - 45048158
Alignment:
Q  2 ctaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattta 101  Q
    |||||||||| ||||||||||||||||| ||||  ||||| | || |||||||||||||||       ||||||||||| |||||||||||||| |||||    
T  45048314 ctaaaactgttatttctatgcgtttctggagttgaaaatatg-aggtaggactaaaactgcaaaaaa-catatagtttatggacgattttgttcaattta 45048217  T
Q  102 aaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||| || ||| ||||||||||| |||||||||||||   ||||||||||||||||||||    
T  45048216 aaagaggtagaaccattttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 45048158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 16298843 - 16298683
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||||| |||||| | ||||||||   |||| |||||||| ||||||||||||||||||       ||||||||||| |||||||||||||||||||    
T  16298843 actaaaactatcatttatttgcgtttccagagttggaaataggtagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 16298745  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    |||| || || ||||| ||||||||||||||||||||   ||| |||||| |||||||||||    
T  16298744 aaaagaggtatgaccaatttcgtgagttggtcaaaatgcaagggccaaaaatgtaattaagc 16298683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 1744488 - 1744330
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| |||||||||||||| ||||||||||||        |||||||||| |||||||||| || || |     
T  1744488 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaatatatagtttagggacgattttatttgact- 1744390  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
     |||||| ||||| ||||| |||||||| |||||||||  | |||||||||||||||||||    
T  1744389 -aaaaaggtaggatcatttacgtgagtttgtcaaaatacgaagaccaaaagtgtaattaag 1744330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 50304532 - 50304441
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||||||||  |||||||||||||||||||||| || || ||||||||||||||||||||||||||   |||||||||||||||||||||    
T  50304532 catatagtttagagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaag 50304441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 443936 - 444099
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| |  |||||| || | || |||||||||||||||||||||||||||       ||||||||||| | |||||||||||||||||    
T  443936 actaaaactgtcatttatgcgcgtttatggaattggaaatagggagataggactaaaactgcaaaaaa-catatagtttaggaacgattttgttcgattt 444034  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    |||| || || ||| | ||||||||||||||||||||   | || ||||||| ||||||||||||    
T  444035 aaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaagatcaaaagtataattaagccaa 444099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 44582218 - 44582059
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||| |||||||| | ||||||| || |||| |||| |  |||||||||||||||||||       |||||| ||||  ||||||||||||||||||    
T  44582218 actaaaattgtcatttatgtgcgtttatggagttggaaacaaagagataggactaaaactgcaaaaaa-catataatttagagacgattttgttcgattt 44582120  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||| || |||||||| |||||| |||||||||||||   |||||||||||||||||||||    
T  44582119 aaaagaggtaggaccaatttcgttagttggtcaaaatgtaaggaccaaaagtgtaattaag 44582059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 6224860 - 6224700
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnnc-atatagtttaaggacgattttgttcgatt 99  Q
    |||||||||||||||| | |||||||||| |||| ||||||| |||||| |||||||||||          ||||| |||||||||||||||||||||||    
T  6224860 actaaaactgtcatttatgtgcgtttctggagttggaaatagagagataagactaaaactgtaaaaaatatatataatttaaggacgattttgttcgatt 6224761  T
Q  100 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||   || ||||||||  |||||||||||||||  ||||| ||||| |||||||||    
T  6224760 taaaaaaacaagaaccatttttatgagttggtcaaaatgataggatcaaaaatgtaattaa 6224700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 17641526 - 17641403
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | |||||||||| |||| ||||||||||||||| ||||||||| |       | ||||||||||| || ||||||||||||||    
T  17641526 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatagaactaaaactac-aaaaaacgtatagtttaagaacaattttgttcgattt 17641428  T
Q  101 aaaaaagataggaccattttcgtga 125  Q
    ||||||| || ||||||||||||||    
T  17641427 aaaaaaggtatgaccattttcgtga 17641403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 50926697 - 50926787
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||| ||||| ||||||||||||| ||| |||  |||||||||||||||| ||||||||||   | |||||||||||||||||||||    
T  50926697 atagtttagggacggttttgttcgatttgaaagagacgggaccattttcgtgagctggtcaaaatgcgatgaccaaaagtgtaattaagcc 50926787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 23526748 - 23526659
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    ||||| || ||| ||||||||||||||||||| ||  ||||||||||||||||| ||||||||||   |||||||||||||||| |||||    
T  23526748 atagtctagggatgattttgttcgatttaaaagaggcaggaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaactaagc 23526659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 50926320 - 50926232
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||||| ||||||||||||||||||| ||| || || ||  ||||||||||| |||||||||| | |||||||||| ||||||||||    
T  50926320 atagtttagggacgattttgttcgatttgaaagaggtatgattattttcgtgagctggtcaaaatgggaggaccaaaactgtaattaag 50926232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 17088593 - 17088685
Alignment:
Q  71 atatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||||| ||||| ||||||| ||||| ||| ||  | ||||||||||||||| || |||||||   |||||||||||||||||||||||    
T  17088593 atatagtttagggacggttttgtttgatttgaaagaggcatgaccattttcgtgagctgttcaaaatgagaggaccaaaagtgtaattaagcc 17088685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 44291391 - 44291295
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||||||| |||||||||||||| |||| ||| ||  |  |||||||||||||| ||||||||||   ||||||||||||| ||||||| |||||||    
T  44291391 atagtttatggacgattttgttcaatttgaaagaggcataaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaagtcaaaaaa 44291295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 44802627 - 44802723
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    |||||||| ||||||||||||||  ||| ||| ||  | ||||| ||||||||| ||||||||||   ||||||||||||||||||||||| |||||    
T  44802627 atagtttagggacgattttgttccgtttgaaagaggcatgaccactttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcctaaaaa 44802723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 29021252 - 29021411
Alignment:
Q  4 aaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncat-atagtttaaggacgattttgttcgatttaa 102  Q
    ||||||||||||| | |||||||||| ||||  |||||||| | || ||||||||||||       | | ||| |||| ||||||||||||||||||| |    
T  29021252 aaaactgtcatttatgtgcgtttctggagttgaaaataggggg-taagactaaaactgcaaaaaaccgtgataatttagggacgattttgttcgatttga 29021350  T
Q  103 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    || ||  | || |||||||||||| ||||||||||   ||||||||||||| |||||||||    
T  29021351 aagaggcatgaacattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaagcc 29021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 9833537 - 9833699
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    ||||||| ||| |||||| |||||||||| ||||  |||||||| | |||||||||||||||          ||| |||| |||||||||||||||||||    
T  9833537 actaaaaatgttatttctgtgcgtttctggagttgaaaataggggg-taggactaaaactgcaaaaaacataatattttagggacgattttgttcgattt 9833635  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
     ||| ||  | ||| |||||||||||||||||||| ||  |||| |||||||  ||||||||||    
T  9833636 gaaagaggcatgactattttcgtgagttggtcaaagtacaaggatcaaaagtacaattaagcca 9833699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 166
Target Start/End: Complemental strand, 25274845 - 25274753
Alignment:
Q  74 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaa 166  Q
    ||||||| | ||| ||||||||||||| ||| ||  | ||||||||||||||| ||||||||||   ||||||||||||| ||||| ||||||    
T  25274845 tagtttaggaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgcaattatgccaaa 25274753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 45048599 - 45048678
Alignment:
Q  81 aggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||| ||||||||||||  ||| || || ||||||||||||||  ||||||||||   ||||||||||||||||||||    
T  45048599 aggacggttttgttcgattggaaagaggtatgaccattttcgtgaactggtcaaaatgcgaggaccaaaagtgtaattaa 45048678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 29020966 - 29020876
Alignment:
Q  77 tttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaa 167  Q
    |||||||| ||||||||||||||||||| ||| | |||||||||  |||| || ||||||||  | ||||| | ||| |||||||||||||    
T  29020966 tttaaggatgattttgttcgatttaaaagagacatgaccatttttatgagctgatcaaaatacgaagaccatatgtgcaattaagccaaaa 29020876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 29870111 - 29870172
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaata 171  Q
    ||||||| |||| ||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  29870111 aggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaaaaata 29870172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 39843497 - 39843570
Alignment:
Q  90 ttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||||||| ||||||  ||||||| ||||||||||||||| ||||   |||||| |||||||||| |||||    
T  39843497 ttgttcgatttgaaaaaggcaggaccaatttcgtgagttggtctaaatgcgaggaccgaaagtgtaataaagcc 39843570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 44291777 - 44291854
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    ||||||||| |||||||||||| ||| | |||||||||| |||| |||||||||||  ||||| |||| || ||||||    
T  44291777 gacgattttattcgatttaaaagagacatgaccattttcatgagctggtcaaaatacaaggactaaaaatgcaattaa 44291854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 23526986 - 23527074
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    ||||||||  |||| ||||||||||||||||||||  | |||||||||| |||| || |||||||   |||| ||||||| ||||||||    
T  23526986 atagtttagagacggttttgttcgatttaaaaaaggcatgaccattttcatgagctgatcaaaatgtgaggatcaaaagtataattaag 23527074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 50419473 - 50419393
Alignment:
Q  80 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||| | |||||||||||| ||||||| | ||||||||| ||||||||||  ||||   ||||||||||||| ||||||    
T  50419473 aaggactactttgttcgatttgaaaaagacatgaccatttttgtgagttggtttaaatgcgaggaccaaaagtgcaattaa 50419393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 33144411 - 33144470
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    ||||||| |||||||||| || ||||| |  ||||||||||||||||||||| |||||||    
T  33144411 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagtcaaaaaa 33144470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 50419731 - 50419806
Alignment:
Q  88 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||| |||| ||||||  ||||||| ||||||||||||||| ||||   | ||||||||||| |||||||||    
T  50419731 ttttgttcaattttaaaaaggcaggaccaatttcgtgagttggtctaaatgcgatgaccaaaagtgcaattaagcc 50419806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 17088228 - 17088146
Alignment:
Q  81 aggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||| ||||||||||||| ||| ||  |  |||||||||||||| ||||||||||   | |||||| ||||||||||||||    
T  17088228 aggacggttttgttcgatttgaaagaggcaaaaccattttcgtgagctggtcaaaatgcgatgaccaacagtgtaattaagcc 17088146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 26859112 - 26859054
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    ||||||| |||||| ||| || ||||| |  ||||||||||||||||||||||||||||    
T  26859112 aggaccagtttcgttagtaggccaaaacacaaggaccaaaagtgtaattaagccaaaaa 26859054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 29307434 - 29307488
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    ||||||| |||||||||| |||||||| |  ||||||||||||| ||||||||||    
T  29307434 aggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagcca 29307488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 5540310 - 5540363
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  5540310 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5540363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 8679033 - 8679090
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaa 167  Q
    ||||||| || ||||||| || ||||| |  |||||||||||||||||||||||||||    
T  8679033 aggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaaa 8679090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 18984611 - 18984664
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  18984611 aggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcc 18984664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30787157 - 30787214
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaa 58  Q
    |||||||||||||||||| ||| ||| || ||||  ||||||||| ||||||||||||    
T  30787157 actaaaactgtcatttctctgcatttatggagttgaaaatagggaaataggactaaaa 30787214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 39154512 - 39154565
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  39154512 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39154565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 50970331 - 50970278
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||    
T  50970331 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 50970278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 52268343 - 52268290
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||  || |||||||  |||||||||||||||||||||||    
T  52268343 aggaccaatttcgtgagcaggccaaaatacgaggaccaaaagtgtaattaagcc 52268290  T

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Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 5539869 - 5539817
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    ||||||| |||||||||| || ||||| |  ||||||||||||||||||||||    
T  5539869 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 8678594 - 8678542
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 162  Q
    ||||||| |||||||||| || ||||| |  ||||||||||||||||||||||    
T  8678594 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8678542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 9844742 - 9844818
Alignment:
Q  89 tttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaa 165  Q
    |||||||||||| ||||||| | ||||| || ||||  ||||| ||||||| | ||| ||||||| |||||||||||    
T  9844742 tttgttcgatttgaaaaagacatgaccaattgcgtggattggttaaaataggaagactaaaagtgcaattaagccaa 9844818  T

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Target: scaffold0712 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 6551 - 6391
Alignment:
Q  3 taaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaa 102  Q
    |||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||       |||||| ||||||||||||||||||||||||||    
T  6551 taaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaa-catataatttaaggacgattttgttcgatttaa 6453  T
Q  103 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    ||||||||| ||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  6452 aaaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaagcca 6391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 6776 - 6939
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagatagg----actaaaactgcnnnnnnncatatagtttaaggacgattttgttcg 96  Q
    |||||||||||||||||| |||||||||| ||||  |||||||||||||||    |||||||||||       ||| ||||||| | |||||||||||||    
T  6776 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatgtagtttaggtacgattttgttcg 6875  T
Q  97 atttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||| |  || ||||| |||||| | |||||||||||   ||||||||||| ||||||||    
T  6876 atttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaa 6939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 6569 - 6409
Alignment:
Q  3 taaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaa 102  Q
    |||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||       |||||| ||||||||||||||||||||||||||    
T  6569 taaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaa-catataatttaaggacgattttgttcgatttaa 6471  T
Q  103 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    ||||||||| ||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  6470 aaaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaagcca 6409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 6794 - 6957
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagatagg----actaaaactgcnnnnnnncatatagtttaaggacgattttgttcg 96  Q
    |||||||||||||||||| |||||||||| ||||  |||||||||||||||    |||||||||||       ||| ||||||| | |||||||||||||    
T  6794 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatgtagtttaggtacgattttgttcg 6893  T
Q  97 atttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||| |  || ||||| |||||| | |||||||||||   ||||||||||| ||||||||    
T  6894 atttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaa 6957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 89; Significance: 6e-43; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 46655 - 46820
Alignment:
Q  4 aaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgatttaaa 103  Q
    |||| |||||||| | ||||||| || |||| ||||||||| ||||| ||||||||| |       |||||||||||| |||||||||||||||||||||    
T  46655 aaaattgtcatttatgtgcgtttttggagttggaaatagggtgatagaactaaaactacaaaaaaacatatagtttaaagacgattttgttcgatttaaa 46754  T
Q  104 aaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaaa 169  Q
    | | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  46755 atatataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctaaaaa 46820  T

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Target: scaffold0097; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 46428 - 46266
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgcnnnnnnncatatagtttaaggacgattttgttcgattt 100  Q
    |||||||||||||||| | ||| ||| || | || |||||||||||||| ||||||||||||       ||||||||||| ||| |||||||||||||||    
T  46428 actaaaactgtcatttttgtgcatttatggaattggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggatgattttgttcgattt 46329  T
Q  101 aaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||| || ||| ||||||||||| |||||||||||||   ||||||||||||| |||||||||    
T  46328 aaaagaggtagaaccattttcgtaagttggtcaaaatgcgaggaccaaaagtgcaattaagcc 46266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 210793 - 210883
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||| ||||| ||||||||||||| ||| ||  |||||||||||| |||||||||||||||   |||||||||||||||||||||||    
T  210793 atagtttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 210883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 205823 - 205911
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaag 161  Q
    |||||||| ||||| ||||||||||||| ||| ||  ||||||||||||||||||||||||||||   ||||| |||||||||||||||    
T  205823 atagtttagggacggttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 205018 - 204931
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||| |||| |||||||| ||||| ||| ||  ||||||||  ||||||| |||||||||||  ||||||||||||||||||||    
T  205018 atagtttagggacaattttgtttgatttgaaagaggaaggaccatagtcgtgagctggtcaaaatacaaggaccaaaagtgtaattaa 204931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 205448 - 205361
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||| |||| | |||||||||||| ||| ||  ||||||||  ||||||| |||||||||||  |||| |||||||||||||||    
T  205448 atagtttagggacaaatttgttcgatttgaaagaggaaggaccatagtcgtgagctggtcaaaatacaaggatcaaaagtgtaattaa 205361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 78478 - 78417
Alignment:
Q  1 actaaaactgtcatttctatgcgtttctgtagttagaaatagggagataggactaaaactgc 62  Q
    ||||||| |||||||||||||| |||||| |||| ||||||| |||||||||||||||||||    
T  78478 actaaaattgtcatttctatgcatttctggagttggaaatagagagataggactaaaactgc 78417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 518 - 611
Alignment:
Q  70 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||||||  |||  ||||||||||||| ||| ||  | ||||||||||||||| | ||||||||   |||| ||||||||||||||||||    
T  518 catatagtttagagactgttttgttcgatttgaaagaggcaagaccattttcgtgagctcgtcaaaatgcgaggatcaaaagtgtaattaagcc 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 1720 - 1667
Alignment:
Q  110 aggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    ||||||| |||||||||| || ||||| || |||||||||||||||||||||||    
T  1720 aggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagcc 1667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 15554 - 15645
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcca 164  Q
    |||||||| ||||  ||||||||||||| ||| ||  ||||||||||||||||| || |||||||   || ||||||| | |||||||||||    
T  15554 atagtttagggacagttttgttcgatttgaaagagtcaggaccattttcgtgagctgatcaaaatgcgagaaccaaaaatctaattaagcca 15645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 19121 - 19171
Alignment:
Q  118 tttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagccaaaaa 168  Q
    |||||||||| || ||||| |  ||||||||||||||||||||||||||||    
T  19121 tttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaaaa 19171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 61926 - 62000
Alignment:
Q  86 gattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 160  Q
    |||||||||| |||| |||| | ||||||||||||||||||| |  ||||| |  |||| |||||||||||||||    
T  61926 gattttgttctattttaaaagggtaggaccattttcgtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 159337 - 159427
Alignment:
Q  73 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 163  Q
    |||||||| | ||||||||||||||||| ||| ||| | |||||||||||||||  ||| ||||| | ||||  ||| ||| |||||||||    
T  159337 atagtttatgaacgattttgttcgatttgaaagagacatgaccattttcgtgagccggtaaaaatggaaggattaaatgtgcaattaagcc 159427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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