View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1128_low_16 (Length: 364)
Name: NF1128_low_16
Description: NF1128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1128_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 175; Significance: 4e-94; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 103 - 284
Target Start/End: Complemental strand, 6467795 - 6467613
Alignment:
| Q |
103 |
ctattctctaaccattgatctcaatttcaacccattgctttgtttgaaacttgtagattcataatgtatttccacagagtgaaatctaacatggttagtg |
202 |
Q |
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| T |
6467795 |
ctattctctaaccattgatctcaatttcaacccattgctttgtttgaaacttgtagattcataatgtatttccacagagtgaaatctaacatggttagtg |
6467696 |
T |
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| Q |
203 |
ccaaactatcttgacattctcactttcattttctttgaatattatctccttttata-accatatgttcattattatttttcat |
284 |
Q |
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| T |
6467695 |
ccaaactatcttgacattctcactttcattttctttgaatattatctccttttatataccatatgttcattattatttttcat |
6467613 |
T |
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