View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11291_high_1 (Length: 483)
Name: NF11291_high_1
Description: NF11291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11291_high_1 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 436; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 1 - 467
Target Start/End: Complemental strand, 36314882 - 36314413
Alignment:
| Q |
1 |
ttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtat |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
36314882 |
ttcatggttgactcctttgctacaaacgtcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcgggaaagtgtat |
36314783 |
T |
|
| Q |
101 |
tggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36314782 |
tggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccagtgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaag |
36314683 |
T |
|
| Q |
201 |
attctttcgcttttgaagttaaagatgggaagtttatacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggaga |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
36314682 |
attctttcgcttttgaagttaaagatgggaagtttatatgatgggagctatcctcgaagggcaagttaacaagtggtgttgaagacaatgctagtggaga |
36314583 |
T |
|
| Q |
301 |
aattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcag |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36314582 |
aattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcag |
36314483 |
T |
|
| Q |
401 |
aaaaaggtgggaacacc---aagcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggtt |
467 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36314482 |
aaaaaggtgggaacaccaaaaagcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggtt |
36314413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 28)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 419
Target Start/End: Original strand, 19345055 - 19345458
Alignment:
| Q |
1 |
ttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtat |
100 |
Q |
| |
|
||||||| ||||||||| ||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| || |||| |
|
|
| T |
19345055 |
ttcatggatgactccttcgctaccaactccaggtgaatttagtcttgaatgggaaccaaaagaaggtgaattgaacatcaagaaaagcggcatagcgtat |
19345154 |
T |
|
| Q |
101 |
tggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaag |
200 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||| |||||||||||||| | ||| ||||||| ||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
19345155 |
tggaaaagcggaaaacttaatagcaatggaatattcgagaacattcccacgaaagttcaacgtatatatcagtacattattgtctctaacaagaatgaag |
19345254 |
T |
|
| Q |
201 |
attctttcgcttttgaagttaaagatgggaagtttatacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggaga |
300 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||||| | ||| ||||||| || | |||| | ||| |||| |||||| |
|
|
| T |
19345255 |
attctttcgctttcgaagttaaagatgggaagtttgcacgatggcaactaacctcgaacgggaggttagta---ggtcatga------------tggaga |
19345339 |
T |
|
| Q |
301 |
aattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcag |
400 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||| |
|
|
| T |
19345340 |
tattgggaatgcagatatgtgttatggatataatagcaatggagggtgccaaaaatgggaggaaataccaaattgtagggaaaatggtgaggtttttcag |
19345439 |
T |
|
| Q |
401 |
aaaaaggtgggaacaccaa |
419 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
19345440 |
aaaatggtgggaacaccaa |
19345458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 419
Target Start/End: Complemental strand, 19504288 - 19503885
Alignment:
| Q |
1 |
ttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtat |
100 |
Q |
| |
|
||||||||||||||||| ||||| |||| ||||| |||||||||||| ||||||||||||| || ||||||||||||| | ||| ||||||||||| || |
|
|
| T |
19504288 |
ttcatggttgactccttcgctaccaactccaggtaaatttagtcttgtatgggaaccaaaagaacgtgaattgaacataaggaaaagcggcaaagtgcat |
19504189 |
T |
|
| Q |
101 |
tggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaag |
200 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| |||||||||||||| | || ||||||| ||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
19504188 |
tggaaaagcggaaaacttaaaagcaatggaatattcgagaacattcccacaaaagttcaacgtatatatcagtacattattgtctctaacaagaatgaag |
19504089 |
T |
|
| Q |
201 |
attctttcgcttttgaagttaaagatgggaagtttatacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggaga |
300 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||||| | ||| |||||||||| | |||| | ||| |||| |||||| |
|
|
| T |
19504088 |
attctttcgctttcgaagttaaagatgggaagtttgcacgatggcaactaacctcgaaggggaggttagta---ggtcatga------------tggaga |
19504004 |
T |
|
| Q |
301 |
aattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcag |
400 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||| |
|
|
| T |
19504003 |
gattgggaatgcagatatgtgttatggatataatagcaatggagggtgccaaaaatgggaggaaataccaaattgtagggaaaatggtgaggtttttcag |
19503904 |
T |
|
| Q |
401 |
aaaaaggtgggaacaccaa |
419 |
Q |
| |
|
|||| | ||||||||||| |
|
|
| T |
19503903 |
aaaattgcgggaacaccaa |
19503885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 5 - 393
Target Start/End: Original strand, 19390473 - 19390864
Alignment:
| Q |
5 |
tggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattgga |
104 |
Q |
| |
|
|||||| || ||| ||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
19390473 |
tggttggcttcttcgctaccaactccaggtgaatttagtcttgaatgggaaccaaaacaaggggaattgaacatcaagaaacgcggcaaagtgtattgga |
19390572 |
T |
|
| Q |
105 |
aaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattc |
204 |
Q |
| |
|
|||| |||||||||||||||||||| | |||||||||||||| |||||||||||| ||| ||||| ||||||||||| ||||||||| |||||||||| |
|
|
| T |
19390573 |
aaagcggaaaacttaaaagcaatggtttattcgagaacattccggtgaatgttcaacgtatatatcaatacattattgtctctaacaaggatgaagattc |
19390672 |
T |
|
| Q |
205 |
tttcgcttttgaagttaaagatgggaagtttatacgatgggagctatcctcgaagggcaagttaacaagtggtgatga---agacaatgctagtggagaa |
301 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||||||| | |||||||||| | ||||| ||||| |||||| ||| | | ||||| ||| |
|
|
| T |
19390673 |
ttttgctttcgaagttaaagatgggaagtttatacgatggttcattacctcgaaggggaggttaataagtgctgatgagggagagatttatagtgcagac |
19390772 |
T |
|
| Q |
302 |
attggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggt |
393 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
19390773 |
attgctaatgcagataagtgttatggatataatagtgatgccgggtgccaaaaatgggaggatataccaacttgcagggaccctcgtgaggt |
19390864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 36 - 422
Target Start/End: Original strand, 19410701 - 19411072
Alignment:
| Q |
36 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgtt |
135 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| | || |
|
|
| T |
19410701 |
aatttaatcttgaatgggaaccaaaacaaggtgaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattatt |
19410800 |
T |
|
| Q |
136 |
cgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagttt |
235 |
Q |
| |
|
|||||| ||||| ||||||||| || |||||||||||||||||| ||||||||| |||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
19410801 |
cgagaatattccggccaatgttcaaagtaggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagttt |
19410900 |
T |
|
| Q |
236 |
atacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataata |
335 |
Q |
| |
|
|| |||||| |||||||||||||| |||||| | |||||||| |||| | |||| ||||||||||| ||||| |||||||||| |
|
|
| T |
19410901 |
gcacaatgggaactatcctcgaaggggaagttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggatataata |
19410985 |
T |
|
| Q |
336 |
gcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagca |
422 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| ||||| |||||||| |
|
|
| T |
19410986 |
gtgatggagggtgccaaaaatgggaggatataccaacttgcagggaacctggtgagatgtttcagaaaaaggcgggaagaccaagca |
19411072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 36 - 422
Target Start/End: Original strand, 19457720 - 19458091
Alignment:
| Q |
36 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgtt |
135 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| | || |
|
|
| T |
19457720 |
aatttaatcttgaatgggaaccaaaacaaggtgaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattatt |
19457819 |
T |
|
| Q |
136 |
cgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagttt |
235 |
Q |
| |
|
|||||| ||||| ||||||||| || |||||||||||||||||| ||||||||| |||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
19457820 |
cgagaatattccggccaatgttcaaagtaggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagttt |
19457919 |
T |
|
| Q |
236 |
atacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataata |
335 |
Q |
| |
|
|| |||||| |||||||||||||| |||||| | |||||||| |||| | |||| ||||||||||| ||||| |||||||||| |
|
|
| T |
19457920 |
gcacaatgggaactatcctcgaaggggaagttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggatataata |
19458004 |
T |
|
| Q |
336 |
gcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagca |
422 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| ||||| |||||||| |
|
|
| T |
19458005 |
gtgatggagggtgccaaaaatgggaggatataccaacttgcagggaacctggtgagatgtttcagaaaaaggcgggaagaccaagca |
19458091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 36 - 422
Target Start/End: Complemental strand, 19523358 - 19522987
Alignment:
| Q |
36 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgtt |
135 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| | || |
|
|
| T |
19523358 |
aatttaatcttgaatgggaaccaaaacaaggtgaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattatt |
19523259 |
T |
|
| Q |
136 |
cgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagttt |
235 |
Q |
| |
|
|||||| ||||| ||||||||| || |||||||||||||||||| ||||||||| |||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
19523258 |
cgagaatattccggccaatgttcaaagtaggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagttt |
19523159 |
T |
|
| Q |
236 |
atacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataata |
335 |
Q |
| |
|
|| |||||| |||||||||||||| |||||| | |||||||| |||| | |||| ||||||||||| ||||| |||||||||| |
|
|
| T |
19523158 |
gcacaatgggaactatcctcgaaggggaagttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggatataata |
19523074 |
T |
|
| Q |
336 |
gcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagca |
422 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| ||||| |||||||| |
|
|
| T |
19523073 |
gtgatggagggtgccaaaaatgggaggatataccaacttgcagggaacctggtgagatgtttcagaaaaaggcgggaagaccaagca |
19522987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 19337339 - 19337582
Alignment:
| Q |
1 |
ttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtat |
100 |
Q |
| |
|
|||| ||||| ||| || ||||| |||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| | ||||||||| || |
|
|
| T |
19337339 |
ttcacggttggctcattcgctaccaactccaggtgaacttagtcttgaatgggaaccaaaagaaggtgaattgaacatcaggaaaagtggcaaagtgcat |
19337438 |
T |
|
| Q |
101 |
tggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaag |
200 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||| ||| || |||||||||||||| ||||||||| |||||| |
|
|
| T |
19337439 |
tggaaaagtggaaaactcaaaagcaatggaatgttcgagaacattcctgcgaaagttcaacgtatataccagtacattattgtgtctaacaaggatgaag |
19337538 |
T |
|
| Q |
201 |
attctttcgcttttgaagttaaagatgggaagtttatacgatgg |
244 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
19337539 |
attcttttgcttttgaagttaaagatgggaaatttatacgatgg |
19337582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 36 - 419
Target Start/End: Original strand, 19592051 - 19592416
Alignment:
| Q |
36 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgtt |
135 |
Q |
| |
|
|||||| ||||||||||| ||||||| |||| |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| | || |
|
|
| T |
19592051 |
aatttaatcttgaatggggaccaaaagaaggagaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattatt |
19592150 |
T |
|
| Q |
136 |
cgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagttt |
235 |
Q |
| |
|
|||||| ||||| ||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
19592151 |
cgagaatattccggccaatgttcaaaataggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagttt |
19592250 |
T |
|
| Q |
236 |
atacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataata |
335 |
Q |
| |
|
|| |||||| ||| |||||| || | |||| | |||||||| |||| | |||| ||||||||||| ||||| |||| ||| |
|
|
| T |
19592251 |
gcacaatgggaactaatctcgaaagggaggttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggat---ata |
19592332 |
T |
|
| Q |
336 |
gcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaa |
419 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
19592333 |
gtgatggaggatgccaaaaatgggaggatataccaacttgcagggaacctggtgaggtttttcagaaaaaggcgggaacaccaa |
19592416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 36 - 422
Target Start/End: Complemental strand, 19469723 - 19469355
Alignment:
| Q |
36 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgtt |
135 |
Q |
| |
|
|||||| ||||||||||| ||||||| |||| |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| | || |
|
|
| T |
19469723 |
aatttaatcttgaatggggaccaaaagaaggagaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattatt |
19469624 |
T |
|
| Q |
136 |
cgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagttt |
235 |
Q |
| |
|
|||||| ||||| ||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
19469623 |
cgagaatattccggccaatgttcaaaataggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagttt |
19469524 |
T |
|
| Q |
236 |
atacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataata |
335 |
Q |
| |
|
|| |||||| ||| |||||| || | |||| | |||||||| |||| | |||| ||||||||||| ||||| |||| ||| |
|
|
| T |
19469523 |
gcacaatgggaactaatctcgaaagggaggttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggat---ata |
19469442 |
T |
|
| Q |
336 |
gcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagca |
422 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||| |
|
|
| T |
19469441 |
gtgatggaggatgccaaaaatgggaggatataccaacttgcagggaacctggtgaggtgtttcagaaaaaggcgggaagaccaagca |
19469355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 36 - 422
Target Start/End: Complemental strand, 19540647 - 19540279
Alignment:
| Q |
36 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgtt |
135 |
Q |
| |
|
|||||| ||||||||||| ||||||| |||| |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| | || |
|
|
| T |
19540647 |
aatttaatcttgaatggggaccaaaagaaggagaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattatt |
19540548 |
T |
|
| Q |
136 |
cgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagttt |
235 |
Q |
| |
|
|||||| ||||| ||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
19540547 |
cgagaatattccggccaatgttcaaaataggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagttt |
19540448 |
T |
|
| Q |
236 |
atacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataata |
335 |
Q |
| |
|
|| |||||| ||| |||||| || | |||| | |||||||| |||| | |||| ||||||||||| ||||| |||| ||| |
|
|
| T |
19540447 |
gcacaatgggaactaatctcgaaagggaggttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggat---ata |
19540366 |
T |
|
| Q |
336 |
gcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagca |
422 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||| |
|
|
| T |
19540365 |
gtgatggaggatgccaaaaatgggaggatataccaacttgcagggaacctggtgaggtgtttcagaaaaaggcgggaagaccaagca |
19540279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 25 - 244
Target Start/End: Original strand, 19355383 - 19355602
Alignment:
| Q |
25 |
aacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagc |
124 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||| |||||||||| |||||||||| ||| |
|
|
| T |
19355383 |
aacttcaggtgaatttagtcttgaatgggaaccaaaagaaggtgaattgaacataaggaaaagcggcaaagtgcattggaaaagcggaaaacttagaagt |
19355482 |
T |
|
| Q |
125 |
aatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaag |
224 |
Q |
| |
|
|||||||| ||||||||||||||| ||| |||||| ||| |||| |||||||||||| ||||||||| ||||||||||||| ||||| |||||||| | |
|
|
| T |
19355483 |
aatggaatattcgagaacattccagcgaaagttcaaagtatatatcggtacattattgtgtctaacaaggatgaagattcttttgctttcgaagttaatg |
19355582 |
T |
|
| Q |
225 |
atgggaagtttatacgatgg |
244 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
19355583 |
atgggaattttatacgatgg |
19355602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 28 - 213
Target Start/End: Complemental strand, 19468795 - 19468610
Alignment:
| Q |
28 |
ttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaat |
127 |
Q |
| |
|
|||||||||||||| ||| || ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
19468795 |
ttcaggtgaatttaatctagattgggaaccaaaacaaggtgaattgatcatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaat |
19468696 |
T |
|
| Q |
128 |
ggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttt |
213 |
Q |
| |
|
||| | |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| |||| |
|
|
| T |
19468695 |
ggattattcgagaatattccggtgaatgttcaacatatgtatcagtacattattgtctctaacaaagacgaagattctttcacttt |
19468610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 28 - 213
Target Start/End: Complemental strand, 19555716 - 19555531
Alignment:
| Q |
28 |
ttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaat |
127 |
Q |
| |
|
|||||||||||||| ||| || ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
19555716 |
ttcaggtgaatttaatctagattgggaaccaaaacaaggtgaattgatcatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaat |
19555617 |
T |
|
| Q |
128 |
ggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttt |
213 |
Q |
| |
|
||| | |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| |||| |
|
|
| T |
19555616 |
ggattattcgagaatattccggtgaatgttcaacatatgtatcagtacattattgtctctaacaaagacgaagattctttcacttt |
19555531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 25 - 231
Target Start/End: Original strand, 19376527 - 19376733
Alignment:
| Q |
25 |
aacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagc |
124 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
19376527 |
aacttcaggtgaatttagtcttgagtgggaaccaaaacaaggtgaactgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagc |
19376626 |
T |
|
| Q |
125 |
aatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaag |
224 |
Q |
| |
|
|||||| | |||||||| ||||| ||||||||| ||||||||| |||||| ||||| ||||||||| |||||||||| || ||||||| |||||| |
|
|
| T |
19376627 |
aatggattattcgagaatattccggccaatgttcaaaatatgtatcggtacatcattgtctctaacaaggatgaagattcctttagttttgaaattaaag |
19376726 |
T |
|
| Q |
225 |
atgggaa |
231 |
Q |
| |
|
|| |||| |
|
|
| T |
19376727 |
atcggaa |
19376733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 19287600 - 19287825
Alignment:
| Q |
1 |
ttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtat |
100 |
Q |
| |
|
|||||||||| ||| || ||||| || |||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19287600 |
ttcatggttggctcattcgctaccaaattcaggtggatttagtcttgaatgggaacctaaagaaggtgaattgaacatcaagcaacgcggcaaagtgtat |
19287699 |
T |
|
| Q |
101 |
tggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaag |
200 |
Q |
| |
|
|||||||| ||||||| || | ||||||| | ||||||||||||||| |||| ||||||| | ||||||| ||||||||||| ||||||||| |||||| |
|
|
| T |
19287700 |
tggaaaagcggaaaacgtagacgcaatggtttattcgagaacattccagtgaaagttcaacgtgtgtatcaatacattattgtctctaacaaggatgaag |
19287799 |
T |
|
| Q |
201 |
attctttcgcttttgaagttaaagat |
226 |
Q |
| |
|
| || ||| |||| ||| | |||||| |
|
|
| T |
19287800 |
actccttcactttcgaaatcaaagat |
19287825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 19173042 - 19172821
Alignment:
| Q |
5 |
tggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattgga |
104 |
Q |
| |
|
|||||| |||||| ||||| | |||||||| ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
19173042 |
tggttggctccttcgctaccgaattcaggtggatttagtgttgaatgggaaccaatggaaggtgaattgaacatcaagcaacgcggcaaagtgtattgga |
19172943 |
T |
|
| Q |
105 |
aaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattc |
204 |
Q |
| |
|
|||| ||||||||||| ||||||||| | ||| ||||||||| | |||| ||||||||| ||||||| ||||||||||| ||||||||| ||||||| || |
|
|
| T |
19172942 |
aaagcggaaaacttaacagcaatggattattcaagaacattctagtgaaagttcaacatgtgtatcaatacattattgtctctaacaaggatgaagactc |
19172843 |
T |
|
| Q |
205 |
tttcgcttttgaagttaaagat |
226 |
Q |
| |
|
||| |||| ||| | |||||| |
|
|
| T |
19172842 |
cttcactttcgaaatcaaagat |
19172821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 19404635 - 19404846
Alignment:
| Q |
2 |
tcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtatt |
101 |
Q |
| |
|
|||||||| ||||||| || | || ||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| ||| | ||||||||||||| |
|
|
| T |
19404635 |
tcatggttaactccttcgcggccaaattcaggtaaatttagtcttgagtgggaaccaaaacaaggtgaactgaacatcaagaaaagaggcaaagtgtatt |
19404734 |
T |
|
| Q |
102 |
ggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaaga |
201 |
Q |
| |
|
||||||| ||||||||||||||| ||||| | |||||||| ||||| ||||||||| ||||||||| |||| |||||| ||||||||| ||||||| |
|
|
| T |
19404735 |
ggaaaagcggaaaacttaaaagcgatggattattcgagaatattccggccaatgttcaaactatgtatcaatacactattgtctctaacaaggatgaaga |
19404834 |
T |
|
| Q |
202 |
ttctttcgcttt |
213 |
Q |
| |
|
||||||| |||| |
|
|
| T |
19404835 |
ttctttcacttt |
19404846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 307 - 419
Target Start/End: Original strand, 19337681 - 19337793
Alignment:
| Q |
307 |
aaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaag |
406 |
Q |
| |
|
||||||||| || |||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| | |
|
|
| T |
19337681 |
aaatgcagacatgtgttatggatataatagcgatggagggtgccaaaaatgggaggaaataccaaattgtagggaacctggtgaggtttttcggaaaatg |
19337780 |
T |
|
| Q |
407 |
gtgggaacaccaa |
419 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
19337781 |
gtgggaagaccaa |
19337793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 320 - 419
Target Start/End: Original strand, 19355714 - 19355813
Alignment:
| Q |
320 |
tgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaa |
419 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
19355714 |
tgttatggatataatagcgatggagggtgccaaaaatgggaggaaataccaaattgtagggaacctggtgaggtttttcggaaaaaggtgggaagaccaa |
19355813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 296 - 419
Target Start/End: Complemental strand, 19468533 - 19468410
Alignment:
| Q |
296 |
ggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggttt |
395 |
Q |
| |
|
||||| |||| |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
19468533 |
ggagatattgtaaatgcagatatgtgttatggatataatagtgatggaggatgccaaaaatgggaggatataccaacttgtagggcacctggtgaggggt |
19468434 |
T |
|
| Q |
396 |
ttcagaaaaaggtgggaacaccaa |
419 |
Q |
| |
|
|||||||||||| ||||| ||||| |
|
|
| T |
19468433 |
ttcagaaaaaggcgggaagaccaa |
19468410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 296 - 419
Target Start/End: Complemental strand, 19555454 - 19555331
Alignment:
| Q |
296 |
ggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggttt |
395 |
Q |
| |
|
||||| |||| |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
19555454 |
ggagatattgtaaatgcagatatgtgttatggatataatagtgatggaggatgccaaaaatgggaggatataccaacttgtagggcacctggtgaggggt |
19555355 |
T |
|
| Q |
396 |
ttcagaaaaaggtgggaacaccaa |
419 |
Q |
| |
|
|||||||||||| ||||| ||||| |
|
|
| T |
19555354 |
ttcagaaaaaggcgggaagaccaa |
19555331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 296 - 401
Target Start/End: Original strand, 19404923 - 19405028
Alignment:
| Q |
296 |
ggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggttt |
395 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
19404923 |
ggagatattggaaatgcagatatgtgttatggatataatagggacggagggtgccaaaagtgggaggatataccaacttgtagggaacctggtgaggtgt |
19405022 |
T |
|
| Q |
396 |
ttcaga |
401 |
Q |
| |
|
|||||| |
|
|
| T |
19405023 |
ttcaga |
19405028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 302 - 399
Target Start/End: Original strand, 19376801 - 19376898
Alignment:
| Q |
302 |
attggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttca |
399 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
19376801 |
attggaaatgcagatatatgttatggatataatagtgatcgagggtgccaaaaatgggaggatataccagcttgcagggaacctggtgaggtgtttca |
19376898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 201
Target Start/End: Original strand, 19370913 - 19371046
Alignment:
| Q |
68 |
gaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgt |
167 |
Q |
| |
|
||||||||||| || |||| ||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||||||| |||||| |||||| ||| |
|
|
| T |
19370913 |
gaattgaacattaagaaacaaggcaaagtgcattggaaaagtggaaaacttagaagcaatggattattcgagaacattccagagaatgtccaacatgtgt |
19371012 |
T |
|
| Q |
168 |
atcagtacattattgtttctaacaagaatgaaga |
201 |
Q |
| |
|
||| ||||| ||||| |||||||| ||||||| |
|
|
| T |
19371013 |
atcgatacatgattgtctctaacaaagatgaaga |
19371046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 393
Target Start/End: Complemental strand, 19172742 - 19172660
Alignment:
| Q |
311 |
gcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggt |
393 |
Q |
| |
|
|||||||| |||||||| ||||||| | |||||||||||||||||||||||||||||||||| || |||||||| |||||||| |
|
|
| T |
19172742 |
gcagatatgtgttatggctataataccgatggagggtgccaaaaatgggaggatataccaacctgcagggaacccggtgaggt |
19172660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 406
Target Start/End: Original strand, 19287901 - 19287999
Alignment:
| Q |
308 |
aatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaag |
406 |
Q |
| |
|
|||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||||||| ||||||||| ||||| |||||| |
|
|
| T |
19287901 |
aatgcagataagtgttatggatataataatgatgaagggtgccaaaaatgggaggatatgccaacttgcagggaacgtggtgaggtctttcaaaaaaag |
19287999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 68 - 201
Target Start/End: Original strand, 19341133 - 19341266
Alignment:
| Q |
68 |
gaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgt |
167 |
Q |
| |
|
||||||||||| || |||| ||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||| | |||||| |||||| ||| |
|
|
| T |
19341133 |
gaattgaacattaagaaacaaggcaaagtgcattggaaaagtggaaaacttggaagcaatggattattcgagaacattctagagaatgtccaacatgtgt |
19341232 |
T |
|
| Q |
168 |
atcagtacattattgtttctaacaagaatgaaga |
201 |
Q |
| |
|
||| ||||| ||||| |||||||| ||||||| |
|
|
| T |
19341233 |
atcgatacatgattgtctctaacaaagatgaaga |
19341266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 19371145 - 19371192
Alignment:
| Q |
330 |
ataatagcaatggagggtgccaaaaatgggaggatataccaacttgta |
377 |
Q |
| |
|
||||||| ||||| || ||||||||||||||| ||||||||||||||| |
|
|
| T |
19371145 |
ataatagtaatggtggatgccaaaaatgggagtatataccaacttgta |
19371192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 19542952 - 19543177
Alignment:
| Q |
1 |
ttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtat |
100 |
Q |
| |
|
||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| ||| |||||||| | ||||| ||| |||||||||||||| |
|
|
| T |
19542952 |
ttcatggatgactccttcgctatcaacttcaggtgaatttagtcttgaatgggaaccaaagcaacgtgaattggaaatcaagaaaagcggcaaagtgtat |
19543051 |
T |
|
| Q |
101 |
tggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaag |
200 |
Q |
| |
|
|||||||| |||||||||| ||| ||||| | |||| |||||| || ||||||||||| | ||||| | ||||||||||||||||| || |||||| |
|
|
| T |
19543052 |
tggaaaagcggaaaacttagaagaaatgggttattcgtgaacataccggcgaatgttcaacgtgtgtatgaatacattattgtttctaagaaagatgaag |
19543151 |
T |
|
| Q |
201 |
attctttcgcttttgaagttaaagat |
226 |
Q |
| |
|
|||| || ||||| || |||||||| |
|
|
| T |
19543152 |
attcctttacttttaaaattaaagat |
19543177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 296 - 392
Target Start/End: Original strand, 19543241 - 19543337
Alignment:
| Q |
296 |
ggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgagg |
392 |
Q |
| |
|
||||| |||||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
19543241 |
ggagatattggaaatgcagacttgtgttatggatataatatcaacggagggtgccaaaaatgggaggatataccaagttgtagggaacctggtgagg |
19543337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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