View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11291_low_1 (Length: 501)
Name: NF11291_low_1
Description: NF11291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11291_low_1 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0373 (1 HSPs) |
| | |
|
| [»] scaffold0286 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 327; Significance: 0; HSPs: 31)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 4334031 - 4334365
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4334031 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
4334130 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4334131 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
4334230 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4334231 |
tgatttgcttcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcatgaggatgtgcttgat |
4334330 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaacttcttatac |
335 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
4334331 |
gtattgtcagaacatactgtaagaacttcttatac |
4334365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 335
Target Start/End: Complemental strand, 4322625 - 4322291
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
4322625 |
ttaaaaataagctacgatggcttaaatgatgatacagagaaatcaatattccttgacattgcttgtttctttattgggatggatcgaaatgatgtcattc |
4322526 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
| ||||||||||| | |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
4322525 |
atatattaaatggttctggatttttcgcagaaattggaataagtgtccttgttgagagaagccttgtaacggttgatgataagaacaagcttggcatgca |
4322426 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
4322425 |
tgatttgctgcgagatatgggaagggaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcatgatgatgtgcttgat |
4322326 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaacttcttatac |
335 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4322325 |
gtattgtcagaacatactgtaagaacttcatatac |
4322291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 335
Target Start/End: Complemental strand, 4125960 - 4125629
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4125960 |
ttaaaaataagctatgatggtttaaatgat---acagaaaaatcaatattccttgacatagcttgtttcttaattgggatggaccgaaatgatgttattc |
4125864 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||| ||||||||||||||||||||| |
|
|
| T |
4125863 |
ttattttaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgaacgaagccttgtaacagttgatgataagaacaagcttggcatgca |
4125764 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||| |
|
|
| T |
4125763 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtatcatgaggatgtgattgat |
4125664 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaacttcttatac |
335 |
Q |
| |
|
|||||||||||||||| ||||||| ||| ||||| |
|
|
| T |
4125663 |
atattgtcagaacatacggtaagaatttcatatac |
4125629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 4358889 - 4359223
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
4358889 |
ttaaaaataagttatgatggtttaaatgatgatacacagaaagaaatattccttgacatatcttgtttctttattggaatggaccggaatgatgttattc |
4358988 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
|||||| ||||||||||| |||| || | ||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
4358989 |
gtatattagatggctgtggattttttgcaggaattggaataagtgtccttgttgagagaagccttgtaacggttgatgataagaacaagcttggcatgca |
4359088 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||| |||||||||| ||||| |
|
|
| T |
4359089 |
tgatttgctccgagatatgggaagagaaatcattcgtgagaaatcaccaaaggagcctgaggaacatagtaggctgtggtttcatgaggatgtgattgat |
4359188 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaacttcttatac |
335 |
Q |
| |
|
|| |||| ||||||||| ||||||||||| ||||| |
|
|
| T |
4359189 |
gtcttgttagaacataccgtaagaacttcatatac |
4359223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 2 - 335
Target Start/End: Original strand, 4351709 - 4352042
Alignment:
| Q |
2 |
taaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattca |
101 |
Q |
| |
|
||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
4351709 |
taaaaataagctaccatggtttaaatgatgacacggagaaatcaatattccttgacatagcttgtttctttattgggatagacagaaatgatgttatttg |
4351808 |
T |
|
| Q |
102 |
aatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcat |
201 |
Q |
| |
|
||||||||| |||| |||||||| | ||||||||||||| || ||||||||| |||||||||||| || |||| ||| |||||||||||||||||| |
|
|
| T |
4351809 |
tatattaaatagctgcagacttttcacagaaattggaataaaggttcttgttgagagaagccttgtaatcgttgatgataaaaacaagcttggcatgcat |
4351908 |
T |
|
| Q |
202 |
gatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgatg |
301 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
4351909 |
gatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaaaggagcctgaggaacgtagtaggttgtggtttcacggggatgtgcttgatg |
4352008 |
T |
|
| Q |
302 |
tattgtcagaacatactgtaagaacttcttatac |
335 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||| |
|
|
| T |
4352009 |
tattgtcaaaacatactgtaagaacttcatatac |
4352042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 4343420 - 4343743
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4343420 |
ttaaaaataagctacgatggtttaaatgatgatacacagaaagaaatattcctcgacatatcttgtttctttattgggatggatcgaaatgatgttattc |
4343519 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
||| |||||||||||||| ||||||| ||||| || |||||||||||||||||| |||||||||||| ||| |||| ||||||||||||||||||||| |
|
|
| T |
4343520 |
gtatactaaatggctgtggatttttcgcagaaatcggcataagtgtccttgttgagagaagccttgtaatggttgatgataagaacaagcttggcatgca |
4343619 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||| ||| || ||||||||| |
|
|
| T |
4343620 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcgccaaaggagcctgaggaacatagtaggttgtggtttcatgaagacgtgcttgat |
4343719 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaaga |
324 |
Q |
| |
|
|| |||| |||||||||||||||| |
|
|
| T |
4343720 |
gtcttgttagaacatactgtaaga |
4343743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 4 - 335
Target Start/End: Complemental strand, 4135302 - 4134970
Alignment:
| Q |
4 |
aaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaa |
103 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||| | |||||||||||||| |||| |||||||||||||||||||||||| |||||||| | | |
|
|
| T |
4135302 |
aaaataagctatgatggtttaaatgatgacaccgagagagatatattccttgacattgcttttttctttattgggatggaccgaaacgatgttatggata |
4135203 |
T |
|
| Q |
104 |
tattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatga |
203 |
Q |
| |
|
|||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| | |||| ||| ||||||||||| |||||||| |
|
|
| T |
4135202 |
tattaaatggttgtggtctttttgctgaaatcggaataagtgtccttgttgagcgaagccttgtaactattgatgataaaaacaagcttggaatgcatga |
4135103 |
T |
|
| Q |
204 |
tttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgatgta |
303 |
Q |
| |
|
|||||| ||||||||||||||||| ||||| || |||||||||||| | | | ||| | ||||||||||| ||||||| ||||||||| | ||||||| |
|
|
| T |
4135102 |
tttgctacgagatatgggaagagagatcatccgacagaaatcaccaaagaaactcgagaagcgtagtaggttatggtttcatgaggatgttcatgatgta |
4135003 |
T |
|
| Q |
304 |
-ttgtcagaacatactgtaagaacttcttatac |
335 |
Q |
| |
|
|||||| |||| | ||||||||| |||||||| |
|
|
| T |
4135002 |
tttgtcataacaaaatgtaagaacgtcttatac |
4134970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 399 - 496
Target Start/End: Original strand, 4334429 - 4334526
Alignment:
| Q |
399 |
atctcaaactttaaaagcaaaatacatttgtgctgttgttagcgcaaaagctttgaatattagtttggttattaatcattttgtgcatctgtgctcct |
496 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4334429 |
atctcaaactttaaaagcaaaatacatttgtgctgttgttagcgcaaaagctttgaatattagtttggttattaatcattttgtgcttctgtgctcct |
4334526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 305
Target Start/End: Complemental strand, 6547398 - 6547109
Alignment:
| Q |
16 |
gatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggct |
115 |
Q |
| |
|
||||||||||| |||| ||| || ||| |||||||||||| ||||||||||||||||||||||||||| |||||||| || |||||||||||||| | |
|
|
| T |
6547398 |
gatggtttaaaagatgttacagacaaacaaatattccttgatatagcttgtttctttattgggatggacaaaaatgatgcaatacaaatattaaatgggt |
6547299 |
T |
|
| Q |
116 |
gtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatttgctgcgaga |
215 |
Q |
| |
|
|| || |||| ||||| |||||||| | |||||||| ||||||||||||||||| || || || |||||||||| | |||||||||||| || |||| |
|
|
| T |
6547298 |
gtagattttttgctgatattggaattaaagtccttgtagagcgaagccttgtaactgttgacaataggaacaagcttagaatgcatgatttgttgagaga |
6547199 |
T |
|
| Q |
216 |
tatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgatgtatt |
305 |
Q |
| |
|
||||||||| |||| ||| |||| |||| ||| | || || ||| | || |||||||||||| |||||||||| |||||||||||| |
|
|
| T |
6547198 |
catgggaagacaaataatttatgaggaatcgccatttgatccggagaaccgcagtaggttgtggcgccgtgaggatgcgcttgatgtatt |
6547109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 6499857 - 6499634
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||||| |||||| |||||| ||||| |||| ||| |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| || | |
|
|
| T |
6499857 |
ttaaaagtaagctttgatggcttaaaagatgttacagagaaacacatattccttgatatagcttgcttctttattgggatggaccgaaatgatgtaatac |
6499758 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
||||||||||||| |||||| |||| ||||| |||||||| | |||||||| |||||||||||| ||| | || || |||||||||| | ||||| |
|
|
| T |
6499757 |
aaatattaaatgggtgtggattttttgctgatattggaattaaagtccttgtagagcgaagccttttaattattgacaataggaacaagcttagaatgca |
6499658 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaag |
224 |
Q |
| |
|
||||||| || ||||||||||||| |
|
|
| T |
6499657 |
tgatttgttgagagatatgggaag |
6499634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 2 - 279
Target Start/End: Original strand, 6751305 - 6751582
Alignment:
| Q |
2 |
taaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattca |
101 |
Q |
| |
|
||||| |||||| ||||||||||| ||| ||| |||||| |||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
6751305 |
taaaagtaagcttcgatggtttaaagtatgttacggagaaacaaatattccttgatatagcctgtttctttattggaatggaccgaaatgatgtaattca |
6751404 |
T |
|
| Q |
102 |
aatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcat |
201 |
Q |
| |
|
|||||||||||| ||||| |||| ||||| |||||| | |||||| | |||||||| |||||||| || || | |||||||||| | |||||| |
|
|
| T |
6751405 |
aatattaaatgggtgtgggttttttgctgattctggaatgaaagtccttttagagcgaagtcttgtaactgttgacaatgggaacaagcttagaatgcat |
6751504 |
T |
|
| Q |
202 |
gatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtgg |
279 |
Q |
| |
|
|||||| || |||| ||||||||| |||| ||| |||| |||||||| |||| |||||| | || |||||||||||| |
|
|
| T |
6751505 |
gatttgttgagagacatgggaagacaaataatttatgaggaatcaccactggatcctgagaatcgcagtaggttgtgg |
6751582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 2 - 279
Target Start/End: Original strand, 6814232 - 6814509
Alignment:
| Q |
2 |
taaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattca |
101 |
Q |
| |
|
||||| |||||| ||||||||||| ||| ||| |||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||| || | |
|
|
| T |
6814232 |
taaaagtaagcttcgatggtttaaaagattttacagagaaacaaatattccttgatatagcttgtttctttattgggagggaccgaaatgatgtaatacg |
6814331 |
T |
|
| Q |
102 |
aatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcat |
201 |
Q |
| |
|
|||||||||||| |||||| ||| ||||| |||||||| | ||||||||||||||| ||||||||| || || || |||||||||| | |||||| |
|
|
| T |
6814332 |
aatattaaatgggtgtggatattttgctgatattggaattaaagtccttgttgagcgagcccttgtaactgttgacaataggaacaagcttagaatgcat |
6814431 |
T |
|
| Q |
202 |
gatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtgg |
279 |
Q |
| |
|
|||||| |||| ||||||||| |||| ||| |||| |||||||| || |||||| | || |||||||||||| |
|
|
| T |
6814432 |
gatttgtgaagagacatgggaagacaaataatttatgaggaatcaccatcagatcctgagaagcgcagtaggttgtgg |
6814509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 16 - 279
Target Start/End: Original strand, 6674477 - 6674740
Alignment:
| Q |
16 |
gatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggct |
115 |
Q |
| |
|
||||||||||| |||| ||| |||||| |||||||||||| |||||||| |||||||||||||||||||||||||||| || |||||||||||||| | |
|
|
| T |
6674477 |
gatggtttaaaagatgttacagagaaacaaatattccttgatatagcttgcttctttattgggatggaccgaaatgatgcaatacaaatattaaatgggt |
6674576 |
T |
|
| Q |
116 |
gtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatttgctgcgaga |
215 |
Q |
| |
|
|| | |||| ||||| |||||||| | |||||| | |||||||||||| |||| || || || |||||||||| | ||||||||||| || |||| |
|
|
| T |
6674577 |
gtcaattttttgctgatattggaattaaagtccttttagagcgaagccttctaactgttgacaataggaacaagcttagaatgcatgatttattgagaga |
6674676 |
T |
|
| Q |
216 |
tatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtgg |
279 |
Q |
| |
|
||||||||| |||| || |||| |||||||| | || |||||| | || |||||||||||| |
|
|
| T |
6674677 |
catgggaagacaaataatatatgaggaatcaccatttgatcctgagaaccgcagtaggttgtgg |
6674740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 10 - 207
Target Start/End: Original strand, 6649521 - 6649718
Alignment:
| Q |
10 |
agctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaa |
109 |
Q |
| |
|
|||| |||||||||||| |||| || |||||| |||||||||||| || ||||||||||||||||| |||||||||||||||| || |||||||||| |
|
|
| T |
6649521 |
agctttgatggtttaaaagatgtaacagagaaacaaatattccttgatattgcttgtttctttattggaatggaccgaaatgatgcaatacaaatattaa |
6649620 |
T |
|
| Q |
110 |
atggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatttg |
207 |
Q |
| |
|
|||| ||||| |||| ||||| |||||||| | |||||||| ||| ||||||||||||| || || || |||||||||| | |||||||||||| |
|
|
| T |
6649621 |
atgggagtggattttttgctgatattggaattaaagtccttgtagagagaagccttgtaactgttgacaataggaacaagcttagaatgcatgatttg |
6649718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 279
Target Start/End: Original strand, 6834632 - 6834903
Alignment:
| Q |
8 |
taagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatatt |
107 |
Q |
| |
|
|||||| |||||||||||| |||| ||| ||| || |||||| || || ||||| |||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
6834632 |
taagctttgatggtttaaaagatgttacagagcaacaaatatttctcgatatagcctgtttctttattgggatggaccaaaatgatgtaattcaaatatt |
6834731 |
T |
|
| Q |
108 |
aaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatttg |
207 |
Q |
| |
|
|||||| ||||| |||| ||||| |||||| | ||||| | ||||||||||||||||| || || | |||||||||| | ||||||||||| |
|
|
| T |
6834732 |
aaatgggtgtgggttttttgctgattctggaatgaaaatccttttagagcgaagccttgtaactgttgacaatgggaacaagcttagagtgcatgatttg |
6834831 |
T |
|
| Q |
208 |
ctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtgg |
279 |
Q |
| |
|
|| |||| ||||||||| |||| ||| |||| ||||||| |||| |||||| | || |||||||||||| |
|
|
| T |
6834832 |
ttgagagacatgggaagacaaataatttatgaggaatcaccgttggatcctgagaaccgcagtaggttgtgg |
6834903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 4 - 167
Target Start/End: Original strand, 25568476 - 25568639
Alignment:
| Q |
4 |
aaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaa |
103 |
Q |
| |
|
|||||||||||||||| | |||||||||||||| || || |||||||| ||||||||||||||||||||||| ||| ||||||| |||| || || | |
|
|
| T |
25568476 |
aaaataagctatgatgctctaaatgatgatactcaggaagatatattcctcaacatagcttgtttctttattgggttggtccgaaataatgtaatacata |
25568575 |
T |
|
| Q |
104 |
tattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgt |
167 |
Q |
| |
|
|||| ||||| |||| ||||| || ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
25568576 |
tattgaatggttgtgaactttatgcagaaattggaataaacgtccttgttgagcgaagccttgt |
25568639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 279
Target Start/End: Original strand, 6756966 - 6757200
Alignment:
| Q |
45 |
aatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaataagt |
144 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| |||| |||||||||| || |||||||||||||| |||||| |||| ||||| |||||||| | |
|
|
| T |
6756966 |
aatattccttgatatagcttgtttctttattgggaaggacagaaatgatgtaatacaaatattaaatgggtgtggattttttgctgatattggaattaaa |
6757065 |
T |
|
| Q |
145 |
gtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatttgctgcgagatatgggaagagaaatcattcgtgagaaat |
244 |
Q |
| |
|
|| ||||| ||| ||| ||||||||| || || | |||||||||| | ||||||| |||| || |||| ||||||||| |||| || |||| ||| |
|
|
| T |
6757066 |
gttcttgtagagtgaacccttgtaaccgttgacaacaggaacaagcttagaatgcatggtttgttgagagacatgggaagacaaataatctttgaggaat |
6757165 |
T |
|
| Q |
245 |
caccaatggagcctgaggaacgtagtaggttgtgg |
279 |
Q |
| |
|
|||| | || |||||| | ||||||||| ||||| |
|
|
| T |
6757166 |
caccgtttgatcctgagaagcgtagtaggctgtgg |
6757200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 6794916 - 6795130
Alignment:
| Q |
16 |
gatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggct |
115 |
Q |
| |
|
||||||||||| ||| |||||||||| |||||| ||||| |||||||| ||||||||||||||||| | |||||||| ||||||||||||||||| | |
|
|
| T |
6794916 |
gatggtttaaaagattttactgagaaacaaatatttcttgatatagcttgcttctttattgggatggatcaaaatgatgcaattcaaatattaaatgggt |
6795015 |
T |
|
| Q |
116 |
gtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatttgctgcgaga |
215 |
Q |
| |
|
||||| |||| ||||| |||||||| | || |||||||| || ||||||||| || || ||| ||||||||| | |||||||||||| | |||| |
|
|
| T |
6795016 |
gtggattttttgctgatattggaattaaagttcttgttgaaagagcccttgtaactgttgacaataataacaagcttagaatgcatgatttgttaagaga |
6795115 |
T |
|
| Q |
216 |
tatgggaagagaaat |
230 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
6795116 |
catgggaagacaaat |
6795130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 2 - 305
Target Start/End: Complemental strand, 6623938 - 6623635
Alignment:
| Q |
2 |
taaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattca |
101 |
Q |
| |
|
||||| |||||| |||||||||||| |||| ||| ||| || |||||||||||| ||||| |||||||| ||||| ||||| |||||||| || | |
|
|
| T |
6623938 |
taaaagtaagctttgatggtttaaaagatgttacagagcaacaaatattccttgatatagcctgtttcttgattggaatggataaaaatgatgcaataaa |
6623839 |
T |
|
| Q |
102 |
aatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcat |
201 |
Q |
| |
|
|||||||||||| ||||| |||| || || |||||||| | |||||||| ||||||||||||||||| || || || |||||||||| | |||||| |
|
|
| T |
6623838 |
aatattaaatgggtgtgggttttttgcggatattggaattaaagtccttgtagagcgaagccttgtaactgttgacaataggaacaagcttagaatgcat |
6623739 |
T |
|
| Q |
202 |
gatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgatg |
301 |
Q |
| |
|
|| ||| || ||||||||||||| |||| || ||| |||||||| | || |||||| | || |||||||||||| |||||||| ||| ||||| |
|
|
| T |
6623738 |
gacttgttgagagatatgggaaggcaaataatctatgaagaatcaccatttgatcctgagaaccgcagtaggttgtggcgccgtgaggaagtgtatgatg |
6623639 |
T |
|
| Q |
302 |
tatt |
305 |
Q |
| |
|
|||| |
|
|
| T |
6623638 |
tatt |
6623635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 279
Target Start/End: Complemental strand, 6589531 - 6589269
Alignment:
| Q |
17 |
atggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctg |
116 |
Q |
| |
|
|||||||||| ||| ||| |||||| |||||||||||| || |||||||||||||||||||||||| ||| ||||| || || ||||||||||| || |
|
|
| T |
6589531 |
atggtttaaaagattttacagagaaacaaatattccttgatattgcttgtttctttattgggatggacaaaaaggatgtaatacagatattaaatggttg |
6589432 |
T |
|
| Q |
117 |
tggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatttgctgcgagat |
216 |
Q |
| |
|
||| |||| ||||| ||||| || | || |||||||||||| ||||||||| || || || ||||||||| | ||||||||| || | ||||| |
|
|
| T |
6589431 |
tgggttttttgctgatattgggattaaagttcttgttgagcgagcccttgtaactgttgacaataggaacaagctaagaatgcatgatctgttaagagat |
6589332 |
T |
|
| Q |
217 |
atgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtgg |
279 |
Q |
| |
|
||||||||| |||| ||| |||| || ||||| || |||||| | || |||||||||||| |
|
|
| T |
6589331 |
atgggaagacaaataatttatgaggaagcaccatcagatcctgagaagcgcagtaggttgtgg |
6589269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 6771681 - 6771821
Alignment:
| Q |
19 |
ggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtg |
118 |
Q |
| |
|
|||||||| ||| ||| |||||| |||||||||||| ||||||||||||||||||||| | ||| ||| ||||| || |||||||||||||| |||| |
|
|
| T |
6771681 |
ggtttaaaagattatatggagaaacaaatattccttgatatagcttgtttctttattggggtagacaaaaaggatgtaatacaaatattaaatgggtgtg |
6771780 |
T |
|
| Q |
119 |
gacttttcgctgaaattggaataagtgtccttgttgagcga |
159 |
Q |
| |
|
|| |||| ||||| |||||||| | |||||| |||||||| |
|
|
| T |
6771781 |
gattttttgctgatattggaattaaagtccttcttgagcga |
6771821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 249
Target Start/End: Original strand, 6726391 - 6726638
Alignment:
| Q |
2 |
taaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattca |
101 |
Q |
| |
|
||||| |||||| | |||||||||| || ||| |||||| |||||| ||||| ||||||||||||||||||||||||||| ||| |||| || || |
|
|
| T |
6726391 |
taaaagtaagctttcatggtttaaaacattttacagagaaacaaatatttcttgatatagcttgtttctttattgggatggacaaaaaggatgcgatcca |
6726490 |
T |
|
| Q |
102 |
aatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcat |
201 |
Q |
| |
|
|||||| ||||| ||||| |||| ||||| |||||| | |||||||||||| || ||||||||| || || | ||||||| ||| | |||||| |
|
|
| T |
6726491 |
aatattgaatgggtgtgggttttttgctgatgatggaattaaagtccttgttgagagagcccttgtaactgttgacaatgagaacaaacttagaatgcat |
6726590 |
T |
|
| Q |
202 |
gatttgctgcgagatatgggaagagaaatcattcgtgagaaatcacca |
249 |
Q |
| |
|
|||||| || |||| |||||||| |||||||| |||| |||||||| |
|
|
| T |
6726591 |
gatttgttgagagacatgggaaggcaaatcatttttgaggaatcacca |
6726638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 6714275 - 6714387
Alignment:
| Q |
8 |
taagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatatt |
107 |
Q |
| |
|
|||||| |||||||||||| |||| ||| |||||| ||||||| |||| || |||||||||||||| ||||||||| ||||||| | || |||||||| |
|
|
| T |
6714275 |
taagctttgatggtttaaaagatgttacagagaaacaaatattctttgatattgcttgtttctttatcgggatggacaaaaatgatataatacaaatatt |
6714374 |
T |
|
| Q |
108 |
aaatggctgtgga |
120 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
6714375 |
aaatgggtgtgga |
6714387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 305
Target Start/End: Complemental strand, 6535157 - 6534858
Alignment:
| Q |
6 |
aataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaata |
105 |
Q |
| |
|
|||||| | |||||||||||| |||| ||| ||| || |||||||||||| ||||| |||||||| ||||| ||||| || ||||| || ||||| |
|
|
| T |
6535157 |
aataagttttgatggtttaaaagatgttacagagcaacaaatattccttgatatagcctgtttcttgattggaatggataaaactgatgcaataaaaata |
6535058 |
T |
|
| Q |
106 |
ttaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatt |
205 |
Q |
| |
|
|||||||| ||||| |||| ||||| ||||| | | ||||| || |||||||||||||| || || || || ||||| ||| | |||||||||| |
|
|
| T |
6535057 |
ttaaatgggtgtgggttttttgctgatgttggagttaaagtcctggtagagcgaagccttgttactgttgacaatagaaacaaacttagaatgcatgatt |
6534958 |
T |
|
| Q |
206 |
tgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgatgtatt |
305 |
Q |
| |
|
|| || |||| |||||||| | || ||| |||| |||||||| |||| |||||| | || |||||||||||| ||||||||| | ||||||| |||| |
|
|
| T |
6534957 |
tgttgagagacatgggaaggcagataatttatgaggaatcaccattggatcctgagaaccgaagtaggttgtggcgtcgtgaggaagcgcttgatatatt |
6534858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 427 - 468
Target Start/End: Original strand, 4352152 - 4352193
Alignment:
| Q |
427 |
tgtgctgttgttagcgcaaaagctttgaatattagtttggtt |
468 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4352152 |
tgtgctgttgttagcgcaaaagctttcaatattagtttggtt |
4352193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 432 - 484
Target Start/End: Original strand, 4359343 - 4359395
Alignment:
| Q |
432 |
tgttgttagcgcaaaagctttgaatattagtttggttattaatcattttgtgc |
484 |
Q |
| |
|
|||||||||| || ||| ||||||||||||||||||| | ||||||||||||| |
|
|
| T |
4359343 |
tgttgttagcacagaagttttgaatattagtttggttgtgaatcattttgtgc |
4359395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 6501983 - 6501917
Alignment:
| Q |
45 |
aatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaat |
111 |
Q |
| |
|
||||||| |||||||||| ||||||||||| |||||| || ||||||||| |||||| ||||||| |
|
|
| T |
6501983 |
aatattctttgacatagcatgtttctttatcgggatgagccaaaatgatgtacttcaaacattaaat |
6501917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 6592897 - 6592831
Alignment:
| Q |
45 |
aatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaat |
111 |
Q |
| |
|
|||||||||||| ||||| ||| ||||| |||||||| ||| ||||||||| | |||||||||||| |
|
|
| T |
6592897 |
aatattccttgatatagcatgtctctttgttgggatgaacctaaatgatgtaaagcaaatattaaat |
6592831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 468
Target Start/End: Complemental strand, 4322170 - 4322126
Alignment:
| Q |
423 |
catttgtgctgttgttagcgcaaaagctttgaatattagtttggtt |
468 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
4322170 |
catttgttctgttgttagcacaaaagctttgaat-ttagtttggtt |
4322126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 432 - 484
Target Start/End: Original strand, 4343880 - 4343932
Alignment:
| Q |
432 |
tgttgttagcgcaaaagctttgaatattagtttggttattaatcattttgtgc |
484 |
Q |
| |
|
|||||||||| || ||| ||||||||||||||||||| | ||||| ||||||| |
|
|
| T |
4343880 |
tgttgttagcacagaagttttgaatattagtttggttgtgaatcagtttgtgc |
4343932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 7888261 - 7888181
Alignment:
| Q |
6 |
aataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccg |
86 |
Q |
| |
|
|||||| | ||||||||||| ||||||| || |||| ||||||||||| || |||| |||||||||||| |||||||| |
|
|
| T |
7888261 |
aataagttttgatggtttaagtgatgatgatgtgaaagatatattccttgatattgcttttttctttattggtatggaccg |
7888181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 22)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 5342173 - 5342497
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
5342173 |
ttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatac |
5342272 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||| || || | |||||||| ||||| ||||| |
|
|
| T |
5342273 |
aaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagccttgtaattgttgacagcaagaacaaacttggaatgca |
5342372 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||| ||||| |||||||| ||| ||||||||||||||| |
|
|
| T |
5342373 |
cgatttgctgcgagatatgggaagagaaatcgttcgtgagaaatcaccaaaggagcttggggagcgtagcaggttgtgctttaaggaggatgtgcttgat |
5342472 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaa |
325 |
Q |
| |
|
||||| |||||||| || ||||||| |
|
|
| T |
5342473 |
gtattatcagaacaaaccgtaagaa |
5342497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 5094520 - 5094848
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| | ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||| | |
|
|
| T |
5094520 |
ttaagaataagctatgatgctttaaatgatgacattgagaaagaaatattccttgatgtagcttgtttctttattgggatggaccgaaatgacgttacac |
5094619 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| || |||||||| || |||| ||||||||| ||||| ||||| |
|
|
| T |
5094620 |
ttatattaaatggatgtggactttttgctgaaattggaataagtatccttgttgagcgtagtcttgtaactgttgatgataagaacaaacttggaatgca |
5094719 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| | ||||||||||||| ||| ||||||||| || |
|
|
| T |
5094720 |
tgatttgttgcgagatatgggaagagaaatcattcgtgagaaatcaccagaggagctcgaggagcgttgcaggttgtggtttcatgatgatgtgcttcat |
5094819 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaacttc |
329 |
Q |
| |
|
||||| |||||||| |||||||||||||| |
|
|
| T |
5094820 |
gtattatcagaacaaactgtaagaacttc |
5094848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 5424232 - 5424560
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||| | |
|
|
| T |
5424232 |
ttaagaataagctatgatgctttaaatgatgatactgagaaagaaatattccttgacatagcttgtttctttattggaatggacagaaatgatgttacac |
5424331 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| || ||||| || || |||| ||| ||||| ||||| ||||| |
|
|
| T |
5424332 |
ttatattaaatggatgtggactttttgctgaaattggaataagtatccttgttgagcggagtcttgtcactgttgatgataataacaaacttggaatgca |
5424431 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||| | ||||||||||||| ||||||||||||| || |
|
|
| T |
5424432 |
tgatttgttgcgagatatgggaagagaaatcattcgtgggaaatcaccagaagagctcgaggagcgttgcaggttgtggtttcatgaggatgtgcttcat |
5424531 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaacttc |
329 |
Q |
| |
|
||||| ||||| || |||||||||||||| |
|
|
| T |
5424532 |
gtattatcagatcaaactgtaagaacttc |
5424560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 5104395 - 5104067
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||| | ||||||| ||||||||| || |||||||||||||||||||||||||||||||||| |||| | |
|
|
| T |
5104395 |
ttaagaataagctacgatggtttaaatgatgacattgagaaagaaatattcctcgatgtagcttgtttctttattgggatggaccgaaatgacgttacac |
5104296 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
|||||| |||| ||||||||||| || ||||||||||||||| |||||||||||||||| ||| |||| || |||| ||||||||| ||||| ||||| |
|
|
| T |
5104295 |
ttatattagatggatgtggactttttgcagaaattggaataagtatccttgttgagcgaagtcttataactgttgatgataagaacaaacttggaatgca |
5104196 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| | ||||||||||||| ||| ||||||||| || |
|
|
| T |
5104195 |
tgatttgttgcgagatatgggaagagaaatcattcgtgagaaatcaccagaggagctcgaggagcgttgcaggttgtggtttcatgacgatgtgcttcat |
5104096 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaacttc |
329 |
Q |
| |
|
||||||||||||||||| ||||||||||| |
|
|
| T |
5104095 |
gtattgtcagaacatacggtaagaacttc |
5104067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 2 - 335
Target Start/End: Complemental strand, 5356138 - 5355805
Alignment:
| Q |
2 |
taaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattca |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| || | |
|
|
| T |
5356138 |
taaaaataagctatgatggtttaaatgatgatgccgagaaagaaatatttcttgacatagcttgtttctttattgggatcgaccgaaatgatgctacact |
5356039 |
T |
|
| Q |
102 |
aatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcat |
201 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||||||||| | ||||||||||||||||||||||| || |||| |||||| | |||| | |||||| |
|
|
| T |
5356038 |
aatattaaatggatgtggactttatgctgaaattggaataagtattcttgttgagcgaagccttgtaactgttgatgataagaataggcttagaatgcat |
5355939 |
T |
|
| Q |
202 |
gatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgatg |
301 |
Q |
| |
|
|||||||| |||||||||||||||||| || |||||||||||||||| ||| ||||||| |||||| || |||||| ||| ||| ||||||||||||| |
|
|
| T |
5355938 |
gatttgctacgagatatgggaagagaagtcgttcgtgagaaatcaccggaggaccctgaggcacgtagcagattgtggcttcatgatgatgtgcttgatg |
5355839 |
T |
|
| Q |
302 |
tattgtcagaacatactgtaagaacttcttatac |
335 |
Q |
| |
|
| || ||||| || ||||||||||||| ||||| |
|
|
| T |
5355838 |
ttttatcagatcaatctgtaagaacttcatatac |
5355805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 5368939 - 5369267
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
5368939 |
ttaagaataagctatgatgctttaaatgatgattatgagaaagaaatattccttgatgtagcttgtttctttattgggaaggaccgaaatgatgttacac |
5369038 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
|||||| |||| ||||||||||| |||||||||||||||||| |||||||||||||||| ||||| || || |||| ||||||||| ||||| ||||| |
|
|
| T |
5369039 |
ttatattagatggatgtggactttttgctgaaattggaataagtatccttgttgagcgaagtcttgtcactgttgatgataagaacaaacttggaatgca |
5369138 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||| | ||||||||||||| ||||||||||||| || |
|
|
| T |
5369139 |
tgatttgttgcgagatatgggaagagaaatcattcgtgggaaatcaccagaagagctcgaggagcgttgcaggttgtggtttcatgaggatgtgcttcat |
5369238 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaacttc |
329 |
Q |
| |
|
||||| ||||| || ||||||||| |||| |
|
|
| T |
5369239 |
gtattatcagatcaaactgtaagatcttc |
5369267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 5068597 - 5068269
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
5068597 |
ttaagaataagctatgatgctttaaatgatgatactgagaaagaaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttacac |
5068498 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
||||||||||| || |||||||| |||||||||||||||||| |||||||||||||||| || || | || ||| |||||||| ||||| ||||| |
|
|
| T |
5068497 |
ttatattaaatggatgcggactttttgctgaaattggaataagtatccttgttgagcgaagtctggttattgttgataaaaagaacaaacttggaatgca |
5068398 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||||| |||||||||| |||| ||||| ||| | ||||||||||||| ||||||| |||| | |
|
|
| T |
5068397 |
tgatttgttgcgagatatgggaagagaaatcgttcgtgggaaatcaccagaagagctcgaggagcgttgcaggttgtggtttcaggaggatgcgcttcaa |
5068298 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaacttc |
329 |
Q |
| |
|
||||| |||||||| |||||||||||||| |
|
|
| T |
5068297 |
gtattatcagaacaaactgtaagaacttc |
5068269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 5075254 - 5074931
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
5075254 |
ttaaaaataagctatgatggtttaaacgatgacactgagaagaaaatattcctcgacatagcttgtttctttattgggatggatcgaaatgatgttacac |
5075155 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
||||||||||| |||| |||||| |||||||||||| ||||||| ||||||||||||||||||||||| ||||||| || |||||||||||| ||||| |
|
|
| T |
5075154 |
ttatattaaatggatgtgaactttttgctgaaattggagtaagtgtacttgttgagcgaagccttgtaactgtcgatgataggaacaagcttggaatgca |
5075055 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| |||||| | |||||||||| ||||| || || |||||| | |||| ||| ||||| |
|
|
| T |
5075054 |
tgatttgctgcgtgatatgggaagagaaatcattcgtgaaaaatcagaa---gagcctgaggggcgtagcagattatggtttgataaggacgtgtttgat |
5074958 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaact |
327 |
Q |
| |
|
||||| |||||||| | |||||||||| |
|
|
| T |
5074957 |
gtattatcagaacaaaatgtaagaact |
5074931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 5395522 - 5395846
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||| | ||||||||||| | |
|
|
| T |
5395522 |
ttaaaaataagctatgatgctttaaatgatgacactgagaaagaaatattccttgacatagcttgtttttttattgggatggacaggaatgatgttatac |
5395621 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
| ||||||||||| | | |||||| || ||||||||| ||||||||||||||||||||||||||||||| || |||| || ||||| |||| ||||| |
|
|
| T |
5395622 |
atatattaaatggtagcgaactttttgcagaaattggagtaagtgtccttgttgagcgaagccttgtaactgttgatgataggaacagacttgcaatgca |
5395721 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||| ||||| ||||| |||||||||||| | | || ||||| ||| |
|
|
| T |
5395722 |
tgatttgctaagagatatgggaagagaaatcgttcgtgagaagtcaccaaaagagcccgaggagcgtagcaggttgtggtttaataatgacgtgctggat |
5395821 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaa |
325 |
Q |
| |
|
||||| |||||||| |||||||||| |
|
|
| T |
5395822 |
gtattatcagaacaaactgtaagaa |
5395846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 5175345 - 5175679
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
5175345 |
ttaaaaataagctatgatggtttagacgatgattaccagaaatcaatattcctcgacgtagcttgtttctttattgggatggacagaaatgatgttatac |
5175444 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
| |||||||||||||||||| |||| || ||| ||||||||||||||| |||||||||||| | |||||||| ||| ||| ||||||||||| ||||| |
|
|
| T |
5175445 |
atatattaaatggctgtggattttttgcagaagatggaataagtgtcctggttgagcgaagcttagtaacggttgataataaaaacaagcttggaatgca |
5175544 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
| ||||| |||| ||||||||||||||||||||| || | ||| ||| ||||||||||||||| ||||| ||||||||||||| ||||||||| |||| |
|
|
| T |
5175545 |
taatttgttgcgggatatgggaagagaaatcatttgtaataaaccacgaatggagcctgaggagcgtagcaggttgtggtttcttgaggatgttgatgat |
5175644 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaacttcttatac |
335 |
Q |
| |
|
|| || ||| ||| || ||||||||||||||||| |
|
|
| T |
5175645 |
gtgttagcaggacaaaccgtaagaacttcttatac |
5175679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 5382128 - 5382424
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |
|
|
| T |
5382128 |
ttaaaaataagctatgatggtttaaatgacgatagcgaaaaagaaatattccttgacatagcttgtttctttattgg-atggaccgaaacgatgttacac |
5382226 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
||||||||||||| ||||| ||||| ||||| || ||||||||||||||||||||| ||||||||||||| ||||||| |||||| | ||||| ||||| |
|
|
| T |
5382227 |
aaatattaaatgggtgtgggctttttgctgatatcggaataagtgtccttgttgagagaagccttgtaactgtcgatgataagaatacacttggaatgca |
5382326 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttg |
298 |
Q |
| |
|
||||||| | | |||||||||||||||||||||||||| |||||||||| ||| |||||||| ||||| ||||| ||||||| ||||||||| |||| |
|
|
| T |
5382327 |
tgatttgttaagggatatgggaagagaaatcattcgtgaaaaatcaccaaaggatcctgaggagcgtagcaggttatggtttcatgaggatgtccttg |
5382424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 5277172 - 5277464
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
5277172 |
ttaaaaataagctatgatggtttagacgatgattaccagaaatcaatattcctcgacgtagcttgtttctttattgggatggacagaaatgatgttatac |
5277271 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
| |||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||| | |||||||| ||| ||| ||||||||||| ||||| |
|
|
| T |
5277272 |
atatattaaatggctgtggattttttgcagaagatggaataagtgtccttgttgagcgaagcttagtaacggttgataataaaaacaagcttggaatgca |
5277371 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgt |
293 |
Q |
| |
|
| ||||| |||| ||||||||||||||||||||| || | ||| ||| ||||||||||||||| ||||| ||||||||||||| ||||||||| |
|
|
| T |
5277372 |
taatttgttgcgggatatgggaagagaaatcatttgtaataaaccacgaatggagcctgaggagcgtagcaggttgtggtttcttgaggatgt |
5277464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 6 - 329
Target Start/End: Complemental strand, 5159019 - 5158696
Alignment:
| Q |
6 |
aataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaata |
105 |
Q |
| |
|
||||||||| |||| |||||||||||| ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||| |||| | ||| |
|
|
| T |
5159019 |
aataagctacgatgctttaaatgatgactttgagaaagaaatattccttgatgtagcttgtttctttatagggatggaccgaaatgacgttacacttata |
5158920 |
T |
|
| Q |
106 |
ttaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatt |
205 |
Q |
| |
|
|||||||| |||| |||||| | ||||||||||||||| ||||||||||||| || ||||| || || |||||||||||||| ||||| |||||||||| |
|
|
| T |
5158919 |
ttaaatggatgtgaactttttggtgaaattggaataagcatccttgttgagcgtagtcttgttactgttgatggtaagaacaaacttggaatgcatgatt |
5158820 |
T |
|
| Q |
206 |
tgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgatgtatt |
305 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||| | ||||||||||||| ||| ||||||||| ||||||| |
|
|
| T |
5158819 |
tgttgcgagatatgggaagagaaatcattcgtgagaaatcaccagaggagatcgaggagcgttgcaggttgtggtttcatgacgatgtgcttcatgtatt |
5158720 |
T |
|
| Q |
306 |
gtcagaacatactgtaagaacttc |
329 |
Q |
| |
|
|||||||| |||||||||||||| |
|
|
| T |
5158719 |
atcagaacaaactgtaagaacttc |
5158696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 5348854 - 5349184
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||| ||||||||| |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
5348854 |
ttaagaataagctacgatgctttgaatgatgatactgagaaagaaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttacac |
5348953 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgc- |
199 |
Q |
| |
|
||||||||||| |||| |||||| |||||||||||||||||| || ||||||| ||||| ||||| || || |||| ||||||||| ||||| |||| |
|
|
| T |
5348954 |
ttatattaaatggatgtgaactttttgctgaaattggaataagtatctttgttgatcgaagtcttgtcactgttgatgataagaacaaacttggaatgca |
5349053 |
T |
|
| Q |
200 |
-atgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttg |
298 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||| | ||||| ||||||| |||||||||||| |
|
|
| T |
5349054 |
tatgatttgttgcgagatatgggaagagaaatcattcgtgggaaatcaccagaagagctcgaggagcgttgcaggttctggtttcaggaggatgtgcttc |
5349153 |
T |
|
| Q |
299 |
atgtattgtcagaacatactgtaagaacttc |
329 |
Q |
| |
|
|||| || ||||| || |||||||||||||| |
|
|
| T |
5349154 |
atgttttatcagatcaaactgtaagaacttc |
5349184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 333
Target Start/End: Complemental strand, 5133427 - 5133096
Alignment:
| Q |
2 |
taaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattca |
101 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||| ||||||| |||||||||| ||||||||||||| ||||||| |||||| ||||||||||| || |
|
|
| T |
5133427 |
taaaaataagctatgatgctttaaatgaagatattgagaaagaaatattccttaacatagcttgtttttttattgatatggacacaaatgatgttacaca |
5133328 |
T |
|
| Q |
102 |
aatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcat |
201 |
Q |
| |
|
||||||||||| ||||||||||| || ||||||||||||||| | ||| ||||| ||||||||||||| || |||| |||| ||| |||||| |||||| |
|
|
| T |
5133327 |
tatattaaatggttgtggactttttgccgaaattggaataagtattcttattgagagaagccttgtaactgttgatgctaaggacaggcttggaatgcat |
5133228 |
T |
|
| Q |
202 |
gatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgatg |
301 |
Q |
| |
|
|||||| || ||||||||||||||||||| |||||||| ||||||| || | |||||| ||| | || ||||||||| |||||||||||||||| |
|
|
| T |
5133227 |
gatttgttgagagatatgggaagagaaattattcgtgaagaatcaccggaggtgtttgaggagcgttgcagactgtggtttcacgaggatgtgcttgatg |
5133128 |
T |
|
| Q |
302 |
tattgtcagaacatactgtaagaacttcttat |
333 |
Q |
| |
|
|| | ||| |||| || ||||||||||||||| |
|
|
| T |
5133127 |
tactatcaaaacaaacagtaagaacttcttat |
5133096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 5183475 - 5183165
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||||||||||||| |||| | ||| |||||| || |||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||| | |
|
|
| T |
5183475 |
ttaaaaataagctacgatgctctaagtgatgacaccgagaaagaaatattccttgacatagcttgtttctttattgggatggacaggaatgatgttatac |
5183376 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
| ||||||||||| | | | |||| || ||||||||| ||||||||||||||||| ||||||||||||| || |||| || |||||| || ||||| |
|
|
| T |
5183375 |
atatattaaatggtagcgaattttttgcagaaattggagtaagtgtccttgttgagagaagccttgtaactgttgatgataggaacaaactgcaaatgca |
5183276 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||| ||||| |||||||||||| |||||||| |||| |
|
|
| T |
5183275 |
tgatttgctaagagatatgggaagagaaatcgttcgtgagaagtcaccaaaagagcctgaggagcgtagcaggttgtggtttaacaaggatgtgattgac |
5183176 |
T |
|
| Q |
301 |
gtattgtcaga |
311 |
Q |
| |
|
||||| ||||| |
|
|
| T |
5183175 |
gtattatcaga |
5183165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 5148482 - 5148154
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
||||||||||||||||| | ||||||||||| | || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
5148482 |
ttaaaaataagctatgacgatttaaatgatgttcttgtgaaagaaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgtcatac |
5148383 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
| |||||||||||||||| ||||| || ||||||||||||| |||||| | |||||||||||||| || || |||| || ||| |||||| ||||| |
|
|
| T |
5148382 |
atatattaaatggctgtgaactttatgcagaaattggaataaatgtcctactggagcgaagccttgtgactgttgatgatatgaatcggcttggaatgca |
5148283 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
||||||| ||||||| |||| |||||||||||| || ||| ||||||||| ||| |||| | || ||||| ||||||||| || |||||||||| || |
|
|
| T |
5148282 |
tgatttgttgcgagacatggcaagagaaatcatacgcgaggaatcaccaaaagaggttgagaatcggagtagattgtggtttagtacggatgtgcttaat |
5148183 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaacttc |
329 |
Q |
| |
|
|| || || ||||| |||||||| ||||| |
|
|
| T |
5148182 |
gtgttatctgaacaaactgtaagtacttc |
5148154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 45 - 324
Target Start/End: Complemental strand, 5261625 - 5261346
Alignment:
| Q |
45 |
aatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaataagt |
144 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||||| |||||||||| || |||||||||||||| |
|
|
| T |
5261625 |
aatatttcttgacatagcttgtttcttaattggaatggaccgaaatgatgttatactcgtattaaatgactgtggacttcatgcagaaattggaataagc |
5261526 |
T |
|
| Q |
145 |
gtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatttgctgcgagatatgggaagagaaatcattcgtgagaaat |
244 |
Q |
| |
|
|||||||||||| |||||||||| | || |||| |||||||| |||||| ||||||| |||| |||||||||||||||||||||| |||||||| ||| |
|
|
| T |
5261525 |
gtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaat |
5261426 |
T |
|
| Q |
245 |
caccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgatgtattgtcagaacatactgtaaga |
324 |
Q |
| |
|
|||||| | ||||||| ||||||| |||||||| || ||||||||| |||||||||| ||| |||| ||||||||| |
|
|
| T |
5261425 |
caccaaggaggcctgagaaacgtagcaggttgtgtgatcaggaggatgtgattgatgtattatcaaaacaaactgtaaga |
5261346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 13 - 328
Target Start/End: Original strand, 5445571 - 5445883
Alignment:
| Q |
13 |
tatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatg |
112 |
Q |
| |
|
||||||||||||||| ||| |||||||| |||||||||| |||| |||||||||||| | |||||||||| |||||||||||| | ||||||||| |
|
|
| T |
5445571 |
tatgatggtttaaatcatg---ctgagaaagaaatattccttcacattgcttgtttctttgtcgggatggaccaaaatgatgttatacttttattaaatg |
5445667 |
T |
|
| Q |
113 |
gctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatttgctgcg |
212 |
Q |
| |
|
|| ||||||| || ||||||||||||||||||||||||| ||||||||||| || || |||| |||||||| |||||| ||||||| | |||||| |
|
|
| T |
5445668 |
attgcggactttctgcagaaattggaataagtgtccttgttgctcgaagccttgtgactgttgatgataagaacatgcttggaatgcatggtcagctgcg |
5445767 |
T |
|
| Q |
213 |
agatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgatgtattgtcagaa |
312 |
Q |
| |
|
|||||||||||||| |||| || ||||| ||||||||| | ||||||| ||||||||||||||||| || ||||||||| |||||||||| ||| | |
|
|
| T |
5445768 |
agatatgggaagaggaatcgtttgtgaggaatcaccaaggaggcctgagaaacgtagtaggttgtgggatcaggaggatgtgattgatgtattatcaaga |
5445867 |
T |
|
| Q |
313 |
catactgtaagaactt |
328 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
5445868 |
caaactgtaagaactt |
5445883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 45 - 305
Target Start/End: Complemental strand, 5285622 - 5285364
Alignment:
| Q |
45 |
aatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaataagt |
144 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| |||||| ||||||||||||| | ||||||||| ||||||||||| || |||||||||||||| |
|
|
| T |
5285622 |
aatattccttgaca--gcttgtttcttaattggaatggacagaaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagc |
5285525 |
T |
|
| Q |
145 |
gtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatttgctgcgagatatgggaagagaaatcattcgtgagaaat |
244 |
Q |
| |
|
|||||||||||| |||||||||| | || |||| |||||||| |||||| ||||||| ||||||||||||||||||||||| ||| |||||||| ||| |
|
|
| T |
5285524 |
gtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatgggaagaggaattgttcgtgaggaat |
5285425 |
T |
|
| Q |
245 |
caccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgatgtatt |
305 |
Q |
| |
|
|||||| | ||||||| ||||||| |||||||||| || ||||||||| |||||||||| |
|
|
| T |
5285424 |
caccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgatgtatt |
5285364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 5691634 - 5691390
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||| |||||||||||||||||||| |||| |||| |||||| ||||||||||||| | |||||||||||||||||||||| |||||||||||| | | |
|
|
| T |
5691634 |
ttaagaataagctatgatggtttaagtgattatacggagaaagaaatattccttgacgtggcttgtttctttattgggatggttcgaaatgatgttgtac |
5691535 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
| |||||| |||| |||| |||| || | ||||||||||| ||||||||| |||||||||||||| || || |||| || ||||| |||| | ||||| |
|
|
| T |
5691534 |
atatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgca |
5691435 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatc |
245 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
5691434 |
tgatttgttgcgagatatgggaagagaaatcgttcgtgagaaatc |
5691390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 5431886 - 5432220
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||| | | ||||| |||||||||||||||||||||||||||||||||| | ||| |||||||||||||| | |
|
|
| T |
5431886 |
ttaaaaataagctatgatggtttagacgataaatcccagaaagcaatattccttgacatagcttgtttctttattggtaaggagcgaaatgatgttatac |
5431985 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
| ||| ||||||||||| || | || |||||| ||||||||| |||||||||||||| ||| | ||| | |||| | | ||||||||||| ||||| |
|
|
| T |
5431986 |
atatactaaatggctgtcgattgtttgctgaagatggaataagagtccttgttgagcgtagcttagtatatattgatgatgataacaagcttggaatgca |
5432085 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||| || | || |||||| ||| |||||||| | ||| ||||||||| ||| ||||||||| || | |
|
|
| T |
5432086 |
tgatttgttgcgggatatgggaagagaaatcatttgtaataatccaccaaaggatcctgaggagcatagcaggttgtggcttcctgaggatgttgatggt |
5432185 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaacttcttatac |
335 |
Q |
| |
|
||||| || ||| |||||||||||||| ||||| |
|
|
| T |
5432186 |
gtattagcaagacaaactgtaagaacttcatatac |
5432220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 177; Significance: 3e-95; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 36215415 - 36215091
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||||||| |||||||| ||| |||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
36215415 |
ttaaaaatgagctatgaaggtctaaatgatgacacggagaaagaaatattccttgacatagcttgtttctttattgggatggacagaaatgatgttatac |
36215316 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
| ||||||||||| ||| |||||| || ||||||||| ||||||| ||||| ||||||||||||||||| || |||| || ||||| |||||| ||||| |
|
|
| T |
36215315 |
atatattaaatggaagtgaactttttgcagaaattggagtaagtgttcttgtagagcgaagccttgtaactgttgatgataggaacaggcttggaatgca |
36215216 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||| ||||| |||||||||||| | |||| ||| |||| |
|
|
| T |
36215215 |
tgatttgctgcgagatatgggaagagagatcattcgtgagaaatcaccaaaggagcttgaggagcgtagcaggttgtggtttaataaggacgtggctgat |
36215116 |
T |
|
| Q |
301 |
gtattgtcagaacatactgtaagaa |
325 |
Q |
| |
|
||||| |||||||| |||||||||| |
|
|
| T |
36215115 |
gtattatcagaacaaactgtaagaa |
36215091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 34727254 - 34727031
Alignment:
| Q |
4 |
aaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaa |
103 |
Q |
| |
|
|||||||||| ||||||||||| ||||||| || |||| |||||||||||| || |||| |||||||||||||||||||| | || || | | || |
|
|
| T |
34727254 |
aaaataagctttgatggtttaagtgatgatgatgtgaaagaaatattccttgatattgcttttttctttattgggatggaccaggaagaggtaactacaa |
34727155 |
T |
|
| Q |
104 |
tattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatga |
203 |
Q |
| |
|
|||| | |||||||| | ||| || || |||||||||||| |||| || | ||||| ||||| || ||| | ||||||||| |||| |||||||| |
|
|
| T |
34727154 |
tattggaaggctgtgggcattttgcagatattggaataagtctcctagtacaaaagagcctcgtaactgttgataggaagaacaagattgggatgcatga |
34727055 |
T |
|
| Q |
204 |
tttgctgcgagatatgggaagaga |
227 |
Q |
| |
|
|||||| ||||| |||||| |||| |
|
|
| T |
34727054 |
tttgctacgagacatgggacgaga |
34727031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 170; Significance: 5e-91; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 10191 - 9890
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
10191 |
ttaaaagtaagctatgatggtttaaatgatgatacagaaaaagatatattccttgacatagcttgtttctttattgggatggaccgaaacgatgttacac |
10092 |
T |
|
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
||||||||||||| ||||||||||| ||| | || |||||||||||||||||||||||||||||| |||| ||||||| |||||| | ||||| ||||| |
|
|
| T |
10091 |
aaatattaaatggatgtggactttttgctaatatcggaataagtgtccttgttgagcgaagccttctaactgtcgatgataagaatacacttggaatgca |
9992 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
|||||| | |||||||||||||| |||||||||||||| |||||||||| ||| |||||||| ||||||||||| ||||||| |||||||||||| || |
|
|
| T |
9991 |
tgatttattacgagatatgggaagggaaatcattcgtgaaaaatcaccaagggatcctgaggaccgtagtaggttatggtttcaagaggatgtgcttaat |
9892 |
T |
|
| Q |
301 |
gt |
302 |
Q |
| |
|
|| |
|
|
| T |
9891 |
gt |
9890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 151; Significance: 1e-79; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 8876280 - 8876561
Alignment:
| Q |
1 |
ttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattc |
100 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
8876280 |
ttaaaaataagctatgatggtctaaatgatgatattgcgaaagaaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttatac |
8876379 |
T |
|
| Q |
101 |
aaata--ttaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatg |
198 |
Q |
| |
|
| ||| |||||||| |||| ||||| ||||||||||||||||||| |||||||| |||||||||||||| | |||| | ||| | |||||| ||| |
|
|
| T |
8876380 |
atatattttaaatgggtgtgaactttatcctgaaattggaataagtgttcttgttgaacgaagccttgtaaccatggatgaaaggaatatgcttggaatg |
8876479 |
T |
|
| Q |
199 |
catgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggt |
280 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||| |
|
|
| T |
8876480 |
catgatttgttgacagatatgggaagagaaatcattcgtgagaaatcaccaaaggatcctgaggagcgtagcaggttgtggt |
8876561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 15801829 - 15801970
Alignment:
| Q |
184 |
aacaagcttggcatgcatgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttc |
283 |
Q |
| |
|
||||||||||| ||||||| | |||| ||||| |||||||||||||| ||||||| | ||||| |||||||||| |||||| | | ||||||| | |
|
|
| T |
15801829 |
aacaagcttggaatgcatgctctgctacgagacatgggaagagaaattgttcgtgaaagttcacctgaggagcctgagaaacgtactcgattgtggtgtt |
15801928 |
T |
|
| Q |
284 |
gtgaggatgtgcttgatgtattgtcagaacatactgtaagaa |
325 |
Q |
| |
|
||| ||||| |||||||| || | ||||| || ||||||| |
|
|
| T |
15801929 |
ttgaagatgtagttgatgtactggccgaacaaaccgtaagaa |
15801970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 116; Significance: 8e-59; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 45 - 324
Target Start/End: Complemental strand, 22585800 - 22585521
Alignment:
| Q |
45 |
aatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaataagt |
144 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||| |||||||||||||||||||| | |||||||||| |||||||||| || |||||||||||||| |
|
|
| T |
22585800 |
aatattccttgacatagcttttttcttaattggaatggaccgaaatgatgttatactcatattaaatgactgtggacttcatgcagaaattggaataagc |
22585701 |
T |
|
| Q |
145 |
gtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatttgctgcgagatatgggaagagaaatcattcgtgagaaat |
244 |
Q |
| |
|
|||||||||||| |||||||||| | || |||| |||||||| |||||| ||||||||||||||||||||||||||||||| ||| ||| |||| ||| |
|
|
| T |
22585700 |
gtccttgttgagagaagccttgtgagtgttgatgataagaacaggcttggaatgcatgatttgctgcgagatatgggaagaggaattgttcttgaggaat |
22585601 |
T |
|
| Q |
245 |
caccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgatgtattgtcagaacatactgtaaga |
324 |
Q |
| |
|
|||||| | |||||| | ||||| ||||||| || || ||||||||| |||| ||||| ||| |||| ||||||||| |
|
|
| T |
22585600 |
caccaaagagtcctgagaagcgtagcaggttgttgtatccggaggatgtgattgacgtattatcaaaacaaactgtaaga |
22585521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0373 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0373
Description:
Target: scaffold0373; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 230
Target Start/End: Complemental strand, 11385 - 11171
Alignment:
| Q |
16 |
gatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggct |
115 |
Q |
| |
|
||||| ||||| ||| |||||||||| |||||| ||||| |||||||| ||||||||||||||||| | |||||||| ||||||||||||||||| | |
|
|
| T |
11385 |
gatgggttaaaagattgtactgagaaacaaatatttcttgatatagcttgcttctttattgggatggatcaaaatgatgcaattcaaatattaaatgggt |
11286 |
T |
|
| Q |
116 |
gtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatttgctgcgaga |
215 |
Q |
| |
|
||||| |||| ||||| |||||||| | || |||||||| || ||||||||| || || ||| ||||||||| | |||||||||||| | |||| |
|
|
| T |
11285 |
gtggattttttgctgatattggaattaaagttcttgttgaaagagcccttgtaactgttgacaataataacaagcttagaatgcatgatttgttaagaga |
11186 |
T |
|
| Q |
216 |
tatgggaagagaaat |
230 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
11185 |
catgggaagacaaat |
11171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 328
Target Start/End: Complemental strand, 3326292 - 3326071
Alignment:
| Q |
107 |
taaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgattt |
206 |
Q |
| |
|
|||||||||||||||||| || | |||||||||||||| || | ||||| |||||||||| | || || ||||||||||| |||||| ||| |
|
|
| T |
3326292 |
taaatggctgtggactttatgcaaatattggaataagtgttctcatagagcggagccttgtaaaaattgaaaagaataacaagcttggaatgcattgttt |
3326193 |
T |
|
| Q |
207 |
gctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgatgtattg |
306 |
Q |
| |
|
| | |||| |||||||||||||| |||||||| | || ||| ||||||| | | |||||||| |||||||||| ||||||||||| ||| | ||| |
|
|
| T |
3326192 |
gataagagacatgggaagagaaattattcgtgaaagttctgcaaaagagcctgggaagcgtagtagattgtggtttcatgaggatgtgcatgacattttg |
3326093 |
T |
|
| Q |
307 |
tcagaacatactgtaagaactt |
328 |
Q |
| |
|
|| |||||||||||||||||| |
|
|
| T |
3326092 |
acaaaacatactgtaagaactt |
3326071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 3313695 - 3313836
Alignment:
| Q |
184 |
aacaagcttggcatgcatgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttc |
283 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| |||||| ||||||| | ||||| | ||||| ||||||||| | |||||| | ||||||| || |
|
|
| T |
3313695 |
aacaagcttggaatgcatgatttactgcgagacatgggacgagaaattgtccgtgaaagttcacctgaggagcctgaaaagcgtagtcgattgtggtatc |
3313794 |
T |
|
| Q |
284 |
gtgaggatgtgcttgatgtattgtcagaacatactgtaagaa |
325 |
Q |
| |
|
||||||||| |||||||| || | || ||||||||||||| |
|
|
| T |
3313795 |
atgaggatgtagttgatgtactgaccgaccatactgtaagaa |
3313836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 7165976 - 7165853
Alignment:
| Q |
107 |
taaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgattt |
206 |
Q |
| |
|
||||||| |||||||||| ||||| |||||||||| ||||| || ||||| |||||||| | | || || ||||||||||| ||||||||||| |
|
|
| T |
7165976 |
taaatggttgtggactttatgctgacattggaataacggtcctcgtagagcggagccttgtgaaaattgaaaagaataacaagcttggaatgcatgattt |
7165877 |
T |
|
| Q |
207 |
gctgcgagatatgggaagagaaat |
230 |
Q |
| |
|
||| |||| |||||||||||||| |
|
|
| T |
7165876 |
gcttagagacatgggaagagaaat |
7165853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 3392815 - 3392763
Alignment:
| Q |
187 |
aagcttggcatgcatgatttgctgcgagatatgggaagagaaatcattcgtga |
239 |
Q |
| |
|
|||||||| |||||||||||||| ||||| |||||||| ||||| ||||||| |
|
|
| T |
3392815 |
aagcttggaatgcatgatttgctacgagacatgggaagggaaattgttcgtga |
3392763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 305
Target Start/End: Original strand, 5263 - 5467
Alignment:
| Q |
101 |
aaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgca |
200 |
Q |
| |
|
||||||||||||| ||||| |||| || || |||||||| | |||||||| ||||||||||||||||| || || || |||||||||| | ||||| |
|
|
| T |
5263 |
aaatattaaatgggtgtgggttttttgcggatattggaattaaagtccttgtagagcgaagccttgtaactgttgacaataggaacaagcttagaatgca |
5362 |
T |
|
| Q |
201 |
tgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcgtgaggatgtgcttgat |
300 |
Q |
| |
|
||| ||| || ||||||||||||| |||| || ||| |||||||| | || |||||| | || |||||||||||| |||||||| ||| |||| |
|
|
| T |
5363 |
tgacttgttgagagatatgggaaggcaaataatctatgaagaatcaccatttgatcctgagaaccgcagtaggttgtggcgccgtgaggaagtgtatgat |
5462 |
T |
|
| Q |
301 |
gtatt |
305 |
Q |
| |
|
||||| |
|
|
| T |
5463 |
gtatt |
5467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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