View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11292_high_12 (Length: 210)
Name: NF11292_high_12
Description: NF11292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11292_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 249989 - 249806
Alignment:
| Q |
14 |
atgaaattgaaaacgcactaaaatatgtgctgtaagtgtaatgtatatttgtggatacaca----atcacctctatccttctttgccaccgatattatgc |
109 |
Q |
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| T |
249989 |
atgaaattgaaaacgcactaaaatatgtgctgtaagtgtaatgtatatttgtggatacacatgtaatcacctctatccttctttgccaccgatattatgc |
249890 |
T |
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| Q |
110 |
caaagccaaaaatactttctcttcacatgtctttgtttgtagtgaatatattatatattgacaaattttgggtcaccaattgtg |
193 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
249889 |
caaagccaaaaatactttctcttcacatgtctttgtttgtagtgaatatattatatattgacaaattttgggtcaccaattgtg |
249806 |
T |
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