View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11292_high_3 (Length: 611)

Name: NF11292_high_3
Description: NF11292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11292_high_3
NF11292_high_3
[»] chr4 (9 HSPs)
chr4 (10-594)||(2900645-2901230)
chr4 (17-265)||(2884064-2884312)
chr4 (18-241)||(2874094-2874317)
chr4 (402-450)||(23819119-23819167)
chr4 (411-449)||(43932474-43932512)
chr4 (72-118)||(51046642-51046688)
chr4 (402-446)||(6987737-6987781)
chr4 (402-446)||(28615553-28615597)
chr4 (402-438)||(53673662-53673698)
[»] chr2 (11 HSPs)
chr2 (12-243)||(44213344-44213575)
chr2 (12-243)||(44225505-44225736)
chr2 (12-243)||(44236319-44236549)
chr2 (404-450)||(29316767-29316813)
chr2 (402-455)||(1939319-1939372)
chr2 (386-443)||(9556253-9556310)
chr2 (402-446)||(7283026-7283070)
chr2 (402-450)||(10563550-10563598)
chr2 (402-446)||(34652032-34652076)
chr2 (402-450)||(35378524-35378572)
chr2 (402-450)||(40158748-40158796)
[»] chr7 (17 HSPs)
chr7 (30-155)||(39360711-39360836)
chr7 (66-148)||(39334909-39334991)
chr7 (66-148)||(39346167-39346249)
chr7 (30-155)||(39567579-39567704)
chr7 (66-148)||(39550822-39550904)
chr7 (66-148)||(39541564-39541646)
chr7 (18-157)||(39591851-39591990)
chr7 (63-121)||(39577419-39577477)
chr7 (168-228)||(39592093-39592153)
chr7 (411-448)||(18516057-18516094)
chr7 (153-226)||(39577601-39577674)
chr7 (401-446)||(47134753-47134798)
chr7 (402-450)||(22551397-22551445)
chr7 (401-445)||(29286820-29286864)
chr7 (172-228)||(39567804-39567860)
chr7 (401-445)||(44151477-44151521)
chr7 (402-446)||(46082066-46082110)
[»] chr5 (9 HSPs)
chr5 (404-450)||(41957443-41957489)
chr5 (402-450)||(13604841-13604889)
chr5 (401-444)||(35963270-35963313)
chr5 (405-450)||(1899187-1899232)
chr5 (402-447)||(36639552-36639597)
chr5 (402-450)||(8177524-8177572)
chr5 (402-450)||(14331397-14331445)
chr5 (402-450)||(31688069-31688117)
chr5 (402-450)||(31694548-31694596)
[»] chr1 (17 HSPs)
chr1 (401-450)||(28689444-28689493)
chr1 (402-450)||(27140508-27140556)
chr1 (402-445)||(35017606-35017649)
chr1 (401-446)||(4868429-4868474)
chr1 (402-450)||(4202143-4202191)
chr1 (402-450)||(27963362-27963410)
chr1 (406-449)||(12477280-12477323)
chr1 (419-450)||(27145968-27145999)
chr1 (402-448)||(10199402-10199448)
chr1 (72-121)||(2163906-2163955)
chr1 (401-450)||(11695890-11695939)
chr1 (419-448)||(27145589-27145618)
chr1 (405-450)||(29723522-29723567)
chr1 (402-439)||(43333711-43333748)
chr1 (402-450)||(6292523-6292571)
chr1 (402-450)||(11639408-11639456)
chr1 (402-450)||(26184778-26184826)
[»] chr6 (17 HSPs)
chr6 (402-445)||(29296292-29296335)
chr6 (385-446)||(7148679-7148740)
chr6 (402-446)||(3528833-3528877)
chr6 (402-450)||(7785736-7785784)
chr6 (402-446)||(9027608-9027652)
chr6 (399-450)||(283122-283173)
chr6 (402-448)||(8420191-8420237)
chr6 (402-444)||(27909636-27909678)
chr6 (401-443)||(31583708-31583750)
chr6 (72-121)||(3828397-3828446)
chr6 (405-450)||(31624291-31624336)
chr6 (405-450)||(34939777-34939822)
chr6 (386-446)||(281844-281904)
chr6 (406-450)||(5566169-5566213)
chr6 (402-446)||(6536977-6537021)
chr6 (402-446)||(9667981-9668025)
chr6 (402-450)||(32171375-32171423)
[»] chr3 (17 HSPs)
chr3 (404-450)||(1217792-1217838)
chr3 (401-446)||(42745067-42745112)
chr3 (402-450)||(54180772-54180820)
chr3 (410-448)||(12923319-12923357)
chr3 (402-448)||(24785235-24785281)
chr3 (400-446)||(29771866-29771912)
chr3 (404-446)||(37273166-37273208)
chr3 (402-448)||(37825152-37825198)
chr3 (405-450)||(3467380-3467425)
chr3 (88-121)||(8537388-8537421)
chr3 (99-156)||(25525628-25525685)
chr3 (402-446)||(3015839-3015883)
chr3 (402-450)||(20192598-20192646)
chr3 (390-450)||(24624228-24624288)
chr3 (402-446)||(36200126-36200170)
chr3 (403-447)||(36445856-36445900)
chr3 (402-446)||(43115086-43115130)
[»] scaffold0003 (1 HSPs)
scaffold0003 (386-450)||(306340-306404)
[»] chr8 (9 HSPs)
chr8 (403-445)||(3600735-3600777)
chr8 (404-450)||(9835892-9835938)
chr8 (403-445)||(14339602-14339644)
chr8 (401-446)||(13000420-13000465)
chr8 (405-446)||(25869262-25869303)
chr8 (386-450)||(26473744-26473808)
chr8 (402-446)||(31875591-31875635)
chr8 (402-450)||(41606895-41606943)
chr8 (402-450)||(42215298-42215346)


Alignment Details
Target: chr4 (Bit Score: 534; Significance: 0; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 534; E-Value: 0
Query Start/End: Original strand, 10 - 594
Target Start/End: Original strand, 2900645 - 2901230
Alignment:
Q  10 gaagcagagagataactgcagttccattaagaatatgaacatattgcctaagagatttcacaatttggaaagttgtggaactgtccaagccagtagatat 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2900645 gaagcaaagagataactgcagttccattaagaatatgaacatattgcctaagagatttcacaatttggaaagttgtggaactgtccaagccagtagatat 2900744  T
Q  110 ttcatccatgaataaagcatttgctggtccaaccaacatttctcctgtggtaactcgctttctttgtcctccggagataccacgtaacatttcattcccc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2900745 ttcatccatgaataaagcatttgctggtccaaccaacatttctcctgtggtaactcgctttctttgtcctccggagataccacgtaacatttcattcccc 2900844  T
Q  210 accatagtatcagcacatacatccaaccccaaaagctgtatgattttcaattaaataaggtcannnnnnnn-ataaacagtctatttaagtgcttacagc 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||    
T  2900845 accatagtatcagcacatacatccaaccccaaaagctgtatgattttcaattaaataaggtcatttttttttataaacagtctatttaagtgcttacagc 2900944  T
Q  309 atataagtatttatgtattaactattatttctagaacaaaagatgaaataaaggtaaactattattttgcttttccaataagctaccctaggaagcttat 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2900945 atataagtatttatgtattaactattatttctagaacaaaagatgaaataaaggtaaactattattttgcttttccaataagctaccataggaagcttat 2901044  T
Q  409 gtaaataagatgaaaataacttatggacatgtcataagctgtcattaaatacttatttcagtaactaaattaaaataattcaatacaaacatactctaaa 508  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2901045 gtaaataagataaaaataacttatggacatgtcataagctgtcattaaatacttatgtcagtaactaaattaaaataattcaatacaaacatactctaaa 2901144  T
Q  509 taccttgtgactttacttcatagacaatcttaaagaacttgtaaagaataagagagtctcattttggctgtgctaatacctttagt 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2901145 taccttgtgactttacttcatagacaatcttaaagaacttgtaaagaataagagagtctcgttttggctgtgctaatacctttagt 2901230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 17 - 265
Target Start/End: Complemental strand, 2884312 - 2884064
Alignment:
Q  17 agagataactgcagttccattaagaatatgaacatattgcctaagagatttcacaatttggaaagttgtggaactgtccaagccagtagatatttcatcc 116  Q
    |||||||||||  |||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2884312 agagataactgtggttccattaagaatgtgaacatattgctgaagagatctcacaatttggaaagttgtggaactgtccaaaccagtagatatttcatcc 2884213  T
Q  117 atgaataaagcatttgctggtccaaccaacatttctcctgtggtaactcgctttctttgtcctccggagataccacgtaacatttcattccccaccatag 216  Q
    |||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  2884212 atgaataatgcatttgctggcccgaccaacatctctcctgtggtaactcgctttctttgacctccggaaataccacgcaacatttcattccccaccatag 2884113  T
Q  217 tatcagcacatacatccaaccccaaaagctgtatgattttcaattaaat 265  Q
    | ||||||||||||||||| ||||||||||  || |||||||| |||||    
T  2884112 tgtcagcacatacatccaatcccaaaagctacataattttcaagtaaat 2884064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 2874317 - 2874094
Alignment:
Q  18 gagataactgcagttccattaagaatatgaacatattgcctaagagatttcacaatttggaaagttgtggaactgtccaagccagtagatatttcatcca 117  Q
    ||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| |||| ||||||||| || |||||||| |||||||||||||    
T  2874317 gagataagtgcagttccatgaagaatataaacatattgcctaagagatttcacaatttgaaaagctgtggaactatctaagccagttgatatttcatcca 2874218  T
Q  118 tgaataaagcatttgctggtccaaccaacatttctcctgtggtaactcgctttctttgtcctccggagataccacgtaacatttcattccccaccatagt 217  Q
    |||||| | | || | ||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||   ||||||||  || ||||| ||    
T  2874217 tgaatagaactttcgatggtccaaccaacatttctcctgtggtaagtctctttctttgtccaccggagataccacggtgcatttcatctcctaccatggt 2874118  T
Q  218 atcagcacatacatccaaccccaa 241  Q
    ||||||||||| ||||||||||||    
T  2874117 atcagcacatatatccaaccccaa 2874094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 23819119 - 23819167
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||  |||||||||||||| |||||||||||||||||||||||||    
T  23819119 agcttatagaaataagatgaaaacaacttatggacatgtcataagctgt 23819167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 43932474 - 43932512
Alignment:
Q  411 aaataagatgaaaataacttatggacatgtcataagctg 449  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  43932474 aaataagatgaaaacaacttatggacatgtcatgagctg 43932512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 51046688 - 51046642
Alignment:
Q  72 atttggaaagttgtggaactgtccaagccagtagatatttcatccat 118  Q
    ||||| ||||| ||||||||||| |||||||| ||||||||||||||    
T  51046688 atttgaaaagtagtggaactgtctaagccagttgatatttcatccat 51046642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 6987781 - 6987737
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||||||| ||||||| ||||||||  ||||||||||||||||||    
T  6987781 agcttatggaaataagttgaaaatagtttatggacatgtcataag 6987737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 28615553 - 28615597
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||||||| ||||||| |||||||| || ||||||||||||||||    
T  28615553 agcttatggaaataaggtgaaaatatctaatggacatgtcataag 28615597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 438
Target Start/End: Complemental strand, 53673698 - 53673662
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacat 438  Q
    |||||||||||||||| |||||| |||||||||||||    
T  53673698 agcttatgtaaataagctgaaaacaacttatggacat 53673662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 3e-68; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 12 - 243
Target Start/End: Original strand, 44213344 - 44213575
Alignment:
Q  12 agcagagagataactgcagttccattaagaatatgaacatattgcctaagagatttcacaatttggaaagttgtggaactgtccaagccagtagatattt 111  Q
    ||||| || ||||||||||| ||||| | ||| |||||||||||||| |||||  |||||||||| |||||||||||||||||||  |||||||| ||||    
T  44213344 agcagtgatataactgcagtgccattcataatgtgaacatattgcctcagagagctcacaatttgaaaagttgtggaactgtccagtccagtagaaattt 44213443  T
Q  112 catccatgaataaagcatttgctggtccaaccaacatttctcctgtggtaactcgctttctttgtcctccggagataccacgtaacatttcattccccac 211  Q
    |||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||| ||    
T  44213444 catccatgaacaatgcattggctggtccaaccaacatctctcctgtggtaacacgcttcctttgtcctccggagataccacgcaacatttcatcccctac 44213543  T
Q  212 catagtatcagcacatacatccaaccccaaaa 243  Q
    ||| ||||| ||||||| ||||||||||||||    
T  44213544 catggtatccgcacatatatccaaccccaaaa 44213575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 12 - 243
Target Start/End: Original strand, 44225505 - 44225736
Alignment:
Q  12 agcagagagataactgcagttccattaagaatatgaacatattgcctaagagatttcacaatttggaaagttgtggaactgtccaagccagtagatattt 111  Q
    ||||| || ||||||||||| ||||| | ||| ||||||||||| || |||||  ||||||| || ||||| |||||||||||||  |||||||| ||||    
T  44225505 agcagtgatataactgcagtgccattcataatgtgaacatattgtctcagagagctcacaatctgaaaagtagtggaactgtccagcccagtagaaattt 44225604  T
Q  112 catccatgaataaagcatttgctggtccaaccaacatttctcctgtggtaactcgctttctttgtcctccggagataccacgtaacatttcattccccac 211  Q
    |||||||||| || ||||| ||||||||||||||||| |||||||| || || ||||| || |||||||| ||||||||||||||||||||||  |||||    
T  44225605 catccatgaacaatgcattggctggtccaaccaacatctctcctgtagttacacgcttcctctgtcctccagagataccacgtaacatttcatctcccac 44225704  T
Q  212 catagtatcagcacatacatccaaccccaaaa 243  Q
    ||| ||||| || |||| ||||||||||||||    
T  44225705 catggtatccgcgcatatatccaaccccaaaa 44225736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 12 - 243
Target Start/End: Original strand, 44236319 - 44236549
Alignment:
Q  12 agcagagagataactgcagttccattaagaatatgaacatattgcctaagagatttcacaatttggaaagttgtggaactgtccaagccagtagatattt 111  Q
    ||||| || ||||||||||| ||||| | ||| ||||||||||| || |||||  ||||||| || |||||||||||||||||||  |||||||| |||     
T  44236319 agcagtgatataactgcagtgccattcataatgtgaacatattgtctcagagagctcacaatctgaaaagttgtggaactgtccagcccagtagaaatt- 44236417  T
Q  112 catccatgaataaagcatttgctggtccaaccaacatttctcctgtggtaactcgctttctttgtcctccggagataccacgtaacatttcattccccac 211  Q
    |||||||||| || ||||| ||||||||||||||||| |||||||| || || ||||| || |||||||| ||||||||||||||||||||||  |||||    
T  44236418 catccatgaacaatgcattggctggtccaaccaacatctctcctgtagttacacgcttcctctgtcctccagagataccacgtaacatttcatctcccac 44236517  T
Q  212 catagtatcagcacatacatccaaccccaaaa 243  Q
    ||| ||||| || |||| ||||||||||||||    
T  44236518 catggtatccgcgcatatatccaaccccaaaa 44236549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 29316813 - 29316767
Alignment:
Q  404 cttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||| ||||||| |||||| |||||||| ||||||||||||||||    
T  29316813 cttatggaaataagctgaaaagaacttatgaacatgtcataagctgt 29316767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 1939372 - 1939319
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgtcatta 455  Q
    |||||||| ||||||| |||||| | ||||||||||||||||||| ||| ||||    
T  1939372 agcttatggaaataagttgaaaacagcttatggacatgtcataagttgttatta 1939319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 9556253 - 9556310
Alignment:
Q  386 ataagctaccctaggaagcttatgtaaataagatgaaaataacttatggacatgtcat 443  Q
    |||||||| ||||| ||||||||| ||||||| |||||   |||||||||||||||||    
T  9556253 ataagctatcctagaaagcttatgaaaataagttgaaatctacttatggacatgtcat 9556310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 7283026 - 7283070
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||||||| | |||||||||||| ||||||||||||| |||||||    
T  7283026 agcttatggatataagatgaaaacaacttatggacatatcataag 7283070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 10563598 - 10563550
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||| | ||||||| |||||||| ||||||||||||||||| |||||    
T  10563598 agcttaagaaaataagctgaaaatagcttatggacatgtcataggctgt 10563550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 34652076 - 34652032
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||||||| ||||||| |||||| | |||||||||||||||||||    
T  34652076 agcttatggaaataagttgaaaacagcttatggacatgtcataag 34652032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 35378572 - 35378524
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| ||||||| ||||||||||||||| ||| ||||| ||||||    
T  35378572 agcttatgaaaataagctgaaaataacttatgaacaagtcatcagctgt 35378524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 40158748 - 40158796
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    ||||||||||| |||| |||||| |||||||  ||||||||||||||||    
T  40158748 agcttatgtaattaagctgaaaacaacttataaacatgtcataagctgt 40158796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 4e-24; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 39360836 - 39360711
Alignment:
Q  30 gttccattaagaatatgaacatattgcctaagagatttcacaatttggaaagttgtggaactgtccaagccagtagatatttcatccatgaataaagcat 129  Q
    ||||| || ||||| |||||||||||||| |  || ||||||||||| |||||||| || || ||||| ||||||||||||||||||||||||||||| |    
T  39360836 gttcctttgagaatgtgaacatattgcctcattgaattcacaatttgaaaagttgttgagctatccaaaccagtagatatttcatccatgaataaagctt 39360737  T
Q  130 ttgctggtccaaccaacatttctcct 155  Q
    | |  |||||||||||||| ||||||    
T  39360736 tagtcggtccaaccaacatctctcct 39360711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 39334991 - 39334909
Alignment:
Q  66 ttcacaatttggaaagttgtggaactgtccaagccagtagatatttcatccatgaataaagcatttgctggtccaaccaacat 148  Q
    ||||||||||| |||||||| || || ||||| ||||||||||||||||||||||||||||| || | |||||||||||||||    
T  39334991 ttcacaatttgaaaagttgttgagctatccaaaccagtagatatttcatccatgaataaagctttagttggtccaaccaacat 39334909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 39346249 - 39346167
Alignment:
Q  66 ttcacaatttggaaagttgtggaactgtccaagccagtagatatttcatccatgaataaagcatttgctggtccaaccaacat 148  Q
    ||||||||||| |||||||| || || ||||| ||||||||||||||||||||||||||||| || | |||||||||||||||    
T  39346249 ttcacaatttgaaaagttgttgagctatccaaaccagtagatatttcatccatgaataaagctttagttggtccaaccaacat 39346167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 30 - 155
Target Start/End: Original strand, 39567579 - 39567704
Alignment:
Q  30 gttccattaagaatatgaacatattgcctaagagatttcacaatttggaaagttgtggaactgtccaagccagtagatatttcatccatgaataaagcat 129  Q
    |||||||| ||||| || |||| |||||| |  || ||||||||||| |||||||| || || ||||| |||||||||||||| |||||||||| ||| |    
T  39567579 gttccattgagaatgtggacatcttgcctcattgaattcacaatttgaaaagttgttgagctatccaaaccagtagatatttcgtccatgaatagagctt 39567678  T
Q  130 ttgctggtccaaccaacatttctcct 155  Q
    | |  |||||||||||||||||||||    
T  39567679 tagtgggtccaaccaacatttctcct 39567704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 39550822 - 39550904
Alignment:
Q  66 ttcacaatttggaaagttgtggaactgtccaagccagtagatatttcatccatgaataaagcatttgctggtccaaccaacat 148  Q
    |||||||| || |||||||| || || ||||| ||||||||||||||||||||||||| ||| || || ||||||||||||||    
T  39550822 ttcacaatctgaaaagttgtcgagctatccaaaccagtagatatttcatccatgaatagagctttcgccggtccaaccaacat 39550904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 39541564 - 39541646
Alignment:
Q  66 ttcacaatttggaaagttgtggaactgtccaagccagtagatatttcatccatgaataaagcatttgctggtccaaccaacat 148  Q
    ||||||||||| |||||||| || || ||||| ||||||||||||||||||||||||| ||| || |  |||||||| |||||    
T  39541564 ttcacaatttgaaaagttgttgagctatccaaaccagtagatatttcatccatgaatagagctttagtcggtccaactaacat 39541646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 39591851 - 39591990
Alignment:
Q  18 gagataactgcagttccattaagaatatgaacatattgcctaagagatttcacaatttggaaagttgtggaactgtccaagccagtagatatttcatcca 117  Q
    ||||| || |||||||| || |||| ||| ||||| ||| | |  ||| |||||| ||| |||||||| || || ||||| |||||||||||||||||||    
T  39591851 gagattacagcagttcctttgagaagatggacataatgcatcactgatctcacaacttgaaaagttgtcgagctatccaaaccagtagatatttcatcca 39591950  T
Q  118 tgaataaagcatttgctggtccaaccaacatttctcctgt 157  Q
    |||| | ||| || |||||||| |||| ||| || |||||    
T  39591951 tgaaaagagccttagctggtcctaccagcatctcccctgt 39591990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 39577419 - 39577477
Alignment:
Q  63 gatttcacaatttggaaagttgtggaactgtccaagccagtagatatttcatccatgaa 121  Q
    |||||||||| ||| |||||||| || || ||||| |||||||||||||||||||||||    
T  39577419 gatttcacaacttgaaaagttgttgagctatccaaaccagtagatatttcatccatgaa 39577477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 39592093 - 39592153
Alignment:
Q  168 tttctttgtcctccggagataccacgtaacatttcattccccaccatagtatcagcacata 228  Q
    |||||||||||||| || ||||| | |||||||||||| ||||||| |||||| |||||||    
T  39592093 tttctttgtcctccagaaatacctcttaacatttcatttcccaccacagtatctgcacata 39592153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 448
Target Start/End: Complemental strand, 18516094 - 18516057
Alignment:
Q  411 aaataagatgaaaataacttatggacatgtcataagct 448  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  18516094 aaataagatgaaaataacttatgggcatatcataagct 18516057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 39577601 - 39577674
Alignment:
Q  153 cctgtggtaactcgctttctttgtcctccggagataccacgtaacatttcattccccaccatagtatcagcaca 226  Q
    ||||| ||||| || || ||||||||||| |||||||| | ||||||| |||| ||||||| |||||| |||||    
T  39577601 cctgtcgtaacccgtttcctttgtcctccagagatacctcttaacattgcatttcccaccacagtatctgcaca 39577674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 446
Target Start/End: Complemental strand, 47134798 - 47134753
Alignment:
Q  401 aagcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    ||||||||| ||||||| |||||| ||||||||||| |||||||||    
T  47134798 aagcttatgaaaataagctgaaaacaacttatggacgtgtcataag 47134753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 22551445 - 22551397
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||||||||||| |||||| ||| | || ||||||||||||||||    
T  22551445 agcttatgtaaataagctgaaaacaacatttgaacatgtcataagctgt 22551397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 445
Target Start/End: Original strand, 29286820 - 29286864
Alignment:
Q  401 aagcttatgtaaataagatgaaaataacttatggacatgtcataa 445  Q
    ||||||||||||||||| |||||| |||| ||| |||||||||||    
T  29286820 aagcttatgtaaataagctgaaaacaactgatgaacatgtcataa 29286864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 39567804 - 39567860
Alignment:
Q  172 tttgtcctccggagataccacgtaacatttcattccccaccatagtatcagcacata 228  Q
    ||||||| || |||||||| ||||||||| |||| || || ||||||||||||||||    
T  39567804 tttgtccaccagagatacctcgtaacattgcatttcctacaatagtatcagcacata 39567860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 445
Target Start/End: Complemental strand, 44151521 - 44151477
Alignment:
Q  401 aagcttatgtaaataagatgaaaataacttatggacatgtcataa 445  Q
    ||||||||| ||||||| |||||| | ||||||||||||||||||    
T  44151521 aagcttatggaaataagctgaaaacatcttatggacatgtcataa 44151477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 46082066 - 46082110
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||||||| ||||||| |||||| ||||||||| |||||||||||    
T  46082066 agcttatgaaaataagctgaaaacaacttatggtcatgtcataag 46082110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 41957489 - 41957443
Alignment:
Q  404 cttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||    
T  41957489 cttatgaaaataagatgaaaacaacttatggacatgtcataagctgt 41957443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 13604889 - 13604841
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| ||||||| |||||| ||| |||||||||||||||||||||    
T  13604889 agcttatgaaaataagttgaaaacaacgtatggacatgtcataagctgt 13604841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 444
Target Start/End: Original strand, 35963270 - 35963313
Alignment:
Q  401 aagcttatgtaaataagatgaaaataacttatggacatgtcata 444  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||    
T  35963270 aagcttatggaaataagctgaaaacaacttatggacatgtcata 35963313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 450
Target Start/End: Original strand, 1899187 - 1899232
Alignment:
Q  405 ttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    ||||| ||||||| |||||| |||||||| ||||||||||||||||    
T  1899187 ttatggaaataagctgaaaacaacttatgcacatgtcataagctgt 1899232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 447
Target Start/End: Original strand, 36639552 - 36639597
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagc 447  Q
    |||||||| |||||||| ||||| |||||||||||| |||||||||    
T  36639552 agcttatgaaaataagaggaaaacaacttatggacacgtcataagc 36639597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 8177572 - 8177524
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| ||||||  |||||| ||||||||||||| |||||||||||    
T  8177572 agcttatgaaaataacctgaaaacaacttatggacatatcataagctgt 8177524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 14331397 - 14331445
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| ||||||| |||||  | |||||||||||||||||||||||    
T  14331397 agcttatgaaaataagctgaaatcagcttatggacatgtcataagctgt 14331445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 31688069 - 31688117
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| ||||||| |||||||| ||||| |||| ||||||||||||    
T  31688069 agcttatgaaaataagttgaaaatagcttatagacaagtcataagctgt 31688117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 31694548 - 31694596
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| ||||||| |||||| |||||||||||| || |||||||||    
T  31694548 agcttatgaaaataagttgaaaacaacttatggacaagtgataagctgt 31694596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000004; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 28689493 - 28689444
Alignment:
Q  401 aagcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  28689493 aagcttatgaaaataagctgaaaacaacttatggacatgtcataagctgt 28689444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 27140508 - 27140556
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  27140508 agcttatgcaaataagctgaaaacaacttatggacatgtcataagctgt 27140556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 445
Target Start/End: Original strand, 35017606 - 35017649
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataa 445  Q
    |||||||| ||||||| |||||||||||||||||||||||||||    
T  35017606 agcttatggaaataagttgaaaataacttatggacatgtcataa 35017649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 4868429 - 4868474
Alignment:
Q  401 aagcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||    
T  4868429 aagcttatgtaaataagttgaaaacaacttattgacatgtcataag 4868474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 4202191 - 4202143
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||| | ||||||| |||||||| |||||||||||||||||||||||    
T  4202191 agcttacgaaaataagctgaaaatagcttatggacatgtcataagctgt 4202143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 27963410 - 27963362
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    ||||||| |||||||| | |||| |||||||||||||||||||||||||    
T  27963410 agcttatataaataagctaaaaacaacttatggacatgtcataagctgt 27963362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 449
Target Start/End: Complemental strand, 12477323 - 12477280
Alignment:
Q  406 tatgtaaataagatgaaaataacttatggacatgtcataagctg 449  Q
    |||| ||||||| |||||| ||||||||||||||||||||||||    
T  12477323 tatggaaataagctgaaaacaacttatggacatgtcataagctg 12477280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 450
Target Start/End: Original strand, 27145968 - 27145999
Alignment:
Q  419 tgaaaataacttatggacatgtcataagctgt 450  Q
    ||||||||||||||||||||||||||||||||    
T  27145968 tgaaaataacttatggacatgtcataagctgt 27145999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 10199448 - 10199402
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagct 448  Q
    |||||||| ||||||| |||||| |||||||| ||||||||||||||    
T  10199448 agcttatgaaaataagctgaaaacaacttatgaacatgtcataagct 10199402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 2163906 - 2163955
Alignment:
Q  72 atttggaaagttgtggaactgtccaagccagtagatatttcatccatgaa 121  Q
    ||||| |||||||| ||||||||||| ||||| |||||||| ||||||||    
T  2163906 atttgaaaagttgttgaactgtccaaaccagttgatatttcgtccatgaa 2163955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Original strand, 11695890 - 11695939
Alignment:
Q  401 aagcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    ||||||||| ||||||| |||||| | |||||||||||||||||| ||||    
T  11695890 aagcttatgaaaataagttgaaaacagcttatggacatgtcataaactgt 11695939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 448
Target Start/End: Original strand, 27145589 - 27145618
Alignment:
Q  419 tgaaaataacttatggacatgtcataagct 448  Q
    ||||||||||||||||||||||||||||||    
T  27145589 tgaaaataacttatggacatgtcataagct 27145618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 450
Target Start/End: Original strand, 29723522 - 29723567
Alignment:
Q  405 ttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    ||||||||||||| |||||| |  ||||||||||||||||||||||    
T  29723522 ttatgtaaataagttgaaaacagtttatggacatgtcataagctgt 29723567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 439
Target Start/End: Original strand, 43333711 - 43333748
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatg 439  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  43333711 agcttatggaaataagatgaaaataatttatggacatg 43333748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 6292523 - 6292571
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| ||||||| |||||| | |||||| ||||||||||||||||    
T  6292523 agcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgt 6292571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 11639456 - 11639408
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| ||||||| | |||| | |||||||||||||||||||||||    
T  11639456 agcttatgaaaataagctaaaaacagcttatggacatgtcataagctgt 11639408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 26184778 - 26184826
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| ||||||  |||||| | |||||||||||||||||||||||    
T  26184778 agcttatggaaataatctgaaaacagcttatggacatgtcataagctgt 26184826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000006; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 445
Target Start/End: Complemental strand, 29296335 - 29296292
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataa 445  Q
    |||||||| ||||||| |||||||||||||||||||||||||||    
T  29296335 agcttatgaaaataagctgaaaataacttatggacatgtcataa 29296292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 446
Target Start/End: Original strand, 7148679 - 7148740
Alignment:
Q  385 aataagctaccctaggaagcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    ||||||||||||| |  |||||||| ||||||| |||||||| |||||||||| ||||||||    
T  7148679 aataagctaccctggagagcttatgaaaataagttgaaaatagcttatggacaagtcataag 7148740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 3528833 - 3528877
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||||||| |||||||||||||| || ||||||||||||||||||    
T  3528833 agcttatgaaaataagatgaaaacaagttatggacatgtcataag 3528877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 7785784 - 7785736
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| ||||||| |||||| ||||||| |||||||||||||||||    
T  7785784 agcttatggaaataagctgaaaacaacttatagacatgtcataagctgt 7785736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 9027608 - 9027652
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||    
T  9027608 agcttatgaaaataagctgaaaacaacttatggacatgtcataag 9027652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 450
Target Start/End: Original strand, 283122 - 283173
Alignment:
Q  399 ggaagcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    ||||||||||  ||||||| ||||||||  ||||||||||||||||||||||    
T  283122 ggaagcttatagaaataagctgaaaatagtttatggacatgtcataagctgt 283173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 8420237 - 8420191
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagct 448  Q
    |||||||| ||||||| |||||||| ||| |||||||||||||||||    
T  8420237 agcttatggaaataagttgaaaatagcttgtggacatgtcataagct 8420191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 444
Target Start/End: Complemental strand, 27909678 - 27909636
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcata 444  Q
    |||||||| ||||||| |||||| |||||||||||||||||||    
T  27909678 agcttatggaaataagctgaaaacaacttatggacatgtcata 27909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 443
Target Start/End: Original strand, 31583708 - 31583750
Alignment:
Q  401 aagcttatgtaaataagatgaaaataacttatggacatgtcat 443  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||    
T  31583708 aagcttatggaaataagttgaaaacaacttatggacatgtcat 31583750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 3828397 - 3828446
Alignment:
Q  72 atttggaaagttgtggaactgtccaagccagtagatatttcatccatgaa 121  Q
    |||||||| || || ||||||||||| ||||| |||||||||||||||||    
T  3828397 atttggaatgtggttgaactgtccaaaccagtcgatatttcatccatgaa 3828446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 450
Target Start/End: Original strand, 31624291 - 31624336
Alignment:
Q  405 ttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    ||||| |||||| || ||||||||||||||||||||||| ||||||    
T  31624291 ttatgaaaataacattaaaataacttatggacatgtcatgagctgt 31624336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 450
Target Start/End: Original strand, 34939777 - 34939822
Alignment:
Q  405 ttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    ||||| ||||||| |||||| || ||||||||||||||||||||||    
T  34939777 ttatggaaataagctgaaaacaatttatggacatgtcataagctgt 34939822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 386 - 446
Target Start/End: Complemental strand, 281904 - 281844
Alignment:
Q  386 ataagctaccctaggaagcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||||||| |||||  |||| ||| ||||||| |||||| ||||||| |||||||||||||    
T  281904 ataagctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtcataag 281844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 406 - 450
Target Start/End: Complemental strand, 5566213 - 5566169
Alignment:
Q  406 tatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||| ||||||| |||||| ||||||||||||||| |||||||||    
T  5566213 tatggaaataagttgaaaacaacttatggacatgtaataagctgt 5566169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 6536977 - 6537021
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||||||| ||||||| |||||| |||||||| ||||||||||||    
T  6536977 agcttatggaaataagctgaaaacaacttatgaacatgtcataag 6537021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 9668025 - 9667981
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||||||| ||||||| |||||| | |||||||||||||||||||    
T  9668025 agcttatggaaataagttgaaaacagcttatggacatgtcataag 9667981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 32171423 - 32171375
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| ||||||| |||||||| ||| ||||| |||||||||||||    
T  32171423 agcttatggaaataagctgaaaatagcttctggacttgtcataagctgt 32171375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 1217838 - 1217792
Alignment:
Q  404 cttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||| || ||||||||||| |||||||||||||||||||||||||    
T  1217838 cttatgaaagtaagatgaaaacaacttatggacatgtcataagctgt 1217792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 42745067 - 42745112
Alignment:
Q  401 aagcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||||    
T  42745067 aagcttatggaaataagatgaaaacaacttatgaacatgtcataag 42745112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 54180820 - 54180772
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    ||||||| |||||||| | |||| |||||||||||||||||||||||||    
T  54180820 agcttatataaataagctaaaaacaacttatggacatgtcataagctgt 54180772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 410 - 448
Target Start/End: Complemental strand, 12923357 - 12923319
Alignment:
Q  410 taaataagatgaaaataacttatggacatgtcataagct 448  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  12923357 taaataagctgaaaacaacttatggacatgtcataagct 12923319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 24785235 - 24785281
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagct 448  Q
    |||||||||||||||| | |||| |||||||| ||||||||||||||    
T  24785235 agcttatgtaaataagctaaaaacaacttatgaacatgtcataagct 24785281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 446
Target Start/End: Original strand, 29771866 - 29771912
Alignment:
Q  400 gaagcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||||||||| ||||||| |||||| |||||||||||||||| ||||    
T  29771866 gaagcttatggaaataagttgaaaacaacttatggacatgtcctaag 29771912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 446
Target Start/End: Original strand, 37273166 - 37273208
Alignment:
Q  404 cttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||||| ||||||| |||||| |||||||||||||||||||||    
T  37273166 cttatggaaataagttgaaaacaacttatggacatgtcataag 37273208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 37825152 - 37825198
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagct 448  Q
    |||||||| ||||||  |||||| |||||||||||||||||||||||    
T  37825152 agcttatggaaataacctgaaaacaacttatggacatgtcataagct 37825198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 450
Target Start/End: Complemental strand, 3467425 - 3467380
Alignment:
Q  405 ttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    ||||| |||||||||| ||| ||||||||| |||||||||||||||    
T  3467425 ttatggaaataagatgcaaacaacttatggccatgtcataagctgt 3467380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 8537388 - 8537421
Alignment:
Q  88 aactgtccaagccagtagatatttcatccatgaa 121  Q
    |||||||||||||||| |||||||||||||||||    
T  8537388 aactgtccaagccagttgatatttcatccatgaa 8537421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 25525628 - 25525685
Alignment:
Q  99 ccagtagatatttcatccatgaataaagcatttgctggtccaaccaacatttctcctg 156  Q
    ||||| |||||||||||||| |||||||| |||  ||||||||| | |||||||||||    
T  25525628 ccagttgatatttcatccataaataaagcttttcttggtccaacaatcatttctcctg 25525685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 3015883 - 3015839
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||||||  |||||||||||||| | |||||||||||||||||||    
T  3015883 agcttattaaaataagatgaaaacatcttatggacatgtcataag 3015839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 20192646 - 20192598
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| |||| || |||||| | |||||||||||||||||||||||    
T  20192646 agcttatggaaatgagttgaaaacagcttatggacatgtcataagctgt 20192598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 390 - 450
Target Start/End: Original strand, 24624228 - 24624288
Alignment:
Q  390 gctaccctaggaagcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||| ||||| || ||||||| |||||| |||||| |  ||||||||||||||||||||||    
T  24624228 gctatcctagaaatcttatgttaataagctgaaaacagtttatggacatgtcataagctgt 24624288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 36200126 - 36200170
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||| ||| ||||||| |||||| |||||||||||||||||||||    
T  36200126 agctcatggaaataagctgaaaacaacttatggacatgtcataag 36200170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 403 - 447
Target Start/End: Original strand, 36445856 - 36445900
Alignment:
Q  403 gcttatgtaaataagatgaaaataacttatggacatgtcataagc 447  Q
    ||||||| |||||||||||||| |||| ||| |||||||||||||    
T  36445856 gcttatgaaaataagatgaaaacaactaatgaacatgtcataagc 36445900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 43115086 - 43115130
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||||||| ||||||| |||||| || ||||||||||||||||||    
T  43115086 agcttatggaaataagctgaaaacaagttatggacatgtcataag 43115130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 386 - 450
Target Start/End: Original strand, 306340 - 306404
Alignment:
Q  386 ataagctaccctaggaagcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| |||||  ||||||||||| |||| |||||| | ||||||| |||||||||||||||    
T  306340 ataagctatcctagagagcttatgtaagtaagctgaaaacagcttatgggcatgtcataagctgt 306404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000005; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 445
Target Start/End: Complemental strand, 3600777 - 3600735
Alignment:
Q  403 gcttatgtaaataagatgaaaataacttatggacatgtcataa 445  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||    
T  3600777 gcttatgaaaataagttgaaaacaacttatggacatgtcataa 3600735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 9835938 - 9835892
Alignment:
Q  404 cttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||| |||||||||||||| | |||||| ||||||||||||||||    
T  9835938 cttatggaaataagatgaaaacagcttatgaacatgtcataagctgt 9835892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 445
Target Start/End: Complemental strand, 14339644 - 14339602
Alignment:
Q  403 gcttatgtaaataagatgaaaataacttatggacatgtcataa 445  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||    
T  14339644 gcttatgaaaataagttgaaaacaacttatggacatgtcataa 14339602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 446
Target Start/End: Complemental strand, 13000465 - 13000420
Alignment:
Q  401 aagcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    ||||||||| ||||||| |||||| ||||| |||||||||||||||    
T  13000465 aagcttatggaaataagctgaaaacaacttgtggacatgtcataag 13000420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 446
Target Start/End: Complemental strand, 25869303 - 25869262
Alignment:
Q  405 ttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    ||||| ||||||| |||||| |||||||||||||||||||||    
T  25869303 ttatggaaataagctgaaaacaacttatggacatgtcataag 25869262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 386 - 450
Target Start/End: Complemental strand, 26473808 - 26473744
Alignment:
Q  386 ataagctaccctaggaagcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| |||||  |||||||| ||||||| | ||| || ||||| |||||||||||||||||    
T  26473808 ataagctatcctagagagcttatgaaaataagttaaaactagcttatagacatgtcataagctgt 26473744  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 31875635 - 31875591
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataag 446  Q
    |||||||| ||||||| |||||||  |||||||||||||||||||    
T  31875635 agcttatgaaaataagttgaaaatggcttatggacatgtcataag 31875591  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 41606943 - 41606895
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||| ||||||| |||||| ||||| || ||||||||||||||||    
T  41606943 agcttatggaaataagctgaaaacaacttttgaacatgtcataagctgt 41606895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 42215346 - 42215298
Alignment:
Q  402 agcttatgtaaataagatgaaaataacttatggacatgtcataagctgt 450  Q
    |||||||||||||||| |||||| | |||||| ||| ||||||||||||    
T  42215346 agcttatgtaaataagctgaaaacagcttatgaacaagtcataagctgt 42215298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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