View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11293A_low_116 (Length: 287)
Name: NF11293A_low_116
Description: NF11293A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11293A_low_116 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 5 - 261
Target Start/End: Complemental strand, 41923225 - 41922969
Alignment:
| Q |
5 |
caagaaccacctattttagagtttgatggacgtacgtttgtgatgatgattcaaaatttgtaaaatacccatctaacggacatcagcaaagactaatacg |
104 |
Q |
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| T |
41923225 |
caagaaccacctattttagagtttgatggacgtacgtttgtgatgatgattcaaaatttgtaaaatacccatctaacggacatcaacaaggactaatacg |
41923126 |
T |
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| Q |
105 |
aagttgacaataatatcaattttatttcataagtgagtagccgatgaatactttgcttcccgtgaatatccattgtaatctctactcttaatcctccccg |
204 |
Q |
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| T |
41923125 |
aagttgacaataatatcaattttatttcataagtgagtagccgatgaatactttgcttcccgtgaatatccattgtaatctctactcttaattctccccg |
41923026 |
T |
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| Q |
205 |
tctccaaccctgtcattcttcaacttgttctctctgaaatgagacatctctctctct |
261 |
Q |
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| T |
41923025 |
tctccatccctgtcatttttcaacttgttctctctgaaatgagacatctctctctct |
41922969 |
T |
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