View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11293A_low_187 (Length: 248)
Name: NF11293A_low_187
Description: NF11293A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11293A_low_187 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 3 - 248
Target Start/End: Complemental strand, 48484629 - 48484384
Alignment:
| Q |
3 |
tgaagaatcaaagatatagtcctgtagtgttgtgtgtaccgtgtcttcatatctccataatacttctgcgcttctttctcatttttgaaataacaaaaca |
102 |
Q |
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| T |
48484629 |
tgaagtatcaaagatatagtcctgcagtgttgtgtgtaccgtgtcttcatatctccataatatttctgcgcttctttctcatttttgaaataacaaaaca |
48484530 |
T |
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| Q |
103 |
aatttcttcagatcacggaacacaatccccaagctggaattcccatgaagttaaatcagaaacaggtgttttcctttttgtaaggtaagcatgcacttca |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
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| T |
48484529 |
aatttcttcagatcacggaacacaatccccaagctggaattcccatgaagttaaatcagaaacaggtgttttcctttttgcaaggtaagcatgcatttca |
48484430 |
T |
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| Q |
203 |
tatgaacttttacatactgaaacttccatttcttgtacatgatcag |
248 |
Q |
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| T |
48484429 |
tatgaacttttacatactgaaacttccatttcttgtacatgatcag |
48484384 |
T |
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