View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11293A_low_209 (Length: 243)
Name: NF11293A_low_209
Description: NF11293A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11293A_low_209 |
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Alignment Details
Target: chr7 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 19 - 193
Target Start/End: Complemental strand, 40758474 - 40758300
Alignment:
| Q |
19 |
agttactactgcggtcttgcacaaaatttgactggattttccattgtaatattttaatgttaaatctattgaaaatagattccttgtgtatacattattc |
118 |
Q |
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| T |
40758474 |
agttactactgcggtcttgcacaaaatttgactggattttccattgtaatattttaatgttaaatctattgaaaatagattccttgtgtatacattattc |
40758375 |
T |
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| Q |
119 |
tttcggtataaataacatcagcataacagttctttcaacatcaataatatcacaatgcttagagataagaatggt |
193 |
Q |
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|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||| |
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| T |
40758374 |
tttcagtataaataacatcagcataacaattctttcaacatcaataatatcacaatgcttacagataaaaatggt |
40758300 |
T |
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