View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11293A_low_288 (Length: 219)
Name: NF11293A_low_288
Description: NF11293A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11293A_low_288 |
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Alignment Details
Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 21 - 201
Target Start/End: Original strand, 28586921 - 28587101
Alignment:
| Q |
21 |
gtaatatatatggatacagaatatatggggagattggtaaaatatatgagtagattaaagctaatggtgtcatacactcatactatcatttcactaaatc |
120 |
Q |
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| T |
28586921 |
gtaatatatatggatacagaatatatggggagattggtaaaatatatcagtagattaaagttaatggtgtcatacactcatactatcatttcactaaatc |
28587020 |
T |
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| Q |
121 |
caatcatattttataaaatagaaaagttaacaagaaaaggtaaacgtttaccatatgttcccaagtatagatctctgtttc |
201 |
Q |
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| T |
28587021 |
caatcatattttataaaatagaaaagttaacaagaataggtaaacgtttaccatatgttcccaagtatagatctttgtttc |
28587101 |
T |
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